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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12088#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1756 fasta sequence
[ATCCGATTCATCTGTCTCATCAGATCAGCGTGAAGCAGCGGCAAGAACACAAAAATGGCGGACGAGAAGCTCGCCAAGCTGCGTGAAGCCGTCGCCGGCCTCTCGCAGATCAGTGACAACGAGAAGTCCGGGTTCATCAGCCTCGTCGCCCGCTACCTCAGTGGCGAGGAGGAGCATGTGGAATGGGCAAAGATCCACACGCCGACGGACGAGGTGGTGGTGCCGTACGACACCCTGGCGGCGCCGCCGGAGGACTTGGAGGAGACCAAGAAGCTGCTCAACAAGCTCGCCGTGCTCAAGCTCAACGGCGGCCTCGGCACCACCATGGGATGCACCGGACCAAAATCGGTCATCGAAGTGCGCAACGGATTCACATTCCTCGACTTGATTGTGATCCAGATCGAGTCCCTCAACAAGAAGTATGGCAGCAATGTCCCACTGCTTCTGATGAACTCATTCAACACCCATGAAGACACCTTGAAGATTGTTGAGAAATACACCAATTCGAACATTGAAGTCCATACTTTCAATCAGAGCCAGTATCCTCGTGTGGTAGCCGATGAGTTCTTGCCATGGCCTTCCAAGGGGAAGACCTGCAAGGATGGCTGGTACCCTCCTGGCCATGGTGATATCTTCCCATCCCTGATGAACAGTGGCAAGCTTGATTTGTTACTTTCACAGGGAAAGGAGTATGTGTTCATTGCAAACTCAGATAACTTGGGTGCTATAGTGGACATGAAGATACTGAACCATTTGATCCACAAACAGAATGAATATTGCATGGAGGTTACCCCGAAAACTCTGGCTGATGTTAAAGGTGGCACACTGATCTCATATGAAGACAAGGTTCAGCTCCTGGAGATTGCACAAGTTCCTGATGCACATGTGAATGAATTCAAATCCATCGAGAAATTCAAGATCTTCAACACGAACAATCTATGGGTGAACTTGAAGGCTATCAAGCGCCTTGTTGAGGCTGATGCACTAAAGATGGAGATCATTCCAAACCCTAAGGAAGTGGATGGAGTTAAAGTTCTTCAGTTGGAAACAGCAGCTGGTGCAGCAATCA-GGTTCTTTGATCACGCAATT-GGTATCAATGTTCCAAGGTCCCGGTTCCTACCAGTGAAGGCAACATCAGATTTGCAGCTAGTACAGTCTGATCTATATACCTTGGTTGATGGCTTTGTTACACGCAACCCGGCCAGAACAAACCCATCGAATCCCTCAATTGAACT-GGGTCCAGAGTTCAAGAAGGTCGGGTGTTTCCTT-GGTCGCTTCAAGTCAATCCCCAGCATTGTTGAGCTTGACACCTTGAAGGTTTCCGGTGATGTTTGGTTTGGCTCTAGCATCACATTGAAGGGCAAGGTGACCATCACAGCCCAACCTGGTGTCAAACTGGAAATCCCAGATGGAGCAGTGATCGAGAACAAGGATATCAATGGCCCCGAGGACCTTTGAGCGAAAGGATGCAGAGTTCACAAAGAGAGATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTGTTCAACAATCAGCAAGAAAACAAAATGTTATAATTCCATTAACGTTTGTCACTAAAAAA]
[+] EMBL AK071248 [ATCCGATTCATCTGTCTCATCAGATCAGCGTGAAGCAGCGGCAAGAACACAAAAATGGCGGACGAGAAGCTCGCCAAGCTGCGTGAAGCCGTCGCCGGCCTCTCGCAGATCAGTGACAACGAGAAGTCCGGGTTCATCAGCCTCGTCGCCCGCTACCTCAGTGGCGAGGAGGAGCATGTGGAATGGGCAAAGATCCACACGCCGACGGACGAGGTGGTGGTGCCGTACGACACCCTGGCGGCGCCGCCGGAGGACTTGGAGGAGACCAAGAAGCTGCTCAACAAGCTCGCCGTGCTCAAGCTCAACGGCGGCCTCGGCACCACCATGGGATGCACCGGACCAAAATCGGTCATCGAAGTGCGCAACGGATTCACATTCCTCGACTTGATTGTGATCCAGATCGAGTCCCTCAACAAGAAGTATGGCAGCAATGTCCCACTGCTTCTGATGAACTCATTCAACACCCATGAAGACACCTTGAAGATTGTTGAGAAATACACCAATTCGAACATTGAAGTCCATACTTTCAATCAGAGCCAGTATCCTCGTGTGGTAGCCGATGAGTTCTTGCCATGGCCTTCCAAGGGGAAGACCTGCAAGGATGGCTGGTACCCTCCTGGCCATGGTGATATCTTCCCATCCCTGATGAACAGTGGCAAGCTTGATTTGTTACTTTCACAGGGAAAGGAGTATGTGTTCATTGCAAACTCAGATAACTTGGGTGCTATAGTGGACATGAAGATACTGAACCATTTGATCCACAAACAGAATGAATATTGCATGGAGGTTACCCCGAAAACTCTGGCTGATGTTAAAGGTGGCACACTGATCTCATATGAAGACAAGGTTCAGCTCCTGGAGATTGCACAAGTTCCTGATGCACATGTGAATGAATTCAAATCCATCGAGAAATTCAAGATCTTCAACACGAACAATCTATGGGTGAACTTGAAGGCTATCAAGCGCCTTGTTGAGGCTGATGCACTAAAGATGGAGATCATTCCAAACCCTAAGGAAGTGGATGGAGTTAAAGTTCTTCAGTTGGAAACAGCAGCTGGTGCAGCAATCA GGTTCTTTGATCACGCAATT GGTATCAATGTTCCAAGGTCCCGGTTCCTACCAGTGAAGGCAACATCAGATTTGCAGCTAGTACAGTCTGATCTATATACCTTGGTTGATGGCTTTGTTACACGCAACCCGGCCAGAACAAACCCATCGAATCCCTCAATTGAACT GGGTCCAGAGTTCAAGAAGGTCGGGTGTTTCCTT GGTCGCTTCAAGTCAATCCCCAGCATTGTTGAGCTTGACACCTTGAAGGTTTCCGGTGATGTTTGGTTTGGCTCTAGCATCACATTGAAGGGCAAGGTGACCATCACAGCCCAACCTGGTGTCAAACTGGAAATCCCAGATGGAGCAGTGATCGAGAACAAGGATATCAATGGCCCCGAGGACCTTTGAGCGAAAGGATGCAGAGTTCACAAAGAGAGATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTGTTCAACAATCAGCAAGAAAACAAAATGTTATAATTCCATTAACGTTTGTCACT ]
[+] EMBL AF249880 [ GTCTCATCAGATCAGCGTGAAGCAGCGGCAAGAACACAAAAATGGCGGACGAGAAGCTCGCCAAGCTGCGTGAAGCCGTCGCCGGCCTCTCGCAGATCAGTGACAACGAGAAGTCCGGGTTCATCAGCCTCGTCGCCCGCTACCTCAGTGGCGAGGAGGAGCATGTGGAATGGGCAAAGATCCACACGCCGACGGACGAGGTGGTGGTGCCGTACGACACCCTGGAGGCGCCGCCGGAGGACTTGGAGGAGACCAAGAAGCTGCTCAACAAGCTCGCCGTGCTCAAGCTCAACGGCGGCCTCGGCACCACCATGGGATGCACCGGACCAAAATCGGTCATCGAAGTGCGCAACGGATTCACATTCCTCGACTTGATTGTGATCCAGATCGAGTCCCTCAACAAGAAGTATGGCAGCAATGTCCCACTGCTTCTGATGAACTCATTCAACACCCATGAAGACACCTTGAAGATTGTTGAGAAATACACCAATTCGAACATTGAAGTCCATACTTTCAATCAGAGCCAGTATCCTCGTGTGGTAGCCGATGAGTTCTTGCCATGGCCTTCCAAGGGGAAGACCTGCAAGGATGGCTGGTACCCTCCTGGCCATGGTGATATCTTCCCATCCCTGATGAACAGTGGCAAGCTTGATTTGTTACTTTCACAGGGAAAGGAGTATGTGTTCATTGCAAACTCAGATAACTTGGGTGCTATAGTGGACATGAAGATACTGAACCATTTGATCCACAAACAGAATGAATATTGCATGGAGGTTACCCCGAAAACTCTGGCTGATGTTAAAGGTGGCACACTGATCTCATATGAAGACAAGGTTCAGCTCCTGGAGATTGCACAAGTTCCTGATGCACATGTGAATGAATTCAAATCCATCGAGAAATTCAAGATCTTCAACACGAACAATCTATGGGTGAACTTGAAGGCTATCAAGCGCCTTGTTGAGGCTGATGCACTAAAGATGGAGATCATTCCAAACCCTAAGGAAGTGGATGGAGTTAAAGTTCTTCAGTTGGAAACAGCAGCTGGTGCAGCAATCA GGTTCTTTGATCACGCAATT GGTATCAATGTTCCAAGGTCCCGGTTCCTACCAGTGAAGGCAACATCAGATTTGCAGCTAGTACAGTCTGATCTATATACCTTGGTTGATGGCTTTGTTACACGCAACCCGGCCAGAACAAACCCATCGAATCCCTCAATTGAACT GGGTCCAGAGTTCAAGAAGGTCGGGTGTTTCCTT GGTCGCTTCAAGTCAATCCCCAGCATTGTTGAGCTTGACACCTTGAAGGTTTCCGGTGATGTTTGGTTTGGCTCTAGCATCACATTGAAGGGCAAGGTGACCATCACAGCCCAACCTGGTGTCAAACTGGAAATCCCAGATGGAGCAGTGATCGAGAACAAGGATATCAATGGCCCCGAGGACCTTTGAGCGAAAGGATGCAGAGTTCACAAAGAGAGATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGA ATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTGTTCAACAATCAGCAAGAAAACAAAATGTTATAATTCaaaaaaaaa ]
[+] EMBL C93600 [ CATCAGATCAGCGTGAAGCAGCGGCAAGAACACAAAANTGGCGGACGAGAAGCTCGCCAAGCTGCGTGAAGCCGTCGCCGGCCTCTCGCAGATCAGTGACAACGAGAAGTCCGGGTTCATCAGCCTCGTCGCCCGCTACCTCAGTGGCGAGGAGGAGCATGTGGAATGGGCAAAGATCCACACGCCGACGGACGAGGTGGTGGTGCCGTACGACACCCTGGCGGCGCCGCGGAAGGACTTGGAGGAGACCAAGAAGCTGCTCAACAAGCTCGCCGTGCTCAAGCTCAACGGCGGCCTCGGCACCACCATGGGATGCACCGGNCCAAAATCGGTCATCGAAGTTCGCAACGGATTCACATTCCTCGGCTTGATTGTGA ]
[+] EMBL C72819 [ GCAGCAATCAGGGTTCTTTGATCACGCAATTGGGTATCAATGTTCCAAGGTCCCGGTTCCTACCAGTGAAGGCAACATCAGATTTGCAGCTAGTACAGTCTGATCTATATACCTTGGTTGATGGCTTTGTTACACGCAACCCGGNCAGAACAAACCCATCGAATCCCTCAATTGAACTGGGGTCCAGAGTTCAAGAAGGTCGGGTGTTTCCTTGGGTCGCTTCAAGTCAATCCCCAGCATTGTTGAGCTTGACACCTTGAAGGTTTCCGGTGATGTTTGGTTTGGCTCNAGCATCACANTGAAGGGgc ]
[+] EMBL AU085901 [ GAAGGCAACATCAGATTTGCAGCTAGTACAGTCTGATCTATATACCTTGGTTGATGNCTTTGTTAC CGCAACCCGGCCAGAACAAACCCATCGAATCCCTCAATTGAACT GGGTCCAGAGTTCAAGAAGGTCGGGTGTTTCCTT GGTCGCTTCAAGTCAATCCCCAGCATTGTTGAGCTTGACACCTTGAAGGTTTCCGGTGATGTTTGGTTTGGCTCTAGCATCACATTGAAGGGCAAGGTGACCATCACAGCCCAACCTGGTGTCAAACTGGAAATCCCAGATGGAGCAGTGATCGAGAACAAGGATATCAATGGCCCCGAGGACCTTTGAGCGAAAGGATGCAGAGTTCACAAAGAGAGATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTGTTCAACAATCAGCAAGAAAACAAAATGTTATAATTCCATTAACGTTTGTCACTAAAAAA]
consensusID : consensus_12088#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1038 fasta sequence
[GTATTCTCTCATTTCAGGATATCAATGGCCCCGAGGACCTTTGAGCGAAAGGATGCAGAGTTCACAAAGAGAGATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTCATGAAAGTTCCCCATCCATTGCAAACAAAAATGGTCATTTCTCTGCAGGAGGGACAACTTCCAAAAGCTCTATATCGAGTTCAAAAGGAGCATCAGGCGGTATCTCATTCATCCCCTTTTTCCCATATCCGAGCTCTGGAGGGACAATTACTCTCCTCTTTCCCCCCACTTTCATCCCTTCAGTTATTGTGTACATTGCGGCAGGAGGTTTCGGTGACGCCTGTGCTGAGTATAACCCATTGGCACTGTCTACAAATTCCCGCTTTCGCTCTTTCCCGGGCAGCGATCCGACACTGAACTCATAAGGCTGCGCAATACTCCGGTTCCCTGCCAGTAGTTTGGCTTCGCGGCTTGACACAGCGGTGATGCCACGGTATATGCAATCAAAATGGACCTGCACAGTTGAGCCCTTTTCAGCAGTTGGACCCTTCCCTTCAACAAGATCATAGTACTTCAGGCCATCAGGTGAAGTGACGTAGTCCTCCAGCGACACGACCATGCGGCCCCTCCGCGCGGCTAGCGAAGGCGGCGAGACGGCGATCAAGAATCCGGCGGCGGAGAGCAGCTGCGCGGCTGCCCGCCGCCGGGAGACGGCCGCGCGGAGGCAGCAGCATGCGGCGGCGCAGGCCCCTCTCGAAGGAGGTGGAGGTGCGGAGGAGGGAAGCGAGTGGCGGTAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGGAATCCAGCGGAGGAAGGGGACGGAGGAGAAGAGCCGAAATG]
[-] EMBL AK112015 [GTATTCTCTCATTTCAGGATATCAATGGCCCCGAGGACCTTTGAGCGAAAGGATGCAGAGTTCACAAAGAGAGATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTCATGAAAGTTCCCCATCCATTGCAAACAAAAATGGTCATTTCTCTGCAGGAGGGACAACTTCCAAAAGCTCTATATCGAGTTCAAAAGGAGCATCAGGCGGTATCTCATTCATCCCCTTTTTCCCATATCCGAGCTCTGGAGGGACAATTACTCTCCTCTTTCCCCCCACTTTCATCCCTTCAGTTATTGTGTACATTGCGGCAGGAGGTTTCGGTGACGCCTGTGCTGAGTATAACCCATTGGCACTGTCTACAAATTCCCGCTTTCGCTCTTTCCCGGGCAGCGATCCGACACTGAACTCATAAGGCTGCGCAATACTCCGGTTCCCTGCCAGTAGTTTGGCTTCGCGGCTTGACACAGCGGTGATGCCACGGTATATGCAATCAAAATGGACCTGCACAGTTGAGCCCTTTTCAGCAGTTGGACCCTTCCCTTCAACAAGATCATAGTACTTCAGGCCATCAGGTGAAGTGACGTAGTCCTCCAGCGACACGACCATGCGGCCCCTCCGCGCGGCTAGCGAAGGCGGCGAGACGGCGATCAAGAATCCGGCGGCGGAGAGCAGCTGCGCGGCTGCCCGCCGCCGGGAGACGGCCGCGCGGAGGCAGCAGCATGCGGCGGCGCAGGCCCCTCTCGAAGGAGGTGGAGGTGCGGAGGAGGGAAGCGAGTGGCGGTAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGGAATCCAGCGGAGGAAG ]
[-] EMBL AK111582 [ GATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTCATGAAAGTTCCCCATCCATTGCAAACAAAAATGGTCATTTCTCTGCAGGAGGGACAACTTCCAAAAGCTCTATATCGAGTTCAAAAGGAGCATCAGGCGGTATCTCATTCATCCCCTTTTTCCCATATCCGAGCTCTGGAGGGACAATTACTCTCCTCTTTCCCCCCACTTTCATCCCTTCAGTTATTGTGTACATTGCGGCAGGAGGTTTCGGTGACGCCTGTGCTGAGTATAACCCATTGGCACTGTCTACAAATTCCCGCTTTCGCTCTTTCCCGGGCAGCGATCCGACACTGAACTCATAAGGCTGCGCAATACTCCGGTTCCCTGCCAGTAGTTTGGCTTCGCGGCTTGACACAGCGGTGATGCCACGGTATATGCAATCAAAATGGACCTGCACAGTTGAGCCCTTTTCAGCAGTTGGACCCTTCCCTTCAACAAGATCATAGTACTTCAGGCCATCAGGTGAAGTGACGTAGTCCTCCAGCGACACGACCATGCGGCCCCTCCGCGCGGCTAGCGAAGGCGGCGAGACGGCGATCAAGAATCCGGCGGCGGAGAGCAGCTGCGCGGCTGCCCGCCGCCGGGAGACGGCCGCGCGGAGGCAGCAGCATGCGGCGGCGCAGGCCCCTCTCGAAGGAGGTGGAGGTGCGGAGGAGGGAAGCGAGTGGCGGTAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGGAATCCAGCGGAGGAAGGGGACGGAGGAGAAGAGCCGAAATG]
[-] EMBL AK104162 [ GATCATATCACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTGCTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAACATATTTGGTTACATATCTCATGAAAGTTCCCCATCCATTGCAAACAAAAATGGTCATTTCTCTGCAGGAGGGACAACTTCCAAAAGCTCTATATCGAGTTCAAAAGGAGCATCAGGCGGTATCTCATTCATCCCCTTTTTCCCATATCCGAGCTCTGGAGGGACAATTACTCTCCTCTTTCCCCCCACTTTCATCCCTTCAGTTATTGTGTACATTGCGGCAGGAGGTTTCGGTGACGCCTGTGCTGAGTATAACCCATTGGCACTGTCTACAAATTCCCGCTTTCGCTCTTTCCCGGGCAGCGATCCGACACTGAACTCATAAGGCTGCGCAATACTCCGGTTCCCTGCCAGTAGTTTGGCTTCGCGGCTTGACACAGCGGTGATGCCACGGTATATGCAATCAAAATGGACCTGCACAGTTGAGCCCTTTTCAGCAGTTGGACCCTTCCCTTCAACAAGATCATAGTACTTCAGGCCATCAGGTGAAGTGACGTAGTCCTCCAGCGACACGACCATGCGGCCCCTCCGCGCGGCTAGCGAAGGCGGCGAGACGGCGATCAAGAATCCGGCGGCGGAGAGCAGCTGCGCGGCTGCCCGCCGCCGGGAGACGGCCGCGCGGAGGCAGCAGCATGCGGCGGCGCAGGCCCCTCTCGAAGGAGGTGGAGGTGCGGAGGAGGGAAGCGAGTGGCGGTAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGGAATCCAGCGGAGGAAGGGGACGGAGGAGAAGAGCCGAAAT ]
[-] EMBL CF325728 [ CGAGTTCAAAAGGAGCATCAGGCGGTATCTCATTCATCCCCTTTTTCCCATATCCGAGCTCTGGAGGGACAATTACTCTCCTCTTTCCCCCCACTTTCATCCCTTCAGTTATTGTGTACATTGCGGCAGGAGGTTTCGGTGACGCCTGTGCTGAGTATAACCCATTGGCACTGTCTACAAATTCCCGCTTTCGCTCTTTCCCGGGCAGCGATCCGACACTGAACTCATAAGGCTGCGCAATACTCCGGTTCCCTGCCAGTAGTTTGGCTTCGCGGCTTGACACAGCGGTGATGCCACGGTATATGCAATCAAAATGGACCTGCACAGTTGAGCCCTTTTCAGCAGTTGGACCCTTCCCTTCAACAAGATCATAGTACTTCAGGCCATCAGGTGAAGTGACGTAGTCCTCCAGCGACACGACCATGCGGCCCCTCCGCGCGGCTAGCGAAGGCGGCGAGACGGCGATCAAGAATCCGGCGGCGGAGAGCAGCTGCGCGGCTGCCCGCCGCCGGGAGACGGCCGCGCGGAGGC ]
consensusID : consensus_12088#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 396 fasta sequence
[AAGAGCGTACGTGAAGTGACGTAGTCCGTCCAGCGACACGACCATGCGGCCCCTCCGCGCGGCTAGCGAAGGCGGCGAGACGGCGATCAAGAATCCGGCGGCGGAGAGCAGCTGCGCGGCTGCCCGCCGCCGGGAGACGGCCGCGCGGAGGCAGCAGCATGCGGCGGCGCAGGCCCCTCTCGAAGGAGGTGGAGGTGCGGAGGAGGGAAGCGAGTNGCGGTAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGGAATCCAGCGGAGGAAGGGGACGGAGGAGAAGAGCCGAAATGGCGCGCATATCATATCCATAAAGATGCTTANCTGTCTACCGAGAATAATTCAAGAAATTCAAGATTTTTCCATTTTCCATTTNAAAAAAAAAAAA]
[+] EMBL AU163904 [AAGAGCGTACGTGAAGTGACGTAGTCCGTCCAGCGACACGACCATGCGGCCCCTCCGCGCGGCTAGCGAAGGCGGCGAGACGGCGATCAAGAATCCGGCGGCGGAGAGCAGCTGCGCGGCTGCCCGCCGCCGGGAGACGGCCGCGCGGAGGCAGCAGCATGCGGCGGCGCAGGCCCCTCTCGAAGGAGGTGGAGGTGCGGAGGAGGGAAGCGAGTNGCGGTAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGGAATCCAGCGGAGGAAGGGGACGGAGGAGAAGAGCCGAAATGGCGCGCATATCATATCCATAAAGATGCTTANCTGTCTACCGAGAATAATTCAAGAAATTCAAGATTTTTCCATTTTCCATTTNAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 ATCCGATTCATCTGTCTCATCAGATCAGCGTGAAGCAGCGGCAAGAACACAAAAATGGCG 60
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GACGAGAAGCTCGCCAAGCTGCGTGAAGCCGTCGCCGGCCTCTCGCAGATCAGTGACAAC 120
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GAGAAGTCCGGGTTCATCAGCCTCGTCGCCCGCTACCTCAGTGGCGAGGAGGAGCATGTG 180
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GAATGGGCAAAGATCCACACGCCGACGGACGAGGTGGTGGTGCCGTACGACACCCTGGCG 240
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GCGCCGCCGGAGGACTTGGAGGAGACCAAGAAGCTGCTCAACAAGCTCGCCGTGCTCAAG 300
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 CTCAACGGCGGCCTCGGCACCACCATGGGATGCACCGGACCAAAATCGGTCATCGAAGTG 360
consensus_12088#1 -------------------------------------GTATTCTCTCATTTCAGGATATC 23
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 CGCAACGGATTCACATTCCTCGACTTGATTGTGATCCAGATCGAGTCCCTCAACAAGAAG 420
consensus_12088#1 AATGGCCCCGAGGACCTTTGAG--CGAAAGGATGCAGAGTTCACAAAGAGAGATCATATC 81
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 TATGGCAGCAATGTCCCACTGCTTCTGATGAACTCATTCAACACCCATGAAGACACCTTG 480
consensus_12088#1 ACCATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATAT 141
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 AAGATTGTTGAGAAATACACCAATTCGA--ACATTGAAGTCCATACTTTCAATCAGAGCC 538
consensus_12088#1 TGCTTCGGCATAAGGAA--TAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCT 199
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 AGTATCCTCGTGTGGTAGCCGATGAGTTCTTGCCATGGCCTTCCAAGGGGAAGACCTGCA 598
consensus_12088#1 TCTTGTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATA 259
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 AGGATGGCTGGTACCCTCCTGGCCATGGTGATATCTTCCCATCCCTGATGAACAGTGGCA 658
consensus_12088#1 TGAACATATTTGGTTACATATCTCATGAAAGTTCCCCATCCATTGCAAACAAAAATGGTC 319
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 AGCTTGATTTGTTACTTTCACAGGGAAAGGAGTATGTGTTCATTGCAAACTCAGATAACT 718
consensus_12088#1 ATTTCTCTGCAGGAGGGACAAC--TTCCAAAAGCTCTATATCGAGTTCAAAAGGAGCATC 377
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 TGGGTGCTATAGTGGACATGAAGATACTGAACCATTTGATCCACAAACAGAATGAATATT 778
consensus_12088#1 AGGCGGTATCTCATTCATCCCCTTTTTCCCATATCCGAGCTCTGGAGGGACAATTACTCT 437
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GCATGGAGGTTACCCCGAAAACTCTGGCTGATGTTAAAGGTGGCACACTGATCTCATATG 838
consensus_12088#1 CCTCTTTCCCCCCACTTTCATCCCTTCAGTTATTGTGTACATTGCGGCAGGAGGTTTCGG 497
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 AAGACAAGGTTCAGCTCCTGGAGATTGCACAAGTTCCTGATGCACATGTGAATGAATTCA 898
consensus_12088#1 TGACGCCTGTGCTGAGTATAACCCATTGGCACTGTCTACAAATTCCCGCTTTCGCTCTTT 557
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 -AATCCATCGAGAAATTCAAGATCTTCAACACGAACAATCTATGGGTGAACTTGAAGGCT 957
consensus_12088#1 CCCGGGCAGCGATCCGACACTGAACTCATAAGGCTGCGCAATACTCCGGTTCCCTGCCAG 617
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 ATCAAGCGCCTTGTTGAGGCTGATGCACTAAAGATGGAGATCATTCCAAACCCTAAGGAA 1017
consensus_12088#1 TAGTTTGGCTTCGCGGCTTGACACAGCGGTGATGCCACGGTATATGCAATCAAAATGGAC 677
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GTGGATGGAGTTAAAGTTCTTCAGTTGGAAACAGCAGCTGGTGCAGCAATCAGGTTCTTT 1077
consensus_12088#1 --CTGCACAGTTGAGCCC----TTTTCAGCAGTTGGACCCTTCCCTTCAACAAGATCATA 731
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GATCACGCAATTGGTATCAATGTTCCAAGGTCCCGGTTCCTACCAGTGAAGGCAACATCA 1137
consensus_12088#1 GTACTTCAGGCCATC-AGGTGAAGTGACGTAGTCC-TCCAGCGACACGAC--CATGCGGC 787
consensus_12088#2 ------AAGAGCGT--ACGTGAAGTGACGTAGTCCGTCCAGCGACACGAC--CATGCGGC 50
consensus_12088#0 GATTTGCAGCTAGTACAGTCTGATCTATATACCTTGGTTGATGGCTTTGTTACACGCAAC 1197
** * * * * ** * * ** ** *
consensus_12088#1 CCCTCCG---CGCGGCTAGCGAAGGCGGCGAGACGGC--GATCAAGAATCCGGCGGCGGA 842
consensus_12088#2 CCCTCCG---CGCGGCTAGCGAAGGCGGCGAGACGGC--GATCAAGAATCCGGCGGCGGA 105
consensus_12088#0 CCGGCCAGAACAAACCCATCGAATCCCTCAATTGAACTGGGTCCAGAGTTCAAGAAGGTC 1257
** ** * * * **** * * * * * ** *** * * *
consensus_12088#1 GAGCAGCTGCGCGGCTGCCC-------GCCGCCGG-------GAGACGGCCGCGCGGAGG 888
consensus_12088#2 GAGCAGCTGCGCGGCTGCCC-------GCCGCCGG-------GAGACGGCCGCGCGGAGG 151
consensus_12088#0 GGGTGTTTCCTTGGTCGCTTCAAGTCAATCCCCAGCATTGTTGAGCTTGACACCTTGAAG 1317
* * * * ** ** * ** * *** * * * ** *
consensus_12088#1 -----CAGCAGCATGCGGC--GGCGCAGGCCCCTC-TCGAAGGAGGTGGAGGTGCGGAGG 940
consensus_12088#2 -----CAGCAGCATGCGGC--GGCGCAGGCCCCTC-TCGAAGGAGGTGGAGGTGCGGAGG 203
consensus_12088#0 GTTTCCGGTGATGTTTGGTTTGGCTCTAGCATCACATTGAAGGGCAAGGTGACCATCACA 1377
* * * ** *** * ** * * * ***** ** * *
consensus_12088#1 AGGGAAGCGAGTGGCGG-TAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGG-- 997
consensus_12088#2 AGGGAAGCGAGTNGCGG-TAGAAGGTTCTAGAAGGGAGGGAAGAGGAAGCCATGGAGG-- 260
consensus_12088#0 GCCCAACCTGGTGTCAAACTGGAAATCCCAGATGGAGCAGTGATCGAGAACAAGGATATC 1437
** * ** * * * * * *** ** * ** ** ***
consensus_12088#1 AATCCAGCGGAGGA------AGGGGACGGAGGAGAAGAGCCGAAATG------------- 1038
consensus_12088#2 AATCCAGCGGAGGA------AGGGGACGGAGGAGAAGAGCCGAAATGGCGCGCATATCAT 314
consensus_12088#0 AATGGCCCCGAGGACCTTTGAGCGAAAGGATGCAGAGTTCACAAAGAGAGATCATATCAC 1497
*** * ***** ** * * *** * ** * ***
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ATCCATAAAGATGCTTANCTGTCTACCGAGAATAATTCAAGAAATTCAAGATTTTTCCAT 374
consensus_12088#0 CATTCCATATAATCAATCAAGCTCCACGACATTGTGGAGAATATTTTTGATCCAATATTG 1557
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 TTTCCATTTNAAAAAAAAAAAA-------------------------------------- 396
consensus_12088#0 CTTCGGCATAAGGAATAACAAAATTAGTACATGTCTTTTACCTACTTGACTTTGCTTCTT 1617
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 GTTCTATTTTCTCCTTGTGAGTGGGCAAACAAGTCATGTCCCGGCAAAATATCATATGAA 1677
consensus_12088#1 ------------------------------------------------------------
consensus_12088#2 ------------------------------------------------------------
consensus_12088#0 CATATTTGGTTACATATCTGTTCAACAATCAGCAAGAAAACAAAATGTTATAATTCCATT 1737
consensus_12088#1 -------------------
consensus_12088#2 -------------------
consensus_12088#0 AACGTTTGTCACTAAAAAA 1756
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||