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Oryza sativa
cluster # 12131 cluster # 12131       Sequences # 10       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12131#0 length = 2252 sequences # 2  
consensus_12131#1 length = 705 sequences # 3  
consensus_12131#2 length = 627 sequences # 1  
consensus_12131#3 length = 596 sequences # 1  
consensus_12131#4 length = 407 sequences # 1  
consensus_12131#5 length = 390 sequences # 1  
consensus_12131#6 length = 294 sequences # 1  

consensusID : consensus_12131#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2252
fasta sequence
                              [CTAATTCTTCCGATCTGTCCGCAGAGGTACGCGCAGTTATTTCTGGACCTTCTTGATAGTTAAGGTCGATCTTGGTTACTGGAATTTATAAGGAATCGGGATTTGGTGTGTGTATTCTTGGCAAGTTGGCACGGGGGATGATCTTTGCCCAATTCAGTTTCATTTGTGCGCAGAAACTTGCTTGCTGCGGAATCTGACCCAAGGAGTTTTCGAGATGAGCGGGAGGAGATCGTTCTTCGCATCCAAGAAGCCGTCGCGGAGCAGCAACCCCTTCGACTCCGACTCCGACGATGGCGGGAGGGAGCAGAGACCGGCGAGGGCCTCCTCCGTGCCTCCTCCGGCCGACCAGCGGGGCTCCCTCTTCGGCGGCGGGGATGGCTTCTCCGCCTCGTCGGCGGCGGCGAGGAGCCGGTACAGGAACGACTTCCGCGACACCGGCGGCGTGGAGGCCCAGTCGGTGCAGGAGCTGGAGGGCTACGCGGCGTACAAGGCGGAGGAGACCACTCAGCGGGTGCAGGGCTGCGTCCGCATCGCCGAGGAGATGAGGGATACCGCGTCCAAGAGCCTCGTCACCATACACCAGCAGGGCCAGCAGATCACGCGCACGCACATGATGACCCTCGACATCGACCAGGATCTCTCCAGGGTAACTAACACAAACTAATAACTAATACTATGTGATTACTCAGAAGCCTGATTAATTCTGTTTGATCACATAGTGGCGTAACAAGTCCCCACCAAAATTGGCCTGTTTCCTTCAGAATTCCATCCTTAATAAGTCCACGAAAACTGAAACAAACTTCGTGTCACACTTCAGAAATTAATTGCCAACTCCAAATTTACTGTATTATGTGGTAATAATGGCTAAAGGGAATTCTTCGCACCTTTTCAGAGCGAGAAGCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGGTAATCTCCAACTCTAGTCTTGAAATAGTAGACTGCAACAACAGTTGCTGACAGGGAAAGCTTGTACTATGTGGTATCACTTATCAGTTATGTTCTCTGTGTAACTAACTGGAAGGATGGAATTACTTGTATGCAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGGTAATGCGCTAAGACATATATGGTGATTGATTTGCTAAGTGTGTGTATTCTGATTATCTTGTTGTGTTGCTCAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGGTGAATGCCACATTTTTCACTTTAGTTCATAAAAACTAATACACACTTGTTTTTTCTGAGATTGGCGTATTGTTATGTGGAATCCCTTTTTTGTGCTCTAATTCCAGCGTACTTTTATAGTTTGTACTAACTGCCAGTTTATGTTTAGTCCATTCTTTAAAAATTTTCACTTCTTCATGCTGAACGAACTAAAAAGGAGTAAAAAGTTTGGCCAAAGTACCTTCAAATTCAAGCGGCAAATTACTTCCTAATATCTAATCTGGAACACTTTGCATAATTATATTTAAATCTGATGAGTATTGTTGCTTTAACAGTCCAACCAATAAAAATCATCATGTGATATGTCTTTTTGTCTGTTGATTGGATTCAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGTCTGCTTGGAAAATAAACTGCAGAATATAATCTCATCACAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTCTTGTGGAGGATAATTAATTGTTTTGTGGGCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCATTAGCCAGTAATGCTTTGTGCCATTGTTTTGGAATTTGGATCGTTCGCAATTGTTTCAAATCGCGTTAGCATCAATAAAATTAGCAATCTGCCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK065640             [CTAATTCTTCCGATCTGTCCGCAGAGGTACGCGCAGTTATTTCTGGACCTTCTTGATAGTTAAGGTCGATCTTGGTTACTGGAATTTATAAGGAATCGGGATTTGGTGTGTGTATTCTTGGCAAGTTGGCACGGGGGATGATCTTTGCCCAATTCAGTTTCATTTGTGCGCAGAAACTTGCTTGCTGCGGAATCTGACCCAAGGAGTTTTCGAGATGAGCGGGAGGAGATCGTTCTTCGCATCCAAGAAGCCGTCGCGGAGCAGCAACCCCTTCGACTCCGACTCCGACGATGGCGGGAGGGAGCAGAGACCGGCGAGGGCCTCCTCCGTGCCTCCTCCGGCCGACCAGCGGGGCTCCCTCTTCGGCGGCGGGGATGGCTTCTCCGCCTCGTCGGCGGCGGCGAGGAGCCGGTACAGGAACGACTTCCGCGACACCGGCGGCGTGGAGGCCCAGTCGGTGCAGGAGCTGGAGGGCTACGCGGCGTACAAGGCGGAGGAGACCACTCAGCGGGTGCAGGGCTGCGTCCGCATCGCCGAGGAGATGAGGGATACCGCGTCCAAGAGCCTCGTCACCATACACCAGCAGGGCCAGCAGATCACGCGCACGCACATGATGACCCTCGACATCGACCAGGATCTCTCCAGGGTAACTAACACAAACTAATAACTAATACTATGTGATTACTCAGAAGCCTGATTAATTCTGTTTGATCACATAGTGGCGTAACAAGTCCCCACCAAAATTGGCCTGTTTCCTTCAGAATTCCATCCTTAATAAGTCCACGAAAACTGAAACAAACTTCGTGTCACACTTCAGAAATTAATTGCCAACTCCAAATTTACTGTATTATGTGGTAATAATGGCTAAAGGGAATTCTTCGCACCTTTTCAGAGCGAGAAGCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGGTAATCTCCAACTCTAGTCTTGAAATAGTAGACTGCAACAACAGTTGCTGACAGGGAAAGCTTGTACTATGTGGTATCACTTATCAGTTATGTTCTCTGTGTAACTAACTGGAAGGATGGAATTACTTGTATGCAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGGTAATGCGCTAAGACATATATGGTGATTGATTTGCTAAGTGTGTGTATTCTGATTATCTTGTTGTGTTGCTCAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGGTGAATGCCACATTTTTCACTTTAGTTCATAAAAACTAATACACACTTGTTTTTTCTGAGATTGGCGTATTGTTATGTGGAATCCCTTTTTTGTGCTCTAATTCCAGCGTACTTTTATAGTTTGTACTAACTGCCAGTTTATGTTTAGTCCATTCTTTAAAAATTTTCACTTCTTCATGCTGAACGAACTAAAAAGGAGTAAAAAGTTTGGCCAAAGTACCTTCAAATTCAAGCGGCAAATTACTTCCTAATATCTAATCTGGAACACTTTGCATAATTATATTTAAATCTGATGAGTATTGTTGCTTTAACAGTCCAACCAATAAAAATCATCATGTGATATGTCTTTTTGTCTGTTGATTGGATTCAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGTCTGCTTGGAAAATAAACTGCAGAATATAATCTCATCACAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTCTTGTGGAGGATAATTAATTGTTTTGTGGGCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCATTAGCCAGTAATGCTTTGTGCCATTGTTTTGGAATTTGGATCGTTCGCAATTGTTTCAAATCGCGTTAGCATCAATAAAATTAGCAAT                                                                                ]
[+] EMBL CF313534             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCATTAGCCAGTAATGCTTTGTGCCATTGTTTTGGAATTTGGATCGTTCGCAATTGTTTCAAATCGCGTTAGCATCAATAAAATTAGCAATCTGCCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12131#0 CTAATTCTTCCGATCTGTCCGCAGAGGTACGCGCAGTTATTTCTGGACCTTCTTGATAGT TAAGGTCGATCTTGGTTACTGGAATTTATAAGGAATCGGGATTTGGTGTGTGTATTCTTG GCAAGTTGGCACGGGGGATGATCTTTGCCCAATTCAGTTTCATTTGTGCGCAGAAACTTG CTTGCTGCGGAATCTGACCCAAGGAGTTTTCGAGATGAGCGGGAGGAGATCGTTCTTCGC ATCCAAGAAGCCGTCGCGGAGCAGCAACCCCTTCGACTCCGACTCCGACGATGGCGGGAG GGAGCAGAGACCGGCGAGGGCCTCCTCCGTGCCTCCTCCGGCCGACCAGCGGGGCTCCCT CTTCGGCGGCGGGGATGGCTTCTCCGCCTCGTCGGCGGCGGCGAGGAGCCGGTACAGGAA CGACTTCCGCGACACCGGCGGCGTGGAGGCCCAGTCGGTGCAGGAGCTGGAGGGCTACGC GGCGTACAAGGCGGAGGAGACCACTCAGCGGGTGCAGGGCTGCGTCCGCATCGCCGAGGA GATGAGGGATACCGCGTCCAAGAGCCTCGTCACCATACACCAGCAGGGCCAGCAGATCAC GCGCACGCACATGATGACCCTCGACATCGACCAGGATCTCTCCAGGGTAACTAACACAAA CTAATAACTAATACTATGTGATTACTCAGAAGCCTGATTAATTCTGTTTGATCACATAGT GGCGTAACAAGTCCCCACCAAAATTGGCCTGTTTCCTTCAGAATTCCATCCTTAATAAGT CCACGAAAACTGAAACAAACTTCGTGTCACACTTCAGAAATTAATTGCCAACTCCAAATT TACTGTATTATGTGGTAATAATGGCTAAAGGGAATTCTTCGCACCTTTTCAGAGCGAGAA GCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGA AATCAGGGGGCCTATGCTAACTAGAGGTAATCTCCAACTCTAGTCTTGAAATAGTAGACT GCAACAACAGTTGCTGACAGGGAAAGCTTGTACTATGTGGTATCACTTATCAGTTATGTT CTCTGTGTAACTAACTGGAAGGATGGAATTACTTGTATGCAGATGATTCCTTCATTCGGA AGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGA ATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGGTAATGCGCT AAGACATATATGGTGATTGATTTGCTAAGTGTGTGTATTCTGATTATCTTGTTGTGTTGC TCAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGA GCTGAAAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGGTGAATGCCACATTTTTC ACTTTAGTTCATAAAAACTAATACACACTTGTTTTTTCTGAGATTGGCGTATTGTTATGT GGAATCCCTTTTTTGTGCTCTAATTCCAGCGTACTTTTATAGTTTGTACTAACTGCCAGT TTATGTTTAGTCCATTCTTTAAAAATTTTCACTTCTTCATGCTGAACGAACTAAAAAGGA GTAAAAAGTTTGGCCAAAGTACCTTCAAATTCAAGCGGCAAATTACTTCCTAATATCTAA TCTGGAACACTTTGCATAATTATATTTAAATCTGATGAGTATTGTTGCTTTAACAGTCCA ACCAATAAAAATCATCATGTGATATGTCTTTTTGTCTGTTGATTGGATTCAGACAAACAA AGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTTCAGGATCAAGGGAGCAA ACACTCGGGCACGCCGTCTGCTTGGAAAATAAACTGCAGAATATAATCTCATCACAGGAC AGGAGTCCTTCCATCCCTTTTACCCTTAGTCTTGTGGAGGATAATTAATTGTTTTGTGGG CCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCT GGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCATTAGCCAGTAATGCTT TGTGCCATTGTTTTGGAATTTGGATCGTTCGCAATTGTTTCAAATCGCGTTAGCATCAAT AAAATTAGCAATCTGCCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12131#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 705
fasta sequence
                              [AGCAGATCACGCGCACGCACATGATGACCCTCGACATCGACCAGGATCTCTCCAGGAGCGAGAAGCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCA-CTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTT-CAGGATCA-AGGGAGCAAACACTCGGGCACG-CCGTCTGCTTGGAAAATAAACTG-CAGAATATAAT--TTCAT-CA-CA-GGACA-GGAGT-CCTT-CCATCCC-TTTTACCCTTAGT--TTTGTGGA-GGATAATTAATTGTTTTGTGGGCCA-TTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTAC-GGTG-AATGGTTGGTCCTGGATATGTCAGGGTATAATGTATC-TGTATATACTGCTATAGCCATTAG-CCAGTAATGCTTTGTGCCATTGTTTTGGAAAAA]

[-] EMBL CB653308             [AGCAGATCACGCGCACGCACATGATGACCCTCGACATCGACCAGGATCTCTCCAGGAGCGAGAAGCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATTTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCA CTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTT CAGGATCA AGGGAGCAAACACTCGGGCACG CCGTTTGCTTGGAAAATAAACTG CAGAATATAAT  TTCAT CA CA GGACA GGAGT CCTT CCATCCC TTTTACCCTTAGT  TTTGTGGA GGATAATTAATTGTTTTGTGGGCCA TTGGTTTTGATGATTCTGTGCATCAGATTTTGATCAGTAC GGTG AATGGTTGGTCCTGGATATGTCAGGGTATAATGTATC TGTATATACTGCTATAGCCATTAG CCAGTAAGGCTTTGTGCCA              ]
[+] EMBL BQ908953             [                                                                                                                                                                                                                                     TGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCNAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACCTGAGATTGACAGACNAACCAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTTGCAGGATCAGAGGGAGCNAACACTCGGGCACGCCCGTCTGCTTGGAAAATAAACTG CAGAATATAAT  CTCAT CA CA GGACACGGAGT CCTT CCATCCC TTTTACCCTTAGT  CTTGTGGA GGATAATTAATTGTTTTGTGGGCCACTTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTAC GGTG AATGGTTGGTCCTGGATATGTCAGGGTATAATGTATCGTGTATATACTGCTATAGCCATTAGCCCAGTAATGCTTTGTGCCNTTGTTTTGGAAAAA]
[+] EMBL AU175018             [                                                                                                                                                                                                                                                       CGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCA CTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTT CAGGATCA AGGGAGCAAACACTCGGGCACG CCGTCTGCTTGGAAAATAAACTGCCAGAATATAATNCTCCATCCACCAGGGCCA GGAGTCCCTTCCCATCCCTTTTTCCCCTTAGTTCTTTNGGGAGGGATAATTAATTNTTTTGGGGGCCA TTGGTTCTGATGATTCTG GCATCAGATTTTGATCAGTACGGGTGAAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATC TGTATATACTGCTATAGCCATTAG CCAGTAATGCTTTGTGCCAaaaaaaa       ]


>consensus_12131#1 AGCAGATCACGCGCACGCACATGATGACCCTCGACATCGACCAGGATCTCTCCAGGAGCG AGAAGCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGTGGAAGCCAAAAAAGAATG GAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCTTCATTCGGAAGGGCAGCCATT TGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAAT TCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATG ATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGG GCACTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAAC TGAACTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGTCTGCTTGGAAAATAAACTG CAGAATATAATTTCATCACAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTTTTGTG GAGGATAATTAATTGTTTTGTGGGCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGA TCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATCTGTATATACTGC TATAGCCATTAGCCAGTAATGCTTTGTGCCATTGTTTTGGAAAAA



consensusID : consensus_12131#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence
                              [AACCATAAGGNTGGTAANATGGCNCCNGNTAAATTTGTTCGGTTAATGGGGATGGGNGGAANATTCAANCGGGAAAGGTTGGCCGGTAACCCAGGTTGNATTAACCTNAATAAAGGGACAAAAGNGGGGTTCCNCGNGGNGGCGCCGTTTAGGAATAGGGNNTCCCNGGGNGCANGAAATNGGCAGGNGTTGNCCNGNATTTNGGCAGGGGCACCCNTCCAGGAAAGGGAAATGGNGGAAGGCAAAGCNGGNTGANGGCCTATTTGAATNTAAGTAAACATATTGACCGNAGTGGAAGGCATGGCGGTTGAACATGGGCACTGAGATTGACAGACAAACAAAGGCTTTGGGGAGATTCAGAGAAGGACTACGGACGAACTGAACTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGTCTGCTTGGAAAATAAACTGCAGAATATAATCTCATCACAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTCTTGTGGAGGATAATTAATTGTTTTGTGGGCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCA]

[-] EMBL BE229125             [AACCATAAGGNTGGTAANATGGCNCCNGNTAAATTTGTTCGGTTAATGGGGATGGGNGGAANATTCAANCGGGAAAGGTTGGCCGGTAACCCAGGTTGNATTAACCTNAATAAAGGGACAAAAGNGGGGTTCCNCGNGGNGGCGCCGTTTAGGAATAGGGNNTCCCNGGGNGCANGAAATNGGCAGGNGTTGNCCNGNATTTNGGCAGGGGCACCCNTCCAGGAAAGGGAAATGGNGGAAGGCAAAGCNGGNTGANGGCCTATTTGAATNTAAGTAAACATATTGACCGNAGTGGAAGGCATGGCGGTTGAACATGGGCACTGAGATTGACAGACAAACAAAGGCTTTGGGGAGATTCAGAGAAGGACTACGGACGAACTGAACTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGTCTGCTTGGAAAATAAACTGCAGAATATAATCTCATCACAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTCTTGTGGAGGATAATTAATTGTTTTGTGGGCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCA]


>consensus_12131#2 AACCATAAGGNTGGTAANATGGCNCCNGNTAAATTTGTTCGGTTAATGGGGATGGGNGGA ANATTCAANCGGGAAAGGTTGGCCGGTAACCCAGGTTGNATTAACCTNAATAAAGGGACA AAAGNGGGGTTCCNCGNGGNGGCGCCGTTTAGGAATAGGGNNTCCCNGGGNGCANGAAAT NGGCAGGNGTTGNCCNGNATTTNGGCAGGGGCACCCNTCCAGGAAAGGGAAATGGNGGAA GGCAAAGCNGGNTGANGGCCTATTTGAATNTAAGTAAACATATTGACCGNAGTGGAAGGC ATGGCGGTTGAACATGGGCACTGAGATTGACAGACAAACAAAGGCTTTGGGGAGATTCAG AGAAGGACTACGGACGAACTGAACTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGT CTGCTTGGAAAATAAACTGCAGAATATAATCTCATCACAGGACAGGAGTCCTTCCATCCC TTTTACCCTTAGTCTTGTGGAGGATAATTAATTGTTTTGTGGGCCATTGGTTCTGATGAT TCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATA ATGTATCTGTATATACTGCTATAGCCA



consensusID : consensus_12131#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 596
fasta sequence
                              [TATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATTTAAGTAACATATTGCCCGAGCTGAAAGGCATGGCGGTTGACATGGGCCCTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTTCGACGAACTGAATTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGTTTGCTTGGAAAATAAACTGCAGAATATAATTTCATCCCAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTTTTGTGGAGGATAATTAATTGTTTTGTGGGCCATTGGTTTTGATGATTTTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATTTGTATATTCTGCTATAGCCATTTTTCAGGGGTGCT]

[-] EMBL CB653307             [TATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATTTAAGTAACATATTGCCCGAGCTGAAAGGCATGGCGGTTGACATGGGCCCTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTTCGACGAACTGAATTTCAGGATCAAGGGAGCAAACACTCGGGCACGCCGTTTGCTTGGAAAATAAACTGCAGAATATAATTTCATCCCAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTTTTGTGGAGGATAATTAATTGTTTTGTGGGCCATTGGTTTTGATGATTTTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGATATGTCAGGGTATAATGTATTTGTATATTCTGCTATAGCCATTTTTCAGGGGTGCT]


>consensus_12131#3 TATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTA GAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTAT CGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCC AGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATTTAAGTAACATAT TGCCCGAGCTGAAAGGCATGGCGGTTGACATGGGCCCTGAGATTGACAGACAAACAAAGG CTTTGGGAGATTCAGAGAAGGACTTCGACGAACTGAATTTCAGGATCAAGGGAGCAAACA CTCGGGCACGCCGTTTGCTTGGAAAATAAACTGCAGAATATAATTTCATCCCAGGACAGG AGTCCTTCCATCCCTTTTACCCTTAGTTTTGTGGAGGATAATTAATTGTTTTGTGGGCCA TTGGTTTTGATGATTTTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCCTGGA TATGTCAGGGTATAATGTATTTGTATATTCTGCTATAGCCATTTTTCAGGGGTGCT



consensusID : consensus_12131#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 407
fasta sequence
                              [AGCTCGTGCCTTATTCGGCCCGAGCTCANATGGAGAAGGNTAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGGTGAATGCCACATTTTTCACTTTNNTTCATAAAAACTAATACACACTTGTTTTTTCTGAGATTGGCGTATTGTTATGTGGAATCCCTTTTTTGTGCTCTAATTCCNGCGTACTTTTATAGTTTGTACTAACTGCCAGTTTATGTTTAGTCCATTCTTTAAAAATTTTCACTTCTTCNTGCTGAACNAACTAAAAAAGAATAAAAAGTTTGGCCCAAGTACCTTCAAATTCCAGCGGCAAATTACTTCCTAATATCTAATCTGGAACACTTTGCATAATTA]

[+] EMBL AA753347             [AGCTCGTGCCTTATTCGGCCCGAGCTCANATGGAGAAGGNTAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGGTGAATGCCACATTTTTCACTTTNNTTCATAAAAACTAATACACACTTGTTTTTTCTGAGATTGGCGTATTGTTATGTGGAATCCCTTTTTTGTGCTCTAATTCCNGCGTACTTTTATAGTTTGTACTAACTGCCAGTTTATGTTTAGTCCATTCTTTAAAAATTTTCACTTCTTCNTGCTGAACNAACTAAAAAAGAATAAAAAGTTTGGCCCAAGTACCTTCAAATTCCAGCGGCAAATTACTTCCTAATATCTAATCTGGAACACTTTGCATAATTA]


>consensus_12131#4 AGCTCGTGCCTTATTCGGCCCGAGCTCANATGGAGAAGGNTAAGCAGGATGATGGCCTAT CTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACTGAGA TTGACAGGTGAATGCCACATTTTTCACTTTNNTTCATAAAAACTAATACACACTTGTTTT TTCTGAGATTGGCGTATTGTTATGTGGAATCCCTTTTTTGTGCTCTAATTCCNGCGTACT TTTATAGTTTGTACTAACTGCCAGTTTATGTTTAGTCCATTCTTTAAAAATTTTCACTTC TTCNTGCTGAACNAACTAAAAAAGAATAAAAAGTTTGGCCCAAGTACCTTCAAATTCCAG CGGCAAATTACTTCCTAATATCTAATCTGGAACACTTTGCATAATTA



consensusID : consensus_12131#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 390
fasta sequence
                              [AGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGANNNNNNCTACGACGNACTGAACTNCNNNATCNNNNNNNCNNNCACTNNNNCACNNCGTCTGCTTGNNNNNNNAACTGCNNNNNANN]

[+] EMBL CF196009             [AGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCTTCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGATGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGAAAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGACAAACAAAGGCTTTGGGAGATTCAGANNNNNNCTACGACGNACTGAACTNCNNNATCNNNNNNNCNNNCACTNNNNCACNNCGTCTGCTTGNNNNNNNAACTGCNNNNNANN]


>consensus_12131#5 AGTGGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATTCCT TCATTCGGAAGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCAC CTCAATCGAATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGA TGGAGAAGGCAAAGCAGGATGATGGCCTATCTGATCTAAGTAACATATTGACCGAGCTGA AAGGCATGGCGGTTGACATGGGCACTGAGATTGACAGACAAACAAAGGCTTTGGGAGATT CAGANNNNNNCTACGACGNACTGAACTNCNNNATCNNNNNNNCNNNCACTNNNNCACNNC GTCTGCTTGNNNNNNNAACTGCNNNNNANN



consensusID : consensus_12131#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 294
fasta sequence
                              [TGCGGCGTACAANGGCGGAGGAGACCACNTCAGCGGGTGCAGGGCTGCGTCCGCATCGCCGAGGAGATGAGGGATACCGCNGTCCAAGAGCCTCGGTCACCAATACACCAGCAGGGCCAAGCAGATCACGCGCACGCACAATGATTGACCCTCGACATCGACCAAGGATCTCTCCAAGGAGCGAGAAGCTGCNTGGGGTGATCTTTGGGGGGTATATTTTTCCAAAAANGTGGAAGCCAAAAAAAGAATTGGGAGAAATCAAGGGGGGCCTATTGCTAACTAGAGATGATTTCC]

[+] EMBL AU175017             [TGCGGCGTACAANGGCGGAGGAGACCACNTCAGCGGGTGCAGGGCTGCGTCCGCATCGCCGAGGAGATGAGGGATACCGCNGTCCAAGAGCCTCGGTCACCAATACACCAGCAGGGCCAAGCAGATCACGCGCACGCACAATGATTGACCCTCGACATCGACCAAGGATCTCTCCAAGGAGCGAGAAGCTGCNTGGGGTGATCTTTGGGGGGTATATTTTTCCAAAAANGTGGAAGCCAAAAAAAGAATTGGGAGAAATCAAGGGGGGCCTATTGCTAACTAGAGATGATTTCC]


>consensus_12131#6 TGCGGCGTACAANGGCGGAGGAGACCACNTCAGCGGGTGCAGGGCTGCGTCCGCATCGCC GAGGAGATGAGGGATACCGCNGTCCAAGAGCCTCGGTCACCAATACACCAGCAGGGCCAA GCAGATCACGCGCACGCACAATGATTGACCCTCGACATCGACCAAGGATCTCTCCAAGGA GCGAGAAGCTGCNTGGGGTGATCTTTGGGGGGTATATTTTTCCAAAAANGTGGAAGCCAA AAAAAGAATTGGGAGAAATCAAGGGGGGCCTATTGCTAACTAGAGATGATTTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12131#0      CTAATTCTTCCGATCTGTCCGCAGAGGTACGCGCAGTTATTTCTGGACCTTCTTGATAGT 60
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      TAAGGTCGATCTTGGTTACTGGAATTTATAAGGAATCGGGATTTGGTGTGTGTATTCTTG 120
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GCAAGTTGGCACGGGGGATGATCTTTGCCCAATTCAGTTTCATTTGTGCGCAGAAACTTG 180
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CTTGCTGCGGAATCTGACCCAAGGAGTTTTCGAGATGAGCGGGAGGAGATCGTTCTTCGC 240
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      ATCCAAGAAGCCGTCGCGGAGCAGCAACCCCTTCGACTCCGACTCCGACGATGGCGGGAG 300
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GGAGCAGAGACCGGCGAGGGCCTCCTCCGTGCCTCCTCCGGCCGACCAGCGGGGCTCCCT 360
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CTTCGGCGGCGGGGATGGCTTCTCCGCCTCGTCGGCGGCGGCGAGGAGCCGGTACAGGAA 420
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CGACTTCCGCGACACCGGCGGCGTGGAGGCCCAGTCGGTGCAGGAGCTGGAGGGCTACGC 480
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GGCGTACAAGGCGGAGGAGACCACTCAGCGGGTGCAGGGCTGCGTCCGCATCGCCGAGGA 540
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GATGAGGGATACCGCGTCCAAGAGCCTCGTCACCATACACCAGCAGGGCCAGCAGATCAC 600
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GCGCACGCACATGATGACCCTCGACATCGACCAGGATCTCTCCAGGGTAACTAACACAAA 660
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CTAATAACTAATACTATGTGATTACTCAGAAGCCTGATTAATTCTGTTTGATCACATAGT 720
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GGCGTAACAAGTCCCCACCAAAATTGGCCTGTTTCCTTCAGAATTCCATCCTTAATAAGT 780
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CCACGAAAACTGAAACAAACTTCGTGTCACACTTCAGAAATTAATTGCCAACTCCAAATT 840
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      TACTGTATTATGTGGTAATAATGGCTAAAGGGAATTCTTCGCACCTTTTCAGAGCGAGAA 900
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGTGGAAGCCAAAAAAGAATGGAGA 960
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      AATCAGGGGGCCTATGCTAACTAGAGGTAATCTCCAACTCTAGTCTTGAAATAGTAGACT 1020
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      GCAACAACAGTTGCTGACAGGGAAAGCTTGTACTATGTGGTATCACTTATCAGTTATGTT 1080
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------AGCAGATCACGCGCACGCACATGATGACCCTCGACATCGACC 42
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CTCTGTGTAACTAACTGGAAGGATGGAATTACTTGTATGCAGATGATTCCTTCATTCGGA 1140
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ---------------------------------------------TATTTTCCAAAAAGT 15
consensus_12131#5      ---------------------------------------------------------AGT 3
consensus_12131#1      AGGATCTCTCCAGGAGCGAGAAGCTGCTGGGTGATCTTGGGGGTATATTTTCCAAAAAGT 102
consensus_12131#2      -------------AACCATAAGGNTGGTAANATGGCNCCNGNTAAATTTGTTCGGTTAAT 47
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      AGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACCCACCTCAATCGA 1200
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      GGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATT---CCT 72
consensus_12131#5      GGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATT---CCT 60
consensus_12131#1      GGAAGCCAAAAAAGAATGGAGAAATCAGGGGGCCTATGCTAACTAGAGATGATT---CCT 159
consensus_12131#2      GGGGATGGGNGGAANATTCAANCGGGAAAGGTTGGCCGGTAACCCAGGTTGNATTAACCT 107
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      ATGCACGCCAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGTGGAGGTAATGCGCT 1260
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      TCATTCGGA---AGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACC 129
consensus_12131#5      TCATTCGGA---AGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACC 117
consensus_12131#1      TCATTCGGA---AGGGCAGCCATTTGGAACAAAGGCACAAACTGGGACTATCGGATCACC 216
consensus_12131#2      NAATAAAGGGACAAAAGNGGGGTTCCNCGNGGNGGCGCCGTTTAGGAATAGGGNNTCCCN 167
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      AAGACATATATGGTGATTGATTTGCTAAGTGTGTGTATTCTGATTATCTTGTTGTGTTGC 1320
consensus_12131#4      -----------------------------AGCTCGTGCCTTATTCGGCCCGA------GC 25
consensus_12131#3      CACCTCAATCGAATG-CACGC-CAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGT 187
consensus_12131#5      CACCTCAATCGAATG-CACGC-CAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGT 175
consensus_12131#1      CACCTCAATCGAATG-CACGC-CAATTCCATTCCGAGCCAACTTCAGCCCTCCAGAAAGT 274
consensus_12131#2      GGGNGCANGAAATNGGCAGGNGTTGNCCNGNATTTNGGCAGGGGCACCCNTCCAGGAAAG 227
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      TCAGATGGAG-AAGGCAAAGCAGG--ATGATGGCCTATCTGA-TCTAAGTAA-CATATTG 1375
consensus_12131#4      TCANATGGAG-AAGGNTAAGCAGG--ATGATGGCCTATCTGA-TCTAAGTAA-CATATTG 80
consensus_12131#3      GGAGATGGAG-AAGGCAAAGCAGG--ATGATGGCCTATCTGA-TTTAAGTAA-CATATTG 242
consensus_12131#5      GGAGATGGAG-AAGGCAAAGCAGG--ATGATGGCCTATCTGA-TCTAAGTAA-CATATTG 230
consensus_12131#1      GGAGATGGAG-AAGGCAAAGCAGG--ATGATGGCCTATCTGA-TCTAAGTAA-CATATTG 329
consensus_12131#2      GGAAATGGNGGAAGGCAAAGCNGG--NTGANGGCCTATTTGAATNTAAGTAAACATATTG 285
consensus_12131#6      TGCGGCGTACAANGGCGGAGGAGACCACNTCAGCGGGTGCAGGGCTGCGTCCGCATCGCC 60
                             *    * **   **  *         **   *       *  **   ***    

consensus_12131#0      ACCGAGCTGAAAGGCATGGCGGTTGA-CATGGGCACTGAGATTGACAGGTGAATGCCACA 1434
consensus_12131#4      ACCGAGCTGAAAGGCATGGCGGTTGA-CATGGGCACTGAGATTGACAGGTGAATGCCACA 139
consensus_12131#3      CCCGAGCTGAAAGGCATGGCGGTTGA-CATGGGCCCTGAGATTGACAGACAAACAA-AGG 300
consensus_12131#5      ACCGAGCTGAAAGGCATGGCGGTTGA-CATGGGCACTGAGATTGACAGACAAACAA-AGG 288
consensus_12131#1      ACCGAGCTGAAAGGCATGGCGGTTGA-CATGGGCACTGAGATTGACAGACAAACAA-AGG 387
consensus_12131#2      ACCGNAGTGGAAGGCATGGCGGTTGAACATGGGCACTGAGATTGACAGACAAACAA-AGG 344
consensus_12131#6      GAGGAGATGAGGGATACCGCNGTCCA--AGAGCCTCGGTCACCAATACACCAGCAG--GG 116
                          *   **   *  *  ** **  *  *  * * * *  *   * *    *        

consensus_12131#0      TTTTTCACTTTAGTTCATAAAAACTAAT-ACACACTTGTTTTTTC--TGAGATTGGCGTA 1491
consensus_12131#4      TTTTTCACTTTNNTTCATAAAAACTAAT-ACACACTTGTTTTTTC--TGAGATTGGCGTA 196
consensus_12131#3      CTTTGGG-AGATTCAGAGAAGGACTTCG-ACGAACTGAATTTCAGGATCAAGGGAGCAAA 358
consensus_12131#5      CTTTGGG-AGATTCAGANNNNNNCTACG-ACGNACTGAACTNCNNNATCNNNNNNNCNNN 346
consensus_12131#1      CTTTGGG-AGATTCAGAGAAGGACTACG-ACGAACTGAACTTCAGGATCAAGGGAGCAAA 445
consensus_12131#2      CTTTGGGGAGATTCAGAGAAGGACTACGGACGAACTGAACTTCAGGATCAAGGGAGCAAA 404
consensus_12131#6      CCAAGCA-GATCACGCGCACGCACAATG-----ATTGACCCTCGACATCGACCAAGGATC 170
                                              *         * *           *            

consensus_12131#0      TTGTTATGTGG--AATCCCTTTTTTGTGCTCTAATTCCAGCGTACTTTTATAGTTTGTAC 1549
consensus_12131#4      TTGTTATGTGG--AATCCCTTTTTTGTGCTCTAATTCCNGCGTACTTTTATAGTTTGTAC 254
consensus_12131#3      CACTCGGGCAC--GCCGTTTGCTTGGAAAATAAACTGCAGAATATAATTTCATCCCAGGA 416
consensus_12131#5      CACTNNNNCAC--NNCGTCTGCTTGNNNNNNNAACTGCNNNNNANN-------------- 390
consensus_12131#1      CACTCGGGCAC--GCCGTCTGCTTGGAAAATAAACTGCAGAATATAATTTCATCACAGGA 503
consensus_12131#2      CACTCGGGCAC--GCCGTCTGCTTGGAAAATAAACTGCAGAATATAATCTCATCACAGGA 462
consensus_12131#6      TCTCCAAGGAGCGAGAAGCTGCNTGGGGTGATCTTTGGGGGGTATATTTTTCCAAAAANG 230
                                          *   *           *       *                

consensus_12131#0      TAACTGCCAGTTTATGTTTAGTCCATTCTTTAAAAATTTTCACTTCTTCATGCTGAACGA 1609
consensus_12131#4      TAACTGCCAGTTTATGTTTAGTCCATTCTTTAAAAATTTTCACTTCTTCNTGCTGAACNA 314
consensus_12131#3      CAGGAGTCCTTCCATCCCTTTTACCCTTAGTTTTGTGGAGGATAATTAATTGTTTTGTGG 476
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      CAGGAGTCCTTCCATCCCTTTTACCCTTAGTTTTGTGGAGGATAATTAATTGTTTTGTGG 563
consensus_12131#2      CAGGAGTCCTTCCATCCCTTTTACCCTTAGTCTTGTGGAGGATAATTAATTGTTTTGTGG 522
consensus_12131#6      TGGAAGCCAAAAAAAGAATTGGGAGAAATCAAGGGGGGCCTATTGCTAACTAGAGATGAT 290
                                                                                   

consensus_12131#0      ACTAAAAAGGAGTAAAAAGTTTGGCCAAAGTACCTTCAAATTCAAGCGGCAAATTACTTC 1669
consensus_12131#4      ACTAAAAAAGAATAAAAAGTTTGGCCCAAGTACCTTCAAATTCCAGCGGCAAATTACTTC 374
consensus_12131#3      GCCATTGGTTTTGATGATTTTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCC 536
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      GCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCC 623
consensus_12131#2      GCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAATGGTTGGTCC 582
consensus_12131#6      TTCC-------------------------------------------------------- 294
                                                                                   

consensus_12131#0      CTAATATCTAATCTGGAACACTTTGCATAATTATATTTAAATCTGATGAGTATTGTTGCT 1729
consensus_12131#4      CTAATATCTAATCTGGAACACTTTGCATAATTA--------------------------- 407
consensus_12131#3      TGGATATGTCAGGGTATAATGTATTTGTATATTCTGCTATAGCCATTTTTCAGGGGTGCT 596
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      TGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCATTAGCCAGTAATGCT 683
consensus_12131#2      TGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCA--------------- 627
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      TTAACAGTCCAACCAATAAAAATCATCATGTGATATGTCTTTTTGTCTGTTGATTGGATT 1789
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      TTGTGCCATTGTTTTGGAAAAA-------------------------------------- 705
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CAGACAAACAAAGGCTTTGGGAGATTCAGAGAAGGACTACGACGAACTGAACTTCAGGAT 1849
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CAAGGGAGCAAACACTCGGGCACGCCGTCTGCTTGGAAAATAAACTGCAGAATATAATCT 1909
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CATCACAGGACAGGAGTCCTTCCATCCCTTTTACCCTTAGTCTTGTGGAGGATAATTAAT 1969
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      TGTTTTGTGGGCCATTGGTTCTGATGATTCTGTGCATCAGATTTTGATCAGTACGGTGAA 2029
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      TGGTTGGTCCTGGATATGTCAGGGTATAATGTATCTGTATATACTGCTATAGCCATTAGC 2089
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      CAGTAATGCTTTGTGCCATTGTTTTGGAATTTGGATCGTTCGCAATTGTTTCAAATCGCG 2149
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      TTAGCATCAATAAAATTAGCAATCTGCCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 2209
consensus_12131#4      ------------------------------------------------------------
consensus_12131#3      ------------------------------------------------------------
consensus_12131#5      ------------------------------------------------------------
consensus_12131#1      ------------------------------------------------------------
consensus_12131#2      ------------------------------------------------------------
consensus_12131#6      ------------------------------------------------------------
                                                                                   

consensus_12131#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2252
consensus_12131#4      -------------------------------------------
consensus_12131#3      -------------------------------------------
consensus_12131#5      -------------------------------------------
consensus_12131#1      -------------------------------------------
consensus_12131#2      -------------------------------------------
consensus_12131#6      -------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)