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Oryza sativa
cluster # 12136 cluster # 12136       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12136#0 length = 1427 sequences # 7  
consensus_12136#1 length = 538 sequences # 1  
consensus_12136#2 length = 436 sequences # 1  
consensus_12136#3 length = 204 sequences # 1  

consensusID : consensus_12136#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1427
fasta sequence
                              [CCCTCTCTCTCTCGCCTCACCACCGCCGTCGTCGTCGCCGCCGCCGCAACCCTCGCCGCCGGCGCTAGGCTCGCGACTCCGACGATGTCGGCGCCATCCGACCCCGCCGTGGCCACCCACCCGCAGGCGGGCGCCGCCGCGGCGGCGTCCTCCAGCAGCGGCCTCACCTTCAAGCTCCACCCCCTCGTCATCGTGAACGTCTCCGACCACCACACCCGCGTGAAGGCCCAGGCGGCGTGCTCCGGCGACGGGGCCTCGTCTGCGGCGGCGGGGGGGC-AGCCGCCGAGGGTGTTCGGGTGCGTGATCGGGGTGCAGCGCGGGCGGACGGTGGAGATCTTCAACAGCTTCGAGCTCGTCCTCGACCCTGTCTCCGGGACCCTCGACCGCGCCTTCCTCGAGAAAAAGCAGGAGCTCTATAAGAAGGTTTTCCCCGACTTCTATGTGCTGGGTTGGTACTCCACTGGAAGCGATGTGCGGGACACTGATATGCAAATCCACAAGGCTCTGATGGACATTAACGAAAGTCCCGTTTATCTTCTTTTGAATCCTGCAATCAACCTCTCCCAGAAGGATCTCCCTGTAACAATTTATGAGAGTGAGTTGCATGTTATCGATGGGAGTCCGCAGCTCATCTTTGTCAGAGCTAATTATACAATTGAGACTGTAGAGGCAGAGAGGATATCTGTTGATCATGTTGCCCATCTCAAACCATCTGATGGTGGCTCTGCGGCGACTCAATTGGCTGCTCATCTGACAGGAATACACAGTGCCATCAAGATGCTCAATAGCAGGGTCCGTGTTATCCATCAATATCTTGTTTCCATGCAGAAAGGTGATATG-CCACT-GGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTAGTAAGAAGGCTACCAGCAATGGAGTCAGAAAAATTCCAAGATGACTTCCTAATGGAATACA-ATGACACCCTCCTCATGACTTACCTTGCTATGTTCACTAACTGTTCAAGCAC-AATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGAT-TTTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGTTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCCAAACTCATGCTCCCTCGTTCAGGATTGACA-CGGCA-AACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATC-ACCCCCATGGTAGTTACACTA-TTTGACT-CCCTAAATGGATATGGATGCAGGTTTCCTGAGTTATGCTTGTAAATTTTTTTAGGGTTAACNTGTATGTATGGATGTTGG]

[+] EMBL AK058215             [CCCTCTCTCTCTCGCCTCACCACCGCCGTCGTCGTCGCCGCCGCCGCAACCCTCGCCGCCGGCGCTAGGCTCGCGACTCCGACGATGTCGGCGCCATCCGACCCCGCCGTGGCCACCCACCCGCAGGCGGGCGCCGCCGCGGCGGCGTCCTCCAGCAGCGGCCTCACCTTCAAGCTCCACCCCCTCGTCATCGTGAACGTCTCCGACCACCACACCCGCGTGAAGGCCCAGGCGGCGTGCTCCGGCGACGGGGCCTCGTCTGCGGCGGCGGGGGGGC AGCCGCCGAGGGTGTTCGGGTGCGTGATCGGGGTGCAGCGCGGGCGGACGGTGGAGATCTTCAACAGCTTCGAGCTCGTCCTCGACCCTGTCTCCGGGACCCTCGACCGCGCCTTCCTCGAGAAAAAGCAGGAGCTCTATAAGAAGGTTTTCCCCGACTTCTATGTGCTGGGTTGGTACTCCACTGGAAGCGATGTGCGGGACACTGATATGCAAATCCACAAGGCTCTGATGGACATTAACGAAAGTCCCGTTTATCTTCTTTTGAATCCTGCAATCAACCTCTCCCAGAAGGATCTCCCTGTAACAATTTATGAGAGTGAGTTGCATGTTATCGATGGGAGTCCGCAGCTCATCTTTGTCAGAGCTAATTATACAATTGAGACTGTAGAGGCAGAGAGGATATCTGTTGATCATGTTGCCCATCTCAAACCATCTGATGGTGGCTCTGCGGCGACTCAATTGGCTGCTCATCTGACAGGAATACACAGTGCCATCAAGATGCTCAATAGCAGGGTCCGTGTTATCCATCAATATCTTGTTTCCATGCAGAAAGGTGATATG CCACT GGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTAGTAAGAAGGCTACCAGCAATGGAGTCAGAAAAATTCCAAGATGACTTCCTAATGGAATACA ATGACACCCTCCTCATGACTTACCTTGCTATGTTCACTAACTGTTCAAGCAC AATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGAT TTTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGTTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCCAAACTCATGCTCCCTCGTTCAGGATTGACA CGGCA AACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATC ACCCCCATGGTAGTTACACTA TTTGACT CCCTAAATGGATATGGATGCAGGTTTCCTGAGTTATGCTTGT                                      ]
[+] EMBL AF072848             [            CGCCTCACCACCGCCGTCGTCGTCGCCGCCGCCGCAACCCTCGCCGCCGGCGCTAGGCTCGCGACTCCGACGATGTCGGCGCCATCCGACCCCGCCGTGGCCACCCACCCGCAGGCGGGCGCCGCCGCGGCGGCGTCCTCCAGCAGCGGCCTCACCTTCAAGCTCCACCCCCTCGTCATCGTGAACGTCTCCGACCACCACACCCGCGTGAAGGCCCAGGCGGCGTGCTCCGGCGACGGGGCCTCGTCTGCGGCGGCGGGGGGGCAAGCCGCCGAGGGTGTTCGGGTGCGTGATCGGGGTGCAGCGCGGGCGGACGGTGGAGATCTTCAACAGCTTCGAGCTCGTCCTCGACCCTGTCTCCGGGACCCTCGACCGCGCCTT CTCGAGAAAAAGCAGGAGCTCTATAAGAAGGTTTTCCCCGACTTCTATGTGCTGGGTTGGTACTCCACTGGAAGCGATGTGCGGGACACTGATATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA764823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aaggggATAGCAGGGTCCGTGTTATCCATCAATATCTTGTTTCCATGCAGAAAGGTGATATG CCACT GGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTAGTAAGAAGGCTACCAGCAATGGAGTCAGAAAAATTCCAAGATGACTTCCTAATGGAATACA ATGACACCCTCCTCATGACTTACCTTGCTATGTTCACTAACTGTTCAAGCAC AATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGAT TTTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGNTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCCAAACTCATGCTCCCTCGTTCAGGATTGACA CGGCA AACATGTCGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGT AAGNTTATCCCCATC ACCCCCATGGTAGTTACACTATTTTGACTNCCCTAA                                                                          ]
[-] EMBL CB638443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAATATCTTGTTTCCATGCAGAAAGGTGATATG CCACT GGACAATTCGCTGCTTAGGCAAGTCTCAAGCTTAGTAAGAAGGCTACCAGCAATGGAGTCAGAAAAATTCCAAGATGACTTCTTAATGGAATACA ATGACACCCTCTTCATGACTTACCTTGCTATGTTCACTAACTGTTCAAGCAC AATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGAT TTTCCCCTTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGTTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCCAAACTCATGCTCCCTCGTTCAGGATTGACA CGGCA AACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATC ACCCCCATGGTAGTTACACTA TTTGACT CCCTAAATGGATATGGATGCAGGTTTCCTGAGTTATGCTTGTAAATTTTTTTAGGGTTAACNTGTATGTATGGATGTTGG]
[+] EMBL BM418796             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAAGGTGATATGCCCACTGGGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTAGTAAGAAGGCTACCAGCAATGGAGTCAG AAAATTCCAAGATGACTTCCTAATGGAATACANATGACACCCTCCTCATGACTTACCTTGCTATGTTCACTAACTGTTCAAGCAC NATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGAT TTTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGTTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCCAAACTCATGCTCCCTCGTTCAGGATTGACA CGGCA AACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATCTACCCCCATGGTAGTTACACTA TTTGACT CCCTAAAaaaaaaa                                                                  ]
[+] EMBL BI812177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTTCCTAATGGAATACACATGACACCCTCCTCATGACTTACCTTGCTATGTTCACTAACTGTTCAAGCACAAATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTG CAGGAGAGGA GCCGAGGTGCTTTCATGTAGATGTTTCCCCCTTCGGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGTTACCCATATGG CAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCCAAACTCATGCTCCCTCGTTCAGGATTGACA CGGCACAACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATC ACCCCCATGGTAGTTACACTA TTTGACT CCCTAAATGGATATGGATGCAGGTTTCCTGAaaaaaaaaa                                        ]
[+] EMBL BI812176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTTCCTAATGGAATACC ATGACACCCTCCTCATGACTTACCTTGCTATGTTCCCTAACTGTTCAAGCCC AATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGAT TTTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGTTACCCATATGG CAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCCCAACTCATGCTCCCTCGTTCAGGATTGACACCGGCA AACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTC CCAAGATTGACATGTAAAGTTTATCCCCATC ACCCCCATGGTAGTTACACTA TTTGACT CCCTAAATGGATATGGATGCAGGTTTCCTGAaaaaaaaaa                                        ]


>consensus_12136#0 CCCTCTCTCTCTCGCCTCACCACCGCCGTCGTCGTCGCCGCCGCCGCAACCCTCGCCGCC GGCGCTAGGCTCGCGACTCCGACGATGTCGGCGCCATCCGACCCCGCCGTGGCCACCCAC CCGCAGGCGGGCGCCGCCGCGGCGGCGTCCTCCAGCAGCGGCCTCACCTTCAAGCTCCAC CCCCTCGTCATCGTGAACGTCTCCGACCACCACACCCGCGTGAAGGCCCAGGCGGCGTGC TCCGGCGACGGGGCCTCGTCTGCGGCGGCGGGGGGGCAGCCGCCGAGGGTGTTCGGGTGC GTGATCGGGGTGCAGCGCGGGCGGACGGTGGAGATCTTCAACAGCTTCGAGCTCGTCCTC GACCCTGTCTCCGGGACCCTCGACCGCGCCTTCCTCGAGAAAAAGCAGGAGCTCTATAAG AAGGTTTTCCCCGACTTCTATGTGCTGGGTTGGTACTCCACTGGAAGCGATGTGCGGGAC ACTGATATGCAAATCCACAAGGCTCTGATGGACATTAACGAAAGTCCCGTTTATCTTCTT TTGAATCCTGCAATCAACCTCTCCCAGAAGGATCTCCCTGTAACAATTTATGAGAGTGAG TTGCATGTTATCGATGGGAGTCCGCAGCTCATCTTTGTCAGAGCTAATTATACAATTGAG ACTGTAGAGGCAGAGAGGATATCTGTTGATCATGTTGCCCATCTCAAACCATCTGATGGT GGCTCTGCGGCGACTCAATTGGCTGCTCATCTGACAGGAATACACAGTGCCATCAAGATG CTCAATAGCAGGGTCCGTGTTATCCATCAATATCTTGTTTCCATGCAGAAAGGTGATATG CCACTGGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTAGTAAGAAGGCTACCAGCAATG GAGTCAGAAAAATTCCAAGATGACTTCCTAATGGAATACAATGACACCCTCCTCATGACT TACCTTGCTATGTTCACTAACTGTTCAAGCACAATGAATGAGCTGGTCGAGAAGTTTAAC GCGACATACGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGATTTTC CCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTTTGGAAATAGTTACCCATATGGC CAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGCAGCCATCAAGTTTCTTCC AAACTCATGCTCCCTCGTTCAGGATTGACACGGCAAACATGTTGATATTCTTGATTCTGT GCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATCA CCCCCATGGTAGTTACACTATTTGACTCCCTAAATGGATATGGATGCAGGTTTCCTGAGT TATGCTTGTAAATTTTTTTAGGGTTAACNTGTATGTATGGATGTTGG



consensusID : consensus_12136#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 538
fasta sequence
                              [TCTGCATAGCCTAGTAAGAAGGCTACCAGCACATGGAGTCAGATGAAATTCCAAGATGACTTCCTAATGGAATACAATGACACCCTCCTCATGACTTACCTNGCTATGTTCACTATACTGTTCAAGCACAGATGAATGAGCTGGTCGAGAAGTTTAACGCGACATAGCGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGATTGTTCCCCCTTCGTGCATCTTGCAGCGTGGGTGTCTCTGCAGTGAGATTTTGGAAATAGGTTACCCATATGGCCAGGAAGTGTTTTGCGTTATAAGTCGTGTTTAGGAACGTATATCGTGGCAAGCCAGTCAAGAGTTTCTTCCACAACGTCAGTGCTCACCGTCGTGTCAGGAGTTGAACACCGGGCAAAACAGTGTTGAGTAGTGTCGTTGAAGTTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATCACCCCCATGGTAGTTACACTATTTGACTCCCTAAAAAAAAAA]

[+] EMBL BM419983             [TCTGCATAGCCTAGTAAGAAGGCTACCAGCACATGGAGTCAGATGAAATTCCAAGATGACTTCCTAATGGAATACAATGACACCCTCCTCATGACTTACCTNGCTATGTTCACTATACTGTTCAAGCACAGATGAATGAGCTGGTCGAGAAGTTTAACGCGACATAGCGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGATTGTTCCCCCTTCGTGCATCTTGCAGCGTGGGTGTCTCTGCAGTGAGATTTTGGAAATAGGTTACCCATATGGCCAGGAAGTGTTTTGCGTTATAAGTCGTGTTTAGGAACGTATATCGTGGCAAGCCAGTCAAGAGTTTCTTCCACAACGTCAGTGCTCACCGTCGTGTCAGGAGTTGAACACCGGGCAAAACAGTGTTGAGTAGTGTCGTTGAAGTTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATCACCCCCATGGTAGTTACACTATTTGACTCCCTAAAAAAAAAA]


>consensus_12136#1 TCTGCATAGCCTAGTAAGAAGGCTACCAGCACATGGAGTCAGATGAAATTCCAAGATGAC TTCCTAATGGAATACAATGACACCCTCCTCATGACTTACCTNGCTATGTTCACTATACTG TTCAAGCACAGATGAATGAGCTGGTCGAGAAGTTTAACGCGACATAGCGAGAGGTCGACT GCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAGATTGTTCCCCCTTCGTGCATCTTGCAG CGTGGGTGTCTCTGCAGTGAGATTTTGGAAATAGGTTACCCATATGGCCAGGAAGTGTTT TGCGTTATAAGTCGTGTTTAGGAACGTATATCGTGGCAAGCCAGTCAAGAGTTTCTTCCA CAACGTCAGTGCTCACCGTCGTGTCAGGAGTTGAACACCGGGCAAAACAGTGTTGAGTAG TGTCGTTGAAGTTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGT AAAGTTTATCCCCATCACCCCCATGGTAGTTACACTATTTGACTCCCTAAAAAAAAAA



consensusID : consensus_12136#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 436
fasta sequence
                              [ACAATGACACCCTCCTCANGACGTTACCTTGCTATGTTCACGTAACTGTTCAAGCACAATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGCCGAGGTGCTTTCATGTAGAGTTNTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTGTTGGAAATAGTTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGGCAGCCATCAAGTTTCGTTCCAACTCATGCTGCCCTCGTTCAGGATTGACANCGCGCAAACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCNTCACCCCCNTGGTAGTTACACTATTTGACTCCCTACCCCAAAAAAAAAA]

[+] EMBL BM419031             [ACAATGACACCCTCCTCANGACGTTACCTTGCTATGTTCACGTAACTGTTCAAGCACAATGAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGCCGAGGTGCTTTCATGTAGAGTTNTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGATTGTTGGAAATAGTTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTATATCTGGGCAGCCATCAAGTTTCGTTCCAACTCATGCTGCCCTCGTTCAGGATTGACANCGCGCAAACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCNTCACCCCCNTGGTAGTTACACTATTTGACTCCCTACCCCAAAAAAAAAA]


>consensus_12136#2 ACAATGACACCCTCCTCANGACGTTACCTTGCTATGTTCACGTAACTGTTCAAGCACAAT GAATGAGCTGGTCGAGAAGTTTAACGCGACATACGAGAGGTCGACTGCCAGGAGAGGAGC CGAGGTGCTTTCATGTAGAGTTNTCCCCCTTCTGCATCTGCAGCTGGTTCTCTGCTGAGA TTGTTGGAAATAGTTACCCATATGGCCAGGAAGTTTTTGCGTATAATCTGTTAGGAACTA TATCTGGGCAGCCATCAAGTTTCGTTCCAACTCATGCTGCCCTCGTTCAGGATTGACANC GCGCAAACATGTTGATATTCTTGATTCTGTGCCTAGATCGTTGTTTATTCCTCATTCGCC AAGATTGACATGTAAAGTTTATCCCCNTCACCCCCNTGGTAGTTACACTATTTGACTCCC TACCCCAAAAAAAAAA



consensusID : consensus_12136#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 204
fasta sequence
                              [TCTGGTTAAGGAACTATATCTGCAAGCCATCAAGTTTCTTCCAAAACTCATGCTCCCTCGTTCAGGATGACACGGCAAACATGTTGATATTCTGGATTCGGGCCCTAGATCGTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTGTATCCCCATCACCCCCANGGTGAGTGTACACTATTGGACTCCCTGGGGGGGAAA]

[+] EMBL BM419572             [TCTGGTTAAGGAACTATATCTGCAAGCCATCAAGTTTCTTCCAAAACTCATGCTCCCTCGTTCAGGATGACACGGCAAACATGTTGATATTCTGGATTCGGGCCCTAGATCGTGTTTATTCCTCATTCGCCAAGATTGACATGTAAAGTGTATCCCCATCACCCCCANGGTGAGTGTACACTATTGGACTCCCTGGGGGGGAAA]


>consensus_12136#3 TCTGGTTAAGGAACTATATCTGCAAGCCATCAAGTTTCTTCCAAAACTCATGCTCCCTCG TTCAGGATGACACGGCAAACATGTTGATATTCTGGATTCGGGCCCTAGATCGTGTTTATT CCTCATTCGCCAAGATTGACATGTAAAGTGTATCCCCATCACCCCCANGGTGAGTGTACA CTATTGGACTCCCTGGGGGGGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12136#0      CCCTCTCTCTCTCGCCTCACCACCGCCGTCGTCGTCGCCGCCGCCGCAACCCTCGCCGCC 60
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      GGCGCTAGGCTCGCGACTCCGACGATGTCGGCGCCATCCGACCCCGCCGTGGCCACCCAC 120
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      CCGCAGGCGGGCGCCGCCGCGGCGGCGTCCTCCAGCAGCGGCCTCACCTTCAAGCTCCAC 180
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      CCCCTCGTCATCGTGAACGTCTCCGACCACCACACCCGCGTGAAGGCCCAGGCGGCGTGC 240
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      TCCGGCGACGGGGCCTCGTCTGCGGCGGCGGGGGGGCAGCCGCCGAGGGTGTTCGGGTGC 300
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      GTGATCGGGGTGCAGCGCGGGCGGACGGTGGAGATCTTCAACAGCTTCGAGCTCGTCCTC 360
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      GACCCTGTCTCCGGGACCCTCGACCGCGCCTTCCTCGAGAAAAAGCAGGAGCTCTATAAG 420
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      AAGGTTTTCCCCGACTTCTATGTGCTGGGTTGGTACTCCACTGGAAGCGATGTGCGGGAC 480
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      ACTGATATGCAAATCCACAAGGCTCTGATGGACATTAACGAAAGTCCCGTTTATCTTCTT 540
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      TTGAATCCTGCAATCAACCTCTCCCAGAAGGATCTCCCTGTAACAATTTATGAGAGTGAG 600
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      TTGCATGTTATCGATGGGAGTCCGCAGCTCATCTTTGTCAGAGCTAATTATACAATTGAG 660
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      ACTGTAGAGGCAGAGAGGATATCTGTTGATCATGTTGCCCATCTCAAACCATCTGATGGT 720
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      GGCTCTGCGGCGACTCAATTGGCTGCTCATCTGACAGGAATACACAGTGCCATCAAGATG 780
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      CTCAATAGCAGGGTCCGTGTTATCCATCAATATCTTGTTTCCATGCAGAAAGGTGATATG 840
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      ------------------------------------------------------------
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      CCACTGGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTAGTAAGAAGGCTACCAGCA-AT 899
consensus_12136#2      ------------------------------------------------------------
consensus_12136#1      --------------------------TCTGCATAGCCTAGTAAGAAGGCTACCAGCACAT 34
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      GGAGTCAGA-AAAATTCCAAGATGACTTCCTAATGGAATACAATGACACCCTCCTCATGA 958
consensus_12136#2      ---------------------------------------ACAATGACACCCTCCTCANGA 21
consensus_12136#1      GGAGTCAGATGAAATTCCAAGATGACTTCCTAATGGAATACAATGACACCCTCCTCATGA 94
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      C-TTACCTTGCTATGTTCAC-TAACTGTTCAAGCACA-ATGAATGAGCTGGTCGAGAAGT 1015
consensus_12136#2      CGTTACCTTGCTATGTTCACGTAACTGTTCAAGCACA-ATGAATGAGCTGGTCGAGAAGT 80
consensus_12136#1      C-TTACCTNGCTATGTTCACTATACTGTTCAAGCACAGATGAATGAGCTGGTCGAGAAGT 153
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      TTAACGCGACATA-CGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAG 1074
consensus_12136#2      TTAACGCGACATA-CGAGAGGTCGACTGCCAGGAGAGGAG-CCGAGGTGCTTTCATGTAG 138
consensus_12136#1      TTAACGCGACATAGCGAGAGGTCGACTGCCAGGAGAGGAGGCCGAGGTGCTTTCATGTAG 213
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      A-TTTTCCCCCTTC-TGCATCT-GCAGCT--GGT-TCTCTGC--TGAGATT-TTGGAAAT 1125
consensus_12136#2      AGTTNTCCCCCTTC-TGCATCT-GCAGCT--GGT-TCTCTGC--TGAGATTGTTGGAAAT 191
consensus_12136#1      ATTGTTCCCCCTTCGTGCATCTTGCAGCGTGGGTGTCTCTGCAGTGAGATT-TTGGAAAT 272
consensus_12136#3      ------------------------------------------------------------
                                                                                   

consensus_12136#0      AG-TTACCCATATGGCCAGGAAGT-TTTTGCGT-ATAATCTGT---TAGGAAC-TATATC 1178
consensus_12136#2      AG-TTACCCATATGGCCAGGAAGT-TTTTGCGT-ATAATCTGT---TAGGAAC-TATATC 244
consensus_12136#1      AGGTTACCCATATGGCCAGGAAGTGTTTTGCGTTATAAGTCGTGTTTAGGAACGTATATC 332
consensus_12136#3      --------------------------------------TCTGG-TTAAGGAAC-TATATC 20
                                                                *     ****** ******

consensus_12136#0      -TGG-CAGCCA-TCAAG--TTTCTTCCA-AAC-TCA-TGCT--CCCTCGT-TCAGGATT- 1226
consensus_12136#2      -TGGGCAGCCA-TCAAG--TTTCGTTCC-AAC-TCA-TGCTG-CCCTCGT-TCAGGATT- 294
consensus_12136#1      GTGGCAAGCCAGTCAAGAGTTTCTTCCACAACGTCAGTGCTCACCGTCGTGTCAGGAGTT 392
consensus_12136#3      --TGCAAGCCA-TCAAG--TTTCTTCCAAAAC-TCA-TGCT--CCCTCGT-TCAGGAT-- 68
                          *  ***** *****  **** * *  *** *** ****  ** **** ******   

consensus_12136#0      -GACACGGC---AAACA-TGTTGA----TATTCTTGA--TTCTGTGCCTAGATCGTTGTT 1275
consensus_12136#2      -GACANCGCGC-AAACA-TGTTGA----TATTCTTGA--TTCTGTGCCTAGATCGTTGTT 345
consensus_12136#1      GAACACCGGGCAAAACAGTGTTGAGTAGTGTCGTTGAAGTTCTGTGCCTAGATCGTTGTT 452
consensus_12136#3      -GACACGGC---AAACA-TGTTGA----TATTCTGGA--TTCGGGCCCTAGATCGT-GTT 116
                         ***  *    ***** ******    * *  * **  *** *  ********** ***

consensus_12136#0      TATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATCACCCCCATGGT-AGT- 1333
consensus_12136#2      TATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCNTCACCCCCNTGGT-AGT- 403
consensus_12136#1      TATTCCTCATTCGCCAAGATTGACATGTAAAGTTTATCCCCATCACCCCCATGGT-AGT- 510
consensus_12136#3      TATTCCTCATTCGCCAAGATTGACATGTAAAGTGTATCCCCATCACCCCCANGGTGAGTG 176
                       ********************************* ******* ********  *** *** 

consensus_12136#0      TACACTATTTGACTCCCTAAATGGATATGGATGCAGGTTTCCTGAGTTATGCTTGTAAAT 1393
consensus_12136#2      TACACTATTTGACTCCCTACCCCAAAAAAAAAA--------------------------- 436
consensus_12136#1      TACACTATTTGACTCCCTAAAAAAAAAA-------------------------------- 538
consensus_12136#3      TACACTATTGGACTCCCTGGGGGGGAAA-------------------------------- 204
                       ********* ********        *                                 

consensus_12136#0      TTTTTTAGGGTTAACNTGTATGTATGGATGTTGG 1427
consensus_12136#2      ----------------------------------
consensus_12136#1      ----------------------------------
consensus_12136#3      ----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)