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Oryza sativa
cluster # 12127 cluster # 12127       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12127#0 length = 2274 sequences # 9  
consensus_12127#1 length = 544 sequences # 1  

consensusID : consensus_12127#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2274
fasta sequence
                              [TGGTGGCGGCGGCGGCGATGGAGAGCGAGATGGCGGACGCGGCGCCGGCACCGGCGGTGGCGGCGGCGGCGACGGCGGAGCCGCTGGCGGCGGTGGCGGAGGAAGGGGAGGAAGGCGGGGAGGCGGCGGTGGGGTCCACCCTCACCATGGAGCGCGTCGCCGCGGCGAAGAAGTTCATCGAGAACCACTACCGCTCGCAGATGAAGAACATCCAGGAGCGCAAGGAGAGGCGCTTTAGATTGGAGCGACAACTGGAATCTTCCCAAGTTCCCAGGGAGCAGCAAATCAATCTACTAAAAGATCTGGAGAGAAAGGAAACAGAGTACATGCGGCTTAAAAGGCACAAAATCTGCGTTGATGACTTTGAGCTGCTCACCATTATTGGCAGAGGAGCTTTTGGAGAGGTTCGACTCTGCCGGGAGAAGACATCTAGCAACATTTATGCAATGAAAAAGCTAAAGAAGTCTGATATGGTTGTCAGGGGTCAAGTGGAACATGTTAGAGCGGAAAGAAACTTGCTGGCTGAAGTTGCTAGCCACTGCATTGTGAAGCTATACTATTCTTTTCAAGATTCGGAGTACCTTTATCTTATCATGGAGTATCTCCCTGGTGGTGATATCATGACCCTTCTCATGAGAGAGGATACCTTAACTGAGCATGTGGCTCGATTCTACATTGCTGAGACCATCCTTGCTATTGAGTCCATTCATAAACACAACTACATCCACAGAGATATTAAGCCTGACAACCTGCTTCTCGACAAGAATGGTCACATGAAGCTGTCAGATTTTGGGCTGTGCAAGCCAATTGATTGTTCAAAGCTCTCAACATTGAATGAAGATGAACCGATG-GGTGATGACAATTTGAGGGAATCAATGGATATCGATAGCTCTTTCTCTGAAACAACAAATGGTAGAAGGTGGAGAAGTCAACATGAACAACTTCAGCACTGGCAGATGAACAGAAGAAAACTGGCATTCTCAACTGTTGGGACACCAGACTATATTGCTCCAGAAGTTCTGCTAAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCTTTGGGTGCAATCATGTATGAGATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAATAACCACATGCCGAAAGATTGTCCACTGGAGAGACCATTTGAAATTTCCAGAGGATTCAAAGGTGTCTCCTGAAGCAAGGGATCTCATTTGCCGGTTATTATGTGATGTTGACCACAGGATTGGCAGTGCAGGAGCAGACCAAATAAAGGCACATCCTTGGTTCCGTGGAGTTGCTTGGGAAAAACTATATGAGATGGAAGCTGCATTTAAGCCTCAAGTAAATGATGAACTGGACACACAGAACTTCATGAAGTTTGAGGAAATGGATAATGCTCCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGATGATGCTGAATTCCAAAGACCTCAGCTTTGTGGGATATACGTACAAAAACTTTGATGCTGTGAAAGGATTGAAACATTCAGATCAACAAAGGAACCAATCTCTAATAAGGCCCTCTATTGGCTCCATTTTTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACACAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTT-CCTTGGAAAATCCTGAACTAAAA-TTAGCATGCGACGCCTGAACGATGTGGCTTCATC-CGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTG-CCCTGTTAATCGTTGGCGA-GCATTCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCT-GAGTACTTAA-CAA-AACAGCCCGTGTA-CCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGC-TATGCTGTTGTTGCTGTTG-CCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTCCGTAACGACCCTTTTGCCCCCTAGTCTATGGTCTCCCG-TTGCAGAAATGCCTAATTTTGTCTGTTAGTGTAATGTTCATCAGTTATATCTTTGGTCATGTACTATTA-TTGAACCCTCTGACTTCATAATTTTGTGGAGATACTACCTTCTTTTCCGATGTAAAAAAAAAAAAAA]

[+] EMBL AK121977             [TGGTGGCGGCGGCGGCGATGGAGAGCGAGATGGCGGACGCGGCGCCGGCACCGGCGGTGGCGGCGGCGGCGACGGCGGAGCCGCTGGCGGCGGTGGCGGAGGAAGGGGAGGAAGGCGGGGAGGCGGCGGTGGGGTCCACCCTCACCATGGAGCGCGTCGCCGCGGCGAAGAAGTTCATCGAGAACCACTACCGCTCGCAGATGAAGAACATCCAGGAGCGCAAGGAGAGGCGCTTTAGATTGGAGCGACAACTGGAATCTTCCCAAGTTCCCAGGGAGCAGCAAATCAATCTACTAAAAGATCTGGAGAGAAAGGAAACAGAGTACATGCGGCTTAAAAGGCACAAAATCTGCGTTGATGACTTTGAGCTGCTCACCATTATTGGCAGAGGAGCTTTTGGAGAGGTTCGACTCTGCCGGGAGAAGACATCTAGCAACATTTATGCAATGAAAAAGCTAAAGAAGTCTGATATGGTTGTCAGGGGTCAAGTGGAACATGTTAGAGCGGAAAGAAACTTGCTGGCTGAAGTTGCTAGCCACTGCATTGTGAAGCTATACTATTCTTTTCAAGATTCGGAGTACCTTTATCTTATCATGGAGTATCTCCCTGGTGGTGATATCATGACCCTTCTCATGAGAGAGGATACCTTAACTGAGCATGTGGCTCGATTCTACATTGCTGAGACCATCCTTGCTATTGAGTCCATTCATAAACACAACTACATCCACAGAGATATTAAGCCTGACAACCTGCTTCTCGACAAGAATGGTCACATGAAGCTGTCAGATTTTGGGCTGTGCAAGCCAATTGATTGTTCAAAGCTCTCAACATTGAATGAAGATGAACCGATG GGTGATGACAATTTGAGGGAATCAATGGATATCGATAGCTCTTTCTCTGAAACAACAAATGGTAGAAGGTGGAGAAGTCAACATGAACAACTTCAGCACTGGCAGATGAACAGAAGAAAACTGGCATTCTCAACTGTTGGGACACCAGACTATATTGCTCCAGAAGTTCTGCTAAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCTTTGGGTGCAATCATGTATGAGATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAATAACCACATGCCGAAAGATTGTCCACTGGAGAGACCATTTGAAATTTCCAGAGGATTCAAAGGTGTCTCCTGAAGCAAGGGATCTCATTTGCCGGTTATTATGTGATGTTGACCACAGGATTGGCAGTGCAGGAGCAGACCAAATAAAGGCACATCCTTGGTTCCGTGGAGTTGCTTGGGAAAAACTATATGAGATGGAAGCTGCATTTAAGCCTCAAGTAAATGATGAACTGGACACACAGAACTTCATGAAGTTTGAGGAAATGGATAATGCTCCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGATGATGCTGAATTCCAAAGACCTCAGCTTTGTGGGATATACGTACAAAAACTTTGATGCTGTGAAAGGATTGAAACATTCAGATCAACAAAGGAACCAATCTCTAATAAGGCCCTCTATTGGCTCCATTTTTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACACAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTT CCTTGGAAAATCCTGAACTAAAA TTAGCATGCGACGCCTGAACGATGTGGCTTCATC CGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTG CCCTGTTAATCGTTGGCGA GCATTCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCT GAGTACTTAA CAA AACAGCCCGTGTA CCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGGGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTT                                                                                                                                                                                                                                                                              ]
[+] EMBL CF324036             [                                                                                                                                                                                                                                                                                                                                                                                                           TTTGGAGAGGTTCGACTCTGCCGGGAGAAGACATCTAGCAACATTTATGCAATGAAAAAGCTAAAGAAGTCTGATATGGTTGTCAGGGGTCAAGTGGAACATGTTAGAGCGGAAAGAAACTTGCTGGCTGAAGTTGCTAGCCACTGCATTGTGAAGCTATACTATTCTTTTCAAGATTCGGAGTACCTTTATCTTATCATGGAGTATCTCCCTGGTGGTGATATCATGACCCTTCTCATGAGAGAGGATACCTTAACTGAGCATGTGGCTCGATTCTACATTGCTGAGACCATCCTTGCTATTGAGTCCATTCATAAACACAACTACATCCACAGAGATATTAAGCCTGACAACCTGCTTCTCGACAAGAATGGTCACATGAAGCTGTCAGATTTTGGGCTGTGCAAGCCAATTGATTGTTCAAAGCTCTCAACATTGAATGAAGATGAACCGATGNGGTGATGACAATTTGAGGGAATCAATGGATATCGATAGCTCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB665593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CACATGAAGCTGTCAGATTTTGGGCTGTGCAAGCCAATTGATTGTTCAAAGCTCTCAACATTGAATGAAGATGAACCGATG GGTGATGACAATTTGAGGGAATCAATGGATATCGATAGCTCTTTCTCTGAAACAACAAATGGTAGAAGGTGGAGAAGTCAACATGAACAACTTCAGCACTGGCAGATGAACAGAAGAAAACTGGCATTCTCAACTGTTGGGACACCAGACTATATTGCTCCAGAAGTTCTGCTAAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCTTTGGGTGCAATCATGTATGAGATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAATAACCACATGCCGAAAGATTGTCCACTGGAGAAACCATTTGAAATTTCCAGAGGATTCAAAGGTGTCTCCTGAAGCAAGGGATCTCATTTGCCGGTTATTATGTGATGTTGACCACAGGATTGGCAGTGCAGGAGCAGACCAAATAAAGGCACATCCTTGGTTCCGTGGAGTTGCTTGGGAAAAACTATATGAGATGGAAGCTGCATTTAAGCCTCAAGTAAATGATGAACTGGACACACAGAACTTCATGAAGTTTGAGGAAATGGATAATGCTCCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGATGATGCTGAATTCCAAAGACCTCAGCTTTGTGGGATATACGTACAAAAACTTTGATGCTGTGAAAGGATTGAAACATTCAGATCAACAAAGGAACCCATCTCTAATAAGGCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB665594             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCTCAAGTAAATGATGAACTGGACACACAGAACTTCATGAAGTTTGAGGAAATGGATAATGCTCCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGATGATGCTGAATTCCAAAGACCTCAGCTTTGTGGGATATACGTACAAAAACTTTGATGCTGTGAAAGGATTGAAACATTCAGATCAACAAAGGAACCAATCTCTAATAAGGCCCTCTATTGGCTCCATTTTTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACACAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTT CCTTGGAAAATCCTGAACTAAAA TTAGCATGCGACGCCTGAACGATGTGGCTTCATC CGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTG CCCTGTTAATCGTTGGCGA GCATTCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCT GAGTACTTAA CAA AACAGCCCGTGTA CCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCGGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGC TATGCTGTTGTTGCTGTTG CCGGTGGTGTTTTAAGGGGCGTGTGTATCAGCA                                                                                                                                                                                         ]
[-] EMBL CA759428             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGACCCAAATGGAAGGGACAAGCCCATGCACACAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTT CCTTGGAAAATCCTGAACTAAAA TTAGCATGCGACGCCTGAACGATGTGGCTTCATC CGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTG CCCTGTTAATCGTTGGCGA GCATTCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCT GAGTACTTAA CAA AACAGCCCGTGTA CCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGC TATGCTGTTGTTGCTGTTG CCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTCCGTAACGACCCTTTTGCCCCCTAGTCTATGGTCTCCCG TTGCAGAAATGCCTAATTTTGTCTGTTAGTGTAATGTTCATCAGTTATATCTTTGGTCATGTACTATTA TTGAACCCTCTGACTTCATAATTTTGTGGAGATACTACCTTCTTTTCCGATGTAAAAAAAAAAAAAA]
[-] EMBL CB967198             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTTCCCTTGGAAAATCCTGAACTCAAA TTAGCATGCGACGCCTGAACGATGTGGCTTCATCGCGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTG CCCTGTTAATCGTTGGCGA GCATTCTGTAGAAATCCCACCAAGCTTCTAGTTGTAAAAATAGTATGATGGAGTACTTAACCAA ACCAGCCCGTGTACCCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACTAACCGGAAATGGCCCGGTTGGGGGGAGTATTTGCCCCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGCCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCCAGCGTATGCTGTTGTTGCTGTTGCCCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTCCGTAACGACCTTTTTGCCCCCTAGTCTATGGTCTCCCG TTGCAGAAATCCCTAATTTTGT                                                                                                                   ]
[+] EMBL BI812936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGACCTGCGTCCC TTGTTCCCTTGGAAAATCCTGAACTAAAATTTAGCATGCGACGCCTGAACGATGTGGCTTCATC CGGAGAACCTGCTTGTTTTA GCCAGGTTATCTGCCCCTGTTAATCGTT GCGACGCATTCTGTAGAAATCCCACAAAGCTTCTAGTTGTAAAAATAGTATGCT GAGTACTT A C A AACAGCCCGTGTA CCCAGGGGGGCTTGT GTCTTTGTTGTAGCGTGTTGGGACCCAGCGGAAAT GGCA GTTGGGGGGAGTATTTGCACCTTT GGGGCT GCTGCCCAGGTTGCCAGAGCTAATT CCGCCTTCTCTTGT GCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGC TATGCTGTTGTTGCTGTTG CCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTCCGTAACGACCCTTTTGCCCCCTAaaaaaaaaa                                                                                                                                                ]
[+] EMBL BQ906304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCT GAGTACTTAA CAA AACAGCCCGTGTA CCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGC TATGCTGTTGTTGCTGTTG CCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTCCGTAACGACCCTTTTGCCCCCTAGTCTATGGTCTCCCGTTTGCAGAAATGCCTAATTTTGTCTGTTAGTGTAATGTTCATCAGTTATATCTTTGGTCATGTACTATTATTTGAACCCTCTGACTTCATAAaaaaa                                         ]
[+] EMBL BM420122             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGTACTTAACCAATACCAGCCCGTGTA CCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGC TATGCTGTTGTTGCTGTTG CCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTCCGTAACGACCCTTTTGCCCCCTAGTCTATGGTCTCCCG TTGCAGAAATGCCTAATTTTGTCTGTTAGTGTAATGTTCATCAGTTATATCTTTGGTCATGTACTATTA TTGAACCCTCTGACTTCATAATTTTGTGGAGATACTACCTTCTTTTCCGA   AAAAAAA       ]


>consensus_12127#0 TGGTGGCGGCGGCGGCGATGGAGAGCGAGATGGCGGACGCGGCGCCGGCACCGGCGGTGG CGGCGGCGGCGACGGCGGAGCCGCTGGCGGCGGTGGCGGAGGAAGGGGAGGAAGGCGGGG AGGCGGCGGTGGGGTCCACCCTCACCATGGAGCGCGTCGCCGCGGCGAAGAAGTTCATCG AGAACCACTACCGCTCGCAGATGAAGAACATCCAGGAGCGCAAGGAGAGGCGCTTTAGAT TGGAGCGACAACTGGAATCTTCCCAAGTTCCCAGGGAGCAGCAAATCAATCTACTAAAAG ATCTGGAGAGAAAGGAAACAGAGTACATGCGGCTTAAAAGGCACAAAATCTGCGTTGATG ACTTTGAGCTGCTCACCATTATTGGCAGAGGAGCTTTTGGAGAGGTTCGACTCTGCCGGG AGAAGACATCTAGCAACATTTATGCAATGAAAAAGCTAAAGAAGTCTGATATGGTTGTCA GGGGTCAAGTGGAACATGTTAGAGCGGAAAGAAACTTGCTGGCTGAAGTTGCTAGCCACT GCATTGTGAAGCTATACTATTCTTTTCAAGATTCGGAGTACCTTTATCTTATCATGGAGT ATCTCCCTGGTGGTGATATCATGACCCTTCTCATGAGAGAGGATACCTTAACTGAGCATG TGGCTCGATTCTACATTGCTGAGACCATCCTTGCTATTGAGTCCATTCATAAACACAACT ACATCCACAGAGATATTAAGCCTGACAACCTGCTTCTCGACAAGAATGGTCACATGAAGC TGTCAGATTTTGGGCTGTGCAAGCCAATTGATTGTTCAAAGCTCTCAACATTGAATGAAG ATGAACCGATGGGTGATGACAATTTGAGGGAATCAATGGATATCGATAGCTCTTTCTCTG AAACAACAAATGGTAGAAGGTGGAGAAGTCAACATGAACAACTTCAGCACTGGCAGATGA ACAGAAGAAAACTGGCATTCTCAACTGTTGGGACACCAGACTATATTGCTCCAGAAGTTC TGCTAAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCTTTGGGTGCAATCATGTATG AGATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAATAACCACATGCCGAAAGA TTGTCCACTGGAGAGACCATTTGAAATTTCCAGAGGATTCAAAGGTGTCTCCTGAAGCAA GGGATCTCATTTGCCGGTTATTATGTGATGTTGACCACAGGATTGGCAGTGCAGGAGCAG ACCAAATAAAGGCACATCCTTGGTTCCGTGGAGTTGCTTGGGAAAAACTATATGAGATGG AAGCTGCATTTAAGCCTCAAGTAAATGATGAACTGGACACACAGAACTTCATGAAGTTTG AGGAAATGGATAATGCTCCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGATGATGCTGA ATTCCAAAGACCTCAGCTTTGTGGGATATACGTACAAAAACTTTGATGCTGTGAAAGGAT TGAAACATTCAGATCAACAAAGGAACCAATCTCTAATAAGGCCCTCTATTGGCTCCATTT TTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACA CAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTTCCTTGGAAAATC CTGAACTAAAATTAGCATGCGACGCCTGAACGATGTGGCTTCATCCGGAGAACCTGCTTG TTTTAGGCCAGGTTATCTGCCCTGTTAATCGTTGGCGAGCATTCTGTAGAAATCCAACAA AGCTTCTAGTTGTAAAAATAGTATGCTGAGTACTTAACAAAACAGCCCGTGTACCCAGGG GGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGA GTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTT GTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGCT ATGCTGTTGTTGCTGTTGCCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTC CGTAACGACCCTTTTGCCCCCTAGTCTATGGTCTCCCGTTGCAGAAATGCCTAATTTTGT CTGTTAGTGTAATGTTCATCAGTTATATCTTTGGTCATGTACTATTATTGAACCCTCTGA CTTCATAATTTTGTGGAGATACTACCTTCTTTTCCGATGTAAAAAAAAAAAAAA



consensusID : consensus_12127#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence
                              [AAGGAACCATCTCTAATAAGGCCCTCTATTGGCTCCATTTTTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACACAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTTCCTTGGAAAATCCTGAACTAAAATTAGCATGCGACGCCTGAACGATGTGGCTTCATCCGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTGCCCTGTTAATCGTTGGCGAGCATTCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCTGAGTACTTAACAAAACAGCCCGTGTACCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGCTATGCTGTTGTTGCTAAAAAAAAAA]

[+] EMBL BQ907885             [AAGGAACCATCTCTAATAAGGCCCTCTATTGGCTCCATTTTTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACACAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTTCCTTGGAAAATCCTGAACTAAAATTAGCATGCGACGCCTGAACGATGTGGCTTCATCCGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTGCCCTGTTAATCGTTGGCGAGCATTCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCTGAGTACTTAACAAAACAGCCCGTGTACCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGCTATGCTGTTGTTGCTAAAAAAAAAA]


>consensus_12127#1 AAGGAACCATCTCTAATAAGGCCCTCTATTGGCTCCATTTTTGGTCCAGCAGATATGGAT CCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACACAGTTTCTTCTGGTGATCCG ATGATTCAATGACCTGCGTCCCGTTGTTCCTTGGAAAATCCTGAACTAAAATTAGCATGC GACGCCTGAACGATGTGGCTTCATCCGGAGAACCTGCTTGTTTTAGGCCAGGTTATCTGC CCTGTTAATCGTTGGCGAGCATTCTGTAGAAATCCAACAAAGCTTCTAGTTGTAAAAATA GTATGCTGAGTACTTAACAAAACAGCCCGTGTACCCAGGGGGGCTTGTGGTCTTTGTTGT AGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGAGTATTTGCACCTTTGGGGGC TGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTTGTGGCAGTTCCTGGTCCGCT GACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGCTATGCTGTTGTTGCTAAAAAA AAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12127#0      TGGTGGCGGCGGCGGCGATGGAGAGCGAGATGGCGGACGCGGCGCCGGCACCGGCGGTGG 60
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      CGGCGGCGGCGACGGCGGAGCCGCTGGCGGCGGTGGCGGAGGAAGGGGAGGAAGGCGGGG 120
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      AGGCGGCGGTGGGGTCCACCCTCACCATGGAGCGCGTCGCCGCGGCGAAGAAGTTCATCG 180
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      AGAACCACTACCGCTCGCAGATGAAGAACATCCAGGAGCGCAAGGAGAGGCGCTTTAGAT 240
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      TGGAGCGACAACTGGAATCTTCCCAAGTTCCCAGGGAGCAGCAAATCAATCTACTAAAAG 300
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ATCTGGAGAGAAAGGAAACAGAGTACATGCGGCTTAAAAGGCACAAAATCTGCGTTGATG 360
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ACTTTGAGCTGCTCACCATTATTGGCAGAGGAGCTTTTGGAGAGGTTCGACTCTGCCGGG 420
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      AGAAGACATCTAGCAACATTTATGCAATGAAAAAGCTAAAGAAGTCTGATATGGTTGTCA 480
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      GGGGTCAAGTGGAACATGTTAGAGCGGAAAGAAACTTGCTGGCTGAAGTTGCTAGCCACT 540
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      GCATTGTGAAGCTATACTATTCTTTTCAAGATTCGGAGTACCTTTATCTTATCATGGAGT 600
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ATCTCCCTGGTGGTGATATCATGACCCTTCTCATGAGAGAGGATACCTTAACTGAGCATG 660
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      TGGCTCGATTCTACATTGCTGAGACCATCCTTGCTATTGAGTCCATTCATAAACACAACT 720
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ACATCCACAGAGATATTAAGCCTGACAACCTGCTTCTCGACAAGAATGGTCACATGAAGC 780
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      TGTCAGATTTTGGGCTGTGCAAGCCAATTGATTGTTCAAAGCTCTCAACATTGAATGAAG 840
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ATGAACCGATGGGTGATGACAATTTGAGGGAATCAATGGATATCGATAGCTCTTTCTCTG 900
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      AAACAACAAATGGTAGAAGGTGGAGAAGTCAACATGAACAACTTCAGCACTGGCAGATGA 960
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ACAGAAGAAAACTGGCATTCTCAACTGTTGGGACACCAGACTATATTGCTCCAGAAGTTC 1020
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      TGCTAAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCTTTGGGTGCAATCATGTATG 1080
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      AGATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAATAACCACATGCCGAAAGA 1140
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      TTGTCCACTGGAGAGACCATTTGAAATTTCCAGAGGATTCAAAGGTGTCTCCTGAAGCAA 1200
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      GGGATCTCATTTGCCGGTTATTATGTGATGTTGACCACAGGATTGGCAGTGCAGGAGCAG 1260
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ACCAAATAAAGGCACATCCTTGGTTCCGTGGAGTTGCTTGGGAAAAACTATATGAGATGG 1320
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      AAGCTGCATTTAAGCCTCAAGTAAATGATGAACTGGACACACAGAACTTCATGAAGTTTG 1380
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      AGGAAATGGATAATGCTCCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGATGATGCTGA 1440
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      ATTCCAAAGACCTCAGCTTTGTGGGATATACGTACAAAAACTTTGATGCTGTGAAAGGAT 1500
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      TGAAACATTCAGATCAACAAAGGAACCAATCTCTAATAAGGCCCTCTATTGGCTCCATTT 1560
consensus_12127#1      -------------------AAGGAACCA-TCTCTAATAAGGCCCTCTATTGGCTCCATTT 40
                                          ********* *******************************

consensus_12127#0      TTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACA 1620
consensus_12127#1      TTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACA 100
                       ************************************************************

consensus_12127#0      CAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTTCCTTGGAAAATC 1680
consensus_12127#1      CAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTTCCTTGGAAAATC 160
                       ************************************************************

consensus_12127#0      CTGAACTAAAATTAGCATGCGACGCCTGAACGATGTGGCTTCATCCGGAGAACCTGCTTG 1740
consensus_12127#1      CTGAACTAAAATTAGCATGCGACGCCTGAACGATGTGGCTTCATCCGGAGAACCTGCTTG 220
                       ************************************************************

consensus_12127#0      TTTTAGGCCAGGTTATCTGCCCTGTTAATCGTTGGCGAGCATTCTGTAGAAATCCAACAA 1800
consensus_12127#1      TTTTAGGCCAGGTTATCTGCCCTGTTAATCGTTGGCGAGCATTCTGTAGAAATCCAACAA 280
                       ************************************************************

consensus_12127#0      AGCTTCTAGTTGTAAAAATAGTATGCTGAGTACTTAACAAAACAGCCCGTGTACCCAGGG 1860
consensus_12127#1      AGCTTCTAGTTGTAAAAATAGTATGCTGAGTACTTAACAAAACAGCCCGTGTACCCAGGG 340
                       ************************************************************

consensus_12127#0      GGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGA 1920
consensus_12127#1      GGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGGTTGGGGGGA 400
                       ************************************************************

consensus_12127#0      GTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTT 1980
consensus_12127#1      GTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCGCCTTCTCTT 460
                       ************************************************************

consensus_12127#0      GTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGCT 2040
consensus_12127#1      GTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGGAAACAAACAAATAAGGCAAGCT 520
                       ************************************************************

consensus_12127#0      ATGCTGTTGTTGCTGTTGCCGGTGGTGTTTTGATGTGCGTGTGTATCAGCAGAAATTTTC 2100
consensus_12127#1      ATGCTGTTGTTGCTAAAAAAAAAA------------------------------------ 544
                       **************                                              

consensus_12127#0      CGTAACGACCCTTTTGCCCCCTAGTCTATGGTCTCCCGTTGCAGAAATGCCTAATTTTGT 2160
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      CTGTTAGTGTAATGTTCATCAGTTATATCTTTGGTCATGTACTATTATTGAACCCTCTGA 2220
consensus_12127#1      ------------------------------------------------------------
                                                                                   

consensus_12127#0      CTTCATAATTTTGTGGAGATACTACCTTCTTTTCCGATGTAAAAAAAAAAAAAA 2274
consensus_12127#1      ------------------------------------------------------
                                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)