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Oryza sativa
cluster # 12110 cluster # 12110       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12110#0 length = 2263 sequences # 1  
consensus_12110#1 length = 1486 sequences # 1  
consensus_12110#2 length = 613 sequences # 5  
consensus_12110#3 length = 579 sequences # 3  

consensusID : consensus_12110#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2263
fasta sequence
                              [CAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTTCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCCACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCTCTCAAGCTGGGGGTCCTCCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCCCCTGCGCGCTCCGCGCCTTCTCCCTCATCCCCCACCCTTCCACCGGATCCTACACCGCCATCCTCTCCGCGCTCTCCCGCCACGGCCGCCGCCGGGAGGCCCTCTCCCTCTTCTCCGCCGCCGCGGTCGCCCGCCCCGACGCCGAGCTCCTCTCCTGCGTCGTCTCCTGCTGCCGCCGCGCATCCGCCTCCCTCCCCGCTCGCGCCGCGCACGCCTACGGGGTAAAGACCGCGCCACTGCTGGCCTTCTACGCCTCGGCCGGCCCGGCGCTCGTCGCGCTGTATGCGATGTGTGGGAGGGTGAGCGCGGCCAAGAGGATCTTTGATCGTATGGACGGCGAGGACGTGGTGTCCTGGAACGCGATGATTGGGGGGTTCGCTGGTGCCGGGATGAATGGCGAGGCGTGGGATTGCTTCCGGGAGATGCGCGCAAGAGGTGTTCGAGGGAATGCCCGTACCGCGGTTGCTGTGCTGGGGGCTTGTGATTTGGAGTCTGGAAGACAGGTCCATGGGCACATGGTGAGAAACCATGGTGATAGTGGTTCAAACGCAATTCTGTGGAATGCGTTGATGAACATGTATTCACGTGTTGGATGTGTCGACAATGCAGAACATGTGTTCTTCGAGATTGAACGGAAGGATGTTGTGTCATGGAATGTGATGATAGGTGCTTTCGCAAAGAATGGGCATGGAGAGAGGGCACTTGAACTTGTGGATGCAATGTTGCGTTGTGGGATGCAGCCAGATTCAGTGACATTCACAACTCTGCTCATGGCATGCTGCCACTGTGGCTTGGTTGATGAAGGTCTTGCGCTTTTTGAGCGGTTTGTGGAAAATTCTGCCCTCATCCCTACTATGGAGCAGTGTGCTTGTATTGTGGATTTGCTTTCACGAGCTGGGAGGTTCAGAGAGGCTGCTGGATTTATTGATCAGATGCCAATCAGACCAAATGCAGTTGTATGGGGTGCTTTGTTATCTGGAAGTAGGATGCACCATGATGTGGATCATGCACAGATCGCTTTTGAGAAACTGGTTCAATTGGAGCCAGATAACCCTGGAAATTTTGTGACTATGTCAAATATATATGCAAAGGCCGGAATGGTTGAGGATGCAAAGAGAGTTAGGATGATGATTGACAGGGAGGAGTTAGTGAAGCCTTCTGGACAAAGTCGTGTTCAAGCTATGTAAGAAGTGACAGCAAGTAAATACCTGGCTGCTAGACTGTTAGGCCTAAGTAAGACCTACCCTTTTCTGTAAGCTTGATTTCTTGTTGCACCATCCTTCAAGTAATTGTATAGCTACAAAAGATGCACCACCTCTGTGGCCTCTGTTGTTTTTGTTCTTCACAATAATGTACCTTTTGTTCGTACTGGTATTTCTTCCTACGAAGATGGCAGAGACTATGACCAATAACCTACCTTCTGTTTTGTAACTGCACAGAATGGGTTATGAATGCCCAGCATTCTTTAGTTACTGTGATTTTTTTCTCTACGCTTCATTTTAAAAAGATAACAACGCAATCTTTCTATTTGCATCTCTTCTAACTGGGTAATAAACAAATTGCATGCTAATAAAACTTTCAATGTGCGCAGTTGCTTTTAGTCATCATGATTTGTCTACCGTGCTTCAGAGTGCAGCAACACTCATGCATCCACTACCAACAGTTCATTTGGTGTCTACCATTGGATATGGACAAGGTTTGTTCACTAAGAGGGGATTTAAGGGCTTGTTCAGCACCCAGGGTCCTCTGCCAAGTTTTGCAGTTCTCTCTGGCGTCCATTGTCTAGTTGTGTGCCTGTTGAGAAGGCTGCGTGGCAAAGATGACATTGTTAATGCTGGAATAGCTGGTTGTTGCACTAGCCTTGCTCTGAGCTTTCCAGATGCAGCTCATGTTGATTGGCTTTTGCTTGACGAGGTCTTACCAGGGAGAAGAAGTTAATTATGGCAACCCTGAATCTGCATAGCATTTTAATGTCTCACTGCAACACGTTGTCTGGATATTCGTAAAATAACATAGC]

[+] EMBL AK069314             [CAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTTCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCCACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCTCTCAAGCTGGGGGTCCTCCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCCCCTGCGCGCTCCGCGCCTTCTCCCTCATCCCCCACCCTTCCACCGGATCCTACACCGCCATCCTCTCCGCGCTCTCCCGCCACGGCCGCCGCCGGGAGGCCCTCTCCCTCTTCTCCGCCGCCGCGGTCGCCCGCCCCGACGCCGAGCTCCTCTCCTGCGTCGTCTCCTGCTGCCGCCGCGCATCCGCCTCCCTCCCCGCTCGCGCCGCGCACGCCTACGGGGTAAAGACCGCGCCACTGCTGGCCTTCTACGCCTCGGCCGGCCCGGCGCTCGTCGCGCTGTATGCGATGTGTGGGAGGGTGAGCGCGGCCAAGAGGATCTTTGATCGTATGGACGGCGAGGACGTGGTGTCCTGGAACGCGATGATTGGGGGGTTCGCTGGTGCCGGGATGAATGGCGAGGCGTGGGATTGCTTCCGGGAGATGCGCGCAAGAGGTGTTCGAGGGAATGCCCGTACCGCGGTTGCTGTGCTGGGGGCTTGTGATTTGGAGTCTGGAAGACAGGTCCATGGGCACATGGTGAGAAACCATGGTGATAGTGGTTCAAACGCAATTCTGTGGAATGCGTTGATGAACATGTATTCACGTGTTGGATGTGTCGACAATGCAGAACATGTGTTCTTCGAGATTGAACGGAAGGATGTTGTGTCATGGAATGTGATGATAGGTGCTTTCGCAAAGAATGGGCATGGAGAGAGGGCACTTGAACTTGTGGATGCAATGTTGCGTTGTGGGATGCAGCCAGATTCAGTGACATTCACAACTCTGCTCATGGCATGCTGCCACTGTGGCTTGGTTGATGAAGGTCTTGCGCTTTTTGAGCGGTTTGTGGAAAATTCTGCCCTCATCCCTACTATGGAGCAGTGTGCTTGTATTGTGGATTTGCTTTCACGAGCTGGGAGGTTCAGAGAGGCTGCTGGATTTATTGATCAGATGCCAATCAGACCAAATGCAGTTGTATGGGGTGCTTTGTTATCTGGAAGTAGGATGCACCATGATGTGGATCATGCACAGATCGCTTTTGAGAAACTGGTTCAATTGGAGCCAGATAACCCTGGAAATTTTGTGACTATGTCAAATATATATGCAAAGGCCGGAATGGTTGAGGATGCAAAGAGAGTTAGGATGATGATTGACAGGGAGGAGTTAGTGAAGCCTTCTGGACAAAGTCGTGTTCAAGCTATGTAAGAAGTGACAGCAAGTAAATACCTGGCTGCTAGACTGTTAGGCCTAAGTAAGACCTACCCTTTTCTGTAAGCTTGATTTCTTGTTGCACCATCCTTCAAGTAATTGTATAGCTACAAAAGATGCACCACCTCTGTGGCCTCTGTTGTTTTTGTTCTTCACAATAATGTACCTTTTGTTCGTACTGGTATTTCTTCCTACGAAGATGGCAGAGACTATGACCAATAACCTACCTTCTGTTTTGTAACTGCACAGAATGGGTTATGAATGCCCAGCATTCTTTAGTTACTGTGATTTTTTTCTCTACGCTTCATTTTAAAAAGATAACAACGCAATCTTTCTATTTGCATCTCTTCTAACTGGGTAATAAACAAATTGCATGCTAATAAAACTTTCAATGTGCGCAGTTGCTTTTAGTCATCATGATTTGTCTACCGTGCTTCAGAGTGCAGCAACACTCATGCATCCACTACCAACAGTTCATTTGGTGTCTACCATTGGATATGGACAAGGTTTGTTCACTAAGAGGGGATTTAAGGGCTTGTTCAGCACCCAGGGTCCTCTGCCAAGTTTTGCAGTTCTCTCTGGCGTCCATTGTCTAGTTGTGTGCCTGTTGAGAAGGCTGCGTGGCAAAGATGACATTGTTAATGCTGGAATAGCTGGTTGTTGCACTAGCCTTGCTCTGAGCTTTCCAGATGCAGCTCATGTTGATTGGCTTTTGCTTGACGAGGTCTTACCAGGGAGAAGAAGTTAATTATGGCAACCCTGAATCTGCATAGCATTTTAATGTCTCACTGCAACACGTTGTCTGGATATTCGTAAAATAACATAGC]


>consensus_12110#0 CAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGC GGCGCGCTCTTCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCCACCA CCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCTCTCAAGCTGGGGG TCCTCCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCC TCCTCCCCTGCGCGCTCCGCGCCTTCTCCCTCATCCCCCACCCTTCCACCGGATCCTACA CCGCCATCCTCTCCGCGCTCTCCCGCCACGGCCGCCGCCGGGAGGCCCTCTCCCTCTTCT CCGCCGCCGCGGTCGCCCGCCCCGACGCCGAGCTCCTCTCCTGCGTCGTCTCCTGCTGCC GCCGCGCATCCGCCTCCCTCCCCGCTCGCGCCGCGCACGCCTACGGGGTAAAGACCGCGC CACTGCTGGCCTTCTACGCCTCGGCCGGCCCGGCGCTCGTCGCGCTGTATGCGATGTGTG GGAGGGTGAGCGCGGCCAAGAGGATCTTTGATCGTATGGACGGCGAGGACGTGGTGTCCT GGAACGCGATGATTGGGGGGTTCGCTGGTGCCGGGATGAATGGCGAGGCGTGGGATTGCT TCCGGGAGATGCGCGCAAGAGGTGTTCGAGGGAATGCCCGTACCGCGGTTGCTGTGCTGG GGGCTTGTGATTTGGAGTCTGGAAGACAGGTCCATGGGCACATGGTGAGAAACCATGGTG ATAGTGGTTCAAACGCAATTCTGTGGAATGCGTTGATGAACATGTATTCACGTGTTGGAT GTGTCGACAATGCAGAACATGTGTTCTTCGAGATTGAACGGAAGGATGTTGTGTCATGGA ATGTGATGATAGGTGCTTTCGCAAAGAATGGGCATGGAGAGAGGGCACTTGAACTTGTGG ATGCAATGTTGCGTTGTGGGATGCAGCCAGATTCAGTGACATTCACAACTCTGCTCATGG CATGCTGCCACTGTGGCTTGGTTGATGAAGGTCTTGCGCTTTTTGAGCGGTTTGTGGAAA ATTCTGCCCTCATCCCTACTATGGAGCAGTGTGCTTGTATTGTGGATTTGCTTTCACGAG CTGGGAGGTTCAGAGAGGCTGCTGGATTTATTGATCAGATGCCAATCAGACCAAATGCAG TTGTATGGGGTGCTTTGTTATCTGGAAGTAGGATGCACCATGATGTGGATCATGCACAGA TCGCTTTTGAGAAACTGGTTCAATTGGAGCCAGATAACCCTGGAAATTTTGTGACTATGT CAAATATATATGCAAAGGCCGGAATGGTTGAGGATGCAAAGAGAGTTAGGATGATGATTG ACAGGGAGGAGTTAGTGAAGCCTTCTGGACAAAGTCGTGTTCAAGCTATGTAAGAAGTGA CAGCAAGTAAATACCTGGCTGCTAGACTGTTAGGCCTAAGTAAGACCTACCCTTTTCTGT AAGCTTGATTTCTTGTTGCACCATCCTTCAAGTAATTGTATAGCTACAAAAGATGCACCA CCTCTGTGGCCTCTGTTGTTTTTGTTCTTCACAATAATGTACCTTTTGTTCGTACTGGTA TTTCTTCCTACGAAGATGGCAGAGACTATGACCAATAACCTACCTTCTGTTTTGTAACTG CACAGAATGGGTTATGAATGCCCAGCATTCTTTAGTTACTGTGATTTTTTTCTCTACGCT TCATTTTAAAAAGATAACAACGCAATCTTTCTATTTGCATCTCTTCTAACTGGGTAATAA ACAAATTGCATGCTAATAAAACTTTCAATGTGCGCAGTTGCTTTTAGTCATCATGATTTG TCTACCGTGCTTCAGAGTGCAGCAACACTCATGCATCCACTACCAACAGTTCATTTGGTG TCTACCATTGGATATGGACAAGGTTTGTTCACTAAGAGGGGATTTAAGGGCTTGTTCAGC ACCCAGGGTCCTCTGCCAAGTTTTGCAGTTCTCTCTGGCGTCCATTGTCTAGTTGTGTGC CTGTTGAGAAGGCTGCGTGGCAAAGATGACATTGTTAATGCTGGAATAGCTGGTTGTTGC ACTAGCCTTGCTCTGAGCTTTCCAGATGCAGCTCATGTTGATTGGCTTTTGCTTGACGAG GTCTTACCAGGGAGAAGAAGTTAATTATGGCAACCCTGAATCTGCATAGCATTTTAATGT CTCACTGCAACACGTTGTCTGGATATTCGTAAAATAACATAGC



consensusID : consensus_12110#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1486
fasta sequence
                              [GTAATCTACGGGATTTACAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTCCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCGACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCCCTCAAGCTGGGGGTCCTCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCTTGGGCCGTCACCAAGATTAGATCCGGGGGATCGGATCTCTCGGCGGCGGTGGCGGCGGCGGCGGCGAGAATGAACAGCCCCCGGCGATTTGTGAATCTGGTGCTCGACGGCATCGCCCGGCGGCAGCCGTCCTACGGCCTGCACCGCGTCGACGTCTCGACGCTGTTCCGTCCGCTCGCCGCCGATGAGGATGAAGAAGGGCGGCGCGGCGGCGCTATGGAAGTCGAGGACGCTCAGCTGCCTCGCGCCGCCATGATCTTCCACCCTTGCCCATCATACGGGCTTCCGAGTTGGCCCTCCTCCGTGGATTTCATGCCTCTCGGCAGCGGCAGCGGCAGCGGCAGAGGCGGCGAAAAGAACGACGTGGTCGCCGTCGACTACAGCGGCAGCGGGGTGCTGTACGGCGCCGCCTCGCGCGCCGTCACCATCCTTCCCCCGATGAACACACCCAAGGCCTTCCCGGCTGTCGCTCACCATCGGAGGCAACATCTACGTCATGGAAAGGTACCCGGCCTCCTCCCAATCCCCCTCCTCTTGCTTCGAGGCTTCTCGTCCACGATCGCCACCCAAACCACCCCTTCGCCACGCCGCACTGGCACTGGCGCCTCCTCCCTTCGCCGCCCTTCGCCTTCACCGCCGATGATGCCCTTGATAGCATCCGCAACTTTTTCCAAGATGATGATGACTTCCTCACCGCCTACACGGCCGTCGGCGGCTCATGCATCTGGATGACAGTGCAGAGCACCGTCGCCGCCGCCGCGGGGACTTACTCCTTTGACACGTCCACCGCCACATGGACCAAGCTCGGCGACTGGTTGCTTCCGTTCAGAGGCCGCGCCGAGTATGCGCCCGAGCACAAGCTCTGGTTCGCGCTCTCCTCCGACGGCAACGAGCTGTGCGCGTCCGACCTCGCCGCCGCGGCGCAATGTGTGGAAGGTGAGCCCCGTGTCGCCCAGCGGCTCACCGGTGACGCCGCACCTCGTCCCTCTCGGCGCCGGCAGGTTCTGCATTGTCAGATTCATGTACAAAGGGTGGAGGTCCAACTTTGATTTCGACGAGAAATTCGCGGTGTTCACCGGCGTCGAGGTTCGGCGTGGTTGTAATAAGAACAGCAGCACAACGCTCCAGATGGTTAATCATAGGTCCAGACGGTACAGCCTTCTCGATAGGGTATGTGACTCTCGTGTGTTTTAAATAGAAATTTATGAATAAAAACACTTCTCA]

[+] EMBL AK121937             [GTAATCTACGGGATTTACAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGCGGCGCGCTCTCCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCGACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCCCTCAAGCTGGGGGTCCTCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCCTCCTCTTGGGCCGTCACCAAGATTAGATCCGGGGGATCGGATCTCTCGGCGGCGGTGGCGGCGGCGGCGGCGAGAATGAACAGCCCCCGGCGATTTGTGAATCTGGTGCTCGACGGCATCGCCCGGCGGCAGCCGTCCTACGGCCTGCACCGCGTCGACGTCTCGACGCTGTTCCGTCCGCTCGCCGCCGATGAGGATGAAGAAGGGCGGCGCGGCGGCGCTATGGAAGTCGAGGACGCTCAGCTGCCTCGCGCCGCCATGATCTTCCACCCTTGCCCATCATACGGGCTTCCGAGTTGGCCCTCCTCCGTGGATTTCATGCCTCTCGGCAGCGGCAGCGGCAGCGGCAGAGGCGGCGAAAAGAACGACGTGGTCGCCGTCGACTACAGCGGCAGCGGGGTGCTGTACGGCGCCGCCTCGCGCGCCGTCACCATCCTTCCCCCGATGAACACACCCAAGGCCTTCCCGGCTGTCGCTCACCATCGGAGGCAACATCTACGTCATGGAAAGGTACCCGGCCTCCTCCCAATCCCCCTCCTCTTGCTTCGAGGCTTCTCGTCCACGATCGCCACCCAAACCACCCCTTCGCCACGCCGCACTGGCACTGGCGCCTCCTCCCTTCGCCGCCCTTCGCCTTCACCGCCGATGATGCCCTTGATAGCATCCGCAACTTTTTCCAAGATGATGATGACTTCCTCACCGCCTACACGGCCGTCGGCGGCTCATGCATCTGGATGACAGTGCAGAGCACCGTCGCCGCCGCCGCGGGGACTTACTCCTTTGACACGTCCACCGCCACATGGACCAAGCTCGGCGACTGGTTGCTTCCGTTCAGAGGCCGCGCCGAGTATGCGCCCGAGCACAAGCTCTGGTTCGCGCTCTCCTCCGACGGCAACGAGCTGTGCGCGTCCGACCTCGCCGCCGCGGCGCAATGTGTGGAAGGTGAGCCCCGTGTCGCCCAGCGGCTCACCGGTGACGCCGCACCTCGTCCCTCTCGGCGCCGGCAGGTTCTGCATTGTCAGATTCATGTACAAAGGGTGGAGGTCCAACTTTGATTTCGACGAGAAATTCGCGGTGTTCACCGGCGTCGAGGTTCGGCGTGGTTGTAATAAGAACAGCAGCACAACGCTCCAGATGGTTAATCATAGGTCCAGACGGTACAGCCTTCTCGATAGGGTATGTGACTCTCGTGTGTTTTAAATAGAAATTTATGAATAAAAACACTTCTCA]


>consensus_12110#1 GTAATCTACGGGATTTACAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGC CCCCGCCGCCGGCGAGCGGCGCGCTCTCCCCGTCGACCCTCTCTCCCTCCCTCGCCTACT CGTCTCCGCCGCGACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGC CGCCCTCAAGCTGGGGGTCCTCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCC TACTCCCTCTCCGGCCTCCTCTTGGGCCGTCACCAAGATTAGATCCGGGGGATCGGATCT CTCGGCGGCGGTGGCGGCGGCGGCGGCGAGAATGAACAGCCCCCGGCGATTTGTGAATCT GGTGCTCGACGGCATCGCCCGGCGGCAGCCGTCCTACGGCCTGCACCGCGTCGACGTCTC GACGCTGTTCCGTCCGCTCGCCGCCGATGAGGATGAAGAAGGGCGGCGCGGCGGCGCTAT GGAAGTCGAGGACGCTCAGCTGCCTCGCGCCGCCATGATCTTCCACCCTTGCCCATCATA CGGGCTTCCGAGTTGGCCCTCCTCCGTGGATTTCATGCCTCTCGGCAGCGGCAGCGGCAG CGGCAGAGGCGGCGAAAAGAACGACGTGGTCGCCGTCGACTACAGCGGCAGCGGGGTGCT GTACGGCGCCGCCTCGCGCGCCGTCACCATCCTTCCCCCGATGAACACACCCAAGGCCTT CCCGGCTGTCGCTCACCATCGGAGGCAACATCTACGTCATGGAAAGGTACCCGGCCTCCT CCCAATCCCCCTCCTCTTGCTTCGAGGCTTCTCGTCCACGATCGCCACCCAAACCACCCC TTCGCCACGCCGCACTGGCACTGGCGCCTCCTCCCTTCGCCGCCCTTCGCCTTCACCGCC GATGATGCCCTTGATAGCATCCGCAACTTTTTCCAAGATGATGATGACTTCCTCACCGCC TACACGGCCGTCGGCGGCTCATGCATCTGGATGACAGTGCAGAGCACCGTCGCCGCCGCC GCGGGGACTTACTCCTTTGACACGTCCACCGCCACATGGACCAAGCTCGGCGACTGGTTG CTTCCGTTCAGAGGCCGCGCCGAGTATGCGCCCGAGCACAAGCTCTGGTTCGCGCTCTCC TCCGACGGCAACGAGCTGTGCGCGTCCGACCTCGCCGCCGCGGCGCAATGTGTGGAAGGT GAGCCCCGTGTCGCCCAGCGGCTCACCGGTGACGCCGCACCTCGTCCCTCTCGGCGCCGG CAGGTTCTGCATTGTCAGATTCATGTACAAAGGGTGGAGGTCCAACTTTGATTTCGACGA GAAATTCGCGGTGTTCACCGGCGTCGAGGTTCGGCGTGGTTGTAATAAGAACAGCAGCAC AACGCTCCAGATGGTTAATCATAGGTCCAGACGGTACAGCCTTCTCGATAGGGTATGTGA CTCTCGTGTGTTTTAAATAGAAATTTATGAATAAAAACACTTCTCA



consensusID : consensus_12110#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 613
fasta sequence
                              [CGGCTTGTTGAGAA-GCTGCGCGGCAAAGATG-ACATTGTTAATGCTGGGATAGCTGGTTGTT-GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG-CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT-GAATTTT-GTTTTGGGACAT-GTCTCATAT-CTAGATTTG-CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT-GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAAAAAAAAAAAACTGTGGCACCTGTTCTGTAATCTTTCCATCTTGCTATCCATATCTGGGATGCTGAACGTTATCAGTTATCACCTGGAAGCATGGTATTCTTCATATTTATCAAAAA]

[+] EMBL AU055703             [CGGCTTGTTGAGAA GNTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTGCCAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCNGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTNGATTTCATTGGTTTGGCNGATAAAATTTAAGAAAAAAAAAAAA                                                                                                          ]
[+] EMBL AU056198             [           GAA GCTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAAAAAAAAAAAA                                                                                                          ]
[+] EMBL AU056197             [           GAAGGCTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATA                                                                                                                               ]
[+] EMBL AU055702             [           GAAGGCTGCGCGGCAAAGATG ACATTGTTAATGCTGGGATAGCTGGTTGTT GCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTG CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGTGGAATTTTGGTTTTGGGACATGGCCNCATATCCAAGATTTGCCTTTCTGGATGACGCCAGGTTTTCCTTGCTGGACTGTNGGCAA                                                                                                                                                                    ]
[+] EMBL BI796173             [               GCTGCGCGGC AAGATGCACA TGGTAATGCT GGATA CT GTTGTTCGCACT GCCTTGCTTTGAGCTTTCCAGGAACACCACAA CCTTGCTCCAAAGCTGTGCAACCTTT  CAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGTCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCTATAGCTTAGT GAATTTT GTTTTGGGACAT GTCTCATAT CTAGATTTG CTTTCTGTATGACGCCAGGTTTTTCTTGCTGCACTGT GGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAAAAATTCGTCTCTGTGGCACCTGTTCTGTAATCTTTCCATCTTGCTATCCATATCTGGGATGCTGAACGTTATCAGTTATCACCTGGAAGCATGGTATTCTTCATATTTATCAAAAA]


>consensus_12110#2 CGGCTTGTTGAGAAGCTGCGCGGCAAAGATGACATTGTTAATGCTGGGATAGCTGGTTGT TGCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCA ACCTTTGCAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCA CAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCA TTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTA GTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAGAAAGCT ATAGCTTAGTGAATTTTGTTTTGGGACATGTCTCATATCTAGATTTGCTTTCTGTATGAC GCCAGGTTTTTCTTGCTGCACTGTGGCAAGCGCTGGCTTAACTAGATTTCATTGGTTTGG CAGATAAAATTTAAGAAAAAAAAAAAACTGTGGCACCTGTTCTGTAATCTTTCCATCTTG CTATCCATATCTGGGATGCTGAACGTTATCAGTTATCACCTGGAAGCATGGTATTCTTCA TATTTATCAAAAA



consensusID : consensus_12110#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 579
fasta sequence
                              [AGAGAAAGAGGGGGGGGTTGTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCAG-TCGGACGGCGACGAGCTCGGCGGCGGCGGCGCCAGN-GNG-AACCAGCCCCAACGACGGGGGCGCGTCTCCGCCTCCCCTCGCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCA-GGTCTTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTGGTTGTGTGCTTGTTGAGAAGGCTNCGCGGCAAAAATGACATTGTTAATGCTNGGATAGCTGGTTGTTGCACTTGCCTTGCTTTTAG-TTTCCAGGGACACCANAAGCCTTGCTCCAAAGCTGTGCAACCTTTGAAGCATTCTMATGCATCATGGGGGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGGGGGGRGTGCTTTGCCCGTTTMACACCAGAGTGGKGGCGTTCTCCCMCCATTCACTCTGCCACCACT]

[+] EMBL C27105               [AGAGAAAGAGGGGGGGGTTGTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCAGNTCGGACGGCGACGAGCTCGGCGGCGGCGGCGCCAGN GNGNAACCAGCCCCAACGACGGGGGCGCGTCTCCGCCTCCCCTCGCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGG GCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCA GGTCTTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTGGTTGTGTGCTTGTTGAGAAGGCTNCGCGGCAAAAATGACATTGTTAATGCTNGGATAGCTGGTTGTTGCACTTGCCTTGCTTTTAG TTTCCAGGGACACCANAAGCCTTG                                                                                                                                                          ]
[+] EMBL OSS1549A             [     AAGAGGGGGGGGTTGTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCAG TCGGACGGCGACGAGNTCGGCGGCGGCGGCGCCCNNGGNG AACCAGCCCCAACGACGGGGGCGCGTNTCCGCCTCCCCTCGCCGCCGCGCCCGCCGTATGTTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCAGGGTCTTCT                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BE229568             [                         cGAGCAGCGTBGGCGGCGAAACGCGGGASCAG TCGGACGGCGACGAVMTCGGCGGCGGC GC CCAG  GNG AACCAGCCCCAACGACGGGGGCGCGTCT CGCCTCCCCTCGCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCA GGTCCTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTGGTTGTGTGCTTGTTGAGAAGGCTGCGCGGCAAAGATGACATTGTTAATGCTGGGATAGCTGGTTGTTGCACTGGCCTTGCTTTGAGCTTTCCAGGRACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTGAAGCATTCTMATGCATCATGGGGGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTTGGGGGGGRGTGCTTTGCCCGTTTMACACCAGAGTGGKGGCGTTCTCCCMCCATTCACTCTGCCACCACT]


>consensus_12110#3 AGAGAAAGAGGGGGGGGTTGTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCAGTCG GACGGCGACGAGCTCGGCGGCGGCGGCGCCAGNGNGAACCAGCCCCAACGACGGGGGCGC GTCTCCGCCTCCCCTCGCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTT CGCCGGTGGCGCCTTCATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAA GGGATTTAAGGGCTCATTCAGCACCGCAGGTCTTCTGCCAAGACTTTTGCAGTTCTCTCT GGCGTCCAGAGTCTGGTTGTGTGCTTGTTGAGAAGGCTNCGCGGCAAAAATGACATTGTT AATGCTNGGATAGCTGGTTGTTGCACTTGCCTTGCTTTTAGTTTCCAGGGACACCANAAG CCTTGCTCCAAAGCTGTGCAACCTTTGAAGCATTCTMATGCATCATGGGGGGGGCTCAAC AAACAGCAGGCTGCAATGGCACAGACACTTGGGGGGGRGTGCTTTGCCCGTTTMACACCA GAGTGGKGGCGTTCTCCCMCCATTCACTCTGCCACCACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGCGAGC 60
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      GGCGCGCTCTTCCCGTCGACCCTCTCTCCCTCCCTCGCCTACTCGTCTCCGCCGCCACCA 120
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCTCTCAAGCTGGGGG 180
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      TCCTCCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTCCGGCC 240
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      TCCTCCCCTGCGCGCTCCGCGCCTTCTCCCTCATCCCCCACCCTTCCACCGGATCCTACA 300
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CCGCCATCCTCTCCGCGCTCTCCCGCCACGGCCGCCGCCGGGAGGCCCTCTCCCTCTTCT 360
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CCGCCGCCGCGGTCGCCCGCCCCGACGCCGAGCTCCTCTCCTGCGTCGTCTCCTGCTGCC 420
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      GCCGCGCATCCGCCTCCCTCCCCGCTCGCGCCGCGCACGCCTACGGGGTAAAGACCGCGC 480
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CACTGCTGGCCTTCTACGCCTCGGCCGGCCCGGCGCTCGTCGCGCTGTATGCGATGTGTG 540
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      GGAGGGTGAGCGCGGCCAAGAGGATCTTTGATCGTATGGACGGCGAGGACGTGGTGTCCT 600
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      GGAACGCGATGATTGGGGGGTTCGCTGGTGCCGGGATGAATGGCGAGGCGTGGGATTGCT 660
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      TCCGGGAGATGCGCGCAAGAGGTGTTCGAGGGAATGCCCGTACCGCGGTTGCTGTGCTGG 720
consensus_12110#1      ------------------------------------------------------------
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      GGGCTTGTGATTTGGAGTCTGGAAGACAGGTCCATGGGCACATGGTGAGAAACCATGGTG 780
consensus_12110#1      -----------------------------------------------GTAATCTACGGGA 13
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ATAGTGGTTCAAACGCAATTCTGTGGAATGCGTTGATGAACATGTATTCACGTGTTGGAT 840
consensus_12110#1      TTTACAGAGCGCGCAATGTTCGGACGCGCCAGGTGCTCGACCTCGGCCCCCGCCGCCGGC 73
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      GTGTCGACAATGCAGAACATGTGTTCTTCGAGATTGAACGGAAGGATGTTGTGTCATGGA 900
consensus_12110#1      GAGCGGCGCGCTCTCCCCGTCGACCCTCTCTCCCTCCCTCGCCTACT--CGTCTCCGCCG 131
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ATGTGATGATAGGTGCTTTCGCAAAGAATGGGCATGGAGAGAGGGCACTTGAACTTGTGG 960
consensus_12110#1      CGACCACCCCCGGCGCCGCCGCCCCGGCCGTCTCCACCCTACACGCCGCCGCCCTCAAGC 191
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ATGCAATGTTGCGTTGTGGGATGCAGCCAGATTCAGTGACATTCACAACTCTGCTCATGG 1020
consensus_12110#1      TGGGGGTCCTCCCTCCTCGCTCCCGGCCTCCAACGCCCTCGTCTCCGCCTACTCCCTCTC 251
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CATGCTGCCACTGTGGCTTGGTTGATGAAGGTCTTGCGCTTTTTGAGCGGTTTGTGGAAA 1080
consensus_12110#1      CGGCCTCCTCTTGGGCCGTCACCAAGATTAGATCCGGGGGATCGGATCTCTCGGCGGCGG 311
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ATTCTGCCCTCATCCCTACTATGGAGCAGTGTGCTTGTATTGTGGATTTGCTTTCACGAG 1140
consensus_12110#1      TGGCGGCGGCGGCGGCGAGAATGAACAGCCCCCGGCGATTTGTGAATCTG-------GTG 364
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CTGGGAGGTTCAGAGAGGCTGCTGGATTTATTGATCAGATGCCAATCAGACCAAATGCAG 1200
consensus_12110#1      CTCGACGGCATCGCCCGGCGGCAGCCGTCCTACGGCCTGCACCGCGTCGACGTCTCGACG 424
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      TTGTATGGGGTGCTTTGTTATCTGGAAGTAGGATGCACCATGATGTGGATCATGCACAGA 1260
consensus_12110#1      CTGTTCCGTCCGCTC-GCCGCCGATGAGGATGAAGAAGGGCGGCGCGGCGGCGCTATGGA 483
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      TCGCTTTTGAGAAACTGGTTCAATTGGAGCCAGATAACCCTGGAAATTTTGTGACTATGT 1320
consensus_12110#1      --AGTCGAGGACGCTCAGCTGCCTCGCGCCGCCATGATCTTCCACCCT---TGCCCATCA 538
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      CAAATATATATGCAAAGGCCGGAATGGTTGAGGATGCAAAGAGAGTTAGGATGATGATTG 1380
consensus_12110#1      TACGGGCTTCCGAGTTGGCCCTCCT--CCGTGGATTTCATGCCTCTCGGCAGCGGCAGCG 596
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ACAG-GGAGGAGTTAGTGAAGCCTTCTGGACAAAGTCGTGTTCAAGCTATGTAAGAAGTG 1439
consensus_12110#1      GCAGCGGCAGAGGCGGCGAAAAGAAC--GACGTGGTCGCCGTCGA-CTACAGCGGCAGCG 653
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ACAGCAAGTAAATACCTGGCTGCTAGACTGTTAGGCCTAAGTAAGACCTACCCTTTTCTG 1499
consensus_12110#1      GGGTGCTGTACGGCGCCGCCTCGCGCGCCGTCACCATCCTTCCCCCGATGAACACACCCA 713
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      TAAGCTTGATTTCTTGTTGCACCATCCTTCAAGTAATTGTATAGCTACAAAAGATGCACC 1559
consensus_12110#1      -AGGCCTTCCCGGCTGTCGCTCACCATCGGAGGCAACATCTACGTCATGGAAAGGTACCC 772
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ACCTCTGTGGCCTCTGTTGTTTTTGTTCTTCACAATAATGTACCTTTTGTTCGTACTGGT 1619
consensus_12110#1      GGCCTCCTCCCAATCCCCCTCCTCTTGCTTCGAGGCTTCTCGTCCACGATCGCCACCCAA 832
                                                                                   

consensus_12110#2      ------------------------------------------------------------
consensus_12110#3      ------------------------------------------------------------
consensus_12110#0      ATTTCTTCCTACGAAGATGGCAGAGACTATGACCAATAACCTACCTTCTGTTTTGTAACT 1679
consensus_12110#1      ACCACCCCTTCGCCACGCCGCACTGGCACTGGCGCCTCCTCCCTTCGCCGCCCTTCGCCT 892
                                                                                   

consensus_12110#2      --------CGGCTTGTTGAGAAGCTGCGC-----GGCAAAGATGACATTGTT---AATGC 44
consensus_12110#3      ------AGAGAAAGAGGGGGGGGTTGTGTTGTG-AGCAGCGATGGCGGCGA----AACGC 49
consensus_12110#0      GCACAGAATGGGTTATGAATGCCCAGCATTCTTTAGTTACTGTGATTTTTTTCTCTACGC 1739
consensus_12110#1      TCACC------GCCGATGATGCCCTTGAT-----AGCATCCGCAACTTTTTC---CAAGA 938
                                                          *                    * * 

consensus_12110#2      TGGGAT--AGCTGGTTGTTGC-ACTGGCCTTGCTTTGAGCTTTC------CAGGAACACC 95
consensus_12110#3      GGGAGC--AGTCGGACGGCG--ACGAGCTCGGCGGCGGCGGCGC------CAGNGNGA-- 97
consensus_12110#0      TTCATTTTAAAAAGATAACAACGCAATCTTTCTATTTGCATCTCTTCTAACTGGGTAATA 1799
consensus_12110#1      TGATGATGACTTCCTCACCGC--CTACACGGCCGTCGGCGGCTCATGCATCTGGATGACA 996
                               *              *                   *      * *    *  

consensus_12110#2      -ACAAGCCTTGCTCCAAAGCTGTGCAACCTTTGCAGCATTCTCATGCATCATGGAGGG-- 152
consensus_12110#3      -ACCAGCC-----CCAACGACGGGGGCGCGTCTCCGCCTCCCC-----TCGCCGCCGC-- 144
consensus_12110#0      AACAAATTGCATGCTAATAAAACTTTCAATGTGCGCAGTTGCTTTTAGTCATCATGATTT 1859
consensus_12110#1      GTGCAGAG------CACCGTCGCCGCCGCCGCGGGGACTTACTCCT--TTGACACGTC-- 1046
                           *          *                      *         *           

consensus_12110#2      GCTCAACAAACAGCA-GGCTGCAATGGCAC-----AGACACTTGGTGGGAGTGCTTTGAC 206
consensus_12110#3      GCCCGCCGTATGCTTCATCCGCTCCGCCGG-----AGAC-TTCGCCGGTGGCGCCTTCAT 198
consensus_12110#0      GTCTACCGTGCTTCA-GAGTGCAGCAACACT---CATGCATCCACTACCAACAGTTCATT 1915
consensus_12110#1      CACCGCCACATGGACCAAGCTCGGCGACTGGTTGCTTCCGTTCAGAGGCCGCGCCGAGTA 1106
                             *              *     *          *                     

consensus_12110#2      CG---TTTCACACCAGA-ATGG-TGGCGTTCTCCCACCATTCACTCTGCCACCACTTCTT 261
consensus_12110#3      CGG-ATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCAT 257
consensus_12110#0      TGGTGTCTACCATTGGATATGGACAAGGTTTGTTCACTAAGAGGGGATTTAAGGGCTTGT 1975
consensus_12110#1      TGCGCCCGAGCACAAGCTCTGGTTCGCGCTC-TCCTCCGACGGCAACGAGCTGTGCGCGT 1165
                        *        *    *   ***     * *    * *                      *

consensus_12110#2      GATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAGCCGAAGCACTAG 321
consensus_12110#3      TCAGCACCGCAGGTCTTCTGCCAAGACTTTT-GCAGTTCTCTCTGGCGTCCAGAGTCTGG 316
consensus_12110#0      TCAGCACCCAGGGTCCTCTGCCAAGTTTT---GCAGTTCTCTCTGGCGTCCATTGTCTAG 2032
consensus_12110#1      CCGACCTCGCCGCCGCGGCGCAATGTGTGGAAGGTGAGCCCCGTGTCGCCCAGCGGCTCA 1225
                           *  *                   *    *          *   * * *    **  

consensus_12110#2      ACTCTTCAGCATAGGGAGAAGGAGATGCT-CAAGAAAGCTATAGCTTAGTGAATTTTGTT 380
consensus_12110#3      --TTGTGTGCTTGTTGAGAAGGCTNCGCGGCAAAAATGACATTG-TTAATGC-TNGGATA 372
consensus_12110#0      --TTGTGTGCCTGTTGAGAAGGCTGCGTGGCAAAGATGACATTG-TTAATGC-TGGAATA 2088
consensus_12110#1      -CCGGTGACGCCGCACCTCGTCCCTCTCGGCGCCGGCAG-GTTCTGCATTGTCAGATTCA 1283
                            *                        *          *     * **         

consensus_12110#2      TTGGGACATGTCTCATATCTAGATTTGCTTTCTGTATGACGCCAGGT-TTTTCTTGCTGC 439
consensus_12110#3      GCTGGTTGTTGCACTTGCCTTGCTTTTAGTTTCCAGGGACACCANAAGCCTTGCTCCAAA 432
consensus_12110#0      GCTGGTTGTTGCACTAGCCTTGCTCTGAGCTTTCCA-GATGCAGC---TCATGTTGATTG 2144
consensus_12110#1      TGTACAAAGGGTGGAGGTCCAACTTTGATTTCGACGAGAAATTCG---CGGTGTTCACCG 1340
                                         *    * *    *      **            *  *     

consensus_12110#2      ACTGTGGCAAGCGCTG--GCTTAACTAGATTTCATTGGTTTGGCAGATAAAATTTAAGAA 497
consensus_12110#3      GCTGTG-CAACCTTTGAAGCATTCTMATGCATCATGGGGGGGGCTCAACAAACAGCAGGC 491
consensus_12110#0      GCTTTTGC--TTGACGAGGTCTTACCAGGGAGAAGAAGTTAATTATGGCAACCCTGAATC 2202
consensus_12110#1      GCGTCGAGGTTCGGCGTGGTTGTAATAAGAACAGCAGCACAACGCTCCAGATGGTTAATC 1400
                        *             *  *       *                       *     *   

consensus_12110#2      AAAAAA---AAAACTGTGGCACCTGTTCTGTAAT-CTTTCCATCTTGCTATCCATATCTG 553
consensus_12110#3      TGCAAT---GGCACAG--ACACTTGGGGGGGRGTGCTTTGCCCGTTTMACACCAGAGTGG 546
consensus_12110#0      TGCA-T---AGCATTTTAATGTCT-CACTGCAACACGTTGTCTGGATATTCGTAAAATAA 2257
consensus_12110#1      ATAGGTCCAGACGGTACAGCCTTCTCGATAGGGTATGTGACTCTCGTGTGTTTTAAATAG 1460
                                                            *                 *    

consensus_12110#2      GGATGCTGAACGTTATCAGTTATCACCTGGAAGCATGGTATTCTTCATATTTATCAAAAA 613
consensus_12110#3      KGGCGTTCTCC--CMCCATTCACT--CTGCCACCACT----------------------- 579
consensus_12110#0      CATAGC------------------------------------------------------ 2263
consensus_12110#1      AAATTTATGAATAAAAACACTTCTCA---------------------------------- 1486
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)