|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12070#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1712 fasta sequence
[TTCTCCCCCTCGCACGCGTGTGCGCCGTGGGCCCGCGCTTTCCCTCCCCCTCCGCGCGCCTCGCTTCTCCTTCTCCCTCGCGCACACGCGCACGCCAGCTGCGCCGCTGTCCCGCCAGCCGGCGCACTCGCTTCTCCTCCCCGCGTCGCACTGCCTCCCGCCCTCCCCCATCCCCCACGCGCCAGCCATGCCGCGGAGCTGCCTCCGGCCTCTCCCAATTCTTTCGGCGGCGGCGGCGGCGGCGGCGGCTGGACGTGCGAGCCCATCGCCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGCGGAGGAGGAGGAGGAGGCGGCGGGGGTGATGGCGCGCGGCTGCAGGGAGGGATCTCGTTCGACAAGTCCAAGGGGCAACACATCCTGCGGAATCCGGCGCTGGTGGACTCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCGGCTCGGCACGGGGAACCTCACCAAGCGGCTCCTCCAGGCCGGCGTCAAGGCCGTCGTCGCTACCCCGCATGGTTCTCGCGCTCAACCGCTGCATGGTTCCAGTTCTTTAATCGTTTTCTAAAATATATTACAAGCCTAACTAATACTACCATTCTAGGTCCCGCTAATTTTACATTACCTTTTTACTCCAGCATATGAGAGGTAAATTCCCTTAAGCAATTCACAATTCCCAACTGAATGGTTTACGGAACTTTGCTGAGATAGCAAATTGAAGGTATGCATATATGTCAAAATCACGTCTTTGCCTCTTGCGATGGCATTTGTTTTGCTGTGATCTTTGAAGGAAGTTATTCTTTTAATATATGCGTTCGTCAGTATCCAAATTAAATCCAAAAATAGTTCATAAATTTGATAGATTTGGAGAAAAGAATATTGATGCCTTCTGTTTTTTTAGTATTTCTTTATTTCTATTACTGATGTTTTCTTCCAAGCTTCACGCCAACATATATAGGAACTATGTCAGTCAGTCACAAAAGTACCGATTTTGAAACAATACTGCAGTCAGATATGCGCTCTCCATGCTGATCTCCTTCAGATTTCAGTAGCCAGAATTGATCTGTTCCCCTTCTCCTGATCGGCTGTTGAGCTACCGATCATCTCCCTCTAGGAGCAAAAGCATTTACTCACCAACAATGAGCCGTCCATTACCGGTGATTAATTCCATTTATTTCCCTCTTAAGCCTTTTTCAGTTCCTCTATAAACCACACTCCGTCGTTGTCAACTTTTAGGACTCTGAATTCATCCCCAATGCTAGCAGGGTGATCATCAGCACTGGACACCAATGGCGGAGCGCCAGAGCCTATTGGTTAGACCAGAGCAAGCCAAGCCGAGCAGGCGCCACTGGCTGGAGCTGATGGAATTACTTTGGTCCGATCCCCCCACAGGTATGATGCGCCATGTTCTTGACCTGCGTAGCCTCATCCAGAAACCAGGCTACTATTTCTGCTGCTACTACTACTACTCCAGTAAGAGTAGACGATGCTACTACTGATGATCTTGCTGTTGCCATTGCAGTATAGGAGCTGTATACCACACTGTTCAAATACTACGCAGCCTAGATTCTCCCTGCTCTTAAGCATCGTGGGTTAATCTAATCCACGATCCATTTTTATTTTTAGTCCTGATAAAACCAACAAATATTATATGCCATTGCAGTATAAGTGGTTTTCTTTGACTAAATTC]
[+] EMBL AK105534 [TTCTCCCCCTCGCACGCGTGTGCGCCGTGGGCCCGCGCTTTCCCTCCCCCTCCGCGCGCCTCGCTTCTCCTTCTCCCTCGCGCACACGCGCACGCCAGCTGCGCCGCTGTCCCGCCAGCCGGCGCACTCGCTTCTCCTCCCCGCGTCGCACTGCCTCCCGCCCTCCCCCATCCCCCACGCGCCAGCCATGCCGCGGAGCTGCCTCCGGCCTCTCCCAATTCTTTCGGCGGCGGCGGCGGCGGCGGCGGCTGGACGTGCGAGCCCATCGCCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGCGGAGGAGGAGGAGGAGGCGGCGGGGGTGATGGCGCGCGGCTGCAGGGAGGGATCTCGTTCGACAAGTCCAAGGGGCAACACATCCTGCGGAATCCGGCGCTGGTGGACTCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCGGCTCGGCACGGGGAACCTCACCAAGCGGCTCCTCCAGGCCGGCGTCAAGGCCGTCGTCGCTACCCCGCATGGTTCTCGCGCTCAACCGCTGCATGGTTCCAGTTCTTTAATCGTTTTCTAAAATATATTACAAGCCTAACTAATACTACCATTCTAGGTCCCGCTAATTTTACATTACCTTTTTACTCCAGCATATGAGAGGTAAATTCCCTTAAGCAATTCACAATTCCCAACTGAATGGTTTACGGAACTTTGCTGAGATAGCAAATTGAAGGTATGCATATATGTCAAAATCACGTCTTTGCCTCTTGCGATGGCATTTGTTTTGCTGTGATCTTTGAAGGAAGTTATTCTTTTAATATATGCGTTCGTCAGTATCCAAATTAAATCCAAAAATAGTTCATAAATTTGATAGATTTGGAGAAAAGAATATTGATGCCTTCTGTTTTTTTAGTATTTCTTTATTTCTATTACTGATGTTTTCTTCCAAGCTTCACGCCAACATATATAGGAACTATGTCAGTCAGTCACAAAAGTACCGATTTTGAAACAATACTGCAGTCAGATATGCGCTCTCCATGCTGATCTCCTTCAGATTTCAGTAGCCAGAATTGATCTGTTCCCCTTCTCCTGATCGGCTGTTGAGCTACCGATCATCTCCCTCTAGGAGCAAAAGCATTTACTCACCAACAATGAGCCGTCCATTACCGGTGATTAATTCCATTTATTTCCCTCTTAAGCCTTTTTCAGTTCCTCTATAAACCACACTCCGTCGTTGTCAACTTTTAGGACTCTGAATTCATCCCCAATGCTAGCAGGGTGATCATCAGCACTGGACACCAATGGCGGAGCGCCAGAGCCTATTGGTTAGACCAGAGCAAGCCAAGCCGAGCAGGCGCCACTGGCTGGAGCTGATGGAATTACTTTGGTCCGATCCCCCCACAGGTATGATGCGCCATGTTCTTGACCTGCGTAGCCTCATCCAGAAACCAGGCTACTATTTCTGCTGCTACTACTACTACTCCAGTAAGAGTAGACGATGCTACTACTGATGATCTTGCTGTTGCCATTGCAGTATAGGAGCTGTATACCACACTGTTCAAATACTACGCAGCCTAGATTCTCCCTGCTCTTAAGCATCGTGGGTTAATCTAATCCACGATCCATTTTTATTTTTAGTCCTGATAAAACCAACAAATATTATATGCCATTGCAGTATAAGTGGTTTTCTTTGACTAAATTC]
consensusID : consensus_12070#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1394 fasta sequence
[CAGAAGGAAGGCGAAAGCTAAGACCCCTCCCTTCCATTCTTCCCAAACCCTAGCCGCCACTTCTCTCTCCCCGCCTCCGCCCTCTCCCAATTCCTCCTCCGGCGGCGGCGGCGGCGTTGGGACGCGCGAGCCCATCACCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGAGGAGCAGGCGGCGGCGGCGGCGGCGGGGGCGGGGGCGCGCGGCTGCAGGGAGGGATCCCGTTCGAGAAGTCCAAGGGGCAGCACATCCTGCGGAACCCGGCGCTGGTGGACTCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCGGCCCCGGCACGGGTAACCTCACCAAGCGCCTCCTCCAGGCCGGCGTCAAGGCCGTCGTCGCCGTCGAGCTCGACCCCCGCATGGTTCTTGAGCTCAACCGCCGCTTCCAGGGCGACCCTCTCGCCTCACGCCTCAAGGTTATCCAAGGAGATGTCCTTAAATGTGATCTTCCATACTTTGATATCTGTGTGGCAAACATCCCATATCAAATTTCATCTCCCCTCACATTCAAGCTTCTGTCACACCGCCCAATCTTTAGGTGTGCGGTGATTATGTTTCAACGTGAATTTGCCATGAGACTTGTAGCACAGCCTGGAGATAGTCTCTACTGCCGTCTCTCTGTGAATGTGCAGCTCTTGTCACGTGTGTCACATCTCCTGAAGGTTGGACGGAACAACTTCAGGCCTCCACCCAAGGTTGATTCATCGGTTGTTCGTATCGAGCCCAGAAAGCCCCTACCTCCTGTCAGCTTC-AAAGAGTGGG--ATGGACTT-GTGAGGCTTTGTTTCAACCGGAAGAACAAGACA-TTGGGTGCCATCTTTAAGCAGAAGCGTGTCCTTGAATTGTTAGAGAAGAACTACAAGACAATGCAGTCTCTACAGCTCACCTCAGATGCAGAAAAAGGTGAGGAGAAGATGTCACCAGATGATGTTGCATTGCTATCAAGTATGGTCGAT-GACATGAACATGGAAA-GCAGCTACGAGAATGATGATGATGATGAGATGGAAATGGATGATGCCGATATGGTAGTAGAGAGCCGTGCATGTTTCAAAGAAAAGATTATGGGGATATTACAG-CAAGGAGATTTTG-CAGAGAAGAGAGCATCGAAGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAACAAAGCTGGTATACATTTTTCCTGAAGAAACCCGTTATGGTCTAGCTAGAAAAGAGTATTTTCTTTCTTTCTTAGTACGTCTTGAAAGGTGTGAAGGCA-CTGCGAGAATTTTGTTCTAACTATATATA-TTTTTATTTCTAGTATGGAAAGTAATTTAATTCAATGTTGCCTACCTCAAAAAAAAA]
[+] EMBL AK099711 [CAGAAGGAAGGCGAAAGCTAAGACCCCTCCCTTCCATTCTTCCCAAACCCTAGCCGCCACTTCTCTCTCCCCGCCTCCGCCCTCTCCCAATTCCTCCTCCGGCGGCGGCGGCGGCGTTGGGACGCGCGAGCCCATCACCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGAGGAGCAGGCGGCGGCGGCGGCGGCGGGGGCGGGGGCGCGCGGCTGCAGGGAGGGATCCCGTTCGAGAAGTCCAAGGGGCAGCACATCCTGCGGAACCCGGCGCTGGTGGACTCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCGGCCCCGGCACGGGTAACCTCACCAAGCGCCTCCTCCAGGCCGGCGTCAAGGCCGTCGTCGCCGTCGAGCTCGACCCCCGCATGGTTCTTGAGCTCAACCGCCGCTTCCAGGGCGACCCTCTCGCCTCACGCCTCAAGGTTATCCAAGGAGATGTCCTTAAATGTGATCTTCCATACTTTGATATCTGTGTGGCAAACATCCCATATCAAATTTCATCTCCCCTCACATTCAAGCTTCTGTCACACCGCCCAATCTTTAGGTGTGCGGTGATTATGTTTCAACGTGAATTTGCCATGAGACTTGTAGCACAGCCTGGAGATAGTCTCTACTGCCGTCTCTCTGTGAATGTGCAGCTCTTGTCACGTGTGTCACATCTCCTGAAGGTTGGACGGAACAACTTCAGGCCTCCACCCAAGGTTGATTCATCGGTTGTTCGTATCGAGCCCAGAAAGCCCCTACCTCCTGTCAGCTTC AAAGAGTGGG ATGGACTT GTGAGGCTTTGTTTCAACCGGAAGAACAAGACA TTGGGTGCCATCTTTAAGCAGAAGCGTGTCCTTGAATTGTTAGAGAAGAACTACAAGACAATGCAGTCTCTACAGCTCACCTCAGATGCAGAAAAAGGTGAGGAGAAGATGTCACCAGATGATGTTGCATTGCTATCAAGTATGGTCGAT GACATGAACATGGAAA GCAGCTACGAGAATGATGATGATGATGAGATGGAAATGGATGATGCCGATATGGTAGTAGAGAGCCGTGCATGTTTCAAAGAAAAGATTATGGGGATATTACAG CAAGGAGATTTTG CAGAGAAGAGAGCATCGAAGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAACAAAGCTGGTATACATTTTTCCTGAAGAAACCCGTTATGGTCTAGCTAGAAAAGAGTATTTTCTTTCTTTCTTAGTACGTCTTGAAAGGTGTGAAGGCA CTGCGAGAATTTTGTTCTAACTATATATA TTTTTATTTCTAGTATGGAAAGTAATTTAATT ]
[+] EMBL AK072957 [ CACTTCTCTCTCCCCGCCTCCGCCCTCTCCCAATTCCTCCTCCGGCGGCGGCGGCGGCGTTGGGACGCGCGAGCCCATCACCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGAGGAGCAGGCGGCGGCGGCGGCGGCGGGGGCGGGGGCGCGCGGCTGCAGGGAGGGATCCCGTTCGAGAAGTCCAAGGGGCAGCACATCCTGCGGAACCCGGCGCTGGTGGACTCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCGGCCCCGGCACGGGTAACCTCACCAAGCGCCTCCTCCAGGCCGGCGTCAAGGCCGTCGTCGCCGTCGAGCTCGACCCCCGCATGGTTCTTGAGCTCGACCGCCGCTTCCAGGGCGACCCTCTCGCCTCACGCCTCAAGGTTATCCAAGGAGATGTCCTTAAATGTGATCTTCCATACTTTGATATCTGTGTGGCAAACATCCCATATCAAATTTCATCTCCCCTCACATTCAAGCTTCTGTCACACCGCCCAATCTTTAGGTGTGCGGTGATTATGTTTCAACGTGAATTTGCCATGAGACTTGTAGCACAGCCTGGAGATAGTCTCTACTGCCGTCTCTCTGTGAATGTGCAGCTCTTGTCACGTGTGTCACACCTCCTGAAGGTTGGACGGAACAACTTCAGGCCTCCACCCAAGGTTGATTCATCGGTTGTTCGTATCGAGCCCAGAAAGCCCCTACCTCCTGTCAGCTTC AAAGAGTGGG ATGGACTT GTGAGGCTTTGTTTCAACCGGAAGAACAAGACA TTGGGTGCCATCTTTAAGCAGAAGCGTGTCCTTGAATTGTTAGAGAAGAACTACAAGACAATGCAGTCTCTACAGCTCACCTCAGATGCAGAAAAAGGTGAGGAGAAGATGTCACCAGATGATGTTGCATTGCTATCAAGTATGGTCGAT GACATGAACATGGAAA GCAGCTACGAGAATGATGATGATGATGAGATGGAAATGGATGATGCCGATATGGTAGTAGAGAGCCGTGCATGTTTCAAAGAAAAGATTATGGGGATATTACAG CAAGGAGATTTTG CAGAGAAGAGAGCATCGAAGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAACAAAGCTGGTATACATTTTTCCTGAAGAAACCCGTTATGGTCTAGCTAGAAAAGAGTATTTTCTTTCTTTCTTAGTACGTCTTGAAAGGTGTGAAGGCA CTGCGAGAATTTTGTTCTAACTATGTATA TTTTTATTTCTAGTATGGAAAGTAATTTAATT ]
[+] EMBL AU165383 [ TCCGCCCTCTCCCAATTCCTCCTCCGGCGGCGGCGGCGGCGTTGGGACGCGCGAGCCCATCACCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGAGGAGCAGGCGGCGGCGGCGGCGGCGGGGGCGGGGGCGCGCGGCTGCAGGGAGGGATCCCGTTCGAGAAGTCCAAGGGGCAGCACATCCTGCGGAACCCGGCGCTGGTGGACTCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCNGCCCCGGCAC GGTAACCTCACCAAGCGCCTCCTCCANNCCGGCGTCAAGGCCGTCGTCGCCGTCGAGCTCGACCCCCGCATGGTTCTTGAGCTCAACCGCCGCTTCCAAAGCGACCCTCT ]
[+] EMBL AU091949 [ TCCGCCCTCTCCCAATTCCTCCTCCGGCGGCGGCGGCGGCGTTGGGACGCGCGA NCCATCACCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGAGGAGCAGGCGGCGGCGGCGGCGGCGGGGGCGGGGGCGCGCGGCTGCAGGGAGGGATCCCGTTCGAGAAGTCCAAGGGGCAGCACATCCTGCGGAACCCGGCGCTGGTGGACTNCATCGTCGAGAAGGCCGGCCTNAAGCCCACCGACAACGTCCTCGAGATCGGCCCCGGCACGGTTAACCTNACCAAGCGCCTTCTTCAGGCCGGCGTCAAGGCCGTCGTCG ]
[+] EMBL AU070250 [ CTCNCCCAATTCCTCCTCCGGCGGCGGCGGCGGCGTTGGGACGCGCGA CCCATCACCATGGCGGGCGGGAAGATCCAGAAGAAGCGGCACGGCGGAGGAGCAGGCGGCGGCGGCGGCGGCGGGGGCGGGGGCGCGCGGCTGCAGGGAGGGATCCCGTTCGAGAAGTCCAAGGGGCAGCACATCCTGCGGAACCCGGCGCTGGTGGACTCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCNTCCTCGAGATCNGCCCCGGCACNGGTAACCTCACC ]
[+] EMBL BM420948 [ TCAGCTTCAAAAGAGTGGGGAATGGACTTGGTGAGGCTTTGTTTCAACCGGAAGAACAAGACACTTGGGTGCCATCTTTAAGCAGAAGCGTGT CTTGAATTGTTAGAGAAGAACTACAAGAC ATGCAGTCTCTACAGCTCACCTCAGATGCAGAAAAAGGTGAGGAGAAGATGTCACCAGATGATGTTGCATTGCTATCAAGTATGGTCGAT GACATGAACATGGAAA GCAGCTACGAGAATGATGATGATGATGAGATGGAAATGGATGATGCCGATATGGTAGTAGAGAGCCGTGCATGTTTCAAAGAAAAGATTATGGGGATATTACAG CAAGGAGATTTTGCCAGAGAAGAGAGCATCGAAGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAAC AAGCTGGTATACATTTTTCCTGAAGAAACCCGTAATGGTCTAGCTAGAAAAGAGTAGTTTCTTTCTTTCTTAGTACGTCTTGAAAGGTGTGAAGGCACCTGCGAGAATTTTGTTCTAACTATATATATTTTTTATTTCTAGTATGGAAAGTAATTTAATTCAAaa ]
[+] EMBL AU172435 [ CAGATGCAGAAAAAGGTGAGGAGAAGATGTCACCAGATGATGTTGCATTGCTATCAAGTATGGTCGAT GACATGAACATGGAAA GCAGCTACGAGAATGATGATGATGATGAGATGGAAATGGATGATGCCGATATGGTAGTAGAGAGCCGTGCATGTTTCAAAGAAAAGATTATGGGGATATTACAG CAAGGAGATTTTG CAGAGAAGAGAGCATCGAAGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAACAAAGCTGGTATACATTTTTCCTGAAGAAACCCGTTATGGTCTAGCTAGAAAAGAGTATTTTCTTTCTTTCTTAGTACGTCTTGAAAGGTGTGAAGGCA CTGCGAGAATTTTGTTCTAACTATATATA TTTTTATTTCTAGTATGGAAAGTAATTTAATTCAATGTTGCCTACCTCAAAAA ]
[+] EMBL AU182873 [ AAAAAGGTGAGGAGAAGATGTCACCAGATGATGTTGCATTGCTATCAAGTATGGTCGAT GACATGAACATGGAAA GCAGCTACGAGAATGATGATGATGATGAGATGGAAATGGATGATGCCGATATGGTAGTAGAGAGCCGTGCATGTTTCAAAGAAAAGATTATGGGGATATTACAG CAAGGAGATTTTG CAGAGAAGAGAGCATCGAAGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAACAAAGCTGGTATACATTTTTCCTGAAGAAACCCGTTATGGTCTAGCTAGAAAAGAGTATTTTCTTTCTTTCTTAGTACGTCTTGAAAGGTGTGAAGGCA CTGCGAGAATTTTGTTCTAACTATATATA TTTTTATTTCTAGTATGGAAAGTAATTTAATTCAATGTTGCCTACCTCAAAAA ]
[+] EMBL BI808041 [ GATGTCACCAGATGATGTTGCATTGCTATCAAGTATGGTCGATGGACATGAACATGGAAACCCAGCTACGAGAATGATGATGATGATGAGATGGAAATGGATGATCCCGATATGGTAGTAGAGA CCGTGCATGTTTCAAAGAAAAGATTATGGGGATATTACAGCCAAGGAGATTTTG CAGAGAAGAGAGCATCGAAGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAAC AAGCTGGTATACATTTTTCCTGAAGAAACCCGTAATGGTCTAGCTAGAAAAGAGTAGTTTCTTTCTTTCTTAGTACGTCTTGAAAGGTGTGAAGGCA CTGCGAGAATTTTGTTCTAACTATATATATTTTTTATTTCTAGTATGGAAAGTAATTTAATTCAATGTTGCCTACCTCTAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12070#0 TTCTCCCCCTCGCACGCGTGTGCGCCGTGGGCCCGCGCTTTCCCTCCCCCTCCGCGCGCC 60
consensus_12070#1 ------------------------------------------------------------
consensus_12070#0 TCGCTTCTCCTTCTCCCTCGCGCACACGCGCACGCCAGCTGCGCCGCTGTCCCGCCAGCC 120
consensus_12070#1 ---------------------------------------------------CAGAAGGAA 9
* * *
consensus_12070#0 GGCGCACTCGCTTCTCCTCCCCGCGTCGCACTGCCTCCCGCCCTCCCCCATCCCCCACGC 180
consensus_12070#1 GGCGAAA--GCTAAGACCCCTC-----------CCTTCCATTCTTCCCAAACCCTAGC-C 55
**** * *** * ** * *** ** ** *** * *** * *
consensus_12070#0 GCCAGCCATGCCGCGGAGCTGCCTCCGGCCTCTCCCAATTCTTTCGGCGGCGGCGGCGGC 240
consensus_12070#1 GCCACTTCTCTCTCC---CCGCCTCCGCCCTCTCCCAATTCCTCCTCCGGCGGCGGCGGC 112
**** * * * * ******* ************* * * *************
consensus_12070#0 GGCGGCGGCTGGACGTGCGAGCCCATCGCCATGGCGGGCGGGAAGATCCAGAAGAAGCGG 300
consensus_12070#1 GGCGTTGG---GACGCGCGAGCCCATCACCATGGCGGGCGGGAAGATCCAGAAGAAGCGG 169
**** ** **** *********** ********************************
consensus_12070#0 CACGGCGGCGGAGGAGGAGGAGGAGGCGGCGG---GGGTGATGGCGCGCGGCTGCAGGGA 357
consensus_12070#1 CACGGCGGAGGAGCAGGCGGCGGCGGCGGCGGCGGGGGCGGGGGCGCGCGGCTGCAGGGA 229
******** **** *** ** ** ******** *** * ******************
consensus_12070#0 GGGATCTCGTTCGACAAGTCCAAGGGGCAACACATCCTGCGGAATCCGGCGCTGGTGGAC 417
consensus_12070#1 GGGATCCCGTTCGAGAAGTCCAAGGGGCAGCACATCCTGCGGAACCCGGCGCTGGTGGAC 289
****** ******* ************** ************** ***************
consensus_12070#0 TCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCGGCTC-GGC 476
consensus_12070#1 TCCATCGTCGAGAAGGCCGGCCTCAAGCCCACCGACACCGTCCTCGAGATCGGCCCCGGC 349
****************************************************** * ***
consensus_12070#0 ACGGGGAACCTCACCAAGCGGCTCCTCCAGGCCGGCGTCAAGGCCGTCGTCGCTACCCCG 536
consensus_12070#1 ACGGGTAACCTCACCAAGCGCCTCCTCCAGGCCGGCGTCAAGGCCGTCGTCGCCG----- 404
***** ************** ********************************
consensus_12070#0 CATGGTTCTCGCGCTCAACCGCTGCATGGTTCC--AGTTCTTTAATCGTTTTCTAAAATA 594
consensus_12070#1 --------TCGAGCTCGACCCCCGCATGGTTCTTGAGCTCAACCGCCGCTTCCAGGGCGA 456
*** **** *** * ********* ** ** ** ** * *
consensus_12070#0 TATTACAAGCCTAACTAATACTACCATTCTAGGTCCCGCTAATTTTACATTACCTTTT-T 653
consensus_12070#1 CCCTCTCGCCTCACGCCTCAAGGTTATCCAAGGAGATGTCC-TTAAATGTGATCTTCCAT 515
* * * * ** * *** * ** * * * *** *
consensus_12070#0 ACTCCAGCATATGAGAGGTAAATTCCCTTAAGCAATTCACAATTCCCAACTGAAT--GGT 711
consensus_12070#1 ACTTTGATATCTGTGTGGCAAACATCCCATATCAAATTTCATCTCCCCTCACATTCAAGC 575
*** ** ** * ** *** ** * *** * ** **** * * * *
consensus_12070#0 TTACGGAACTTTGCTGAGATAGCAAATTGAAGGTATGCATATATGTCAAAATCACGTCTT 771
consensus_12070#1 TTCTGTCACACCGCCCAATCTTTAGGTGTGCGGT--GATTATGTTTCAA---CGTGAATT 630
** * ** ** * * * *** * *** * **** * * **
consensus_12070#0 TGCCTCTTGCGATGGCATTTGTTTTGCTGTGATCTTTGAAGGAAGTTATTCTTTTAATAT 831
consensus_12070#1 TGCC-------ATGAGACTTGTAGCACAGC-----CTGGAGATAGT--CTCTACTGCCGT 676
**** *** * **** * * ** ** *** *** * *
consensus_12070#0 ATGCGTTCGTCAGTATCCAAATTAAATCCAAAAATAGTTCATAAATTTGATAGATTTGGA 891
consensus_12070#1 CT--CTCTGTGAATGTGCAGCTCTTGTC---ACGTGTGTCACATCTCCTGAAGGTT-GGA 730
* * ** * * * ** * ** * * *** * * ** ** ***
consensus_12070#0 GAAAAGAATATTGATGCCTTCTGTTTTTTTAGTATTTCTTTATTTCTATTACTGATGTTT 951
consensus_12070#1 CGGAACAAC-TTCAGGCCTCCA-----CCCAAGGTTGATTCATC---------GGTTGTT 775
** ** ** * **** * * ** ** ** * * **
consensus_12070#0 TCTTCCAAGCTTCACGCCAACATATATAGGAACTATGTCAGTCAGTCACAAAAGTACCGA 1011
consensus_12070#1 CGTATCGAGC------CCAGAAAGCCCCTACCTCCTGTCAGCTTCAAAGAGTGGGATGGA 829
* * *** *** * ****** * * * * **
consensus_12070#0 TTT-TGAAACAATACTGCAGTCAGATATGCGCTCTCCATGCTGATCTCCTTCAGATTTCA 1070
consensus_12070#1 CTTGTGAGGCTTTGTTTCAACCGGAAGAACAAGACATTGGGTGCCATCTTTAAG----CA 885
** *** * * * ** * ** * * ** ** ** ** **
consensus_12070#0 GTAGCCAGAA-TTGATCTGTTCCCCTTCTCCTGATCGGCTGTTGAGCTACCGATCATCTC 1129
consensus_12070#1 GAAGCGTGTCCTTGAATTGTTAGAGAAGAACTACAAGACAATGCAGTCTCTA--CAGCTC 943
* *** * **** **** ** * * * ** * ** ***
consensus_12070#0 CCTCTAGGAGCAAAAGCATTTACTCACCAACAATGAGCCGTCCATTACCGGTGATTAATT 1189
consensus_12070#1 ACCTCAGATGCAGAAAAAGGTG-------AGGAGAAGATGTCACCAGATGATGTTGCATT 996
* ** *** ** * * * * ** *** * ** * ***
consensus_12070#0 CCATTTATTTCCCTCTTAAGCCTTTTTCAGTTCCTCTATAAACCACACTCCGTCGTTGTC 1249
consensus_12070#1 GCTATCAAGTATGGTCGATGACATGAACA-------TGGAAAGCA-GCTACGAGAATGAT 1048
* * * * * * * * ** * *** ** ** ** **
consensus_12070#0 AACTTTTAGGACTCTGAATTCATCCCCAATGCTAGCAGGGTGATCATCAGCACTGGACAC 1309
consensus_12070#1 GATGATGATGAGATGGAA---ATGGATGATGCCGATATGGTAGTAGAGAGCCGTGCATGT 1105
* * * ** *** ** **** * *** * *** ** *
consensus_12070#0 CAATGGCGGAGCGCCA-GAGCCTATTGGTTAGACCAGAGCAAGCCAAGCCGAGCAGGCGC 1368
consensus_12070#1 TTCAAAGAAAAGATTATGGGGATATTACAGCAAGGAGATTTTGCAGAGAAGAG--AGCAT 1163
* * * * **** * *** ** ** *** **
consensus_12070#0 CACTGGCTGGAGCTGATGGAATTACTTTGG-TCCGATCCCCCCACAGGTATGATGCGCCA 1427
consensus_12070#1 CGA-AGCTCAGCCAGGTTGACTTCTTGTACCTCCTGTCGCTCTTCAACAAAGCTGGTATA 1222
* *** * * * ** ** * * *** ** * * ** * * ** *
consensus_12070#0 TGTTCTTGACCTGCGTAGCCTCATCCAGA---AACCAGGCTACTATTTCTGCTGCTACTA 1484
consensus_12070#1 CATTTTT--CCTGAAGAAACCCGTTATGGTCTAGCTAGAAAAGAGTATTTTCTTTCTTTC 1280
** ** **** * * * * * * * ** * * * * ** *
consensus_12070#0 CTACTACTCCAGTAAGAGTAGACGATGCTACTACTGATGATCTTGCTGTTGCCATTGCAG 1544
consensus_12070#1 TTAGTACGTCTTGAAAGGTG--TGAAGGCACTGC-GAGAATTTTGTTCTAACTAT----A 1333
** *** * ** ** ** * *** * ** ** *** * * * **
consensus_12070#0 TATAGGAGCTGTATACCACACTGTTCAAATACTACGCAGCCTAGATTCTCCCTGCTCTTA 1604
consensus_12070#1 TATA---TTTTTATTTC---TAGTATGGAAAGTAATTTAATTCAATGTTGCCTACCTCAA 1387
**** * *** * ** * * ** * ** * *** * *
consensus_12070#0 AGCATCGTGGGTTAATCTAATCCACGATCCATTTTTATTTTTAGTCCTGATAAAACCAAC 1664
consensus_12070#1 AAAAAAA----------------------------------------------------- 1394
* *
consensus_12070#0 AAATATTATATGCCATTGCAGTATAAGTGGTTTTCTTTGACTAAATTC 1712
consensus_12070#1 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||