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Oryza sativa
cluster # 12139 cluster # 12139       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12139#0 length = 1461 sequences # 7  
consensus_12139#1 length = 354 sequences # 1  
consensus_12139#2 length = 290 sequences # 1  
consensus_12139#3 length = 246 sequences # 1  

consensusID : consensus_12139#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1461
fasta sequence
                              [ACCCAGACTTCCAGACTCAAGAGGCGAGGGCTTCCCAATGGGCAACATCGCGAGCAGCGGCGGCGCTAGCCCACGTCCGCCGCCGCCGCATCTCGAAGCCTATAGACACGGGGTGCCGCCCCCGTACTACCACAGCTACCCTCGTCCGCCCCCCGGCGCCGCCGCGCCGCCGCCGGTGCCGGTGCCTGCGCACGTGGAGCGGCACAGGGCCGTGGCGGTCAACGTCGGCGTCAACGTCAAGGGGGACACCCTGCGGCTGGTGCCCGACGACGACGACGACGATGGCCGCAGCCTACTCCTCGCCTTCTCCTTCGACGCCGATGGCCCCGGAAGCATAACTGTCTGCTTCTTTGCACAAGAAGATAAGTGTGCCTTGAAGACCGCAAAGGAAAATTTGCTTCAACCTGTGACCGTGCCTTTTAAGGAAGGTCGAGGTCAGGAGTTCAAGCAACCAAGTGGGTCGGGAATCGATGTCTCTCGTTTTGAGGAATCTGAGCTAACTAATGTTGGGGAAGGTGGTGTATTCCCTGTAGCATTCAAAGTACAAATGGATGTGTCAGGCAACCAAGAATCAGAAGGGGCACATGAGACCGAACAATCGAAATATCTTGTTAAATATGCTATATTTGTGAAGAAAGACAATGCTGAATATGGAGTTCATGTTGTGCAGCAGATCCTTTGGGTAAATGGAATCAGATATGTCTTGCAGGAAATATATGGTATTGGGAACACAGCTGATAAGAATGCTCATGAGGATGATTCCGGGAAAGAATGTGTGGTTTGCCTTTCTGAACCAAGAGATACTGCTGTTCTTCCATG-CAGGCATATGTGCCTGTG-CAGGGAGTGTGCT-CAAGTTTTAAAATATCAGACCAACAAATGCCCAATATGCAGGCAACCTGTTGAGGGCCTTCGCGAGATAGAGGTTGATAACAAACCGATCCCCCAACAAGGATCTCAGCAGTTAACAGCACCTCAATAAAGTCTCATCTGATTGCAAGCAAACTACCTGTACATATGTCATGTGTATATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAACAAAGCTGTTTCTGATA---TTTTG-T-TAAAGGATGAACCTACTGGGATTTAATTGTCTAC-GTTTGGACCACCAAACTCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTTGCAGGGGACAATCGTTTTCTTGTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAGCATACGATGTGTTCTTTCTAGTGGATGCCCTTATTGTTCTGTGATGTCACCAATTGGAAGTTTTTCCTCCTACTGGCATGTCCCTGGGAAGACAAGCCAGGCAACATTTTGGTGCTACTTTTACCATGCTTTAGATCTTACTATTACAAGATTATGTAGATCGACNATCCTTTTTGGGTTAAAAAAAAAA]

[+] EMBL AK067148             [ACCCAGACTTCCAGACTCAAGAGGCGAGGGCTTCCCAATGGGCAACATCGCGAGCAGCGGCGGCGCTAGCCCACGTCCGCCGCCGCCGCATCTCGAAGCCTATAGACACGGGGTGCCGCCCCCGTACTACCACAGCTACCCTCGTCCGCCCCCCGGCGCCGCCGCGCCGCCGCCGGTGCCGGTGCCTGCGCACGTGGAGCGGCACAGGGCCGTGGCGGTCAACGTCGGCGTCAACGTCAAGGGGGACACCCTGCGGCTGGTGCCCGACGACGACGACGACGATGGCCGCAGCCTACTCCTCGCCTTCTCCTTCGACGCCGATGGCCCCGGAAGCATAACTGTCTGCTTCTTTGCACAAGAAGATAAGTGTGCCTTGAAGACCGCAAAGGAAAATTTGCTTCAACCTGTGACCGTGCCTTTTAAGGAAGGTCGAGGTCAGGAGTTCAAGCAACCAAGTGGGTCGGGAATCGATGTCTCTCGTTTTGAGGAATCTGAGCTAACTAATGTTGGGGAAGGTGGTGTATTCCCTGTAGCATTCAAAGTACAAATGGATGTGTCAGGCAACCAAGAATCAGAAGGGGCACATGAGACCGAACAATCGAAATATCTTGTTAAATATGCTATATTTGTGAAGAAAGACAATGCTGAATATGGAGTTCATGTTGTGCAGCAGATCCTTTGGGTAAATGGAATCAGATATGTCTTGCAGGAAATATATGGTATTGGGAACACAGCTGATAAGAATGCTCATGAGGATGATTCCGGGAAAGAATGTGTGGTTTGCCTTTCTGAACCAAGAGATACTGCTGTTCTTCCATG CAGGCATATGTGCCTGTG CAGGGAGTGTGCT CAAGTTTTAAAATATCAGACCAACAAATGCCCAATATGCAGGCAACCTGTTGAGGGCCTTCGCGAGATAGAGGTTGATAACAAACCGATTCCCCAACAAGGATCTCAGCAGTTAACAGCACCTCAATAAAGTCTCATCTGATTGCAAGCAAACTACCTGTACATGTGTCATGTGTATATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAACAAAGCTGTTTCTGATA   TTTTG T TAAAGAATGAACCTACTGGGATTTAATTGTCTAC GTTTGGACCACCAAACTCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTTGCAGGGGACAATCGTTTTCTTGTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAGCATACGATGTGTTC                                                                                                                                                                                ]
[+] EMBL AU068079             [                                                CGCGAGCAGCGGCGGCGCTAGCCACCGTCCGCCGCCGCCGCATCTCGAAGCCTATAGACACGGGGTGCCGCCCCCGTACTACCACAGCTACCCTCGTCCGCCCCCCGGCGCCGCCGCGCCGCCGCCGGTGCCGGTGCCTGCGCACGTGGAGCGGCACAGGGCCGTGGNGGTCAGCGTCGGCGTCAACGTCAAGGGGGACACCCTGCGGCTGGTGCCCGACGACGACGACGACGATGGCCGCAGCCTACTCCTCGCCTTCTCCTTCGACGCCGATNGCCCCGGAAGCATAACTGTCTGCTTCTTTGCACAAGAAGATAAGTGTGCCTTGAAGACCGCAAAGGAAAATTTGCTTCAACCTGTGACCGTGCCTTTTAAGGAAGGTCGAGGTCAGGNGTTCAAGCAACCAAGTGGGTCGGGAATCGATGTCTCTCGTTTTGAGGAATCTGAGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CA759802             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agacAAGGGGCACATGAGACCGAACAATCGAAATATCTTGTTAAATATGCTATATTTGTGAAGAAAGACAATGCTGAATATGGAGTTCATGTTGTGCAGCAGATCCTTTGGGTAAATGGAATNAGATATGTCTTGCAGGAAATATATGGTATTGGGAACACAGCTGATAAGAATGCTCATGAGGATGATTCCGGGAAAGAATGTGTGGTTTGCCTTTCTGAACCAAGAGATACTGCTGTTCTTCCATG CAGGCATATGTGCCTGTG CAGGGAGTGTGCT CAAGTTTTAAAATATCAGACCAACAAATGCCCAATATGCAGGCAACCTGTTGAGGGCCTTCGCGAGATAGAGGTTGATAACAAACCGATCCCCCAACAAGGATCTCAGCAGTTAACAGCACCTCAATAAAGAGACATCTGATTGCAAGCAAACTGCCTGTACATATGTCATTTGTATATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAACAAAGCTGTTTCTGATA   TTTTG T TAAAGGATGAACCTACTGGGATTTAAATGTCTAC GTTTGGACCGCCAAACTCGACTTATTACTTGG AAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTTGCAGGGGACAATCGTTTTCTTGTTCTAATTTAaaaaaaaaa                                                                                                                                                                                                                      ]
[+] EMBL CB097166             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACCGAACAATCGAAATATCTTGTTAAATATGCTATATTTGTGAAGAAAGACAATGCTGAATATGGAGTTCATGTTGTGCAGCAGATCCTTTGGGTAAATGGAATCAGATATGTCTTGCAGGAAATATATGGTATTGGGAACACAGCTGATAAGAATGCTCATGAGGATGATTCCGGGAAAGAATGTGTGGTTTGCCTTTCTGAACCAAGAGATACTGCTGTTCTTCCATG CAGGCATATGTGCCTGTG CAGGGAGTGTGCT CAAGTTTTAAAATATCAGACCAACAAATGCCCAATATGCAGGCAACCTGTTGAGGGCCTTCGCGAGATAGAGGTTGATAACAAACCGATCCCCCAACAAGGATCTCAGCAGTTAACAGCACCTCAATAAAGAGACATCTGATTGCAAGCAAACTGCCTGTACATATGTCATTTGTATATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAACAAAGCTGTTTCTGATA   TTTTG T TAAAGGATGAACCTACTGGGATTTAAATGTCTAC GTTTGGACCGCCAAACTCGACTTATTACTTGG AAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTTGCAGGGGACAATCGTTTTCTT                                                                                                                                                                                                                                          ]
[+] EMBL BI798658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccCAGCTGATAAGAATGCTCATGAGGATGATTCCGGGAAAGAATGTGTG  TTCCCTTTCTGAACCAAGAGATACT CTGTTCTTCCATG CAGGCATATGTGCCTGT  CAGGGAGTGTGCT CAAGTTTTAAAATATCAGACC AC AATGCCCAATAT CAGGCAACCT TTGAGGCCCTTCGCGAGATAGAGGTTGATAAC AACCGATCCCCCAACAAGGATCTCA CAGTTAACAGCACCTCAATAAAGTCTCATCTGATTGCAA C AACTACCTGTACATATGTCATGTGTATATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAAC AAGCTGTTTCTGATA   TTTTGCT TAAAGGATGAACCTACTGGGATTTAATTGTCTAC ATTTGGACCACC AACTCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAACCCTTTTGCAGGGGACAATCGTTTTCTTGTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAcaaaa                                                                                                                                                                                          ]
[+] EMBL BI798095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACTGCTGTTCTTCCATGCCAGGCATATGTGCCTGTGCCAGGGAGTGTGCTCCAAGTTTTAAAATATCAGACCTAC AATGCCCAATATGCAGGCAACCTGTTGA GGCCTTCGCGAGATAGAGGTTGATAAC AACCGATCCCCCAACAAGGATCTCAGCAGTTAACAGCACCTCAATAAAGTCTCATCTGATTGCAAGCAAACTACCTGTACATATGTCATGTGTATATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAACAAAGCTGTTTCTGATACTCTCTTG TCCCCAGGATGAACCTACTGGGATTTAATTGTCTACACTTTGGACCACC AACTCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAACCCTTTTGCAGGGGACAATCGTTTTCTTGTTCTAATTTAGTTACTCCTCCATCACTTTCATGTGTTTAAGACCAaaa                                                                                                                                                                                         ]
[+] EMBL BM421233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAACAAAGCTGTTTCTGATA   TTTTG T TAAAGGATGAACCTACTGGGATTTAAATGTCTAC GTTTGGACCGCCAAACTCGACTTATTACTTGG AAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTTGCAGGGGACAATCGTTTTCTTGTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAGCATGCGATGTGTTCTTTCTAGTGGATGCCCTTATTGTTCTGTGATGTCACCAATTGGAAGTTTTTCCTCCTACTGGCATGTCCCTGGGAAGACAAGCCAGGCAACATTTTGGTGCTACTTTTACCATGCTTTAGATCTTACTATTACAAGATTATGTAGATCGACNATCCTTTTTGGGTTAAAAAAAAAA]


>consensus_12139#0 ACCCAGACTTCCAGACTCAAGAGGCGAGGGCTTCCCAATGGGCAACATCGCGAGCAGCGG CGGCGCTAGCCCACGTCCGCCGCCGCCGCATCTCGAAGCCTATAGACACGGGGTGCCGCC CCCGTACTACCACAGCTACCCTCGTCCGCCCCCCGGCGCCGCCGCGCCGCCGCCGGTGCC GGTGCCTGCGCACGTGGAGCGGCACAGGGCCGTGGCGGTCAACGTCGGCGTCAACGTCAA GGGGGACACCCTGCGGCTGGTGCCCGACGACGACGACGACGATGGCCGCAGCCTACTCCT CGCCTTCTCCTTCGACGCCGATGGCCCCGGAAGCATAACTGTCTGCTTCTTTGCACAAGA AGATAAGTGTGCCTTGAAGACCGCAAAGGAAAATTTGCTTCAACCTGTGACCGTGCCTTT TAAGGAAGGTCGAGGTCAGGAGTTCAAGCAACCAAGTGGGTCGGGAATCGATGTCTCTCG TTTTGAGGAATCTGAGCTAACTAATGTTGGGGAAGGTGGTGTATTCCCTGTAGCATTCAA AGTACAAATGGATGTGTCAGGCAACCAAGAATCAGAAGGGGCACATGAGACCGAACAATC GAAATATCTTGTTAAATATGCTATATTTGTGAAGAAAGACAATGCTGAATATGGAGTTCA TGTTGTGCAGCAGATCCTTTGGGTAAATGGAATCAGATATGTCTTGCAGGAAATATATGG TATTGGGAACACAGCTGATAAGAATGCTCATGAGGATGATTCCGGGAAAGAATGTGTGGT TTGCCTTTCTGAACCAAGAGATACTGCTGTTCTTCCATGCAGGCATATGTGCCTGTGCAG GGAGTGTGCTCAAGTTTTAAAATATCAGACCAACAAATGCCCAATATGCAGGCAACCTGT TGAGGGCCTTCGCGAGATAGAGGTTGATAACAAACCGATCCCCCAACAAGGATCTCAGCA GTTAACAGCACCTCAATAAAGTCTCATCTGATTGCAAGCAAACTACCTGTACATATGTCA TGTGTATATAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAAC AAAGCTGTTTCTGATATTTTGTTAAAGGATGAACCTACTGGGATTTAATTGTCTACGTTT GGACCACCAAACTCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAAG CCTTTTGCAGGGGACAATCGTTTTCTTGTTCTAATTTAGTTACTCATCCATCACTTTGAT GTGTTTAAGAGCATACGATGTGTTCTTTCTAGTGGATGCCCTTATTGTTCTGTGATGTCA CCAATTGGAAGTTTTTCCTCCTACTGGCATGTCCCTGGGAAGACAAGCCAGGCAACATTT TGGTGCTACTTTTACCATGCTTTAGATCTTACTATTACAAGATTATGTAGATCGACNATC CTTTTTGGGTTAAAAAAAAAA



consensusID : consensus_12139#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 354
fasta sequence
                              [CGAGATAGAGGTTGATAACAAACCGATTCCCCAACAAGGATCTCAGCAGTTAACAGCCCCTCAATAAAGTCTCATCTGATTGCAAGCAAACTNCCTNTACATGTGTCATGTGTATNTAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTNCCTGGTAGCAACAAAGCTGTTTCTGATATTTTNTTAAAGGATGAACCTACTGGGATTTAATTGTCTACGTTTGGACCNCCAAACTCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU068080             [CGAGATAGAGGTTGATAACAAACCGATTCCCCAACAAGGATCTCAGCAGTTAACAGCCCCTCAATAAAGTCTCATCTGATTGCAAGCAAACTNCCTNTACATGTGTCATGTGTATNTAAAAGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTNCCTGGTAGCAACAAAGCTGTTTCTGATATTTTNTTAAAGGATGAACCTACTGGGATTTAATTGTCTACGTTTGGACCNCCAAACTCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12139#1 CGAGATAGAGGTTGATAACAAACCGATTCCCCAACAAGGATCTCAGCAGTTAACAGCCCC TCAATAAAGTCTCATCTGATTGCAAGCAAACTNCCTNTACATGTGTCATGTGTATNTAAA AGGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTNCCTGGTAGCAACAAAGCTGTTTCT GATATTTTNTTAAAGGATGAACCTACTGGGATTTAATTGTCTACGTTTGGACCNCCAAAC TCGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAAGCCAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12139#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 290
fasta sequence
                              [TGACAATTATGTCTATGTGTGTATGATGAGANATAGGTCTGTGGCTGTTCGGGAAGGGGAAATGCGGAAGTTNTACCTGGTAGCAAACAAAGCTGTTTCTGATATTTGTGTTATAAGGATGAACCTACTGGGATTNTAAATGTCTACAGTTTGGACCGCCAAACTCGACTTGATTGACTTGGAAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTNGCAGGGGACAATCGNNTTCNNGTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAGCAAAAA]

[+] EMBL BQ907566             [TGACAATTATGTCTATGTGTGTATGATGAGANATAGGTCTGTGGCTGTTCGGGAAGGGGAAATGCGGAAGTTNTACCTGGTAGCAAACAAAGCTGTTTCTGATATTTGTGTTATAAGGATGAACCTACTGGGATTNTAAATGTCTACAGTTTGGACCGCCAAACTCGACTTGATTGACTTGGAAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTNGCAGGGGACAATCGNNTTCNNGTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAGCAAAAA]


>consensus_12139#2 TGACAATTATGTCTATGTGTGTATGATGAGANATAGGTCTGTGGCTGTTCGGGAAGGGGA AATGCGGAAGTTNTACCTGGTAGCAAACAAAGCTGTTTCTGATATTTGTGTTATAAGGAT GAACCTACTGGGATTNTAAATGTCTACAGTTTGGACCGCCAAACTCGACTTGATTGACTT GGAAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTNGCAGGGGACAATCGNNTTCNN GTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAGCAAAAA



consensusID : consensus_12139#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 246
fasta sequence
                              [CGCGAGCAGCGCGGCNCTACCAACGTCCNCCGCGCNGCANTCTCGAAGCCTATAGACACGGGGTGCCGCCCCCGTACTACCACAGCTACCCTCGTCCGCCCCCCGGCCCGCCNCCACGACCGGTGCCGGTGCCTGCGCACGTGGAGCNGCACAGGGCCTNGGCGGTCAGGTCGGCGTCAACGTCAAGGGGGACACCCTGCGGCTGGTGCCGACGACGACGACGACGATGGCCNCAGCTTACTCCTC]

[+] EMBL C26134               [CGCGAGCAGCGCGGCNCTACCAACGTCCNCCGCGCNGCANTCTCGAAGCCTATAGACACGGGGTGCCGCCCCCGTACTACCACAGCTACCCTCGTCCGCCCCCCGGCCCGCCNCCACGACCGGTGCCGGTGCCTGCGCACGTGGAGCNGCACAGGGCCTNGGCGGTCAGGTCGGCGTCAACGTCAAGGGGGACACCCTGCGGCTGGTGCCGACGACGACGACGACGATGGCCNCAGCTTACTCCTC]


>consensus_12139#3 CGCGAGCAGCGCGGCNCTACCAACGTCCNCCGCGCNGCANTCTCGAAGCCTATAGACACG GGGTGCCGCCCCCGTACTACCACAGCTACCCTCGTCCGCCCCCCGGCCCGCCNCCACGAC CGGTGCCGGTGCCTGCGCACGTGGAGCNGCACAGGGCCTNGGCGGTCAGGTCGGCGTCAA CGTCAAGGGGGACACCCTGCGGCTGGTGCCGACGACGACGACGACGATGGCCNCAGCTTA CTCCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12139#0      ------------------------------------ACCCAGACTTCCAGACTCAAGAGG 24
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      CGAGATAGAGGTTGATAACAAACCGATTCCCCAACAAGGATCTCAGCAGTTAACAGCCCC 60
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      CGAGGGCTTCCCAATGGGCAACATCGCGAGCAGCGGCGGCGCTAGCCC---ACGTCCGCC 81
consensus_12139#3      ------------------------CGCGAGCAGCG-CGGCNCTA-CCA---ACGTCCNCC 31
consensus_12139#1      TCAATAAAGTCTCATCTGATTGCAAGCAAACTNCCTNTACATGTGTCATGTGTATNTAAA 120
consensus_12139#2      ------------------------TGACAATTATGTCTATGTGTGT-ATG-ATGAGANAT 34
                                                *  *                               

consensus_12139#0      GCCGCCGCAT-C--TCGAAGCCTATAGACACGGGGTGCCGCCCCCGTACTAC-CACAGCT 137
consensus_12139#3      GC-GCNGCANTC--TCGAAGCCTATAGACACGGGGTGCCGCCCCCGTACTAC-CACAGCT 87
consensus_12139#1      AGGTCTGTGCTT--TCGGGAAGGGGAAAT-CGGAAGTTN--CCTGGTAGCAA-CAAAGCT 174
consensus_12139#2      AGGTCTGTGGCTGTTCGGGAAGGGGAAATGCGGAAGTTNTACCTGGTAGCAAACAAAGCT 94
                           * *       ***        * *  ***        **  ***  *  ** ****

consensus_12139#0      ACCCTCG---TCCGCCCCCCGGCGCCGCCGCGCCGCCGCCGGTGCCGGTGCCTGC-GCAC 193
consensus_12139#3      ACCCTCG---TCCGCCCCCCGGC-CCGCCNC--CACGACCGGTGCCGGTGCCTGC-GCAC 140
consensus_12139#1      GTTTCTGATATTT-TNTTA-AAGGATGAACC--TACTGGGATTT-AATTGTCTAC-GTTT 228
consensus_12139#2      GTTTCTGATATTTGTGTTATAAGGATGAACC--TACTGGGATTNTAAATGTCTACAGTTT 152
                             *   *               *   *    *      *     ** ** * *   

consensus_12139#0      GTGGAGCGGCACAGGGCCGTGGCGGTCAACGTCGGCGTCAACGTCAAGGGGGACACCCTG 253
consensus_12139#3      GTGGAGCNGCACAGGGCCTNGGCGGTCAG-GTCGGCGTCAACGTCAAGGGGGACACCCTG 199
consensus_12139#1      GGACCNCCAAACTCGACTT-ATTACTTGGAAAAGACA-CTATTTTAGATTGTATGGTTCA 286
consensus_12139#2      GGACCGCCAAACTCGACTTGATTGACTTGGAAAGACA-CTATTTTAGATTGTATGGTTCA 211
                       *     *   **  * *                * *  * *  * *    * *       

consensus_12139#0      CGGCTGGTGCCCGACGACGACGACGACGATGGCCGCAGCCTACTCCTCGCCTTCTCCTTC 313
consensus_12139#3      CGGCTGGTGCC-GACGACGACGACGACGATGGCCNCAGCTTACTCCTC------------ 246
consensus_12139#1      AGCCAAAAAAA-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 334
consensus_12139#2      AGCCTTTNGCA-GGGGACAATCGNNTTCNNGTTCTAATTTAGTTACTCATCCATCACTTT 270
                        * *            *  *                *                       

consensus_12139#0      GACGCCGATGGCCCCGGAAGCATAACTGTCTGCTTCTTTGCACAAGAAGATAAGTGTGCC 373
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      AAAAAAAAAAAAAAAAAAAA---------------------------------------- 354
consensus_12139#2      GATGTGTTTAAGAGCAAAAA---------------------------------------- 290
                                                                                   

consensus_12139#0      TTGAAGACCGCAAAGGAAAATTTGCTTCAACCTGTGACCGTGCCTTTTAAGGAAGGTCGA 433
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      GGTCAGGAGTTCAAGCAACCAAGTGGGTCGGGAATCGATGTCTCTCGTTTTGAGGAATCT 493
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      GAGCTAACTAATGTTGGGGAAGGTGGTGTATTCCCTGTAGCATTCAAAGTACAAATGGAT 553
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      GTGTCAGGCAACCAAGAATCAGAAGGGGCACATGAGACCGAACAATCGAAATATCTTGTT 613
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      AAATATGCTATATTTGTGAAGAAAGACAATGCTGAATATGGAGTTCATGTTGTGCAGCAG 673
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      ATCCTTTGGGTAAATGGAATCAGATATGTCTTGCAGGAAATATATGGTATTGGGAACACA 733
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      GCTGATAAGAATGCTCATGAGGATGATTCCGGGAAAGAATGTGTGGTTTGCCTTTCTGAA 793
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      CCAAGAGATACTGCTGTTCTTCCATGCAGGCATATGTGCCTGTGCAGGGAGTGTGCTCAA 853
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      GTTTTAAAATATCAGACCAACAAATGCCCAATATGCAGGCAACCTGTTGAGGGCCTTCGC 913
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      GAGATAGAGGTTGATAACAAACCGATCCCCCAACAAGGATCTCAGCAGTTAACAGCACCT 973
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      CAATAAAGTCTCATCTGATTGCAAGCAAACTACCTGTACATATGTCATGTGTATATAAAA 1033
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      GGTCTGTGCTTTCGGGAAGGGGAAATCGGAAGTTACCTGGTAGCAACAAAGCTGTTTCTG 1093
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      ATATTTTGTTAAAGGATGAACCTACTGGGATTTAATTGTCTACGTTTGGACCACCAAACT 1153
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      CGACTTATTACTTGGAAAAGACACTATTTTAGATTGTATGGTTCAAGCCTTTTGCAGGGG 1213
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      ACAATCGTTTTCTTGTTCTAATTTAGTTACTCATCCATCACTTTGATGTGTTTAAGAGCA 1273
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      TACGATGTGTTCTTTCTAGTGGATGCCCTTATTGTTCTGTGATGTCACCAATTGGAAGTT 1333
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      TTTCCTCCTACTGGCATGTCCCTGGGAAGACAAGCCAGGCAACATTTTGGTGCTACTTTT 1393
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      ACCATGCTTTAGATCTTACTATTACAAGATTATGTAGATCGACNATCCTTTTTGGGTTAA 1453
consensus_12139#3      ------------------------------------------------------------
consensus_12139#1      ------------------------------------------------------------
consensus_12139#2      ------------------------------------------------------------
                                                                                   

consensus_12139#0      AAAAAAAA 1461
consensus_12139#3      --------
consensus_12139#1      --------
consensus_12139#2      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)