cluster # 12146

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12146 cluster # 12146 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12146#0 length = 2108 sequences # 9

consensus_12146#1 length = 619 sequences # 1

consensusID : consensus_12146#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2108
fasta sequence

                              [GGGCAACTGGGGCGACGATGCTGACCGTGGCGGCTTCCGCACTCGGCAACAACAAAAAATCCACCGCCGCGGCCTGCTTCTCCCTTGCTATGCCCTTCCTCCTCTCCTCCCCCACCCCTCCTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGCTCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGGCCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACCTCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCGTCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACAAGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATGGTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAAAACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCCCTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTGATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG-CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAATGGCATAGTCTGCT]

[+] EMBL AK066800             [GGGCAACTGGGGCGACGATGCTGACCGTGGCGGCTTCCGCACTCGGCAACAACAAAAAATCCACCGCCGCGGCCTGCTTCTCCCTTGCTATGCCCTTCCTCCTCTCCTCCCCCACCCCTCCTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGCTCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGGCCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACCTCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCGTCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACAAGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATGGTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAAAACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCCCTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTGATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAG                                            ]
[+] EMBL AK099380             [                                                                                                   TCCTCTCCTCCCCCACCCCTCCTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGCTCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGGCCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACCTCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCGTCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACAAGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATGGTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAAAACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCCCTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTGATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCGCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGT                          ]
[+] EMBL AK104008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAAGACCACCATTTGATGATCTTATCAACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTGTTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAACCTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCACACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACCTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGT                          ]
[+] EMBL CB646829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGCTTCATCTTCCTCCATATCCCGGCACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCCTCAAGAATGGTTCTTTTAAAGGGTGTTGATAAGCACGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTACAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCATCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACCGATTAACACCCAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA759153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTCGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAGATGCCATTAAATCTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACGTCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAAaaaaaaa       ]
[-] EMBL CB655997             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCA               ]
[-] EMBL CB646830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCCAGAAGAAGAATCTGAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATGGCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAATGGCATTGTCTGCT]
[+] EMBL BI804435             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAA GCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAGTAGATAGGA CACAGTATGCCACATCGAGAGGTTGT CCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGT CCATGATTA GTCGCGTGTTTGAGACTGTGAGTCCCTGAAGCTCTGCTTTTCGACATGCCCTTCACACATCTGATGTTCTCTGAAGCCACAGAGTGGATGAATCCATGAA GCCCTTCTCTTGGTCATAAGATTTTTCTGTAAAT CC TTAAA TTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATC CAGCCTGGA AAGACTGTTGGACATA GTCGACGTCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATAAAAa                                    ]
[-] EMBL CB638966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTCAGTATTCACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAG CACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCCATTAAATTTTACCCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAATGGCAT        ]




>consensus_12146#0
GGGCAACTGGGGCGACGATGCTGACCGTGGCGGCTTCCGCACTCGGCAACAACAAAAAAT
CCACCGCCGCGGCCTGCTTCTCCCTTGCTATGCCCTTCCTCCTCTCCTCCCCCACCCCTC
CTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGC
TCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGG
CCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACC
TCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCG
TCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACA
AGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATG
GTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAA
AACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCC
CTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTG
ATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCA
ACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTG
TTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAAC
CTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCAC
ACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATC
TTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACA
TTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTG
ATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAAC
CAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTC
TTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTATACAAATTATGGTAGCCAGAAGG
CACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACC
GGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCTGAGAAGTATT
TCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAGAGCACTATCA
TTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGGAACAAAAGTATTCTGATG
GCAGCGTGATCCCAAAACCTGATTACTGGGGTGGGTACAGATTAACACCAAAACTTTTTG
AGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATTCACTGCGAGAAG
TAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAGTAACCCCATCCC
AGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAATCTTATCCCAGCT
GCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGCGTGTTTGAGACT
GTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGATGTTCTCTGAAGC
ACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTTTCTGTAAATGCC
ATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATTATCTCAGCCTGG
AGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAATGTTCTGGGAGG
AAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTGCTGCAATGGCAT
AGTCTGCT

consensusID : consensus_12146#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence

                              [TTTGTNCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAANCTGTTNCTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCNAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTAAATACAAGTNTACAAATTATGGTNGCCNNAANGCNCNTGATTTATCTGANAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGANTANAAAGTTCTGTTCANAAAGTTCCANAANAANAATCTGANAAGTATTTCCACAGCCGCCCACNAAGGAGTCNACTTGGTGCAATANTCNGCAACANANCACTATCATTCCTGGAANGGAAGTTCTTCCCANGCGTTCNAGGAATTGGGAACAAAAGTTTTCCTGAAGGGTGAGTTTGACATGCCANTTATTTCCCT]

[+] EMBL BE229716             [TTTGTNCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTTAGATGGTTTGATGAANCTGTTNCTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCNAGAATGGTTCTTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTAAATACAAGTNTACAAATTATGGTNGCCNNAANGCNCNTGATTTATCTGANAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAGANTANAAAGTTCTGTTCANAAAGTTCCANAANAANAATCTGANAAGTATTTCCACAGCCGCCCACNAAGGAGTCNACTTGGTGCAATANTCNGCAACANANCACTATCATTCCTGGAANGGAAGTTCTTCCCANGCGTTCNAGGAATTGGGAACAAAAGTTTTCCTGAAGGGTGAGTTTGACATGCCANTTATTTCCCT]




>consensus_12146#1
TTTGTNCCCCCACCTATTGTGAGCAAATATAAGCTTCATCTTCCTCCATATCCCGGTACC
TCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACATTTCATCTCTAAGAGAAAAT
TACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTGATCCATTTGATCAGTTCGTT
AGATGGTTTGATGAANCTGTTNCTGCTGGTCTACGTGAACCAAATGCTATGGCTTTAACA
ACTGCCGATAAGGAGGGAAAACCTTCGTCNAGAATGGTTCTTTTAAAGGGTGTTGATAAG
CAGGGATTTGTTTGGTAAATACAAGTNTACAAATTATGGTNGCCNNAANGCNCNTGATTT
ATCTGANAATCCAAATGCCGCTCTGCTTTTCTACTGGAATGAGATGAACCGGCAGGTAAG
ANTANAAAGTTCTGTTCANAAAGTTCCANAANAANAATCTGANAAGTATTTCCACAGCCG
CCCACNAAGGAGTCNACTTGGTGCAATANTCNGCAACANANCACTATCATTCCTGGAANG
GAAGTTCTTCCCANGCGTTCNAGGAATTGGGAACAAAAGTTTTCCTGAAGGGTGAGTTTG
ACATGCCANTTATTTCCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12146#0      GGGCAACTGGGGCGACGATGCTGACCGTGGCGGCTTCCGCACTCGGCAACAACAAAAAAT 60
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CCACCGCCGCGGCCTGCTTCTCCCTTGCTATGCCCTTCCTCCTCTCCTCCCCCACCCCTC 120
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CTCCCCCACCTCACTCCTCCTCTCTCCCCCGGAGCCCTAGCCCTCGCCCTCGCCTCCCGC 180
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      TCCCGCCACCCCGCCGCGCCGCCCTCGTCACCGCCGCGCAGGACCCTCGGTGGCGGCGGG 240
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CCATGGCGTCGCTGGCCGTCTCGGCGTCCGCGTCGGCGTCGGGGGAGGAGGTGACGCACC 300
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      TCGCGCAGCGGGAGGCGGCGGAGATCGACGAGCAGCTCATGGGCCCGCTCGGCTTCAGCG 360
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      TCGACCAGCTCATGGAGCTTGCGGGGCTTAGCGTTGCGGCGGCGGTTGCGGAGGTTTACA 420
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      AGTTGGGTGAACATACAAGGGTGCTAGTAATCTGTGGTCCAGGAAATAATGGTGGTGATG 480
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      GTCTGGTAGCTGCTCGTCATCTTCATCACTTTGGGTACAAGCCTTCTGTATGTTATCCAA 540
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      AACGCACGCCCAAGCCTCTGTATTCTGGCCTTTGTACTCAGCTTGAATCACTAACAATCC 600
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CTTTCGTTCCTGTTGAAGACCTACCTGCAAATTTATCGGAGGAGTTTGACATCATTATTG 660
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      ATGCAATGTTTGGTTTTTCGTTTCATGGAACACCAAGACCACCATTTGATGATCTTATCA 720
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      ACAGGCTTGTTTCACTGAGTGCTATTGATAATTCTGCTAAAAGACCAGCAATTGTTTCTG 780
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      TTGATATCCCTTCGGGGTGGCACGTTGAAGAGGGAGATATCAATGGAGGAGGGTTTAAAC 840
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CTGATATGCTGGTATCATTGACTGCACCAAAGCTCTGTGCAAAAAAATTTACCGGTCCAC 900
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      ACCATTTTCTTGGGGGTAGATTTGTTCCCCCACCTATTGTGAGCAAATATAAGCTTCATC 960
consensus_12146#1      --------------------TTTGTNCCCCCACCTATTGTGAGCAAATATAAGCTTCATC 40
                                           ***** **********************************

consensus_12146#0      TTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACA 1020
consensus_12146#1      TTCCTCCATATCCCGGTACCTCAATGTGTGTGAGAATTGGAAAAGCTCCATCTGTTGACA 100
                       ************************************************************

consensus_12146#0      TTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTG 1080
consensus_12146#1      TTTCATCTCTAAGAGAAAATTACATCTCCCCTGAACTTCTCGAGAATCAGGTGATGCCTG 160
                       ************************************************************

consensus_12146#0      ATCCATTTGATCAGTTCGTTAGATGGTTTGATGAAGCTGTTACTGCTGGTCTACGTGAAC 1140
consensus_12146#1      ATCCATTTGATCAGTTCGTTAGATGGTTTGATGAANCTGTTNCTGCTGGTCTACGTGAAC 220
                       *********************************** ***** ******************

consensus_12146#0      CAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCAAGAATGGTTC 1200
consensus_12146#1      CAAATGCTATGGCTTTAACAACTGCCGATAAGGAGGGAAAACCTTCGTCNAGAATGGTTC 280
                       ************************************************* **********

consensus_12146#0      TTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTA----------TACAAATTATGGT 1250
consensus_12146#1      TTTTAAAGGGTGTTGATAAGCAGGGATTTGTTTGGTAAATACAAGTNTACAAATTATGGT 340
                       *************************************          *************

consensus_12146#0      AGCCAGAAGGCACATGATTTATCTGAGAATCCAAATGCCGCTCTGCTTTTCTACTGGAAT 1310
consensus_12146#1      NGCCNNAANGCNCNTGATTTATCTGANAATCCAAATGCCGCTCTGCTTTTCTACTGGAAT 400
                        ***  ** ** * ************ *********************************

consensus_12146#0      GAGATGAACCGGCAGGTAAGAGTAGAAGGTTCTGTTCAGAAGGTTCCAGAAGAAGAATCT 1370
consensus_12146#1      GAGATGAACCGGCAGGTAAGANTANAAAGTTCTGTTCANAAAGTTCCANAANAANAATCT 460
                       ********************* ** ** ********** ** ****** ** ** *****

consensus_12146#0      GAGAAGTATTTCCACAGCCGCCCACGAGGGAGTCAACTTGGTGCAATAGTCAGCAAGCAG 1430
consensus_12146#1      GANAAGTATTTCCACAGCCGCCCACNAAGGAGTCNACTTGGTGCAATANTCNGCAA-CAN 519
                       ** ********************** * ****** ************* ** **** ** 

consensus_12146#0      AGCACTATCATTCCTGGAAGGGAAGTTCTTCAGCAGGCGTACAAGGAATTGG-AACAAAA 1489
consensus_12146#1      ANCACTATCATTCCTGGAANGGAAGTTCTTCC-CANGCGTTCNAGGAATTGGGAACAAAA 578
                       * ***************** ***********  ** **** * ********* *******

consensus_12146#0      GTATTCTGATGGCAGCGTGATCCCAAAAC-CTGATTACTGGGGTGGGTACAGATTAACAC 1548
consensus_12146#1      GTTTTC---CTGAAGGGTGAGTTTGACATGCCANTTATTTCCCT---------------- 619
                       ** ***     * ** ****     * *  *   *** *    *                

consensus_12146#0      CAAAACTTTTTGAGTTCTGGCAAGGCCAACAGTCTCGACTGCATGACCGGCTTCAGTATT 1608
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CACTGCGAGAAGTAGATAGGAGCACAGTATGGCACATCGAGAGGTTGTCCCCTTGACTAG 1668
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      TAACCCCATCCCAGCTCTTTGGTAATAAAAAGGATCTCATCTTATTATCAAGAATCAAAT 1728
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CTTATCCCAGCTGCAAGGAGTCCCAATTGCTCGATGATGTTAGTGCCATGATTAGGTCGC 1788
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      GTGTTTGAGACTGTGAGTGCCTGAAGCTCTGCTTTTTGACATGCCCTTCACACATCTGAT 1848
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      GTTCTCTGAAGCACAGAGTGGATGAATCCATGAAGGCCCTTCTCTTGGTCATAAGATTTT 1908
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      TCTGTAAATGCCATTAAATTTTAACCGTCCTGTAGAAAGAATTATGATGAGAATCTCATT 1968
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      ATCTCAGCCTGGAGAAGACTGTTGGACATAGGTCGACATCGTAGTATATCGAAGAAATAA 2028
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      TGTTCTGGGAGGAAATAAGTATTTATCAGCATCAAGCATATAAGTCAATAAAGTTGTGTG 2088
consensus_12146#1      ------------------------------------------------------------
                                                                                   

consensus_12146#0      CTGCAATGGCATAGTCTGCT 2108
consensus_12146#1      --------------------