cluster # 12155

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Oryza sativa
cluster # 12155 cluster # 12155 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12155#0 length = 1203 sequences # 6
consensus_12155#1 length = 764 sequences # 1

consensus_12155#2 length = 706 sequences # 1
consensus_12155#3 length = 392 sequences # 1
consensus_12155#4 length = 112 sequences # 1

consensusID : consensus_12155#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1203
fasta sequence

                              [TGCCACAAGAGATCGGCGGCGGGGCAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAGCGAGGAGGAGGAAGAGCTGCTCACCGACCTCTCCCGCTACCGCCGCTACTGGACGGATCTGTGGTCCGACGTTTCCGGCGACATCGCCAAAAGAACTGAGTTTGGTCCCATGCGGTACACGGAGGAACCGGTGCCCCCGTTCGC-AAAGCTCCAAGATTTACTAGAGGTTTTTTCTTTTGAGGTGACTGAGCTGAAAGGTA-TTCT-AAGCTGGCCAATAGATGTGTTTGGCCTCATCTCTGTCCGTGACTCGCTGGACCGGAATCGCAACTATATCTTTGAGCGCACCAGGAACTACTGCCAGACTCTCACTGCAAAGGATTCATCTCTGGTTCTCACTGGTCCAAGCCGTGCAGTCCAATTGATTGACCCTGTTGAATTTGAAATTGAGCTAAGAGTCAAGGGGACAAGTCCCTCCAAAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAACTGCATTGCTCAGAGACTCAGATGTGGCTCACTCCGCAGTATGATGTTATCAGGAGCACGCAGCACATTGGAGTTCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCGCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCATCTTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATACTTAATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACTAATATGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCTACTCTATATCAT-AAAAATGCTATTATTATTCACCTATTTGTAGATAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK122037             [TGCCACAAGAGATCGGCGGCGGGGCAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAGCGAGGAGGAGGAAGAGCTGCTCACCGACCTCTCCCGCTACCGCCGCTACTGGACGGATCTGTGGTCCGACGTTTCCGGCGACATCGCCAAAAGAACTGAGTTTGGTCCCATGCGGTACACGGAGGAACCGGTGCCCCCGTTCGC AAAGCTCCAAGATTTACTAGAGGTTTTTTCTTTTGAGGTGACTGAGCTGAAAGGTA TTCT AAGCTGGCCAATAGATGTGTTTGGCCTCATCTCTGTCCGTGACTCGCTGGACCGGAATCGCAACTATATCTTTGAGCGCACCAGGAACTACTGCCAGACTCTCACTGCAAAGGATTCATCTCTGGTTCTCACTGGTCCAAGCCGTGCAGTCCAATTGATTGACCCTGTTGAATTTGAAATTGAGCTAAGAGTCAAGGGGACAAGTCCCTCCAAAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAACTGCATTGCTCAGAGACTCAGATGTGGCTCACTCCGCAGTATGATGTTATCAGGAGCACGCAGCACATTGGAGTTCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCGCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCATCTTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATACTTAATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACTAATATGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCTACTCTATATCAT AAAAATGCTATTA                                          ]
[+] EMBL AU165896             [TGCCACAAGAGATCGGCGGCGGGGCAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAGCGAGGAGGAGGAAGAGCTGCTCACCGACCTCTCCCGCTACCGCCGCTACTGGACGGATCTGTGGTCCGACGTTTCCGGCGACATCGCCAAAAGAACTGAGTTTGGTCCCATGCGGTACACGGAGGAACCGGTGCCCCCGTTCGC AAAGCTCCAAGATTTACTAGAGGTTTTTTCTTTTGAGGTGACTGAGCTGAAAGGTA TTCT AAGCTGGCCAATAGATGTGTTTGGCCTCATCTCTGTCCGTGACTCGCTGGACCGGAATCGCAACTATATCTTTGAGCGCACCAGGAACTACTGCCAGACTCTCACTGCAAAGGATTCATCTCTGGTct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C91837               [TGCCACAAGAGATCGGCGGCGGGGCAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAGCGAGGAGGAGGAAGAGCTGCTCACCGACCTCTNCCGCTACCGCCGCTACTGGACGGATCTGTGGTNCGACGTTTCCGGCGACATCG CAAAAGAACTGAGTTTGGTCCCATGCGGTACAACGAGGAACCGGTGCCCCCGTTCGCAAAAGTTCCAAGATTTACTAGAGGTTTTTTCTTTTGAGGTGACTNAGCTNAAAGGTATTTNTAAAGTTGGCCAATAGATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU094798             [                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGACCCTGTTG ATTTGAAATTGAGCTAAGAGTCAAGGGGACAAGTCCCTCCAAAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAACTGCATTGCTCAGAGACTCAGATGTGGCTCACTCCGCAGTATGATGTTATCAGGAGCACGCAGCACATTGGAGTTCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCGCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCATCTTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATACTTAATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACTAATATGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCTACTCTATATCAT AAAAATGCTATTATTATTCACCTATTTGTAGATAAAAAAAA              ]
[+] EMBL CB096339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTCCAAAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAACTGCATTGCTCAGAGACTCAGATGTGGCTCACTCCGCAGTATGATGTTATCAGGAGCACGCAGCACATTGGAGTTCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGGTGGAGCCATTAATTTCTCCCGCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCATCTTTTAATATTGAAAAAAGTATAGGCCCTGATAATATTTTTCTTGCATATGACAATACTTAATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCACTGTAATACACTAATATGACAGTACTGAATTTGGACCGGGGGCCTCACGATCCATGCCATTGNAAATTTGCTACTCTATATCATAAAAAATGCTATTATTATTCACCTATTT                            ]
[-] EMBL CA759823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGGTATAACTGCATTG TCAGAGACTCAGATG GGCTCACTCCCCAGTATGATGTTATCAGGAGCACGCAGCACATTGGAGTTCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGCCAGGATTACTAGGGGTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCCCAGTGTAGTTCCAGTTGAAGGAAATGGCGGAGTTTTGACTGTTGGTGTTCATGCAAGGAAGAGTGGTGGTGAGAATTTGAGATGTTTTTATAAAGAGTTTATCCCGGTAAAATGTGGAGGGAGTCATGACCCCCTTGATGTTGGGTTTTGCCAGATAAGCGTTGAAGTTGCTTGGTCGCTCATCTTTTAATATTGAAAAAAGTATAGGCCCTGATAATATTTTTCTTGCATATGCCAATACTTAATTTTCGGTTTTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCCCTGTAATCCCCTAATATGCCAGTACTGAATTTGGGCCGGGGGCCTCCCGATCCATGCCATTGTAAATTTGCTACTCTATATCAT AAAAATGCTATTATTTTTCCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12155#0
TGCCACAAGAGATCGGCGGCGGGGCAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGAT
GGCAGCGAGGAGGAGGAAGAGCTGCTCACCGACCTCTCCCGCTACCGCCGCTACTGGACG
GATCTGTGGTCCGACGTTTCCGGCGACATCGCCAAAAGAACTGAGTTTGGTCCCATGCGG
TACACGGAGGAACCGGTGCCCCCGTTCGCAAAGCTCCAAGATTTACTAGAGGTTTTTTCT
TTTGAGGTGACTGAGCTGAAAGGTATTCTAAGCTGGCCAATAGATGTGTTTGGCCTCATC
TCTGTCCGTGACTCGCTGGACCGGAATCGCAACTATATCTTTGAGCGCACCAGGAACTAC
TGCCAGACTCTCACTGCAAAGGATTCATCTCTGGTTCTCACTGGTCCAAGCCGTGCAGTC
CAATTGATTGACCCTGTTGAATTTGAAATTGAGCTAAGAGTCAAGGGGACAAGTCCCTCC
AAAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAACTGCATTGCTCAGAGACTCAGA
TGTGGCTCACTCCGCAGTATGATGTTATCAGGAGCACGCAGCACATTGGAGTTCAAGTAT
GCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTTCAACT
GATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTG
GACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCGCAGT
GTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAGT
GGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCCGGTAAGATGTGGACGGAGT
CATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCATC
TTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATACTTA
ATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACTAATA
TGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCTACTC
TATATCATAAAAATGCTATTATTATTCACCTATTTGTAGATAAAAAAAAAAAAAAAAAAA
AAA

consensusID : consensus_12155#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 764
fasta sequence

                              [GATGGCCGTTGCGGCGAAGCCGGAGGCGGGGGAGGGGGAGGCGACTAATTGCCACAGGAGATCGGCGGCGGGGCACGAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAACGATGAGGAGGAAGAGCTGCTCACCGAGCTCTCCCGCTACCGCCGCTACTGGACGGATCTTTGGTCCGACGATTCCGGCGACATTGACAGAAGAACTGAGATTGGTCCCATGCGGTACACGGAGGAATCGCCCCGGTTCGCAATGCTCCTGGATTTACTTGAGGTTTTTTCTTTTGAGGTGACCGAGCTGAAAGGTATTCTACGCTGGCCAATAGATGTGTTTGGTCTCATCTCCGTTCGTGACTCTCTGGACCGGAACCGCAACTATATCTTTGAGCGCACCAGGAACAACTGCCAGACTCTCACTGCAAAGGATTCATCTCTGGTTCTTACTGGTCCAAGCCGTGCAATCCTATTGATGGACCCTATTGAATTTGAAATTGAGCTAAGAGTCAAGGGGACAAGTCCCTCCGAAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAATGGCACCGCTCAGAGACACAGATGTGGCTCACTCCGCAGTATGTTGTTATCACGAGCACGCAGCACATTGGAGTTCAAGTATGCTCACATTCCTGTGGCATTGGAGGCTACAATCAATGTCAAGATTACATGAGGCTTAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCCTAT]

[+] EMBL CB680419             [GATGGCCGTTGCGGCGAAGCCGGAGGCGGGGGAGGGGGAGGCGACTAATTGCCACAGGAGATCGGCGGCGGGGCACGAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAACGATGAGGAGGAAGAGCTGCTCACCGAGCTCTCCCGCTACCGCCGCTACTGGACGGATCTTTGGTCCGACGATTCCGGCGACATTGACAGAAGAACTGAGATTGGTCCCATGCGGTACACGGAGGAATCGCCCCGGTTCGCAATGCTCCTGGATTTACTTGAGGTTTTTTCTTTTGAGGTGACCGAGCTGAAAGGTATTCTACGCTGGCCAATAGATGTGTTTGGTCTCATCTCCGTTCGTGACTCTCTGGACCGGAACCGCAACTATATCTTTGAGCGCACCAGGAACAACTGCCAGACTCTCACTGCAAAGGATTCATCTCTGGTTCTTACTGGTCCAAGCCGTGCAATCCTATTGATGGACCCTATTGAATTTGAAATTGAGCTAAGAGTCAAGGGGACAAGTCCCTCCGAAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAATGGCACCGCTCAGAGACACAGATGTGGCTCACTCCGCAGTATGTTGTTATCACGAGCACGCAGCACATTGGAGTTCAAGTATGCTCACATTCCTGTGGCATTGGAGGCTACAATCAATGTCAAGATTACATGAGGCTTAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCCTAT]




>consensus_12155#1
GATGGCCGTTGCGGCGAAGCCGGAGGCGGGGGAGGGGGAGGCGACTAATTGCCACAGGAG
ATCGGCGGCGGGGCACGAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAACGA
TGAGGAGGAAGAGCTGCTCACCGAGCTCTCCCGCTACCGCCGCTACTGGACGGATCTTTG
GTCCGACGATTCCGGCGACATTGACAGAAGAACTGAGATTGGTCCCATGCGGTACACGGA
GGAATCGCCCCGGTTCGCAATGCTCCTGGATTTACTTGAGGTTTTTTCTTTTGAGGTGAC
CGAGCTGAAAGGTATTCTACGCTGGCCAATAGATGTGTTTGGTCTCATCTCCGTTCGTGA
CTCTCTGGACCGGAACCGCAACTATATCTTTGAGCGCACCAGGAACAACTGCCAGACTCT
CACTGCAAAGGATTCATCTCTGGTTCTTACTGGTCCAAGCCGTGCAATCCTATTGATGGA
CCCTATTGAATTTGAAATTGAGCTAAGAGTCAAGGGGACAAGTCCCTCCGAAGATAAGAT
CTTGAGCGCTGAAGCATTTGGGTATAATGGCACCGCTCAGAGACACAGATGTGGCTCACT
CCGCAGTATGTTGTTATCACGAGCACGCAGCACATTGGAGTTCAAGTATGCTCACATTCC
TGTGGCATTGGAGGCTACAATCAATGTCAAGATTACATGAGGCTTAACTGATTTCTGTGG
AAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCCTAT

consensusID : consensus_12155#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 706
fasta sequence

                              [CCCCTCCAAAGTTAGATNCTTGAGCCTGAAGCATTTGGGTNTAACTGCATTGCTCAGANCTCAGATGTGGCTCACTCCCCAGTATGATGTTATCAGGAGCACGCAGCACATTGGNGTTCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCGCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCATCTTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATACTTAATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACTAATATGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCTACTCTATATCATAAAAATGCTATTATTATTCAAAAAAAAAAAAAAA]

[+] EMBL AU030901             [CCCCTCCAAAGTTAGATNCTTGAGCCTGAAGCATTTGGGTNTAACTGCATTGCTCAGANCTCAGATGTGGCTCACTCCCCAGTATGATGTTATCAGGAGCACGCAGCACATTGGNGTTCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCGCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCATCTTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATACTTAATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACTAATATGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCTACTCTATATCATAAAAATGCTATTATTATTCAAAAAAAAAAAAAAA]




>consensus_12155#2
CCCCTCCAAAGTTAGATNCTTGAGCCTGAAGCATTTGGGTNTAACTGCATTGCTCAGANC
TCAGATGTGGCTCACTCCCCAGTATGATGTTATCAGGAGCACGCAGCACATTGGNGTTCA
AGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGGGTT
CAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATAT
TGCTGGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCC
GCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGC
AGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCGGTAAGATGTGGACG
GAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCT
CATCTTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATA
CTTAATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACT
AATATGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCT
ACTCTATATCATAAAAATGCTATTATTATTCAAAAAAAAAAAAAAA

consensusID : consensus_12155#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 392
fasta sequence

                              [CTCCCGCAGTGTGGTTGCAGTTGAAGGAAATGGTGTGCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGATGAGAATAACAGCTGTGATTACAAGAATTTTATCCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGTGTTGAAGTTGCTTGGTCGCTCATGCTTTCATATTGAAAAAACATAGGCCCGATAATATTATATTTTTCCAAGTCTAGGCCCTGATAATTTTGCTTGCTGTGACACGAGCTGTTTGCTCGATGGCATTGTAATATACTGATATGACAATACTTAATATTCGGTGTTAGTAGTTCATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF328140             [CTCCCGCAGTGTGGTTGCAGTTGAAGGAAATGGTGTGCTGACTGTTGGTGTTCATGCAAGGCAGAGTGGTGATGAGAATAACAGCTGTGATTACAAGAATTTTATCCCGGTAAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGTGTTGAAGTTGCTTGGTCGCTCATGCTTTCATATTGAAAAAACATAGGCCCGATAATATTATATTTTTCCAAGTCTAGGCCCTGATAATTTTGCTTGCTGTGACACGAGCTGTTTGCTCGATGGCATTGTAATATACTGATATGACAATACTTAATATTCGGTGTTAGTAGTTCATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12155#3
CTCCCGCAGTGTGGTTGCAGTTGAAGGAAATGGTGTGCTGACTGTTGGTGTTCATGCAAG
GCAGAGTGGTGATGAGAATAACAGCTGTGATTACAAGAATTTTATCCCGGTAAGATGTGG
ACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGTGTTGAAGTTGCTTGGTC
GCTCATGCTTTCATATTGAAAAAACATAGGCCCGATAATATTATATTTTTCCAAGTCTAG
GCCCTGATAATTTTGCTTGCTGTGACACGAGCTGTTTGCTCGATGGCATTGTAATATACT
GATATGACAATACTTAATATTCGGTGTTAGTAGTTCATTTTTTTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12155#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 112
fasta sequence

                              [CATATTGAAAAAACATAGGCCCGATAATATTATATTTTGCCAGTCTAGGCCCTGATAATTTTGCCTTGCTGTGGACACAAAGCTGTTTGCTCGAGGCATTTTGAATATACTG]

[+] EMBL AA749636             [CATATTGAAAAAACATAGGCCCGATAATATTATATTTTGCCAGTCTAGGCCCTGATAATTTTGCCTTGCTGTGGACACAAAGCTGTTTGCTCGAGGCATTTTGAATATACTG]




>consensus_12155#4
CATATTGAAAAAACATAGGCCCGATAATATTATATTTTGCCAGTCTAGGCCCTGATAATT
TTGCCTTGCTGTGGACACAAAGCTGTTTGCTCGAGGCATTTTGAATATACTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12155#0      -------------------------------------------------TGCCACAAGAG 11
consensus_12155#1      GATGGCCGTTGCGGCGAAGCCGGAGGCGGGGGAGGGGGAGGCGACTAATTGCCACAGGAG 60
consensus_12155#2      CCCCTCCAAAGTTAGATNCTTGAGCCTGAAGCATTTGGGTNTAACTGCATTGCTCA-GAN 59
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      ATCGGCGGCGGGGCA---GGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAGCGA 68
consensus_12155#1      ATCGGCGGCGGGGCACGAGGAGGAGGAGGAGGAGTCGAAGAGGCCACGCGATGGCAACGA 120
consensus_12155#2      CTCAGATGTGGCTCAC--TCCCCAGTATGATGTTATCAGGAGCACGCAGCACATTGGNGT 117
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      GGAGGAGGAAGAGCTGCTCACCGACCTCTCCCGCTACCGCCGCTACTGGACGGATCTGTG 128
consensus_12155#1      TGAGGAGGAAGAGCTGCTCACCGAGCTCTCCCGCTACCGCCGCTACTGGACGGATCTTTG 180
consensus_12155#2      TCAAGTATGCACACATTCCTTTGGCATTGGAGGCTACAATCAAGGTCAGGATTACTAGGG 177
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      GTCCGAC-GTTTCCGGCGACATCGCCAAAAGAACTGAGTTTGGTCCCATGCGGTACACGG 187
consensus_12155#1      GTCCGAC-GATTCCGGCGACATTGACAGAAGAACTGAGATTGGTCCCATGCGGTACACGG 239
consensus_12155#2      GTTCAACTGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCA 237
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      AGGAACCGGTGCCCCCGTTCGCAAAGCTCCAAGATTTACTAGAGGTTTTTTCTTTTGAGG 247
consensus_12155#1      AGGAATCG---CCCCGGTTCGCAATGCTCCTGGATTTACTTGAGGTTTTTTCTTTTGAGG 296
consensus_12155#2      TATTGCTGGACTCTGGAGAAGAAATGGT---GGCTATCTCCCATGATGGAGCCATTAATT 294
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      TGACTGAGCTGAAAGGTATTCTAAGCTG--GCCAATAGATGTGTTTGGCCTCATCTCTGT 305
consensus_12155#1      TGACCGAGCTGAAAGGTATTCTACGCTG--GCCAATAGATGTGTTTGGTCTCATCTCCGT 354
consensus_12155#2      TCTC----CCGCAGTGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACT-GTTGGTGT 349
consensus_12155#3      ---------CTCCCGCAGTGTGGTTGCAGTTGAAGGAAATGGTGTGCTGACTGTTGGTGT 51
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      CCGTGACTCGCTGGACCGGAATCGCAACTAT-ATCTTTGAGCGCACCAGGAACTACTGCC 364
consensus_12155#1      TCGTGACTCTCTGGACCGGAACCGCAACTAT-ATCTTTGAGCGCACCAGGAACAACTGCC 413
consensus_12155#2      TCATG-CAAGGCAGAGTGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCGGT 408
consensus_12155#3      TCATGCAAGGCAGAGTGGTGATGAGAATAACAGCTGTGATTACAAGAATTTTATCCCGGT 111
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      AGACTCTCACTGCAAAGGATTCATCTCTGGTTCTCACTGGTCCAAGCCGTGCAGTCCAAT 424
consensus_12155#1      AGACTCTCACTGCAAAGGATTCATCTCTGGTTCTTACTGGTCCAAGCCGTGCAATCCTAT 473
consensus_12155#2      AAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGT 468
consensus_12155#3      AAGATGTGGACGGAGTCATGACACACTTGATGTTGGATTTTGCCAGATGAGTGTTGAAGT 171
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      TGATTGACCCTGTTGAATTTGAAATTGAGCTAAGAGTCAAGGG---GACAAGTCCCTCCA 481
consensus_12155#1      TGATGGACCCTATTGAATTTGAAATTGAGCTAAGAGTCAAGGG---GACAAGTCCCTCCG 530
consensus_12155#2      TGCTTGGTCGCTCATCTTTTAATATTGAA--AAAAGTCTAGGCCCTGATAATATTTTTCT 526
consensus_12155#3      TGCTTGGTCGCTCATGCTTTCATATTGAA----AAAACATAGGCCCGATAATATTATATT 227
consensus_12155#4      --------------------CATATTGAA----AAAACATAGGCCCGATAATATTATATT 36
                                            * *****      *  *   *    ** **     *   

consensus_12155#0      AAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAACTGCATTGCTCAGAGACTCAGAT 541
consensus_12155#1      AAGATAAGATCTTGAGCGCTGAAGCATTTGGGTATAATGGCACCGCTCAGAGACACAGAT 590
consensus_12155#2      TGCATATGAC----AATACTTAA-TATTCGGTATTAGTAGTG------GAAGTAATAGAT 575
consensus_12155#3      TTTCCAAGTC--TAGGCCCTGAT-AATTTTGC-TTGCTGT----------G-ACACGA-- 270
consensus_12155#4      TTGCCA-GTC--TAGGCCCTGAT-AATTTTGCCTTGCTGT----------GGACACAAA- 81
                            * *          ** *   ***  *   *                         

consensus_12155#0      GTGGCTCACTCCGCAGTATGATGTTATCAGGAGCACGCAGCACATTGGAGTTCAAGTATG 601
consensus_12155#1      GTGGCTCACTCCGCAGTATGTTGTTATCACGAGCACGCAGCACATTGGAGTTCAAGTATG 650
consensus_12155#2      GTGCTCCGTGGCATTGTAATACACTAATATGACAGTACTGAGT-TTGGA---CCGGGGGC 631
consensus_12155#3      GCTGTTTGCTCGATGGCATTGT-AATATACTGATATGACAATACTTAATATTCGGTGTTA 329
consensus_12155#4      GCTGTTTGCTCGA-GGCATTTTGAATATACTG---------------------------- 112
                       *              * *          *                               

consensus_12155#0      CACACATTCCTTTGGCATTGGAGGCTA--CAATCAAGGTCAGGATTACTAGGGGTTCAAC 659
consensus_12155#1      CTCACATTCCTGTGGCATTGGAGGCTA--CAATCAATGTCAAGATTACATGAGGCTTAAC 708
consensus_12155#2      CTCACGATCC-ATGCCATTGTAAATTTGCTACTCTATATCATAAAAATGCTATTATTATT 690
consensus_12155#3      GTAGTTCATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 389
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      TGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCATATTGCT 719
consensus_12155#1      TGATTTCTGTGGAAAGTTCATTGCACATACTGCTAGTATCAAGGAAGATGTCCTAT---- 764
consensus_12155#2      CAAAAAAAAAAAAAAA-------------------------------------------- 706
consensus_12155#3      AAA--------------------------------------------------------- 392
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      GGACTCTGGAGAAGAAATGGTGGCTATCTCCCATGATGGAGCCATTAATTTCTCCCGCAG 779
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      TGTAGTTGCAGTTGAAGGAAATGGCGGAGTTCTGACTGTTGGTGTTCATGCAAGGCAGAG 839
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      TGGTGGTGAGAATATGAGATGTTCTTATAAAGAGTTTATCCCGGTAAGATGTGGACGGAG 899
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      TCATGACACACTTGATGTTGGATTTTGCCAGATGAGCGTTGAAGTTGCTTGGTCGCTCAT 959
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      CTTTTAATATTGAAAAAAGTCTAGGCCCTGATAATATTTTTCTTGCATATGACAATACTT 1019
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      AATATTCGGTATTAGTAGTGGAAGTAATAGATGTGCTCCGTGGCATTGTAATACACTAAT 1079
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      ATGACAGTACTGAGTTTGGACCGGGGGCCTCACGATCCATGCCATTGTAAATTTGCTACT 1139
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      CTATATCATAAAAATGCTATTATTATTCACCTATTTGTAGATAAAAAAAAAAAAAAAAAA 1199
consensus_12155#1      ------------------------------------------------------------
consensus_12155#2      ------------------------------------------------------------
consensus_12155#3      ------------------------------------------------------------
consensus_12155#4      ------------------------------------------------------------
                                                                                   

consensus_12155#0      AAAA 1203
consensus_12155#1      ----
consensus_12155#2      ----
consensus_12155#3      ----
consensus_12155#4      ----