These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12134#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 893 fasta sequence [CTCTTTTTTTCTTTTTTCCTTTTTAGTTTTTTTTTGCTCATTTTTTTTTCTTTTATTCTCTAAATCTATTCTTTCATTTGTTAATTTTCTCTTCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAGTAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCTTTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGCTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC-GCCGCTCCGCCCGGGCTCGCGCCCC-GGTTTTGC-GC-G-CCGC-AGCTATTCCC-TTAGTGAGGTAATTTAGGTGCCTGCG] [+] EMBL CB677973 [CTCTTTTTTTCTTTTTTCCTTTTTAGTTTTTTTTTGCTCATTTTTTTTTCTTTTATTCTCTAAATCTATTCTTTCATTTGTTAATTTTCTCTTCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAGTAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCTTTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGCTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAA TTCTCATTTGAATATTTG ] [+] EMBL CB678007 [ CTTTTTTTCTTTATTCCATTTAAGTTTTTTTTTGCTCATTTTTTTTTCTTTTATTCTCCAAATCTATTCTTTCATTTGTTAATTTTCTCATCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAAAAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCATTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGATGGGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGATGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCAACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCTAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTAAACCGCCACTTCCCGGATCGGGAAATCTTAACCCGATTCCATTTCGGGGCACGCGCGAGGTCGC ] [+] EMBL CB677940 [ TTCCTTTTTAGTTTTTTTTCCCTCATTTTTTTTTCTTTTATTCTCTAAATCTATTCTTTCATTTGTTAATTTTCTCTTCACTTTTTTTCCGCTCTATTCTTCTTTTTCTCTTTCTTTTTCTATTCTTCTACTCAGTAATCTACTGATCATTTAATAAATTTTCTAAAGAAATAATGATTGCTGCTTCTTTCTTATCTTTTTGTTTTTCTTTTTCTTAATCTTCTTCTCTTTTCGTTTTTCTTCTTTCTCTTCTCTAATTCTTCTAATTCTCTAAATTCTAAATTTTAAATTCTCATCTCGCTATTGTCTTCTTCTAAGCTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGTTGCGGTTATGAATACGACCGGGCGTGGACGGTACTCGGCCCTCCGGATTTTCAAGGGCCGCCGGGGGCACACCGGACACCGCACGACGCGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTCGGGGGGCCct ] [-] EMBL BU673695 [ gaggCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGC AGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTC AAGTTCTCATTTGAATATTTGCTACTACCACC AGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGCGGCGG CCGC GCTATTCC TAGTGAGGTAATTTAGG ] [-] EMBL BU673522 [ CCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCCGGGTTTTGCGGC GACCGC AGCTATTCCCTTTAGTGAGGTAATTTAGGTG ] [-] EMBL CB965099 [ CCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGC GC GCCCGC AGCTATTCCC TTAGTGAGGTt ] [-] EMBL CB964755 [ CTGTTCACCTTGTAGACCTGATTCGCTTATGACTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGTGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGTCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGC GC G CCGC AGCTATTCCC TTAGTGAGGT ATTTAGct ] [-] EMBL BU672892 [ ACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCC GG TTGC GC G CCGCAAGCTATTCCC ATAGTGAGG ] [-] EMBL BU673402 [ ACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGAC GCCGCTCCGCCCGGGCTCGCGCCCC GGGTTTGC GC G CGCAAGCTATTCCC TTTATGAG ] [-] EMBL BU672940 [ CTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCC GGTTTTGC GC G CCCA AGCTATTCCCTTTAGTGAGGAAATTTAGCTGCCTGCG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||