|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12075#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1547 fasta sequence
[AATTCGGCACGAGCTCGCTCTCGCTTCCGAAGCAGCGGCGGCGGCGGCGGCGAGGCGAGATGGCGGCGGCGGCGTTGGCGGGGATGGACGCGCGGGGGTGGGACGAGGCGGCGTACAGGCGGGGCATCCTGCGGGAGCGGGACCTCTCCTGCCGCACCCTCTTCCGCGCCGTCTTCTTCGACCACCACGACGACGACCCCGACGTCCTCCTCGCCGCCGCCTCCAGCGACGGCTCCCTCGCCTCCTTCTCCCTCTCCTCCTGCATCTCCTCCTCCTCCTCCCATCCCACCCCACAGACCCACCCGGATGCCGCGGTCTCTCTGGTTGATCCCGTCTGCATCGTCCAAGCGCACAGTGGCCCGGCCTACGACGTCAGGTTCTACCCGGATTCGCAGCAGCCGCTGCTCTTCAGCGGCGGGGATGACGGGCGCCTTCGGGGATGGAGATGGCACGAGATGCAGAGCTGCCTTGTGCCGCTATCTCTGCAAGGNGATCATTTGGAGCCAGTACTTGATTTGGTGAACCCTCAGCATGAGGGTCCTTGGGGTGCTCGCTCTCCAATNACCTG-AAACAACGCCATTGCGATTAACAAACAGGAAGGATCTGTTTATGCAGCGGCCGGGGATGCATGTGCTTATTGCTGGGATGTGGAGAGTGGTAAATGTAAAATGACCTTCAAGGGACATACTGACTATTTGCACAGCATTGCAGTCCGCGAAGCGAACCGCCAGGTAGTTACAGGATCAGAGGATGGCACAGCCCGTATCTGGGATTGCAGAAGTGGAAAGTGCACTCAGGTTATACGTCCGGTGAAAAACAAGATTTTTGAGGGGTCATGGGTCAGTTGTGTTGCCATTGATGCAAGTGAAAGCTGGCTGGTAGGATGCACTTCAAGCTGATATAACAATGTGTTATGCATCATGTATTTTACAGTTATTATTATCTTGGTCCTATTTTTCCCAGGCTTG-TGGTA-CTTCTAGTGGTATATCAGTTTGGAGCCTTCT-TTCAAA--TGAGTGCATCTTTAATGTGGATTGCCATGCTCCTGTTCAAGATTTGCTGTTTGACAGA-A-ACCAAATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTC-GTTTCTCTATCA-A-TGGGACTCTTCTTTCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATGGAGG-CCTTGTGGATGTAATATCACAATTTGGGAGTCATTTGTGCACTTTTGGCTG-CCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTCTTAATAGTGTAAAGAA-CTGGAAAAACACTGCCA-AGATCTAATTAAGTACTACTACTAGTAATCATACA-CTTGGGAGCTGTTCAGCTGTAACA-CTAGTTCATCTCTGTGCTAACTTATGTAATTCA-CA-GTTGT-GCCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTTAAGTTTATTGCTGTTACAATTTCCCTAATGAATTCCCTTGTACGGATTAAAAAAAAAAAAA]
[+] EMBL CA753929 [AATTCGGCACGAGCTCGCTCTCGCTTCCGAAGCAGCGGCGGCGGCGGCGGCGAGGCGAGATGGCGGCGGCGGCGTTGGCGGGGATGGACGCGCGGGGGTGGGACGAGGCGGCGTACAGGCGGGGCATCCTGCGGGAGCGGGACCTCTCCTGCCGCACCCTCTTCCGCGCCGTCTTCTTCGACCACCACGACGACGACCCCGACGTCCTCCTCGCCGCCGCCTCCAGCGACGGCTCCCTCGCCTCCTTCTCCCTCTCCTCCTGCATCTCCTCCTCCTCCTCCCATCCCACCCCACAGACCCACCCGGATGCCGCGGTCTCTCTGGTTGATCCCGTCTGCATCGTCCAAGCGCACAGTGGCCCGGCCTACGACGTCAGGTTCTACCCGGATTCGCAGCAGCCGCTGCTCTTCAGCGGCGGGGATGACGGGCGCCTTCGGGGATGGAGATGGCACGAGATGCAGAGCTGCCTTGTGCCGCTATCTCTGCAAGGNGATCATTTGGAGCCAGTACTTGATTTGGTGAACCCTCAGCATGAGGGTCCTTGGGGTGCTCGCTCTCCAATNACCTG AAACAACGCCATTGCGATT ]
[+] EMBL AK111628 [ ctcctCGA CTCGCTCTCGCTTCCGAAGCAGCGGCGGCGGCGGCGGCGAGGCGAGATGGCGGCGGCGGCGTTGGCGGGGATGGACGCGCGGGGGTGGGACGAGGCGGCGTACAGGCGGGGCATCCTGCGGGAGCGGGACCTCTCCTGCCGCACCCTCTTCCGCGCCGTCTTCTTCGACCACCACGACGACGACCCCGACGTCCTCCTCGCCGCCGCCTCCAGCGACGGCTCCCTCGCCTCCTTCTCCCTCTCCTCCTGCATCTCCTCCTCCTCCTCCCATCCCACCCCACAGACCCACCCGGATGCCGCGGTCTCTCTGGTTGATCCCGTCTGCATCGTCCAAGCGCACAGTGGCCCGGCCTACGACGTCAGGTTCTACCCGGATTCGCAGCAGCCGCTGCTCTTCAGCGGCGGGGATGACGGGCGCCTTCGGGGATGGAGATGGCACGAGATGCAGAGCTGCCTTGTGCCGCTATCTCTGCAAGGGGATCATTTGGAGCCAGTACTTGATTTGGTGAACCCTCAGCATGAGGGTCCTTGGGGTGCTCGCTCTCCAAT ACCTGAAAACAACGCCATTGCGATTAACAAACAGGAAGGATCTGTTTATGCAGCGGCCGGGGATGCATGTGCTTATTGCTGGGATGTGGAGAGTGGTAAATGTAAAATGACCTTCAAGGGACATACTGACTATTTGCACAGCATTGCAGTCCGCGAAGCGAACCGCCAGGTAGTTACAGGATCAGAGGATGGCACAGCCCGTATCTGGGATTGCAGAAGTGGAAAGTGCACTCAGGTTATACGTCCGGTGAAAAACAAGATTTTTGAGGGGTCATGGGTCAGTTGTGTTGCCATTGATGCAAGTGAAAGCTGGCTGGTAGGATGCACTTCAAGCTGATATAACAATGTGTTATGCATCATGTATTTTACAGTTATTATTATCTTGGTCCTATTTTTCCCAGGCTTG TGGTA CTTCTAGTGGTATATCAGTTTGGAGCCTTCT TTCAAA TGAGTGCATCTTTAATGTGGATTGCCATGCTCCTGTTCAAGATTTGCTGTTTGACAGA A ACCAAATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTC GTTTCTCTATCA A TGGGACTCTTCTTTCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATGGAGG CCTTGTGGATGTAATATCACAATTTGGGAGTCATTTGTGCACTTTTGGCTG CCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTCTTAATAGTGTAAAGAA CTGGAAAAACACTGCCA AGATCTAATTAAGTACTACTACTAGTAATCATACA CTTGGGAGCTGTTCAGCTGTAACA CTAGTTCATCTCTGTGCTAACTTATGTAATTCA CA GTTGT GCCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTTAAGTTTATTGCTGTTACAATTTCCCTAATGAATTCCCTTGTACGG ]
[+] EMBL BM419448 [ tCTTGTTGGTACCTTCTAGTGGTATATCAGTTTGGA CCTTCTGTTCAAAAGTGAGTGCATCTTTAATGTGGATTGCCATGCTCCTGTTCAAGATTTGCTGTTTGACAGATATACCNAATCTTAGCAGTCGTTGCTGAACCTCTGCTCTCTCTGTTTCTCTATCA AGTGGGACTCTTCTTTCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATGGAGGCCCTTGTGGATGTAATATCACAATTTGGGAGTCATTTGTGCACTTTTGGCTGCCCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTCTTAATAGTGTAAAGAACCTGGAAAAAC CTGCCA AGATCTAATTAAGTACTACTACTAGTAATCATACA CTTGGGAGCTGTTCAGCTGTAACA CTAGTTCATCTCTGTGCTAACTTATGTAATTCACCA GTTGTNCCCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTTAAGTTTATTGCNGTTACAATTTCCC ]
[+] EMBL OS0031A [ GGTA CTTCTAGTGGTATATCAGTTTGGAGCCTTCT TTCAAA TGAGTGCATCTTTAATGTGGATTGCCATGCTCCTGTTCAAGATTTGCTGTTTGACAGA A ACCAAATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTC GTTTCTCTATCA A TGGGACTCTTCTTTCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATGGAGG CCTTGTGGATGTAATATCACAATTTGGGAGTCATTTGTGCACTTTTGGCTG CCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTC ]
[+] EMBL AK111952 [ AATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTC GTTTCTCTATCA A TGGGACTCTTCTTTCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATGGAGG CCTTGTGGATGTAATATCACAATTTGGGAGTCATTTGTGCACTTTTGGCTG CCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTCTTAATAGTGTAAAGAA CTGGAAAAACACTGCCA AGATCTAATTAAGTACTACTACTAGTAATCATACA CTTGGGAGCTGTTCAGCTGTAACA CTAGTTCATCTCTGTGCTAACTTATGTAATTCA CA GTTGT GCCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTTAAaaaaaaa ]
[+] EMBL BM420673 [ taCAGTCGGT CTGAACCTCTGCTCTCTC GTTTCTCTATCACA TGGGACTCTTCTTTCACCAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATGGAGG CCTTGTGGATGTAATATCACCATTTGGGAGTCATTTGTGCACTTTTGGCTG CCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTCTTAATAGTGTAAAGAA CTGGAAAAACACTGCCANAGATCTAATTAAGTACTACTACTAGTAATCATACACCTTGGGAGCTGTTCAGCTGTAACACCTAGTTCATCTCTGTGCTAACTTATGTAATTCACCACGTTGT GCCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTTAAGTTTATTGCTGTTACCATTTCCCTAATGAATTCCCTTGTACGGATTAAAAAAAAAA ]
[+] EMBL C97864 [ TATNA A TGGGACTCTTCTTTCANAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATGGAGG CCTTGTGGATGTAATATCACAATTTGGGAGTCATTTGTGCACTTTTGGCTG CCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTCTTAATAGTGTAAAGAA CTGGAAAAACACTGCCA AGATCTAATTAAGTACTACTACTAGTAATCATACA CTTGGGAGCTGTTCAGCTGTAACA CTAGTTCATCTCTGTGCTAACTTATGTAATTCA CA GTTGT GCCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTTAAGTTTATTGCTGTTACAATTTCCCTAATGAATTCCCTTGTACGGATTAAAAAAAAAAAAA]
consensusID : consensus_12075#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 865 fasta sequence
[CAGTGCTTTTGATAGGATAATTTTGTCTTGTACTTGAAGTGTGCCTTCTCATGTTCATCCTGTTCTAACTGGTCATTTTGTATATCTGCTCGTTGATTCAAGCAAAGAAAAAGCACCAACTAGCTATTTGTCTTTTTGTACTCTTTAATTCACATCTGGTGATCTGGTCACAGGTCACGTCATATTCACAAAATTTATCCTCTCTCTTATGAGTTTACCTTCAGACAGGTTTAGAAAGATTTGGCACTACATGGAAATCCATAAAAAGGCATTCTCTTATTTCTGCTCTTTGTGCACTGCAGATTGCAGAAGTGGAAAGTGCACTCAGGTTATACGTCCGGTGAAAAACAAGATTTTTGAGGGGTCATGGGTCAGTTGTGTTGCCATTGATGCAAGTGAAAGCTGGCTGGTAGGATGCACTTCAAGCTGATATAACAATGTGTTATGCATCATGTATTTTACAGTTATTATTATCTTGGTCCTATTTTTCCCAGGCTTGTGGTACTTCTAGTGGTATATCAGTTTGGAGCCTTCTTTCAAATGAGTGCATCTTTAATGTGGATTGCCATGCTCCTGCTCAAGATTTGCTGTTTGACAGAAACCAAATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTCGNTTCTCTATCAATGGGACTCTTCTTTCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAAGGATGGCAGCTGNTGCTGGATATGGAGGCCTTGNGGATGTAATATCACAATTTGGGGAGTCATTTGGNGCACTTTTTGGCTGNCGGAGCCTGGGATAAGTAAGATCTATTGGNACAATTAGCTAAGCNCTCTTAANAGNGNAAAG]
[+] EMBL CA767427 [CAGTGCTTTTGATAGGATAATTTTGTCTTGTACTTGAAGTGTGCCTTCTCATGTTCATCCTGTTCTAACTGGTCATTTTGTATATCTGCTCGTTGATTCAAGCAAAGAAAAAGCACCAACTAGCTATTTGTCTTTTTGTACTCTTTAATTCACATCTGGTGATCTGGTCACAGGTCACGTCATATTCACAAAATTTATCCTCTCTCTTATGAGTTTACCTTCAGACAGGTTTAGAAAGATTTGGCACTACATGGAAATCCATAAAAAGGCATTCTCTTATTTCTGCTCTTTGTGCACTGCAGATTGCAGAAGTGGAAAGTGCACTCAGGTTATACGTCCGGTGAAAAACAAGATTTTTGAGGGGTCATGGGTCAGTTGTGTTGCCATTGATGCAAGTGAAAGCTGGCTGGTAGGATGCACTTCAAGCTGATATAACAATGTGTTATGCATCATGTATTTTACAGTTATTATTATCTTGGTCCTATTTTTCCCAGGCTTGTGGTACTTCTAGTGGTATATCAGTTTGGAGCCTTCTTTCAAATGAGTGCATCTTTAATGTGGATTGCCATGCTCCTGCTCAAGATTTGCTGTTTGACAGAAACCAAATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTCGNTTCTCTATCAATGGGACTCTTCTTTCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAAGGATGGCAGCTGNTGCTGGATATGGAGGCCTTGNGGATGTAATATCACAATTTGGGGAGTCATTTGGNGCACTTTTTGGCTGNCGGAGCCTGGGATAAGTAAGATCTATTGGNACAATTAGCTAAGCNCTCTTAANAGNGNAAAG]
consensusID : consensus_12075#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence
[TGGCGGCGGCGGCGTTGGCGGGGATGGACGCGCGGGGGTGGGACGANGCGGCGTNCANGCGGGGCATCCTGCGGGAGCGGGACTCTCCTGCCGCACCCTCTTCCGCGCCGTCTTCTTCGACCACCACGACGACAACCCCGACGTCCTCCTCGCCGCCGCCTCCAGCGACGGGTCCCTCGCCTCCTTCTCCCTCTCCTCCTGCATCTCCTCCTCCTCCTCCCATCCCACCCCACAGACCCACCCGGATGCCGCGGTCTCTCTGGTTGATCCCGTCTGCATCNTCCAANCGCACAATGGCCCGGCCTACCACNTCAGGTTCTNCCCGGATTCNCANCACCGCTGCTCTTCANCGGGGGGGATTAANGGCNCCTTCCGGGATGGAAATTGCCCCAAATCCNAAATTCCTTGTTCCCTATCTCTTCCANGGGATNATTTGGAACNNTTCTTGATTTTGTNNACCNCCCCNTNAAGGTTCCTNGGGGTGTCCCTCTCCCATACTTAAAACAACCCCTTGCGATTAANNAACANGAANGATNTNTTTTTTCNCNGCCGGGATGCTTTTCTTANTGCTGGGATGTTGAAAATTGT]
[+] EMBL BE229819 [TGGCGGCGGCGGCGTTGGCGGGGATGGACGCGCGGGGGTGGGACGANGCGGCGTNCANGCGGGGCATCCTGCGGGAGCGGGACTCTCCTGCCGCACCCTCTTCCGCGCCGTCTTCTTCGACCACCACGACGACAACCCCGACGTCCTCCTCGCCGCCGCCTCCAGCGACGGGTCCCTCGCCTCCTTCTCCCTCTCCTCCTGCATCTCCTCCTCCTCCTCCCATCCCACCCCACAGACCCACCCGGATGCCGCGGTCTCTCTGGTTGATCCCGTCTGCATCNTCCAANCGCACAATGGCCCGGCCTACCACNTCAGGTTCTNCCCGGATTCNCANCACCGCTGCTCTTCANCGGGGGGGATTAANGGCNCCTTCCGGGATGGAAATTGCCCCAAATCCNAAATTCCTTGTTCCCTATCTCTTCCANGGGATNATTTGGAACNNTTCTTGATTTTGTNNACCNCCCCNTNAAGGTTCCTNGGGGTGTCCCTCTCCCATACTTAAAACAACCCCTTGCGATTAANNAACANGAANGATNTNTTTTTTCNCNGCCGGGATGCTTTTCTTANTGCTGGGATGTTGAAAATTGT]
consensusID : consensus_12075#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 383 fasta sequence
[ATATAGAAATGATGCACATTGTTACTTGCTTAAAAAAAGATATCTTATTCAGTTATTCTTTCTCATCATTCTTCTTCGCAATAGGAAGGATCTGTTTATGCAGCGGCCGGGGATGCATGTGCTTATTGCTGGGATGTGGTATGTATTTTCTTGAGGAGAGTGGTAAGTGTAAAATGACCTTCAAGGGACATACTGACTATTTGCACAGCATTGCAGTCCGCGAAGCGAACCGCCAGGTAGTTACAGGATCAGAGGATGGCACAGCCCGTATCTGGGATTGCAGAAGTGGAAAGTGCACTCAGGTTATACGTCCGGTGAAAAACAAGACTTTTGAGGGGTCATGGGTCAAGTTGTGTTGCCATTGATGCAAGTGAAAGCTGGCT]
[+] EMBL BI118646 [ATATAGAAATGATGCACATTGTTACTTGCTTAAAAAAAGATATCTTATTCAGTTATTCTTTCTCATCATTCTTCTTCGCAATAGGAAGGATCTGTTTATGCAGCGGCCGGGGATGCATGTGCTTATTGCTGGGATGTGGTATGTATTTTCTTGAGGAGAGTGGTAAGTGTAAAATGACCTTCAAGGGACATACTGACTATTTGCACAGCATTGCAGTCCGCGAAGCGAACCGCCAGGTAGTTACAGGATCAGAGGATGGCACAGCCCGTATCTGGGATTGCAGAAGTGGAAAGTGCACTCAGGTTATACGTCCGGTGAAAAACAAGACTTTTGAGGGGTCATGGGTCAAGTTGTGTTGCCATTGATGCAAGTGAAAGCTGGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 AATTCGGCACGAGCTCGCTCTCGCTTCCGAAGCAGCGGCGGCGGCGGCGGCGAGGCGAGA 60
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 TGGCGGCGGCGGCGTTGGCGGGGATGGACGCGCGGGGGTGGGACGAGGCGGCGTACAGGC 120
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 GGGGCATCCTGCGGGAGCGGGACCTCTCCTGCCGCACCCTCTTCCGCGCCGTCTTCTTCG 180
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 ACCACCACGACGACGACCCCGACGTCCTCCTCGCCGCCGCCTCCAGCGACGGCTCCCTCG 240
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 CCTCCTTCTCCCTCTCCTCCTGCATCTCCTCCTCCTCCTCCCATCCCACCCCACAGACCC 300
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 ACCCGGATGCCGCGGTCTCTCTGGTTGATCCCGTCTGCATCGTCCAAGCGCACAGTGGCC 360
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 CGGCCTACGACGTCAGGTTCTACCCGGATTCGCAGCAGCCGCTGCTCTTCAGCGGCGGGG 420
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------CAGTGC 6
consensus_12075#3 -----------------------------------------------------------A 1
consensus_12075#0 ATGACGGGCGCCTTCGGGGATGGAGATGGCACGAGATGCAGAGCTGCCTTGTGCCGCTAT 480
consensus_12075#2 --------------------TGGCGGCGGCGGCGTTGGCGGGGATGGACGCGCGGGGGTG 40
consensus_12075#1 TTTTGATAGGATA-ATTT-TGT--CTTGTACTTGAAGTG-TGCCTTCTCA-TGT----TC 56
consensus_12075#3 TATAGAAATGATGCACAT-TGT--TACTTGCTTAAAAAA-AGATATCTTA-TTCAG--TT 54
consensus_12075#0 CTCTGCAAGGNGATCATT-TGGAGCCAGTACTTGATTTGGTGAACCCTCAGCATGA--GG 537
consensus_12075#2 GGACGANGCGGCGTNCANGCGGGGCATCCTGCGGGAGCGGGACTCTCCTGCCGCACCCTC 100
* * * *
consensus_12075#1 ATCCTG----TTCTAACTGGTCA---TTTTGTATATCTGCTCG-TTGATTCAA-GCAAAG 107
consensus_12075#3 ATTCT-----TTCTCATCATTCT---TCTTCGCAATAGGAAGGATCTGTTTAT-GCAGCG 105
consensus_12075#0 GTCCTTGGGGTGCTCGCTCTCCAA--TNACCTGAAACAACGCCATTGCGATTA-ACAAAC 594
consensus_12075#2 TTCCGCGCCGTCTTCTTCGACCACCACGACGACAACCCCGACGTCCTCCTCGCCGCCGCC 160
* * * * * * *
consensus_12075#1 AAAAAGCACCAACTAGCTATTTGTCTTTTTGTAC---TCTTTAATTCACATCTGGTGATC 164
consensus_12075#3 GCCGGGGATGCATGTGCTTATTGCTGGGATGTGG---TATGTATTTT---CTTGAGGAGA 159
consensus_12075#0 AGGAAGGATCTGTTTATGCAGCGGCCGGGGATGCATGTGCTTATTGCTGGGATGTGGAGA 654
consensus_12075#2 TCCAGCGACGGGTCCCTCGCCTCCTTCTCCCTCTCCTCCTGCATCTC-CTCCTCCTCCTC 219
* * * *
consensus_12075#1 TGGTCACAGGTCACGTCATATTCACAAAATTTATCCTCTCTCT-TATGAGTTTACCT--- 220
consensus_12075#3 GTGGTAAGTGTAAAATGACCTTCAAGGGACATACTGACTATTTGCACAGCATTGCAG--- 216
consensus_12075#0 GTGGTAAATGTAAAATGACCTTCAAGGGACATACTGACTATTTGCACAGCATTGCAG--- 711
consensus_12075#2 CCATCCCACCCCACA-GACCCACCCGGATGCCGCGGTCTCTCTGGTTGATCCCGTCTGCA 278
* * * ** * *
consensus_12075#1 TCAGACAGGTTTAGAAAGATTTGGC--ACTACATGGAAATCCATAAAAAGGCATTCTCTT 278
consensus_12075#3 TCCGCGAAGC---GAACCGCCAGGT--AGT---TACAGGATCAGAGGATGGCACAGCCC- 267
consensus_12075#0 TCCGCGAAGC---GAACCGCCAGGT--AGT---TACAGGATCAGAGGATGGCACAGCCC- 762
consensus_12075#2 TCNTCCAANCGCACAATGGCCCGGCCTACCACNTCAGGTTCTNCCCGGATTCNCANCACC 338
** * ** ** * * *
consensus_12075#1 ATTTCTGCTCTTTGTGCACTGCAGATTGCA------GAAGTGGAAAGTGCACTCAGGTTA 332
consensus_12075#3 GTATCTG---------------GGATTGCA------GAAGTGGAAAGTGCACTCAGGTTA 306
consensus_12075#0 GTATCTG---------------GGATTGCA------GAAGTGGAAAGTGCACTCAGGTTA 801
consensus_12075#2 GCTGCTCTTCANCGGGGGGGATTAANGGCNCCTTCCGGGATGGAAATTGC-CCCAAATCC 397
** * ** * ****** *** * ** *
consensus_12075#1 TACGTCCGGTGAAAAACAAGATTTTTGAGGGGTCAT--GGGTCA-GTTGTGTTGCCATTG 389
consensus_12075#3 TACGTCCGGTGAAAAACAAGACTTTTGAGGGGTCAT--GGGTCAAGTTGTGTTGCCATTG 364
consensus_12075#0 TACGTCCGGTGAAAAACAAGATTTTTGAGGGGTCAT--GGGTCA-GTTGTGTTGCCATTG 858
consensus_12075#2 NAAATTCCTTGTTCCCTATCTCTTCCANGGGATNATTTGGAACNNTTCTTGATTTTGTNN 457
* * * ** * ** *** * ** ** * * ** * *
consensus_12075#1 AT-GCAAGTGAAAGCTGGCTGGTAGGATGCACTTCAAGCTGATATAACAATGTGTTATGC 448
consensus_12075#3 AT-GCAAGTGAAAGCTGGCT---------------------------------------- 383
consensus_12075#0 AT-GCAAGTGAAAGCTGGCTGGTAGGATGCACTTCAAGCTGATATAACAATGTGTTATGC 917
consensus_12075#2 ACCNCCCCNTNAAGGTTCCTNGGGGTGTCCCTCTCCCATACTTAAAACAACCCCTTGCGA 517
* * *** * **
consensus_12075#1 ATCATGTATTTTACAGTTATTATTATCTTGGTCC----TATTTTTCCCAGGCTTGTGGTA 504
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 ATCATGTATTTTACAGTTATTATTATCTTGGTCC----TATTTTTCCCAGGCTTGTGGTA 973
consensus_12075#2 TTAANNAACANGAANGATNTNTTTTTTCNCNGCCGGGATGCTTTTCTTANTGCTGGGATG 577
consensus_12075#1 CTTCTAGTGGTATATCAGTTTGGAGCCTTCTTTCAAATGAGTGCATCTTTAATGTGGATT 564
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 CTTCTAGTGGTATATCAGTTTGGAGCCTTCTTTCAAATGAGTGCATCTTTAATGTGGATT 1033
consensus_12075#2 TTGAAAATTGT------------------------------------------------- 588
consensus_12075#1 GCCATGCTCCTGCTCAAGATTTGCTGTTTGACAGAAACCAAATCTTAGCAGTCGGTGCTG 624
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 GCCATGCTCCTGTTCAAGATTTGCTGTTTGACAGAAACCAAATCTTAGCAGTCGGTGCTG 1093
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 AACCTCTGCTCTCTCGNTTCTCTATCAATGGGACTCTTCTTTCACAAATCAAGTGTGCTC 684
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 AACCTCTGCTCTCTCGTTTCTCTATCAATGGGACTCTTCTTTCACAAATCAAGTGTGCTC 1153
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 CTCACTCAGCATTTTCTGTCTCCATACATTCTTCAAGGATGGCAGCTGNTGCTGGATATG 744
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 CTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATGGCAGCTGTTGCTGGATATG 1213
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 GAGGCCTTGNGGATGTAATATCACAATTTGGGGAGTCATTTGGNGCACTTTTTGGCTGNC 804
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 GAGGCCTTGTGGATGTAATATCACAATTTGGG-AGTCATTTG-TGCACTTTT-GGCTGCC 1270
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 GGAGCCTGGGATAAGTAAGATCTATTGGNACAATTAGCTAAGCNCTCTTAANAGNGNAAA 864
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 GGAGCCTGG-ATAAGTAAGATCTATTGGAACAATTAGCTAAGCACTCTTAATAGTGTAAA 1329
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 G----------------------------------------------------------- 865
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 GAACTGGAAAAACACTGCCAAGATCTAATTAAGTACTACTACTAGTAATCATACACTTGG 1389
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 GAGCTGTTCAGCTGTAACACTAGTTCATCTCTGTGCTAACTTATGTAATTCACAGTTGTG 1449
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 ------------------------------------------------------------
consensus_12075#3 ------------------------------------------------------------
consensus_12075#0 CCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTTAAGTTTATTGCTGTTACAATTTC 1509
consensus_12075#2 ------------------------------------------------------------
consensus_12075#1 --------------------------------------
consensus_12075#3 --------------------------------------
consensus_12075#0 CCTAATGAATTCCCTTGTACGGATTAAAAAAAAAAAAA 1547
consensus_12075#2 --------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||