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Oryza sativa
cluster # 12153 cluster # 12153       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12153#0 length = 833 sequences # 6  
consensus_12153#1 length = 672 sequences # 1  
consensus_12153#2 length = 523 sequences # 2  
consensus_12153#3 length = 442 sequences # 1  

consensusID : consensus_12153#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 833
fasta sequence
                              [AAATGGTGGTCGTGGTGAAAAGAGGCAACATGTACGAAGGCAGTTACGCATCCAGCTCGCGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACATCGATGGCATGGACGCAGTGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTCATTAGCCCAGGACTTTTCACCCAGCCAATCACAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGA-ACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCAGAAGTCCCAGAGGTGACTGGTCTCTGCGACTACTGTATGTTGAAATGCTTTTTTCGACGGATGCAGCTGCATTTGTAATAACACCCCATCTTTATTCGGTCGGTACTCTTCCTGCATAACTGAATAAAAAAGCCTGTTACTAGCAGGGTTTACATTACTGTCAGTAGCCGCGCGGTTACTGGCTTTACCGTGGGGGTACGGTAATAGAAAAACCACGGTTACCTCTTTAAAAAAAAAAGA]

[+] EMBL CB619130             [AAATGGTGGTCGTGGTGAAAAGAGGCAACATGTACGAAGGCAGTTACGCATCCAGCTCGCGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACATCGATGGCATGGACGCAGTGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTCATTAGCCCAGGACTTTTCACCCAGCCAATCACAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGA ACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCAGAAGTCCCAGAGGTGACTGGTCTCTGCGACTACTGTATGTTGAAATGCTTTTTTCGACGGATGCAGCTGCATTTGTAATAACACCCCATCTTTATTCGGTCGGTACTCTTCCTGCATAACTGAATAAAAAAGCCTGTTACTAGCAGGGTTTACATTACTGTCAGTAGCCGCGCGGGTACTGGCTT                                                       ]
[+] EMBL CB619090             [AAATGGTGGTCGTGGTGAAAAGAGGCAACATGTACGAAAGCAGTTACGCATCCAGCTCGCGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACATCGATGGCATGGACGCAGTGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGAGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTCATTAGCCCAGGACTTTTCACCCAGCCAATCACAATGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATACCATAAAGCGTTGTCATCGACGA ACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCATAAGTCCCATAGGTGACTGGTCTCTGCGACTACTGTATGATGAAATGCTTTTTTCGACGGATGCAGCTGCATTTGTAATAACACCCCATCTTTATTCGGTCGGTACTCTTCCTGCATAACTGAATAAAAAAGCCTGTTACTAGCAGGGTTT                                                                                         ]
[+] EMBL CB619088             [                       GGGAANATGTAGGAAGGCAGTTACTCATCCAGCTCGCGCCCGTTGGGAGTTCTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACATCGATGGCATGGACGCAGTGCACCACCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTCATTAGCCCAGGACTTTTCACCCAGCCAATCACAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACTATATTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCG                                                                                                                                                                                                                                                      ]
[-] EMBL CB619089             [                                                                             TCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACATCGATGGCATGGACGCAGTGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTCATTAGCCCAGGACTTTTCACCCAGCCAATCACAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGA ACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCAGAAGTCCCAGAGGTGACTGGTCTCTGCGACTACTGTATGTTGAAATGCTTTTTTCGACGGATGCAGCTGCATTTGTAATAACACCCCATCTTTATTCGGTCGGTACTCTTCCTGCATAACTGAATAAAAAAGCCTGTTACTAGCAGGGTTTACATTACTGTCAGTAGCCGCGCGGTTACTGGCTTTACCGTGGGGGTACGGTAATAGAAAAACCACGGTTACCTCTTTAAAAAAAAAAGA]
[-] EMBL CB619091             [                                                                                                                       ATTGATGGCATGGACGCAGTGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCCGTCATTAGCCCAGGACTTTTCACCCAGCCAATCACAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGA ACTGTAGTGATTTTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATACCGGCCAAGTGGCCATGGTCCTATCTTGTTTTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCAGAAGTCCCAGAGGTGACTGGTTTATGCGACTACTGTATGTTGAAATGCTTTTTTTGACGGATGCAGCTGCATTTGTAATAACACCCCATCTTTATTTGGTCGGTACTCTTCCTGCATATCTGAATAAAAAAGCCTGTTACTAGCAGGGTTTACATTTCTGTCAGTAGCCGCGCGGTTACTGGCTTTACCGTGGAAGGACGGTAATAGA                                ]
[-] EMBL CB619131             [                                                                                                                           ATGGCATGGACGCAGTGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTCATTAGCCCAGGACTTTTCACCCAGCCAATCACAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGA ACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCAGAAGTCCCAGAGGTGACTGGTCTCTGCGACTACTGTATGTTGAAATGCTTTTTTCGACGGATGCAGCTGCATTTGTAATAACACCCCATCTTTATTCGGTCGGTACTCTTCCTGCATAACTGAATAAAAAAGCCTGTTACTAGCAGGGTTTACATTACTGTCAGTAGCCGCGCGGTTACTGGCTTTACCGTGGGGGTACGGTAATAGAAAAACCACGGTT CCT                ]


>consensus_12153#0 AAATGGTGGTCGTGGTGAAAAGAGGCAACATGTACGAAGGCAGTTACGCATCCAGCTCGC GCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACA TCGATGGCATGGACGCAGTGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGCT GAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTCATTAGCCCAGGACTTTTCACC CAGCCAATCACAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATA AAGCGTTGTCATCGACGAACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGT ACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCAC AGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGC ATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCG TCCTTCTCCGGGGGACCAAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCAGAAGTCC CAGAGGTGACTGGTCTCTGCGACTACTGTATGTTGAAATGCTTTTTTCGACGGATGCAGC TGCATTTGTAATAACACCCCATCTTTATTCGGTCGGTACTCTTCCTGCATAACTGAATAA AAAAGCCTGTTACTAGCAGGGTTTACATTACTGTCAGTAGCCGCGCGGTTACTGGCTTTA CCGTGGGGGTACGGTAATAGAAAAACCACGGTTACCTCTTTAAAAAAAAAAGA



consensusID : consensus_12153#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence
                              [CACTCGCGTCTTCAAGGGATCCCGTAGAGTCCAATGCGCTCGAGGCCCTGGGGAAAGCCCCCGGGGGTATTGTTCCCCCGCACGCCTTGGACCAAGATCGATGCGCCTCTTCCCTCAAGGCCGAGAGGCCCCCCCCATATGTGTTCCTATGTGCACCTCCGTTGAGCAGGTGATAGATTTCCTCCTCACAGAAAAATTTGAAATGGTGGTCGTGGTGAAAAAAGGCAACATGTTCCAAGGCAGTTACGCATTCAGCTCGCGCCCGTTGGGAGTTTTTTCCCTCGCCATCTTGTGGAAGTTCACCGCTGACGCGCCCTACATCGATGGCATGGACGCAGCGCCCCAGCTTCAGCAGGATGTGGAAGCCAGCCATTGTGGCTGAGTGCCTTGCTAGTTTTTTCTGTGACTCCACATCTGTGATTGGCTGGGTGAAAAATCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCCTTGGGCCATAGCATAAAGCGTTGTTATCGACGAACTGTAGTGATTCTGTCCCCCCTGTCAAATGTAATTTGATGTACTACACATCAAAATGGGGTACTACCGTGTGTTGGGATTGTGGATTGTTAACCAATGGCCCAGCTAGTTTGGGAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA762660             [CACTCGCGTCTTCAAGGGATCCCGTAGAGTCCAATGCGCTCGAGGCCCTGGGGAAAGCCCCCGGGGGTATTGTTCCCCCGCACGCCTTGGACCAAGATCGATGCGCCTCTTCCCTCAAGGCCGAGAGGCCCCCCCCATATGTGTTCCTATGTGCACCTCCGTTGAGCAGGTGATAGATTTCCTCCTCACAGAAAAATTTGAAATGGTGGTCGTGGTGAAAAAAGGCAACATGTTCCAAGGCAGTTACGCATTCAGCTCGCGCCCGTTGGGAGTTTTTTCCCTCGCCATCTTGTGGAAGTTCACCGCTGACGCGCCCTACATCGATGGCATGGACGCAGCGCCCCAGCTTCAGCAGGATGTGGAAGCCAGCCATTGTGGCTGAGTGCCTTGCTAGTTTTTTCTGTGACTCCACATCTGTGATTGGCTGGGTGAAAAATCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCAGTGAATTGGTTTTGCTCTGCCCATATGTGTCCCTTGGGCCATAGCATAAAGCGTTGTTATCGACGAACTGTAGTGATTCTGTCCCCCCTGTCAAATGTAATTTGATGTACTACACATCAAAATGGGGTACTACCGTGTGTTGGGATTGTGGATTGTTAACCAATGGCCCAGCTAGTTTGGGAAAAAAAAAAAAAAAAAAAAA]


>consensus_12153#1 CACTCGCGTCTTCAAGGGATCCCGTAGAGTCCAATGCGCTCGAGGCCCTGGGGAAAGCCC CCGGGGGTATTGTTCCCCCGCACGCCTTGGACCAAGATCGATGCGCCTCTTCCCTCAAGG CCGAGAGGCCCCCCCCATATGTGTTCCTATGTGCACCTCCGTTGAGCAGGTGATAGATTT CCTCCTCACAGAAAAATTTGAAATGGTGGTCGTGGTGAAAAAAGGCAACATGTTCCAAGG CAGTTACGCATTCAGCTCGCGCCCGTTGGGAGTTTTTTCCCTCGCCATCTTGTGGAAGTT CACCGCTGACGCGCCCTACATCGATGGCATGGACGCAGCGCCCCAGCTTCAGCAGGATGT GGAAGCCAGCCATTGTGGCTGAGTGCCTTGCTAGTTTTTTCTGTGACTCCACATCTGTGA TTGGCTGGGTGAAAAATCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCAGTGAATTGGT TTTGCTCTGCCCATATGTGTCCCTTGGGCCATAGCATAAAGCGTTGTTATCGACGAACTG TAGTGATTCTGTCCCCCCTGTCAAATGTAATTTGATGTACTACACATCAAAATGGGGTAC TACCGTGTGTTGGGATTGTGGATTGTTAACCAATGGCCCAGCTAGTTTGGGAAAAAAAAA AAAAAAAAAAAA



consensusID : consensus_12153#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 523
fasta sequence
                              [CGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACATCGATGGCATGGAC-GCAGC-GCACCAGCTCC-AGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTG-CTAGTTTTTTC-TGTGACTCCACATCTGTGATTGGCTGGGTGAAAAGTCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCA-GTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGAACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCT]

[+] EMBL BE230456             [CGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGACATCGATGGCATGGAC GCAGC GCACCAGCTCC AGCAGGATGTGGAAGCCAGCAATTGTGGCTGAGTGCATTG CTAGTTTTTTC TGTGACTCCACATCTGTGATTGGCTGGGTGAAAAGTCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCA GTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGAACTGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGTCCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCT]
[+] EMBL BI796358             [                                                             TCGATGGCATGGACAGCAGCGGCACCAGCTCCAAGCAGGATGTGGAAGCCAGC ATTGTGGCTGAGTCCATTGCCTAGTTTTTTCTTGTGACTCCACATCTGTGATT GCTGGGTGAAAAGTCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCACGTGAATTGGTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGAACTGTAGTGATTCTGTCCCCATTGACAGATGTAATTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAaaaa                                                                                                                          ]


>consensus_12153#2 CGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGTGGAAGTTCACCGCTGACGCGACAGAC ATCGATGGCATGGACGCAGCGCACCAGCTCCAGCAGGATGTGGAAGCCAGCAATTGTGGC TGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGTGATTGGCTGGGTGAAAAGTCT TGGGCTAATGAATGGCTTTGCTCGAAGCGCAGTGAATTGGTTTTGCTCTGCCCATATGTG TCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGAACTGTAGTGATTCTGACCCCATT GACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCTACTACGTGTGTTGGGATTGTG GATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAGATGCCGGCCAAGTGGCCATGGT CCTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATGTCTCCCAACCAATGGGGGAAGAC CTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACCAAAACCT



consensusID : consensus_12153#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 442
fasta sequence
                              [CAGATTGTCTTGAATGATCCTGTTGAGAAGTATATGATTCCATTTCAAGAAACCCAGCCATTGCATGCTGACTTAATCTTGGAGGAGGTTGTCATGCGATTCTTCAAGGATCCTGTAGTTCCTATTGTTGATGACTGGGGAAGCTGCGTGGGTATTGTTCACCGACAGGATTGTACCAAGATCGATGCGCCTCTTCTATCAATGTCGAGAGGACCACCGCTATGTGTTCCTACGTCCACCTCTGTCGAGCATGTCATAGATCTCCTCCTCAGAGAAAAATCTGAAATGGTGGTCGTGGTGAAAAGAGGCAACATGTACGAAGGCAGTTACGCATCCAGCTCGCGCCCGTTTGGGGAGTTTTCTCCCTCGCAATCTTGTTGGAAGTTCAACCGNTGACGGGACANGACAATCGATGGGCAATNGGACGGAAGCGGAACCAGTT]

[+] EMBL C73825               [CAGATTGTCTTGAATGATCCTGTTGAGAAGTATATGATTCCATTTCAAGAAACCCAGCCATTGCATGCTGACTTAATCTTGGAGGAGGTTGTCATGCGATTCTTCAAGGATCCTGTAGTTCCTATTGTTGATGACTGGGGAAGCTGCGTGGGTATTGTTCACCGACAGGATTGTACCAAGATCGATGCGCCTCTTCTATCAATGTCGAGAGGACCACCGCTATGTGTTCCTACGTCCACCTCTGTCGAGCATGTCATAGATCTCCTCCTCAGAGAAAAATCTGAAATGGTGGTCGTGGTGAAAAGAGGCAACATGTACGAAGGCAGTTACGCATCCAGCTCGCGCCCGTTTGGGGAGTTTTCTCCCTCGCAATCTTGTTGGAAGTTCAACCGNTGACGGGACANGACAATCGATGGGCAATNGGACGGAAGCGGAACCAGTT]


>consensus_12153#3 CAGATTGTCTTGAATGATCCTGTTGAGAAGTATATGATTCCATTTCAAGAAACCCAGCCA TTGCATGCTGACTTAATCTTGGAGGAGGTTGTCATGCGATTCTTCAAGGATCCTGTAGTT CCTATTGTTGATGACTGGGGAAGCTGCGTGGGTATTGTTCACCGACAGGATTGTACCAAG ATCGATGCGCCTCTTCTATCAATGTCGAGAGGACCACCGCTATGTGTTCCTACGTCCACC TCTGTCGAGCATGTCATAGATCTCCTCCTCAGAGAAAAATCTGAAATGGTGGTCGTGGTG AAAAGAGGCAACATGTACGAAGGCAGTTACGCATCCAGCTCGCGCCCGTTTGGGGAGTTT TCTCCCTCGCAATCTTGTTGGAAGTTCAACCGNTGACGGGACANGACAATCGATGGGCAA TNGGACGGAAGCGGAACCAGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12153#0      ------------------------------------------------------------
consensus_12153#2      ------------------------------------------------------------
consensus_12153#1      CACTCGCGTCTTCAAGGGATCCCGTAGAGTCCAATGCGCTCGAGGCCCTGGGGAAAGCCC 60
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      ------------------------------------------------------------
consensus_12153#2      ------------------------------------------------------------
consensus_12153#1      CCGGGGGTATTGTTCCCCCGCACGCCTTGGACCAAGATCGATGCGCCTCTTCCCTCAAGG 120
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      ------------------------------------------------------------
consensus_12153#2      ------------------------------------------------------------
consensus_12153#1      CCGAGAGGCCCCCCCCATATGTGTTCCTATGTGCACCTCCGTTGAGCAGGTGATAGATTT 180
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      --------------------AAATGGTGGTCGTGGTGAAAAGAGGCAACATGTACGAAGG 40
consensus_12153#2      ------------------------------------------------------------
consensus_12153#1      CCTCCTCACAGAAAAATTTGAAATGGTGGTCGTGGTGAAAAAAGGCAACATGTTCCAAGG 240
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      CAGTTACGCATCCAGCTCGCGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGT--GGAAG 98
consensus_12153#2      -------------------CGCCCGTTGGGAGTTTTCTCCCTCGCAATCTTGT--GGAAG 39
consensus_12153#1      CAGTTACGCATTCAGCTCGCGCCCGTTGGGAGTTTTTTCCCTCGCCATCTTGT--GGAAG 298
consensus_12153#3      ------------------------------CAGATTGTCTTGAATGATCCTGTTGAGAAG 30
                                                         ** **       *** ***   ****

consensus_12153#0      TTCACCGCTGACGCGACAGACATCGATGGCATGGACGCAGTGCACCAGCTCCAGCAGGAT 158
consensus_12153#2      TTCACCGCTGACGCGACAGACATCGATGGCATGGACGCAGCGCACCAGCTCCAGCAGGAT 99
consensus_12153#1      TTCACCGCTGACGCGCCCTACATCGATGGCATGGACGCAGCGCCCCAGCTTCAGCAGGAT 358
consensus_12153#3      TATATGATTCCATTTCAAGAAACCCAGCCATTGCATGCTG---ACTTAATCTTGGAGGAG 87
                       *  *    *          * * * *     ** * ** *    *    *   * **** 

consensus_12153#0      GTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGT 218
consensus_12153#2      GTGGAAGCCAGCAATTGTGGCTGAGTGCATTGCTAGTTTTTTCTGTGACTCCACATCTGT 159
consensus_12153#1      GTGGAAGCCAGCCATTGTGGCTGAGTGCCTTGCTAGTTTTTTCTGTGACTCCACATCTGT 418
consensus_12153#3      GTTG--TCATGCGATTCT--TCAAGGATCCTG-TAGTTCCTATTGTTG----ATGACTG- 137
                       ** *   *  ** *** *     **     ** *****  *  ***      *   *** 

consensus_12153#0      CATTAGCCCAG----GACTTTTCACCCAGCCAAT--------------CACAGTGAATTG 260
consensus_12153#2      GATTGGCTGGGTGAAAAGTCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCAGTGAATTG 219
consensus_12153#1      GATTGGCTGGGTGAAAAATCTTGGGCTAATGAATGGCTTTGCTCGAAGCGCAGTGAATTG 478
consensus_12153#3      GGGAAGCTGCGTGGGTATTGTTCACCGACAGGAT--------------TGTACCAAGATC 183
                            **   *     * * **   * *    **                 *   *  * 

consensus_12153#0      GTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGAAC 320
consensus_12153#2      GTTTTGCTCTGCCCATATGTGTCCATTGGGCCATAGCATAAAGCGTTGTCATCGACGAAC 279
consensus_12153#1      GTTTTGCTCTGCCCATATGTGTCCCTTGGGCCATAGCATAAAGCGTTGTTATCGACGAAC 538
consensus_12153#3      GATGCGCCTCTTCTATCAATGTCGAGAGGACCACCGC--TATGTGTTCCTA-CGTCCACC 240
                       * *  **     * **   ****    ** ***  **   * * ***   * ** * * *

consensus_12153#0      TGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCT 380
consensus_12153#2      TGTAGTGATTCTGACCCCATTGACAGATGTAGTTTGATGTACTACACATCAAAGTGGGCT 339
consensus_12153#1      TGTAGTGATTCTGTCCCCCCTGTCAAATGTAATTTGATGTACTACACATCAAAATGGGGT 598
consensus_12153#3      TCTGTCGAGCATGTC-------ATAGATCT--CCTCCTCAGAGAAAAATCTGAAATGGTG 291
                       * *   **   ** *         * ** *    *  *     * * ***  *   **  

consensus_12153#0      ACTAC-GTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAG 439
consensus_12153#2      ACTAC-GTGTGTTGGGATTGTGGATTGTGAGCCAATGGCACAGCTAGTTTGGGAACCAAG 398
consensus_12153#1      ACTACCGTGTGTTGGGATTGTGGATTGTTAACCAATGGCCCAGCTAGTTTGGGAAAAAAA 658
consensus_12153#3      GTCGTGGTGAAAAGAGGCAACATGTACGAAGGCAGTTACGCATCCAGCTCGCGCCC---- 347
                             ***    * *        *    *  ** *  * ** * ** * * *       

consensus_12153#0      ATGCCGGCCAAGTGGCCATGGTC-CTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATG 498
consensus_12153#2      ATGCCGGCCAAGTGGCCATGGTC-CTATCTTGTTCTGCTCGCATCCCGGGGTAGTCCATG 457
consensus_12153#1      AAAAAAAAAAAAAA---------------------------------------------- 672
consensus_12153#3      --GTTTGGGGAGTTTTCTCCCTCGCAATCTTGTTGGAAGTTCAACCGNTGACGGGACANG 405
                                 *                                                 

consensus_12153#0      TCTCCCAACCAATGGGGGA-AGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACC 557
consensus_12153#2      TCTCCCAACCAATGGGGGA-AGACCTCACCTGCCACCCCTTCGTCCTTCTCCGGGGGACC 516
consensus_12153#1      ------------------------------------------------------------
consensus_12153#3      AC----AATCGATGGGCAATNGGACGGAAGCGGAACCAGTT------------------- 442
                                                                                   

consensus_12153#0      AAAACCTTTTGCAACTGTGGGCGAAAACCGGCTCCAGAAGTCCCAGAGGTGACTGGTCTC 617
consensus_12153#2      AAAACCT----------------------------------------------------- 523
consensus_12153#1      ------------------------------------------------------------
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      TGCGACTACTGTATGTTGAAATGCTTTTTTCGACGGATGCAGCTGCATTTGTAATAACAC 677
consensus_12153#2      ------------------------------------------------------------
consensus_12153#1      ------------------------------------------------------------
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      CCCATCTTTATTCGGTCGGTACTCTTCCTGCATAACTGAATAAAAAAGCCTGTTACTAGC 737
consensus_12153#2      ------------------------------------------------------------
consensus_12153#1      ------------------------------------------------------------
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      AGGGTTTACATTACTGTCAGTAGCCGCGCGGTTACTGGCTTTACCGTGGGGGTACGGTAA 797
consensus_12153#2      ------------------------------------------------------------
consensus_12153#1      ------------------------------------------------------------
consensus_12153#3      ------------------------------------------------------------
                                                                                   

consensus_12153#0      TAGAAAAACCACGGTTACCTCTTTAAAAAAAAAAGA 833
consensus_12153#2      ------------------------------------
consensus_12153#1      ------------------------------------
consensus_12153#3      ------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)