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Oryza sativa
cluster # 12093 cluster # 12093       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12093#0 length = 1499 sequences # 5  
consensus_12093#1 length = 1448 sequences # 3  
consensus_12093#2 length = 1311 sequences # 1  
consensus_12093#3 length = 1098 sequences # 1  

consensusID : consensus_12093#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1499
fasta sequence
                              [CTCTCCCTGTGTCTCGTCTTCGTCTCGGCTCGTCGCCGCCCTAGGTCACAAGCAGCGCGAGCGAGGGCAAGATGATGGCAGAGGCGCTTCGGGAGGTGCTACCGCTGCCCTACTTCCCCGGGCAGCCGTGCTGGTACTTGCAGGAGCGGCGAGGTGCGGAGGCGTGGTCGGCAGAGGAGAACAAGGTGTTCGAGAGGGCCCTCGCACAGGTCGACCTGGACTCGCCGAACAGGTGGGAGATGGTCGCCGCGATGCTGCCCAGGAAGACGGTCATAGACGTGATGAACCACTACAGGGACCTCGAGAACGACGTCGGCTCCATCGAGGCAGGGCTGGTGCCGTTCCCTCACTACAGCAGCAGCTTGTCCCCGGCGTCCTCCGGGTTCACCCTGCAGGACTGGGACGGCAGCGACGGCGGGTTCAGGCGCGGCTGCTACCTCAAACGCGGCCGCGCCCCGGACCAGGAGAGGAAGAAAGGCGTCCCGTGGA-GGAGGAGGAGCACAAGTCGTTCTTGATGGGGCTGAAGAAGTACGGGAGGGGAGACTGGAGGAACATCTCGCGCTACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCGGCGGCAAGGACAAGCGCCGGTCTAGCATCCACGACATCACCACGGTCAACCTGCCAGAAGAAGACACCAGCAACCCCTCCCCATCGCCGCCGTCCGTGCTCACCACCGCCTCAGACCAGCTCGGCTCCCTCGT-GGACACGAGACCCGTTCCCCCGCCACCGTCACTCGGCGCGCAACGGCACTTCATGTCGCCGCTGCCGGGAGCGCTCGGCGTCAGCCACCACCCCTACGGCAACGTGAAGCTAGAGCCCAATGCCTCGTTCTTGGCCGGCGGCGGTACGGGGCCTGGCCTCGACGACGCCATCCTCCTGCAGATGCAATGCGGACACTTGTGACGGCGGTTCTCAGCGGCGGAGAACCGCACAAGGAGGAACACAGAGCACCGCCTCCGATCATATCTACGGGAACGACGAGGCTCCGGCCAAGTCGCAGTCCCGTGTCAGTGTGTGATTGGCTAGCCAGTTGGTTGCAGAGTTGCTTCATGCGTCTCAGGATCGCAAAGTACTGGACGGAAGGGGTAAGGGCATCAGTCCATCATCAGAGAGTGGCACAGCGTTCAGCGTACTGCCACCATCTCCCTGCAGCCGTGTCCATGGAGAGCCACGAGACGCCATCGGCGCGCAACTCCAGTGTACATAGAAAAGTATAGGGCCAGAGTACTGAAATAAGCATTTGATGAAGCCTGTGTGTTGTTTTCCAGCCACTAACCGGTTACTGTTTTGATCAGGAACACCAGGTCAGATTATAGCTATAACGGTTTTCTGATGTGCTGATGTTGTTGTAAGGCAGTTGTAGTGTACTAGTGCCCCTGTTTGGTAGTACTGGGAGCATATGCTATTCAATGCTTGTAACAAAAAAGACATA]

[+] EMBL AK111988             [CTCTCCCTGTGTCTCGTCTTCGTCTCGGCTCGTCGCCGCCCTAGGTCACAAGCAGCGCGAGCGAGGGCAAGATGATGGCAGAGGCGCTTCGGGAGGTGCTACCGCTGCCCTACTTCCCCGGGCAGCCGTGCTGGTACTTGCAGGAGCGGCGAGGTGCGGAGGCGTGGTCGGCAGAGGAGAACAAGGTGTTCGAGAGGGCCCTCGCACAGGTCGACCTGGACTCGCCGAACAGGTGGGAGATGGTCGCCGCGATGCTGCCCAGGAAGACGGTCATAGACGTGATGAACCACTACAGGGACCTCGAGAACGACGTCGGCTCCATCGAGGCAGGGCTGGTGCCGTTCCCTCACTACAGCAGCAGCTTGTCCCCGGCGTCCTCCGGGTTCACCCTGCAGGACTGGGACGGCAGCGACGGCGGGTTCAGGCGCGGCTGCTACCTCAAACGCGGCCGCGCCCCGGACCAGGAGAGGAAGAAAGGCGTCCCGTGGACGGAGGAGGAGCACAAGTCGTTCTTGATGGGGCTGAAGAAGTACGGGAGGGGAGACTGGAGGAACATCTCGCGCTACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCGGCGGCAAGGACAAGCGCCGGTCTAGCATCCACGACATCACCACGGTCAACCTGCCAGAAGAAGACACCAGCAACCCCTCCCCATCGCCGCCGTCCGTGCTCACCACCGCCTCAGACCAGCTCGGCTCCCTCGT GGACACGAGACCCGTTCCCCCGCCACCGTCACTCGGCGCGCAACGGCACTTCATGTCGCCGCTGCCGGGAGCGCTCGGCGTCAGCCACCACCCCTACGGCAACGTGAAGCTAGAGCCCAATGCCTCGTTCTTGGCCGGCGGCGGTACGGGGCCTGGCCTCGACGACGCCATCCTCCTGCAGATGCAATGCGGACACTTGTGACGGCGGTTCTCAGCGGCGGAGAACCGCACAAGGAGGAACACAGAGCACCGCCTCCGATCATATCTACGGGAACGACGAGGCTCCGGCCAAGTCGCAGTCCCGTGTCAGTGTGTGATTGGCTAGCCAGTTGGTTGCAGAGTTGCTTCATGCGTCTCAGGATCGCAAAGTACTGGACGGAAGGGGTAAGGGCATCAGTCCATCATCAGAGAGTGGCACAGCGTTCAGCGTACTGCCACCATCTCCCTGCAGCCGTGTCCATGGAGAGCCACGAGACGCCATCGGCGCGCAACTCCAGTGTACATAGAAAAGTATAGGGCCAGAGTACTGAAATAAGCATTTGATGAAGCCTGTGTGTTGTTTTCCAGCCACTAACCGGTTACTGTTTTGATCAGGAACACCAGGTCAGATTATAGCTATAACGGTTTTCTGATGTGCTGATGTTGTTGTAAGGCAGTTGTAGTGTACTAGTGCCCCTGTTTGGTAGTACTGGGAGCATATGCTATTCAATGCTT                 ]
[-] EMBL AU065164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGGACCAGGAGAGGAAGAAAGGCGTCCCGTGGA GGAGGAGGAGCACAAGTCGTTCTTGATGGGGCTGAAGAAGTACGGGAGGGGAGACTGGAGGAACATCTCGCGCTACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCGGCGGCAAGGACAAGCGCCGGTCTAGCATCCACGACATCACCACGGTCAACCTGCCAGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU070541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAGAGGAAGAAAGGCGTCCCGTGGA GNAGGAGGAGCACAAGTCGTTCTTGATGGGGCTGAAGAAGTACGGGAGGGGAGACTGGAGGAACATCTCGCGCTACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCGGCGGCAAGGACAAGCGCCGGTCTAGCATCCACGACATCACCACGGTCAACCTGCCAGAAGAAGACACCAGCAACCCCTCCCCATCGCCGCCGTCCGTGCTCACCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BE228655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCTGAAGANGTACGGGAGGGGAGACTGGAGGAACATCTCGCGCTACTTCGTGACGAGCCGGACGCCCACNCANGTGGCCNGCCNCGCGCAGAAGT NTTCATCC CCTCAACTCCGGCGGCAAGGANAAGCNCCGGTCTAACATCCACGACATCNCCACGGTCAACCTGCCANAAAAAAACACCANCAACCCCTCCCCATCGCCGCCGTCCGTGCTCNCCACCGCCTCAGACCAGCTCGGCTCCCTCGTGGGACACNAAACCCGTTCCCCCGCCGCNGTCACTCGGCGCGCAACGGCACTTCATGTC CCGCTGCCGGGAGCGCTCGGCGTCAGCCACCACCCCTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU101956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGCGTACTGCCACCATCTCCCTGCAACCGTGTCCATGGAGAGCCACGAGAC CCATCGGCGCGCAACTCCAGTGTACATAGAAAAGTATAGGGCCAGAGTACTGAAATAAGCATTTGATGAAGCCTGTGTGTTGTTTTCCAGCCACTAACCGGTTACTGTTTTGATCAGGAACACCAGGTCAGATTATAGCTATAACGGTTTTCTGATGTGCTGATGTTGTTGTAAGGCAGTTGTAGTGTACTAGTGCCCCTGTTTGGTAGTACTGGGAGCATATGCTATTCAATGCTTGTAACAAAAAAGACATA]


>consensus_12093#0 CTCTCCCTGTGTCTCGTCTTCGTCTCGGCTCGTCGCCGCCCTAGGTCACAAGCAGCGCGA GCGAGGGCAAGATGATGGCAGAGGCGCTTCGGGAGGTGCTACCGCTGCCCTACTTCCCCG GGCAGCCGTGCTGGTACTTGCAGGAGCGGCGAGGTGCGGAGGCGTGGTCGGCAGAGGAGA ACAAGGTGTTCGAGAGGGCCCTCGCACAGGTCGACCTGGACTCGCCGAACAGGTGGGAGA TGGTCGCCGCGATGCTGCCCAGGAAGACGGTCATAGACGTGATGAACCACTACAGGGACC TCGAGAACGACGTCGGCTCCATCGAGGCAGGGCTGGTGCCGTTCCCTCACTACAGCAGCA GCTTGTCCCCGGCGTCCTCCGGGTTCACCCTGCAGGACTGGGACGGCAGCGACGGCGGGT TCAGGCGCGGCTGCTACCTCAAACGCGGCCGCGCCCCGGACCAGGAGAGGAAGAAAGGCG TCCCGTGGAGGAGGAGGAGCACAAGTCGTTCTTGATGGGGCTGAAGAAGTACGGGAGGGG AGACTGGAGGAACATCTCGCGCTACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAG CCACGCGCAGAAGTACTTCATCCGCCTCAACTCCGGCGGCAAGGACAAGCGCCGGTCTAG CATCCACGACATCACCACGGTCAACCTGCCAGAAGAAGACACCAGCAACCCCTCCCCATC GCCGCCGTCCGTGCTCACCACCGCCTCAGACCAGCTCGGCTCCCTCGTGGACACGAGACC CGTTCCCCCGCCACCGTCACTCGGCGCGCAACGGCACTTCATGTCGCCGCTGCCGGGAGC GCTCGGCGTCAGCCACCACCCCTACGGCAACGTGAAGCTAGAGCCCAATGCCTCGTTCTT GGCCGGCGGCGGTACGGGGCCTGGCCTCGACGACGCCATCCTCCTGCAGATGCAATGCGG ACACTTGTGACGGCGGTTCTCAGCGGCGGAGAACCGCACAAGGAGGAACACAGAGCACCG CCTCCGATCATATCTACGGGAACGACGAGGCTCCGGCCAAGTCGCAGTCCCGTGTCAGTG TGTGATTGGCTAGCCAGTTGGTTGCAGAGTTGCTTCATGCGTCTCAGGATCGCAAAGTAC TGGACGGAAGGGGTAAGGGCATCAGTCCATCATCAGAGAGTGGCACAGCGTTCAGCGTAC TGCCACCATCTCCCTGCAGCCGTGTCCATGGAGAGCCACGAGACGCCATCGGCGCGCAAC TCCAGTGTACATAGAAAAGTATAGGGCCAGAGTACTGAAATAAGCATTTGATGAAGCCTG TGTGTTGTTTTCCAGCCACTAACCGGTTACTGTTTTGATCAGGAACACCAGGTCAGATTA TAGCTATAACGGTTTTCTGATGTGCTGATGTTGTTGTAAGGCAGTTGTAGTGTACTAGTG CCCCTGTTTGGTAGTACTGGGAGCATATGCTATTCAATGCTTGTAACAAAAAAGACATA



consensusID : consensus_12093#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1448
fasta sequence
                              [CGTACGCCGCCGCCGTCGCCGGCCGCCGCACGTCTCACCGCCGCGCGCCGGCCCAGGGAGGAGGAGGCGAGAGTGCGAGATCCACCACCCGATGACCTCCCAGGCGGCGACGACGACGACCACGGCGGCGGCGGCGGCGGCGTGGACCAGGGAGGACGACAAGGCGTTCGAGAACGCGCTCGCCGCGAGCGTGCCCGGGGCGAGGTCGGCGGAGGAGGTGCGGAGGCACTACGAGGCGCTGGTGGAGGACGTCGCGGCCATCGACGCGGGCCGCGTCCCGCTCCCGCGCTACGCCGGGGAGGAGTCCGCGGCGCCGCCCGACGGAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGGACACCGGCGCGACGAGCGCAAGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTCCAAGGCGGAGCAGGAGAGGCGCAAGGGCATCCCATGGACGGAGGAAGAGCACAGGCTGTTCTTGCTGGGGCTGGACAAGTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCCAACGCAGGTGGCGAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCATGAACCGCGACCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGCGCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGC-GGCGGCGG-CGCTGGGCCCGCCGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCGCGCCGCCGCCCATGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGCCCGCCGCCGTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTGCCCGTCGGCTACCCGGCGCCACCGGCCAAGATGCACCAATGACGCGCCATGGACGGACATGAGCAGCATTTCTTCCTCCTCCTTTCTTGATGTGAATCTTGATTTGTTCTTTG-TGTA-GTCGCCGGCTCATCGTCCCTGATCATCTTGTTCTTCTCACAATCTCACTAATGTAAACATACATAGATCAGATG-CCAAGAGTG-CAGGGATTGGGGATTAAAGGCGAATAAGTAAAGTATTTTGCTGACTGTTTGCAAGTGATCATCACGTACACCCGGTGAAAGCTTAGCTCCAAATGTGGATGTAATTAGCAGCGGCCTTCCGTACGTGGTGGCGCCGATCGATGATCTTGCAGGGGTTGC-AATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCTACTGTCTCATTGGACCAAAACATATATTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCATATATATATCAGTGTTGATGAATGGATTGGTTTTTCCCAAAAA]

[+] EMBL AK068565             [CGTACGCCGCCGCCGTCGCCGGCCGCCGCACGTCTCACCGCCGCGCGCCGGCCCAGGGAGGAGGAGGCGAGAGTGCGAGATCCACCACCCGATGACCTCCCAGGCGGCGACGACGACGACCACGGCGGCGGCGGCGGCGGCGTGGACCAGGGAGGACGACAAGGCGTTCGAGAACGCGCTCGCCGCGAGCGTGCCCGGGGCGAGGTCGGCGGAGGAGGTGCGGAGGCACTACGAGGCGCTGGTGGAGGACGTCGCGGCCATCGACGCGGGCCGCGTCCCGCTCCCGCGCTACGCCGGGGAGGAGTCCGCGGCGCCGCCCGACGGAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGGACACCGGCGCGACGAGCGCAAGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTCCAAGGCGGAGCAGGAGAGGCGCAAGGGCATCCCATGGACGGAGGAAGAGCACAGGCTGTTCTTGCTGGGGCTGGACAAGTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCCAACGCAGGTGGCGAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCATGAACCGCGACCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGCGCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGC GGCGGCGG CGCTGGGCCCGCCGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCGCGCCGCCGCCCATGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGCCCGCCGCCGTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTGCCCGTCGGCTACCCGGCGCCACCGGCCAAGATGCACCAATGACGCGCCATGGACGGACATGAGCAGCATTTCTTCCTCCTCCTTTCTTGATGTGAATCTTGATTTGTTCTTTG TGTA GTCGCCGGCTCATCGTCCCTGATCATCTTGTTCTTCTCACAATCTCACTAATGTAAACATACATAGATCAGATG CCAAGAGTG CAGGGATTGGGGATTAAAGGCGAATAAGTAAAGTATTTTGCTGACTGTTTGCAAGTGATCATCACGTACACCCGGTGAAAGCTTAGCTCCAAATGTGGATGTAATTAGCAGCGGCCTTCCGTACGTGGTGGCGCCGATCGATGATCTTGCAGGGGTTGC AATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCTACTGTC                                                                                                                                          ]
[+] EMBL CF326660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTGCTGGGGCTGGACAAGTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCCAACGCAGGTGGCGAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCATGAACCGCGACCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGCGCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGCGGGCGGCGGNCGCTGGGCCCGCCGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCGCGCCGCCGCCCATGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGCCCGCCGCCGTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTGCCCGTCCGCTACCCGGCGCCACCGGCCAAGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM038003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGATTTGTTCTTTGTTGTATGTCGCCGGCTCATCGTCCCTGATCATCTTGTTCTTCTCACAATCTCACTAATGTAAACATACATAGATCAGATGCCCAAGAGTGCCAGGGATTGGGGATTAAAGGCGAATAAGTAAAGTATTTTGCTGACTGTTTGCAAGTGGTCATCACGTACACCCGGTGAAAGCTTAGCTCCAAATGTGGATGTAATTAGCAGC GCCTTCCGTACGTGGTGGC CCGATCGATGATCTTGCA GGGTTCCAAATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCTACTGTCTCATTGGACCAAAACATATATTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCATATATATATCAGTGTTGATGAATGGATTGGTTTTTCCCAAAAA]


>consensus_12093#1 CGTACGCCGCCGCCGTCGCCGGCCGCCGCACGTCTCACCGCCGCGCGCCGGCCCAGGGAG GAGGAGGCGAGAGTGCGAGATCCACCACCCGATGACCTCCCAGGCGGCGACGACGACGAC CACGGCGGCGGCGGCGGCGGCGTGGACCAGGGAGGACGACAAGGCGTTCGAGAACGCGCT CGCCGCGAGCGTGCCCGGGGCGAGGTCGGCGGAGGAGGTGCGGAGGCACTACGAGGCGCT GGTGGAGGACGTCGCGGCCATCGACGCGGGCCGCGTCCCGCTCCCGCGCTACGCCGGGGA GGAGTCCGCGGCGCCGCCCGACGGAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGG ACACCGGCGCGACGAGCGCAAGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTC CAAGGCGGAGCAGGAGAGGCGCAAGGGCATCCCATGGACGGAGGAAGAGCACAGGCTGTT CTTGCTGGGGCTGGACAAGTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGT CATCTCGCGGACGCCAACGCAGGTGGCGAGCCACGCGCAGAAGTACTTCATCCGCCTCAA CTCCATGAACCGCGACCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGG CGATCAGGTCGCCGCGCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCC CGCGGCGGCGGCGCTGGGCCCGCCGGGCATGAAGCACCACCACCACCACCACCCGGGCGG CGCGCCGCCGCCCATGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCA CATGGTGCCCGCCGCCGTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGT CGTGCCCGTCGGCTACCCGGCGCCACCGGCCAAGATGCACCAATGACGCGCCATGGACGG ACATGAGCAGCATTTCTTCCTCCTCCTTTCTTGATGTGAATCTTGATTTGTTCTTTGTGT AGTCGCCGGCTCATCGTCCCTGATCATCTTGTTCTTCTCACAATCTCACTAATGTAAACA TACATAGATCAGATGCCAAGAGTGCAGGGATTGGGGATTAAAGGCGAATAAGTAAAGTAT TTTGCTGACTGTTTGCAAGTGATCATCACGTACACCCGGTGAAAGCTTAGCTCCAAATGT GGATGTAATTAGCAGCGGCCTTCCGTACGTGGTGGCGCCGATCGATGATCTTGCAGGGGT TGCAATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCTACTGTCTCATTGGACC AAAACATATATTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCCCATATATATATCAGTGTTGATGAATGGATTGGTTTTT CCCAAAAA



consensusID : consensus_12093#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1311
fasta sequence
                              [CCACCACCCGATGACCTCCCAGGCGGCGACGACGACGACCACGGCGGCGGCGGCGGCGGCGTGGACCAGGGAGGACGACAAGGCGTTCGAGAACGCGCTCGCGGCTTGCGCGGCGCCGCCGCCCGCGGACGGAGGCGCGCCCGACGACGACTGGTTCGCCGCGCTCGCCGCGAGCGTGCCCGGGGCGAGGTCGGCGGAGGAGGTGCGGAGGCACTACGAGGCGCTGGTGGAGGACGTCGCGGCCATCGACGCGGGCCGCGTCCCGCTCCCGCGCTACGCCGGGGAGGAGTCCGCGGCGCCGCCCGACGGAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGGACACCGGCGCGACGAGCGCAAGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTCCAAGGCGGAGCAGGAGAGGCGCAAGGGCATCCCATGGACGGAGGAAGAGCACAGGCTGTTCTTGCTGGGGCTGGACAAGTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCCAACGCAGGTGGCGAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCATGAACCGCGACCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGCGCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGCGGCGGCGGCGCTGGGCCCGCCGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCGCGCCGCCGCCCATGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGCCCGCCGCCGTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTGCCCGTCGGCTACCCGGCGCCTCCGGCCAAGATGCACCAATGACGCGCCATGGACGGACATGAGCAGCATTTCTTCCTCCTCCTTTCTTGATGTCAATCTTGATTTGTTCTTTGTGTAGTCGCCGGCTCATCGTCCCTGATCATCTTGTTCTTCTCACAATCTCACTAATGTAAACATACATAGATCAGATGCCAAGAGTGCAGGGATTGGGGATTAAAGGCGAATAAGTAAAGTATTTTGCTGACTGTTTGCAAGTGATCATCACGTACACCCGGTGAAAGCTTAGCTCCAAATGTGGATGTAATTAGCAGCGGCCTTCCGTACGTGGTGGCGCCGATCGATGATCTTGCAGGGGTTGCAATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCAACTGTCTCATTGGACCAAAAAA]

[+] EMBL AY151042             [CCACCACCCGATGACCTCCCAGGCGGCGACGACGACGACCACGGCGGCGGCGGCGGCGGCGTGGACCAGGGAGGACGACAAGGCGTTCGAGAACGCGCTCGCGGCTTGCGCGGCGCCGCCGCCCGCGGACGGAGGCGCGCCCGACGACGACTGGTTCGCCGCGCTCGCCGCGAGCGTGCCCGGGGCGAGGTCGGCGGAGGAGGTGCGGAGGCACTACGAGGCGCTGGTGGAGGACGTCGCGGCCATCGACGCGGGCCGCGTCCCGCTCCCGCGCTACGCCGGGGAGGAGTCCGCGGCGCCGCCCGACGGAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGGACACCGGCGCGACGAGCGCAAGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTCCAAGGCGGAGCAGGAGAGGCGCAAGGGCATCCCATGGACGGAGGAAGAGCACAGGCTGTTCTTGCTGGGGCTGGACAAGTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCCAACGCAGGTGGCGAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCATGAACCGCGACCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGCGCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGCGGCGGCGGCGCTGGGCCCGCCGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCGCGCCGCCGCCCATGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGCCCGCCGCCGTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTGCCCGTCGGCTACCCGGCGCCTCCGGCCAAGATGCACCAATGACGCGCCATGGACGGACATGAGCAGCATTTCTTCCTCCTCCTTTCTTGATGTCAATCTTGATTTGTTCTTTGTGTAGTCGCCGGCTCATCGTCCCTGATCATCTTGTTCTTCTCACAATCTCACTAATGTAAACATACATAGATCAGATGCCAAGAGTGCAGGGATTGGGGATTAAAGGCGAATAAGTAAAGTATTTTGCTGACTGTTTGCAAGTGATCATCACGTACACCCGGTGAAAGCTTAGCTCCAAATGTGGATGTAATTAGCAGCGGCCTTCCGTACGTGGTGGCGCCGATCGATGATCTTGCAGGGGTTGCAATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCAACTGTCTCATTGGACCAAAAAA]


>consensus_12093#2 CCACCACCCGATGACCTCCCAGGCGGCGACGACGACGACCACGGCGGCGGCGGCGGCGGC GTGGACCAGGGAGGACGACAAGGCGTTCGAGAACGCGCTCGCGGCTTGCGCGGCGCCGCC GCCCGCGGACGGAGGCGCGCCCGACGACGACTGGTTCGCCGCGCTCGCCGCGAGCGTGCC CGGGGCGAGGTCGGCGGAGGAGGTGCGGAGGCACTACGAGGCGCTGGTGGAGGACGTCGC GGCCATCGACGCGGGCCGCGTCCCGCTCCCGCGCTACGCCGGGGAGGAGTCCGCGGCGCC GCCCGACGGAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGGACACCGGCGCGACGA GCGCAAGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTCCAAGGCGGAGCAGGA GAGGCGCAAGGGCATCCCATGGACGGAGGAAGAGCACAGGCTGTTCTTGCTGGGGCTGGA CAAGTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCC AACGCAGGTGGCGAGCCACGCGCAGAAGTACTTCATCCGCCTCAACTCCATGAACCGCGA CCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGC GCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGCGGCGGCGGCGCT GGGCCCGCCGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCGCGCCGCCGCCCAT GCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGCCCGCCGC CGTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTGCCCGTCGGCTA CCCGGCGCCTCCGGCCAAGATGCACCAATGACGCGCCATGGACGGACATGAGCAGCATTT CTTCCTCCTCCTTTCTTGATGTCAATCTTGATTTGTTCTTTGTGTAGTCGCCGGCTCATC GTCCCTGATCATCTTGTTCTTCTCACAATCTCACTAATGTAAACATACATAGATCAGATG CCAAGAGTGCAGGGATTGGGGATTAAAGGCGAATAAGTAAAGTATTTTGCTGACTGTTTG CAAGTGATCATCACGTACACCCGGTGAAAGCTTAGCTCCAAATGTGGATGTAATTAGCAG CGGCCTTCCGTACGTGGTGGCGCCGATCGATGATCTTGCAGGGGTTGCAATTAGGGATTG ATTTCCATTTTGCTGATGTAAATTTGCCAACTGTCTCATTGGACCAAAAAA



consensusID : consensus_12093#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1098
fasta sequence
                              [ACGGGCGAAACCCCAACCAAGCTCCTCCTCAGCTCAGCTTCTCCTGTGCTCTGCCCTCCTCTTCTCGCAGGAGTGAGAGAAGCCGAGGAGGAGGAGGAGGAGGCTTTTGTTTGGTTGAGACGCCACAAACTCCACCAAGGGCCAATCAACGAACGCCTCGATTTCTTTTAAGCGGCGTCTCAAGGTGGAGGCCGAATCATCTGTGGCCACTTTGGCATCTGCCGGAATCGATGCTGTAGCATCCATAAATACCGCCCTTCTCTGCCGCCCCCCATCTCCCCTCCCCCTCTTCTTCCACCTCCCAAGAGCTCGCTTTTGAGAAAGAAAGGTGAAAAATCTTGGTCGGTTGGCCCGGCCAGCCAGCCAGCCGCCTCGCGGTCGCGGAGATGATGAAGGAGTCGTACATGGAGGTGCTCCCGCCGGCGCCGGCGCACTACTTCGTCGGCCAGGCTGCGGCGGCGGGCGGGTGGTTCTTGCCGGACCGGCGCGGCGGCGGCGGAGCGTGGTCGCAGGAGGAGAACAAGGTGTTCGAGCAGGCGCTGGCGGCGCTCGACCGGAACGACCCGGAGAGGTGGGAGCGGGTGGCGCTGCTGCTGCCCGGCAAGACGGTGGCCGACGTCATGACGCACTACGACGACCTCGAGAACGACGTCTGCTTCATCGAGGCCGGCCTCGTCCCCTTCCCCCACTACGGCGCCGCCGGCGGCGGCGGCGGCTCCGGGTTCACTCTTGACTGGGACGGCGGCGATGACCCCGCCGGCCTTGGGTTCAAGCGCTCCTGCTACATGGTCGGCGGCAAGCGCGCGCGCGGCCCTGACCAGGAGCGCAAGAAGGGCGTGCCGTGGACAGAGGAGGAGCACAAGTTGTTCTTGATGGGGCTGAAGAAGTACGGCAGAGGTGACTGGAGGAACATCTCCCGCAACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGGCTCAACTCCGGCGGCAAGGACAAGCGCCGCTCCAGCATCCACGACATCACCACCGTCAACCTCCCCGACGACGACCACGGCAACCCCTCGCCGTCGCCGCCGCCGTCCGTGCTCA]

[+] EMBL AK068138             [ACGGGCGAAACCCCAACCAAGCTCCTCCTCAGCTCAGCTTCTCCTGTGCTCTGCCCTCCTCTTCTCGCAGGAGTGAGAGAAGCCGAGGAGGAGGAGGAGGAGGCTTTTGTTTGGTTGAGACGCCACAAACTCCACCAAGGGCCAATCAACGAACGCCTCGATTTCTTTTAAGCGGCGTCTCAAGGTGGAGGCCGAATCATCTGTGGCCACTTTGGCATCTGCCGGAATCGATGCTGTAGCATCCATAAATACCGCCCTTCTCTGCCGCCCCCCATCTCCCCTCCCCCTCTTCTTCCACCTCCCAAGAGCTCGCTTTTGAGAAAGAAAGGTGAAAAATCTTGGTCGGTTGGCCCGGCCAGCCAGCCAGCCGCCTCGCGGTCGCGGAGATGATGAAGGAGTCGTACATGGAGGTGCTCCCGCCGGCGCCGGCGCACTACTTCGTCGGCCAGGCTGCGGCGGCGGGCGGGTGGTTCTTGCCGGACCGGCGCGGCGGCGGCGGAGCGTGGTCGCAGGAGGAGAACAAGGTGTTCGAGCAGGCGCTGGCGGCGCTCGACCGGAACGACCCGGAGAGGTGGGAGCGGGTGGCGCTGCTGCTGCCCGGCAAGACGGTGGCCGACGTCATGACGCACTACGACGACCTCGAGAACGACGTCTGCTTCATCGAGGCCGGCCTCGTCCCCTTCCCCCACTACGGCGCCGCCGGCGGCGGCGGCGGCTCCGGGTTCACTCTTGACTGGGACGGCGGCGATGACCCCGCCGGCCTTGGGTTCAAGCGCTCCTGCTACATGGTCGGCGGCAAGCGCGCGCGCGGCCCTGACCAGGAGCGCAAGAAGGGCGTGCCGTGGACAGAGGAGGAGCACAAGTTGTTCTTGATGGGGCTGAAGAAGTACGGCAGAGGTGACTGGAGGAACATCTCCCGCAACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGGCTCAACTCCGGCGGCAAGGACAAGCGCCGCTCCAGCATCCACGACATCACCACCGTCAACCTCCCCGACGACGACCACGGCAACCCCTCGCCGTCGCCGCCGCCGTCCGTGCTCA]


>consensus_12093#3 ACGGGCGAAACCCCAACCAAGCTCCTCCTCAGCTCAGCTTCTCCTGTGCTCTGCCCTCCT CTTCTCGCAGGAGTGAGAGAAGCCGAGGAGGAGGAGGAGGAGGCTTTTGTTTGGTTGAGA CGCCACAAACTCCACCAAGGGCCAATCAACGAACGCCTCGATTTCTTTTAAGCGGCGTCT CAAGGTGGAGGCCGAATCATCTGTGGCCACTTTGGCATCTGCCGGAATCGATGCTGTAGC ATCCATAAATACCGCCCTTCTCTGCCGCCCCCCATCTCCCCTCCCCCTCTTCTTCCACCT CCCAAGAGCTCGCTTTTGAGAAAGAAAGGTGAAAAATCTTGGTCGGTTGGCCCGGCCAGC CAGCCAGCCGCCTCGCGGTCGCGGAGATGATGAAGGAGTCGTACATGGAGGTGCTCCCGC CGGCGCCGGCGCACTACTTCGTCGGCCAGGCTGCGGCGGCGGGCGGGTGGTTCTTGCCGG ACCGGCGCGGCGGCGGCGGAGCGTGGTCGCAGGAGGAGAACAAGGTGTTCGAGCAGGCGC TGGCGGCGCTCGACCGGAACGACCCGGAGAGGTGGGAGCGGGTGGCGCTGCTGCTGCCCG GCAAGACGGTGGCCGACGTCATGACGCACTACGACGACCTCGAGAACGACGTCTGCTTCA TCGAGGCCGGCCTCGTCCCCTTCCCCCACTACGGCGCCGCCGGCGGCGGCGGCGGCTCCG GGTTCACTCTTGACTGGGACGGCGGCGATGACCCCGCCGGCCTTGGGTTCAAGCGCTCCT GCTACATGGTCGGCGGCAAGCGCGCGCGCGGCCCTGACCAGGAGCGCAAGAAGGGCGTGC CGTGGACAGAGGAGGAGCACAAGTTGTTCTTGATGGGGCTGAAGAAGTACGGCAGAGGTG ACTGGAGGAACATCTCCCGCAACTTCGTGACGAGCCGGACGCCGACGCAGGTGGCCAGCC ACGCGCAGAAGTACTTCATCCGGCTCAACTCCGGCGGCAAGGACAAGCGCCGCTCCAGCA TCCACGACATCACCACCGTCAACCTCCCCGACGACGACCACGGCAACCCCTCGCCGTCGC CGCCGCCGTCCGTGCTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12093#0      CTCTCCCTGTGTCTCGTCTTCGTCTCGGCTCGTCGCCGCCCTAGGTCACAAGCAGCGCGA 60
consensus_12093#3      ------------------------------------------------------------
consensus_12093#1      --------------CGTACGCCGCCGCCGTCGCCGGCCGCCGCACGTCTCACCGCCGCGC 46
consensus_12093#2      -----------------------------CCACCACCCGATGACCTCCCAGGCGGCG-AC 30
                                                                                   

consensus_12093#0      GCGAGGGCAAGATGATGGCAGAGGCGCTTCGGGAGGTGCTACCGCTGCCCTACTTCCCCG 120
consensus_12093#3      --------------ACGGGCGAAAC-CCCAACCAAGCTCCTCCTCAGCTCAGCTTCTCCT 45
consensus_12093#1      GCCGGC---CCAGGGAGGAGGAGGCGAGAGTGCGAGATCCACCACCCGATGA--CCTCCC 101
consensus_12093#2      GACGACG-ACCACGGCGGCGGCGGCGGCGGCGTGGACCAGGGAGGACGACAAGGCGTTCG 89
                                       **  *   *                                 * 

consensus_12093#0      GGCAGCCGTGCTGGTA--CTTGCAGGAGCGGCGAGGTGCGGAGGCGTGGTCGGCAGAGGA 178
consensus_12093#3      GTGCTCTGCCCTCCTCTTCTCGCAGGAGTGA-GAGAAGCCGAGGAGGA---GGAGGAGGA 101
consensus_12093#1      AGGCGGCGACGACGACG-ACCACGGCGGCGGCG----GCGGCGGCGTGGACCAGGGAGGA 156
consensus_12093#2      AGAACGCGCTCGCGGCT-TGCGCGGCGCCGCCG----CCCGCGGACGGAGGCGCGCCCGA 144
                              *              * *    *  *     * * **              **

consensus_12093#0      GAACAAGGTGTTCGAGAGGGCCCTCGCACAGGTCGACCTGGACTCGCCGAACAGGTGGGA 238
consensus_12093#3      GGCTTT--TGTTTGGTTGAGACGCCACA-AACTCCACCAAGGGCCAATCAACGAACGCCT 158
consensus_12093#1      CGACAAGGCGTTCGAGAACGCGCTCGC-------CGCGAGCGTGCCCGGGGCGAGGTCGG 209
consensus_12093#2      CGACGACTGGTTCGC---CGCGCTCGC-------CGCGAGCGTGCCCGGGGCGAGGTCGG 194
                                *** *     *    * *         *       *      *        

consensus_12093#0      -GATGGTCGCCGCGATGCTGCCCAGGAAGACGGTCATAGACGTGATGAACCACTACAGGG 297
consensus_12093#3      CGATTTCTTTTAAGCGGCGTCTCAAGGTGGAGGCCG-AATCATCTGTGGCCACTTTGGCA 217
consensus_12093#1      CGGAGGAGGTGCGGAGGCACTACGAGGCGCTGGTGGAGGACGTCGCGGCCATCGACGCGG 269
consensus_12093#2      CGGAGGAGGTGCGGAGGCACTACGAGGCGCTGGTGGAGGACGTCGCGGCCATCGACGCGG 254
                        *           *  **    *  *  *  **       * *      *  *       

consensus_12093#0      ACCTCGAGAA-CGACGTCG--GC-TCCATCGAGGCAGGGCTGGT--GCCGTTCCCTCACT 351
consensus_12093#3      TCTGCCGGAATCGATGCTGTAGCATCCATAAATACCGCCCTTCTCTGCCGC-CCCCCATC 276
consensus_12093#1      GCCGC--GTCCCGCTCCCGC-GC-TACGCCGGGGAGGAGTCCGC--GGCGCCGCCCGACG 323
consensus_12093#2      GCCGC--GTCCCGCTCCCGC-GC-TACGCCGGGGAGGAGTCCGC--GGCGCCGCCCGACG 308
                        *  *  *   **     *  ** * *         *         * **   **  *  

consensus_12093#0      ACAGCAGCAGCTTGTCCCCGGCGTCCTCCGGGTTCACCCTGCAGGACTGGGACGGCAGCG 411
consensus_12093#3      TCCCCTCCCCCTCTTCTTCCACCTCCCAAGAGCTCGCTTTTGAGAA---AGAAAGGTGAA 333
consensus_12093#1      GAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGGACACCGGCGC---GACGAGCGCA 380
consensus_12093#2      GAGCCGGAGCCGCCGCCGCCGCGTCCAAGGACGGCGGACACCGGCGC---GACGAGCGCA 365
                           *     *    *  *  * ***   *    *        *      **     *  

consensus_12093#0      ACGGCGGGTTCAGGCGCGGCTGCTACCTCAAACGCGGCCGCGCCCCGGACCAGGAGAGGA 471
consensus_12093#3      AAATCTTGGTCGGTTGGCCCGGCCAGCC---AGCCAGCCGCCTCGCGGTCGCGGAGATGA 390
consensus_12093#1      AGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTCCAAGGCGGAGCAGGAGAGGC 440
consensus_12093#2      AGGGCGGCGGCGGCGGGTACGACGGCGGCAAGAGCTGCTCCAAGGCGGAGCAGGAGAGGC 425
                       *   *     * *  *   *  *           * **  *    ***    ***** * 

consensus_12093#0      AGAAAG-GCGTCCCGTGGA-GGAGGAGGAGCACAAGTCGTT-CTTGATGGGGCTGAAGAA 528
consensus_12093#3      TGAAGGAGTCGTACATGGA-GGTGCTCCCGCCGGCGCCGGCGCACTACTTCGTCGGCCAG 449
consensus_12093#1      GCAAGG-GCATCCCATGGACGGAGGAAGAGCACAGGCTGTT-CTTGCTGGGGCTGGACAA 498
consensus_12093#2      GCAAGG-GCATCCCATGGACGGAGGAAGAGCACAGGCTGTT-CTTGCTGGGGCTGGACAA 483
                         ** * *     * **** ** *     **    *  *   *        *  *   * 

consensus_12093#0      GTACGGGAGGGGAGACTGGAGGAACATCTCGCGCTACTTCGTGACGAGCCGGACGCCGAC 588
consensus_12093#3      GC-TGCGGCGGCGGGCGGGTGGTTCTTGCCGGACCGGCGCGGCGGCGGCGGAGCGTGGTC 508
consensus_12093#1      GTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCCAAC 558
consensus_12093#2      GTTCGGCAAGGGGGACTGGCGGAGCATCTCGCGCAACTTCGTCATCTCGCGGACGCCAAC 543
                       *   *    **  * * ** **  * *  **  *     **         *  **    *

consensus_12093#0      GCAGGTGGCCAGCCACGCGCAGAAGTA--CTTCATCCGC-CTCAACTCCGGCGGCAAGGA 645
consensus_12093#3      GCAGGAGGAGAACAAGGTGTTCGAGCAGGCGCTGGCGGCGCTCGACCGGAACGACCCGGA 568
consensus_12093#1      GCAGGTGGCGAGCCACGCGCAGAAGTA--CTTCATCCGC-CTCAACTCCATGAACCGCGA 615
consensus_12093#2      GCAGGTGGCGAGCCACGCGCAGAAGTA--CTTCATCCGC-CTCAACTCCATGAACCGCGA 600
                       ***** **  * * * * *    ** *  *     * ** *** **        *   **

consensus_12093#0      CAAGCGCCGGTCTAGCATCCACGACATCACCACGGTCAAC--CTGCCAGAAGAAGACACC 703
consensus_12093#3      GAGGTG--GG---AGCG-----GGTGGCGCTGCTGCTGCC--CGGCAAGACGGTGGCCGA 616
consensus_12093#1      CCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGC 675
consensus_12093#2      CCGCCGCCGCTCCAGCATCCACGACATCACCAGCGTCACCGCCGGCGATCAGGTCGCCGC 660
                            *  *    ***      *    * *    *    *  * ** *   *    *   

consensus_12093#0      --AGCAACCCCTCCCCATCGCCGCCGTCCGTGCTCACCACCGCCTCAGA-CCAGCTCGGC 760
consensus_12093#3      --CGTCATGACGCACTA-CGACGACCTCGAGAACGACGTCTGCTTCAT--CGAGGCCGGC 671
consensus_12093#1      GCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGCGGCGGCGGCGCT 735
consensus_12093#2      GCAGCAGGGCGCCCCGATCACCGGCCACCAGGCCACGGGCAACCCCGCGGCGGCGGCGCT 720
                          *        * * * *  ** *  *           *  *  *    *     **  

consensus_12093#0      TCCCTCGTGGACACGAGACCCGTTCCCCCGCCACCGTCACTCGGCGCGCAACGGCACTTC 820
consensus_12093#3      ---CTCGT----------CCCCTTCCCCCACTACGGCGCCGCCGGCGGCGGCGGCGGCTC 718
consensus_12093#1      GGGCCCGC---CGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCG-CGCCGCCGC 791
consensus_12093#2      GGGCCCGC---CGGGCATGAAGCACCACCACCACCACCACCCGGGCGGCG-CGCCGCCGC 776
                          * **                 ** ** * **     * * *   **  ** *    *

consensus_12093#0      ATG--TCGCCGCTGCCGGGAGCGCTCGGCGTCAGCCACCACCCCTACGGCAACGTGAAGC 878
consensus_12093#3      CGGGTTCACTCTTGACTGG-------GACGGCGGCGATGACCCC---GCCGGCCTTGGGT 768
consensus_12093#1      CCA---TGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGC 848
consensus_12093#2      CCA---TGCCCATGTACAGCGCCGCGCCCATGGGCCACCCCGTCGCCGGCCACATGGTGC 833
                               *   **    *         *    ** *   *  *   * *  * *   * 

consensus_12093#0      TAGAGCCCAATGCCTCGTTCTTGGCCGGCGGCGGTACGGGGCCTGGCCTCG-ACGACGCC 937
consensus_12093#3      TCAAGCGC---TCCTGCTACATGGTCGGCGGCAAGCGCGCGCGCGGCCCTG-ACCAGGAG 824
consensus_12093#1      CCGCCGCC----GTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTG 904
consensus_12093#2      CCGCCGCC----GTCGGCACGCCGGTGGTGTTCCCGCCGGGCCACGCGCCGTACGTCGTG 889
                              *           *   *  ** *        * **   **   * **   *  

consensus_12093#0      ATCCTCCTGCAGATGCAATGCGGACACTTGTGACGGCGGTTCTCAGCGGCGGAGAACCGC 997
consensus_12093#3      CGCAAGAAGGGCGTGCCGTGGACAGAGGAGGAGCACAAGTTGTTCTTGATGGGG-----C 879
consensus_12093#1      CCCGTCGGCTACCCGGCGCCACCGGCCAAGATGCACCAATGACGCGCCATGGACGG--AC 962
consensus_12093#2      CCCGTCGGCTACCCGGCGCCTCCGGCCAAGATGCACCAATGACGCGCCATGGACGG--AC 947
                         *           *              *   *     *          **       *

consensus_12093#0      ACAAGGAGGAACACAGAGCACCGCCTCCGATCATATCTACGGGAACGACGAGGCTCCGGC 1057
consensus_12093#3      TGAAGAAGTACGGCAGAGG--TGACTGGAGGAACATCTCCCGCAAC-------TTCGTGA 930
consensus_12093#1      ATGAGCAGCATTTCTTCCT-CCTCCTTTCTTGATGTGAATCTTGATTT---GTTCTTTGT 1018
consensus_12093#2      ATGAGCAGCATTTCTTCCT-CCTCCTTTCTTGATGTCAATCTTGATTT---GTTCTTTGT 1003
                          ** ** *   *          **      *  *        *             * 

consensus_12093#0      CAAGTCGCAGTCCCGT-GTCAGTGTGTGATTGGCTAGCCAGTTGGTTGCAGAGTTGC-TT 1115
consensus_12093#3      CGAGCCGGACGCCGAC-GCAGGTG------------GCCAGCCACGCGCAGAAGTAC-TT 976
consensus_12093#1      GTAGTCGCCGGCTCATCGTCCCTG--------ATCATCTTGTTCTTCTCACAATCTCACT 1070
consensus_12093#2      GTAGTCGCCGGCTCATCGTCCCTG--------ATCATCTTGTTCTTCTCACAATCTCACT 1055
                         ** **    *     *    **             *  *       ** *    *  *

consensus_12093#0      CATGCGTCTCAGGATCGCAAAGTACTGGACGGAAGGGGTAAGGGCATCAGTCCATCATCA 1175
consensus_12093#3      CATCCGGCTCAACTCCG-----------GCGGCAAGGACAA--GCGCCGCTCCAGCATC- 1022
consensus_12093#1      AATGTAAACATACATAG------ATCAGATGCCAAGAGTGCAGGGATTGGGGATTAAAGG 1124
consensus_12093#2      AATGTAAACATACATAG------ATCAGATGCCAAGAGTGCAGGGATTGGGGATTAAAGG 1109
                        **             *             *  * *       *            *   

consensus_12093#0      GAGAGTGGCACAGCGTTCAGCGTACTGCCACCATCTCCCTGCAGCC-GTGTCCATGGAGA 1234
consensus_12093#3      --------CACGACATC------ACCACCGTCAACCTCCC-CGACG-ACGACCACGGCAA 1066
consensus_12093#1      CGAATAAGTAAAGTATTTTGCTGACTGTTTGCAAGTGATCATCACGTACACCCGGTGAAA 1184
consensus_12093#2      CGAATAAGTAAAGTATTTTGCTGACTGTTTGCAAGTGATCATCACGTACACCCGGTGAAA 1169
                                *     *       **      **           *      **   *  *

consensus_12093#0      GCCACGAGACGC-CATCGGCGCG-----CAACTCCAGTGTACATAGAAAAGTATAGGGCC 1288
consensus_12093#3      CCCCT----CGC-CGTCGCCGC------CGCCGTCCGTGCTCA----------------- 1098
consensus_12093#1      GCTTAGCTCCAAATGTGGATGTAATTAGCAGCGGCCTTCCGTACGTGGTGGCGCCGATCG 1244
consensus_12093#2      GCTTAGCTCCAAATGTGGATGTAATTAGCAGCGGCCTTCCGTACGTGGTGGCGCCGATCG 1229
                        *       *     * *  *       *  *  *  *    *                 

consensus_12093#0      AGAGTACTGAAATAAGCATTTGATGAAGCCTGTGTGTTGTTTTCCAGCCACTAACCGGTT 1348
consensus_12093#3      ------------------------------------------------------------
consensus_12093#1      ATGATCTTGCAGGGGTTGCAATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCT 1304
consensus_12093#2      ATGATCTTGCAGGGGTTGCAATTAGGGATTGATTTCCATTTTGCTGATGTAAATTTGCCA 1289
                                                                                   

consensus_12093#0      ACTGTTTTGATCAGGAACACCAGGTCAGATTATAGCTATAACGGTTTTCTGATGTGCTGA 1408
consensus_12093#3      ------------------------------------------------------------
consensus_12093#1      ACTGTCTCATTGGACCAAAACATATATTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 1364
consensus_12093#2      ACTGTCTCATTGGACCAAAAAA-------------------------------------- 1311
                                                                                   

consensus_12093#0      TGTTGTTGTAAGGCAGTTGTAGTGTACTAGTGCCCCTGTTTGGTAGTACTGGGAGCATAT 1468
consensus_12093#3      ------------------------------------------------------------
consensus_12093#1      TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCATATATATATCAGTGTTGAT 1424
consensus_12093#2      ------------------------------------------------------------
                                                                                   

consensus_12093#0      GCTATTCAATGCTTGTAACAAAAAAGACATA 1499
consensus_12093#3      -------------------------------
consensus_12093#1      GAATGGATTGGTTTTTCCCAAAAA------- 1448
consensus_12093#2      -------------------------------
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)