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Oryza sativa
cluster # 12123 cluster # 12123       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12123#0 length = 1967 sequences # 9  
consensus_12123#1 length = 333 sequences # 1  

consensusID : consensus_12123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1967
fasta sequence
                              [GCGACGCCGCGGGCGGCGCGCGAAGCAAATGGAGCGCGATTTTGGCGGATAAATTTGGGCGCGCGGAGGCGGGAGGAGCGGGAACCAAATCGCGGAGCCGCTTCCAACCTCAGGTCTCACCCCAAACTCGCCGCCGCCGCCGCCGCCGCCATGGAGAGGAAGCAGGCGGAGTACAGCAACCTCGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATCTACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAGCCGCACCTTCCTGTTACTACTGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTTGGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAAGGAGAGGTCTGCTATTCCTCTTGTTAAACCACACAATTTCATGCATCCTGATGATCATCTCATTCTGGAAGATGAAAGTGGGAGAGTTACACTTGCAGGAGCCATACCTCCAGCAGCATATGTTACTGGAGTTGTAATAGCTTTACATGGGAAAGAAACAAGTGCTGGCAACTTTCTTGTTGAAGATATTCTTGAGGCTGGGATTCCTCCTCAAATTACGTTACCTAGCATAAACGAGGACAAATATGTGGTATTTGTGTCGGGATTAAGTATTGGGAGTGAAAAATTCAATCCTCTGCAATTCCAACTTCTTATAGACCATATCACAGGGCATTTGGGTGATGAGAATGAGCAATCCATAGCATCCAACATAGTACGTGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTCAATGGTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTGGATATAATGCTCACTCAGCTTGTGGCATCATTGCCTGTGGACATGATGCCTGGATCTAATGACCCAGCAAATTTTTCTTTGCCTCAACAGCCTTTGCATAGATGCCTTTTTGCTGGAGCAGCCACTTATAACACTTTTTCATCGTGCTCGAATCCACATCAATTCGAGCTTGATAGTGTCCGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCAAACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCCCATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCTAGAAAAAC-AAAAAGTGAGG-CTGATCTGCATTCCAAGATTTTGTG-ATAGTGGAGTTGCTGTCATG-CTCAATTTGAGGAACTTGGAGTGC-AGCA-CGTTGAGTTTCTCAACAAG-CTTCGATGCTTGA-CCATG-CTCTACTTGT-CTGGAGTG-CAAGTGAGTTGATGTAGCA-TGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCAC-AGCTGATTTATTCGTCAGATGTTGTATTCTTTCTCATCAGTCTTAGAAAATGTATATTTCGGATCAGATATGCAGATGCAAAATTGCACAGCAAAAAGCAGAGTAAATTAGATTACTGCTAGTCTCTAGAAGTTTAGCTTGAGTTAGATGTCTTCCCCAGGTTGCAGAAGATGGAGTTGTTGTTCAACATGAACGGGAAGAGTTAAGAGTATTTTTCCCCTAATTCCAGACTCTAAGAATTGATATATTTGGTGTGGTTCGACTTACCCT]

[+] EMBL AK067991             [GCGACGCCGCGGGCGGCGCGCGAAGCAAATGGAGCGCGATTTTGGCGGATAAATTTGGGCGCGCGGAGGCGGGAGGAGCGGGAACCAAATCGCGGAGCCGCTTCCAACCTCAGGTCTCACCCCAAACTCGCCGCCGCCGCCGCCGCCGCCATGGAGAGGAAGCAGGCGGAGTACAGCAACCTCGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATCTACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAGCCGCACCTTCCTGTTACTACAGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTTGGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAAGGAGAGGTCTGCTATTCCTCTTGTTAAACCACACAATTTCATGCATCCTGATGATCATCTCATTCTGGAAGATGAAAGTGGGAGAGTTACACTTGCAGGAGCCATACCTCCAGCAGCATATGTTACTGGAGTTGTAATAGCTTTACATGGGAAAGAAACAAGTGCTGGCAACTTTCTTGTTGAAGATATTCTTGAGGCTGGGATTCCTCCTCAAATTACGTTACCTAGCATAAACGAGGACAAATATGTGGTATTTGTGTCGGGATTAAGTATTGGGAGTGAAAAATTCAATCCTCTGCAATTCCAACTTCTTATAGACCATATCACAGGGCATTTGGGTGATGAGAATGAGCAATCCATAGCATCCAACATAGTACGTGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTCAATGGTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTGGATATAATGCTCACTCAGCTTGTGGCATCATTGCCTGTGGACATGATGCCTGGATCTAATGACCCAGCAAATTTTTCTTTGCCTCAACAGCCTTTGCATAGATGCCTTTTTGCTGGAGCAGCCACTTATAACACTTTTTCATCGTGCTCGAATCCACATCAATTCGAGCTTGATAGTGTCCGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCAAACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCCCATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCTAGAAAAAC AAAAAGTGAGG CTGATCTGCATTCCAAGATTTTGTG ATAGTGGAGTTGCTGTCATG CTCAATTTGAGGAACTTGGAGTGC AGCA CGTTGAGTTTCTCAACAAG CTTCGATGCTTGA CCATG CTCTACTTGT CTGGAGTG CAAGTGAGTTGATGTAGCA TGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCAC AGCTGATTTATTCGTCAGATGTTGTATTCTTTCTCATCAGTCTTAGAAAATGTATATTTCGGATCAGATATGCAGATGCAAAATTGCACAGCAGACAGCAGAGTAAATTAGATTACTGCTAGTCTCTAGAAGTTTAGCTTGAGTTAGATGTCTTCCCCAGGTTGCAGAAGATGGAGTTGTTGTTCAACATGAACGGGAAGAGTTAAGAGTATTTTTCCCCTAATTCCAGACTCTAAGAATTGATATATTTGGTGTGGTTCGACTTACCCT]
[+] EMBL AB037900             [                                                                                         gcgtccgGCCGCTTCCAACCTCAGGTCTCACCCCAAACTCGCCGCCGCCGCCGCCGCCGCCATGGAGAGGAAGCAGGCGGAGTACAGCAACCTCGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATCTACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAGCCGCACCTTCCTGTTACTACTGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTTGGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAAGGAGAGGTCTGCTATTCCTCTTGTTAAACCACACAATTTCATGCATCCTGATGATCATCTCATTCTGGAAGATGAAAGTGGGAGAGTTACACTTGCAGGAGCCATACCTCCAGCAGCATATGTTACTGGAGTTGTAATAGCTTTACATGGGAAAGAAACAAGTGCTGGCAACTTTCTTGTTGAAGATATTCTTGAGGCTGGGATTCCTCCTCAAATTACGTTACCTAGCATAAACGAGGACAAATATGTGGTATTTGTGTCGGGATTAAGTATTGGGAGTGAAAAATTCAATCCTCTGCAATTCCAACTTCTTATAGACCATATCACAGGGCATTTGGGTGATGAGAATGAGCAATCCATAGCATCCAACATAGTACGTGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTCAATGGTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTGGATATAATGCTCACTCAGCTTGTGGCATCATTGCCTGTGGACATGATGCCTGGATCTAATGACCCAGCAAATTTTTCTTTGCCTCAACAGCCTTTGCATAGATGCCTTTTTGCTGGAGCAGCCACTTATAACACTTTTTCATCGTGCTCGAATCCACATCAATTCGAGCTTGATAGTGTCCGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCAAACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCCCATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCTAGAAAAAC AAAAAGTGAGG CTGATCTGCATTCCAAGATTTTGTG ATAGTGGAGTTGCTGTCATG CTCAATTTGAGGAACTTGGAGTGC AGCA CGTTGAGTTTCTCAACAAG CTTCGATGCTTGA CCATG CTCTACTTGT CTGGAGTG CAAGTGAGTTGATGTAGCA TGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCAC AGCTGATTTATTCGTCAGATGTTGTATTCTTTCTCATCAGTCTTAGAAAATGTATATTTCGGATCAGATATGCAGATGCAAAATTGCACAGCAAAAA                                                                                                                                                                             ]
[+] EMBL OSR20081A            [                                                                                                         AACCTCAGGTCTCACCCCAAACTCGCCGCCGCCGCCGCCGCCGCCATGGAGAGGAAGCAGGCGGAGTACAGCAACCTCGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATCTACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAGCCGCACCTTCCTGTTACTACTGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTTGGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU068594             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAATGAGCAATCCATAGCATCCAACATAGTACGTGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTCAATGGTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTGGATATAATGCTCACTCAGCTTGTNGCATCATTGCCTGTGGACATGATGCCTGGATCTAATGACCCAGCAAATTTTTCTTTGCCTCAACAGCCTTTGCATAGATGCCTTTTTGCTGGAGCAGCCACTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB000054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         aggcCCTCTTATAACACTTTTTCATCGTGCTCGAATCCACATCACTTTGAGCTTGATAGTGTCCGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCAAACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCCCATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCTAGAAAAAC AAAAAGTGAGG CTGATCTGCATTCCAAGATTTTGTG ATAGTGGAGTTGCTGTCATG CTCAATTTGAGGAACTTGGAGTGC AGCA CGTTGAGTTTCTCAACAAG CTTCGATGCTTGA CCATG CTCTACTTGT CTGGAGTG CAAGTGAGTTGATGTAGCA TGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCAC AGCTGATTTATTCGTCAaaaaaaa                                                                                                                                                                                                                                                      ]
[+] EMBL CA999950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACACTTTTTCATCGTGCTCGAATCCACATCAATCCGAGCTTGATAGTGTCCGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCAAACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCCCATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCTAGAAAAAC AAAAAGTGAGG CTGATCTGCATTCCAAGATTTTGTG ATAGTGGAGTTGCTGTCATG CTCAATTTGAGGAACTTGGAGTGC AGCA CGTTGAGTTTCTCAACAAG CTTCGATGCTTGA CCATG CTCTACTTGT CTGGAGTG CAAGTGAGTTGATGTAGCA TGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCAC AGCTGATTTATTCGTCAaaaaaaa                                                                                                                                                                                                                                                      ]
[+] EMBL CA999984             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACACTTTTTCATCGTGGTCGAATCCACATCCACCTTAGCTTGATAGTGTCCGGGTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAAGACAAGCTGGAATTCATGGAAAGAACACTGCGGGGGCGGCATCTTGCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL D42873               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aAAAAACAAAAAAGTGAGGCCTGACCTGCATCCCAAGATTTTGTGAAAAGCGGAGTTGCTGCCATGCCTCAA TTGAGGACCTTGGAGTGCAAGCACCGTTGAGTTTCCCAACAAGCCTCCGATGCTTGACCCATGCCTCTACTTGTCCTGGAGTGCCAAGTGAGTTGATGTAGCACAGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTAT                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU173285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGGAGTTGCTGTCATG CTCAATTTGAGGAACTTGGAGTGC AGCA CGTTGAGTTTCTCAACAAG CTTCGATGCTTGA CCATG CTCTACTTGT CTGGAGTG CAAGTGAGTTGATGTAGCA TGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCACAAGCTGATTTATTCGTCAGATGTTGTATTCTTTCTCATCAGTCTTAGAAAATGTATATTTCGGATCAGATATGCAGATGCAAAATTGCACAGCAAAAA                                                                                                                                                                             ]


>consensus_12123#0 GCGACGCCGCGGGCGGCGCGCGAAGCAAATGGAGCGCGATTTTGGCGGATAAATTTGGGC GCGCGGAGGCGGGAGGAGCGGGAACCAAATCGCGGAGCCGCTTCCAACCTCAGGTCTCAC CCCAAACTCGCCGCCGCCGCCGCCGCCGCCATGGAGAGGAAGCAGGCGGAGTACAGCAAC CTCGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATC TACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAG CCGCACCTTCCTGTTACTACTGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTT GGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAAGGAG AGGTCTGCTATTCCTCTTGTTAAACCACACAATTTCATGCATCCTGATGATCATCTCATT CTGGAAGATGAAAGTGGGAGAGTTACACTTGCAGGAGCCATACCTCCAGCAGCATATGTT ACTGGAGTTGTAATAGCTTTACATGGGAAAGAAACAAGTGCTGGCAACTTTCTTGTTGAA GATATTCTTGAGGCTGGGATTCCTCCTCAAATTACGTTACCTAGCATAAACGAGGACAAA TATGTGGTATTTGTGTCGGGATTAAGTATTGGGAGTGAAAAATTCAATCCTCTGCAATTC CAACTTCTTATAGACCATATCACAGGGCATTTGGGTGATGAGAATGAGCAATCCATAGCA TCCAACATAGTACGTGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTC AATGGTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTG GATATAATGCTCACTCAGCTTGTGGCATCATTGCCTGTGGACATGATGCCTGGATCTAAT GACCCAGCAAATTTTTCTTTGCCTCAACAGCCTTTGCATAGATGCCTTTTTGCTGGAGCA GCCACTTATAACACTTTTTCATCGTGCTCGAATCCACATCAATTCGAGCTTGATAGTGTC CGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAA GACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCA AACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCC CATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCTAGAA AAACAAAAAGTGAGGCTGATCTGCATTCCAAGATTTTGTGATAGTGGAGTTGCTGTCATG CTCAATTTGAGGAACTTGGAGTGCAGCACGTTGAGTTTCTCAACAAGCTTCGATGCTTGA CCATGCTCTACTTGTCTGGAGTGCAAGTGAGTTGATGTAGCATGCTGCTGTGGACATCTT AATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGT GATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCA AAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTC TCGGTATGAGTATCCACAGCTGATTTATTCGTCAGATGTTGTATTCTTTCTCATCAGTCT TAGAAAATGTATATTTCGGATCAGATATGCAGATGCAAAATTGCACAGCAAAAAGCAGAG TAAATTAGATTACTGCTAGTCTCTAGAAGTTTAGCTTGAGTTAGATGTCTTCCCCAGGTT GCAGAAGATGGAGTTGTTGTTCAACATGAACGGGAAGAGTTAAGAGTATTTTTCCCCTAA TTCCAGACTCTAAGAATTGATATATTTGGTGTGGTTCGACTTACCCT



consensusID : consensus_12123#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 333
fasta sequence
                              [AGTGCAGCACGTTGAGTTTCTCAANAAGCTTCGATGCTTGNCCATGCTCTACTTGTCTGGAGTGCAAGTGAGTTGATGTAGCATGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGNCCTAGGTTTCNCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCACAGCTGATTTATTCGTCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU068593             [AGTGCAGCACGTTGAGTTTCTCAANAAGCTTCGATGCTTGNCCATGCTCTACTTGTCTGGAGTGCAAGTGAGTTGATGTAGCATGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGNCCTAGGTTTCNCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCACAGCTGATTTATTCGTCAAAAAAAAAAAAAAAAAAA]


>consensus_12123#1 AGTGCAGCACGTTGAGTTTCTCAANAAGCTTCGATGCTTGNCCATGCTCTACTTGTCTGG AGTGCAAGTGAGTTGATGTAGCATGCTGCTGTGGACATCTTAATCCTGAACTGGCGCAGG GTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGTGATGNCCTAGGTTTCNCCA ATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCAAAAGCTGAAATAGAGGGTG CACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTCTCGGTATGAGTATCCACAG CTGATTTATTCGTCAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12123#0      GCGACGCCGCGGGCGGCGCGCGAAGCAAATGGAGCGCGATTTTGGCGGATAAATTTGGGC 60
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GCGCGGAGGCGGGAGGAGCGGGAACCAAATCGCGGAGCCGCTTCCAACCTCAGGTCTCAC 120
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CCCAAACTCGCCGCCGCCGCCGCCGCCGCCATGGAGAGGAAGCAGGCGGAGTACAGCAAC 180
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CTCGACGAGAGGTACGCGATCCAGGGGGAGAAGTACCAGGGGCAGCAGTACAGCCACATC 240
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      TACTTCACGCGACTCCACCACATGCGCAACCTCCTCCACGCCCTCGTCCCCTCCTGGAAG 300
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CCGCACCTTCCTGTTACTACTGTGTTGGGACTTGAAGAAGGAAAGGATTGCATAATCGTT 360
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GGAACTTTATATAAGCACATGAAATTAAAGCCTTCCATTCTTGATGAATATTCTAAGGAG 420
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      AGGTCTGCTATTCCTCTTGTTAAACCACACAATTTCATGCATCCTGATGATCATCTCATT 480
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CTGGAAGATGAAAGTGGGAGAGTTACACTTGCAGGAGCCATACCTCCAGCAGCATATGTT 540
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      ACTGGAGTTGTAATAGCTTTACATGGGAAAGAAACAAGTGCTGGCAACTTTCTTGTTGAA 600
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GATATTCTTGAGGCTGGGATTCCTCCTCAAATTACGTTACCTAGCATAAACGAGGACAAA 660
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      TATGTGGTATTTGTGTCGGGATTAAGTATTGGGAGTGAAAAATTCAATCCTCTGCAATTC 720
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CAACTTCTTATAGACCATATCACAGGGCATTTGGGTGATGAGAATGAGCAATCCATAGCA 780
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      TCCAACATAGTACGTGTTGTGGTGGCTGGGAATTCGGTACATATTTCTCCAAGATTCTTC 840
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      AATGGTCAGGCAGTAGCATCGAAAGATCAATCCAGGATAGCTGAACCAATCAAAGAATTG 900
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GATATAATGCTCACTCAGCTTGTGGCATCATTGCCTGTGGACATGATGCCTGGATCTAAT 960
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GACCCAGCAAATTTTTCTTTGCCTCAACAGCCTTTGCATAGATGCCTTTTTGCTGGAGCA 1020
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GCCACTTATAACACTTTTTCATCGTGCTCGAATCCACATCAATTCGAGCTTGATAGTGTC 1080
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CGGTTTATTGGAACATCTGGACAGAACATAGATGACCTCTACAAGTACTCTGATGCCAAA 1140
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GACAAGCTGGAATTCGTGGAAAGAACACTGCGGTGGCGTCATCTTGCTCCAACTGCTCCA 1200
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      AACAGTCTAGGATGTTATCCATACACAGACAAGGATCCTTTTCTCGTTGAAAGCTGTCCC 1260
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CATGTTTACTTCGTCGGGAATCAAGATAAATATGAAACTCAATTATTGCAAGGGCTAGAA 1320
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      AAACAAAAAGTGAGGCTGATCTGCATTCCAAGATTTTGTGATAGTGGAGTTGCTGTCATG 1380
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      CTCAATTTGAGGAACTTGGAGTGCAGCACGTTGAGTTTCTCAACAAGCTTCGATGCTTGA 1440
consensus_12123#1      -------------------AGTGCAGCACGTTGAGTTTCTCAANAAGCTTCGATGCTTGN 41
                                          ************************ *************** 

consensus_12123#0      CCATGCTCTACTTGTCTGGAGTGCAAGTGAGTTGATGTAGCATGCTGCTGTGGACATCTT 1500
consensus_12123#1      CCATGCTCTACTTGTCTGGAGTGCAAGTGAGTTGATGTAGCATGCTGCTGTGGACATCTT 101
                       ************************************************************

consensus_12123#0      AATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGT 1560
consensus_12123#1      AATCCTGAACTGGCGCAGGGTTGTCTAAAGGATGTACTTGTAGTTCTTTTTTTAGATTGT 161
                       ************************************************************

consensus_12123#0      GATGACCTAGGTTTCTCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCA 1620
consensus_12123#1      GATGNCCTAGGTTTCNCCAATTAGATGTGTTGATATAATTGCCTAAACCTCGATGTATCA 221
                       **** ********** ********************************************

consensus_12123#0      AAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTC 1680
consensus_12123#1      AAAGCTGAAATAGAGGGTGCACGGTTTGTACTAAACAAAAAGAAGCGTATGCTTCTTTTC 281
                       ************************************************************

consensus_12123#0      TCGGTATGAGTATCCACAGCTGATTTATTCGTCAGATGTTGTATTCTTTCTCATCAGTCT 1740
consensus_12123#1      TCGGTATGAGTATCCACAGCTGATTTATTCGTCAAAAAAAAAAAAAAAAAAA-------- 333
                       ********************************** *      *                 

consensus_12123#0      TAGAAAATGTATATTTCGGATCAGATATGCAGATGCAAAATTGCACAGCAAAAAGCAGAG 1800
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      TAAATTAGATTACTGCTAGTCTCTAGAAGTTTAGCTTGAGTTAGATGTCTTCCCCAGGTT 1860
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      GCAGAAGATGGAGTTGTTGTTCAACATGAACGGGAAGAGTTAAGAGTATTTTTCCCCTAA 1920
consensus_12123#1      ------------------------------------------------------------
                                                                                   

consensus_12123#0      TTCCAGACTCTAAGAATTGATATATTTGGTGTGGTTCGACTTACCCT 1967
consensus_12123#1      -----------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)