These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12156#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3118 fasta sequence [GCTTGCCCCGCCGCCTTCCTCGCGACCCCCCCCCCTCTCCTCTCGCCGCCGCCGCGTCCGCTCCACCCGGCGGCGGAGTACTCTCCATCCGCCGCCGCCGCTTGGTACTAGATTTGTGCTGGTAGCCGCGTAGATCTAACTAGAGAGAGAGAGAGAAGGGAGTGAGTGGCGAGGATGAGCGTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCCGTGGCGCGGCAGCGGGGCATCGACGTGGTGCTCAACGAGGAGTCGAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCAAGGTACCTTGGGGAGGACAGGGCGTTCACCCCCATGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGAATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTT--GGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGCCCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACTGATGCCAAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGATTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAAATGGCTCTTCAGGACAGAGTAATGGAAGACACCAAGGAGAAAAAGAATGCTGTCGAGGCTTATGTTTATGACATGCGTAACAAGCTCTATGACAAGTACAACGATTTTGTCATGTCTGAGTACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTACGAAGATGGTGAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTTGGTGATCCTATTGAGATCCGCTACAAAGAGTGGGCTGAAAGAAGCTCTTCTATTAACCAGCTGGTACATTGCATCAACGGTTTTAAAGAGGTTGCATTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA-TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA-TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA-TGAGCTAGGA-GAACCGGATG-TTTTTTT--GGGGTGCT-GTACTT-GGTGGTCAC-TTCA--CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCAC-TTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCCAATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCATGGGAAAAAAAGATCTCAATACATTTTTTA] [+] EMBL AK122040 [GCTTGCCCCGCCGCCTTCCTCGCGACCCCCCCCCCTCTCCTCTCGCCGCCGCCGCGTCCGCTCCACCCGGCGGCGGAGTACTCTCCATCCGCCGCCGCCGCTTGGTACTAGATTTGTGCTGGTAGCCGCGTAGATCTAACTAGAGAGAGAGAGAGAAGGGAGTGAGTGGCGAGGATGAGCGTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCCGTGGCGCGGCAGCGGGGCATCGACGTGGTGCTCAACGAGGAGTCGAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCAAGGTACCTTGGGGAGGACAGGGCGTTCACCCCCATGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGAATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTT GGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGCCCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACTGATGCCAAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGATTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAAATGGCTCTTCAGGACAGAGTAATGGAAGACACCAAGGAGAAAAAGAATGCTGTCGAGGCTTATGTTTATGACATGCGTAACAAGCTCTATGACAAGTACAACGATTTTGTCATGTCTGAGTACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTACGAAGATGGTGAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTTGGTGATCCTATTGAGATCCGCTACAAAGAGTGGGCTGAAAGAAGCTCTTCTATTAACCAGCTGGTACATTGCATCAACGGTTTTAAAGAGGTTGCATTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA TGAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCAC TTCA CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCAC TTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCCAATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCATGGGAAGAAACGCTCTCAATACATTTTTTA] [+] EMBL CB634367 [ GACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCCAGGTATCTCGGGGAGGACAGGGCGTTCACCCCCACGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGGATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGATAAATTTAAGGATGAGTACAAAATAGACGTCTACCAGAATGCCCGCGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGA ] [+] EMBL CA755265 [ GCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGAATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACNACGTGTGAAGGCTCCATTGGGAAAGGCCTTGGCTGAAGCTGGCTTAAC ACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTTTGGGAAGGGAACCGAGGAGGACTATGAATGCCAGTG ] [+] EMBL CB668414 [ TGCTACTACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTT GGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGCCCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAAT ] [-] EMBL CB634368 [ CAACGGTTTTAAAGAGGTTGCGTTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAAAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA TGAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCAC TTCA CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCACTTTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCCAATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCA AAAAAAAGA ] [-] EMBL CB668415 [ GGTTGCATTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGANTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAA TGAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCAC TTCA CTTGGTTGGGATTGTGACATGGACATGTTGGTAAGGGTAAAATGCTGGTGGCTTGTCCCTTGAATCACTTTTTTTTTCTTCTCTTATTTAGGATGGTTGAATTGGGGATGAGAGGGCATGCCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTTTAAACTGTAGCTTTTGTCCAATGGTCCATAACATGTAAGGAAAAACAAATTTTGGTCCATGGGAAAAAAAaaaaaga ] [+] EMBL AU066294 [ AGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGG CCGTG A TGAGCTAGGA G ACCGGATGTTTTTTTT GGGGTACTNGNACTT GGTGGT AA TTCA CTT GTTGGGATTGTGA ATGGANATGTTGGTA GGT NAATGCTGGT GC TATCCCTTGAATCAC TTTTTTTcaccctaa ] [+] EMBL AU066203 [ AGCACTTGACAGGTCGTGCAGACCGA TTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAA TGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAATTAAGCTAGGA GAACCGGATG TTTTTTT GGGGTGCT GTACTT GGTGGTCACTTTCA CTTGGTTGGGATTGTGACATGGA ] [+] EMBL AU066289 [ AGCACTTGACAGGTCGTGCAGA CGANTTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAAGAACTCCTGTGATCGAANTGCTTCCTCATGTGGTTATGGTCACTTNGTTTTAGGGCCGTGAA TGAGCTAGGAGGAACCGGATG TTTTTTTTGGGGGTGCT GTACTTNGGTGGGCAC TTTAANTTTGGTTGGG ] consensusID : consensus_12156#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence [TTCCGCNCGATGTTCNATCCNCGGAAAAAANTAANTGNTCTAGTCACAANTAAACTCCNNTGNTCNAATNCTTCCTCANGTNGTTNTNGCCNCNCCGTAATACGCCCCTGAATGANCTANGANAACCCGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTTTGGGGATTGTGACATGGACATNTTTGTAACGGGTNAAGGNGGGGGTGGGCTTTCTCCCTTGNANTCACTTTTANTTTCTCCTCCANATCCNGGACGGTNNAATTNGGGGATCANAAGGGGTGGNCACCCCCCGTTTNTCCNGGCTTTGGTTCANCACGGGTTCTTAACCTTTACCCCTGGGT] [+] EMBL BE228241 [TTCCGCNCGATGTTCNATCCNCGGAAAAAANTAANTGNTCTAGTCACAANTAAACTCCNNTGNTCNAATNCTTCCTCANGTNGTTNTNGCCNCNCCGTAATACGCCCCTGAATGANCTANGANAACCCGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTTTGGGGATTGTGACATGGACATNTTTGTAACGGGTNAAGGNGGGGGTGGGCTTTCTCCCTTGNANTCACTTTTANTTTCTCCTCCANATCCNGGACGGTNNAATTNGGGGATCANAAGGGGTGGNCACCCCCCGTTTNTCCNGGCTTTGGTTCANCACGGGTTCTTAACCTTTACCCCTGGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12156#0 GCTTGCCCCGCCGCCTTCCTCGCGACCCCCCCCCCTCTCCTCTCGCCGCCGCCGCGTCCG 60 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CTCCACCCGGCGGCGGAGTACTCTCCATCCGCCGCCGCCGCTTGGTACTAGATTTGTGCT 120 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GGTAGCCGCGTAGATCTAACTAGAGAGAGAGAGAGAAGGGAGTGAGTGGCGAGGATGAGC 180 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCCGTGGCGCGGCAGCGGGGC 240 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 ATCGACGTGGTGCTCAACGAGGAGTCGAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGC 300 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAAC 360 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 TCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGC 420 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCAC 480 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GCAAGGTACCTTGGGGAGGACAGGGCGTTCACCCCCATGCAGCTGCTCGCCATGGTGCTC 540 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 TCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATT 600 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATC 660 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGA 720 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 ATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGG 780 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCG 840 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTT 900 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GCGGAGAAATTTAAGGACGAGTACAAAATAGACGTCTACCAGAATGCCCGTGCGTGCGTT 960 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 AGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCA 1020 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAG 1080 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 TTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTG 1140 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCT 1200 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTTGGAAAGGAACCGAGGAGGACT 1260 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 ATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCC 1320 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 ACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCA 1380 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 TGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCCCAAAAGGAAGT 1440 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTT 1500 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GTGAGTGTCGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGC 1560 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CCTTTCCAATCCAGCAAACCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATC 1620 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTA 1680 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGT 1740 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GACCCTGCTTCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACT 1800 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACT 1860 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GATGCCAAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGA 1920 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 TTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAA 1980 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 ATGGCTCTTCAGGACAGAGTAATGGAAGACACCAAGGAGAAAAAGAATGCTGTCGAGGCT 2040 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 TATGTTTATGACATGCGTAACAAGCTCTATGACAAGTACAACGATTTTGTCATGTCTGAG 2100 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 TACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTACGAAGATGGT 2160 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTTGGTGAT 2220 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CCTATTGAGATCCGCTACAAAGAGTGGGCTGAAAGAAGCTCTTCTATTAACCAGCTGGTA 2280 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 CATTGCATCAACGGTTTTAAAGAGGTTGCATTGTCTAATAGCCAAGCATTTGATCACATC 2340 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GACATGTCAGAAAAACAGAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATA 2400 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCT 2460 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGATTATGTCAAAGCCG 2520 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 AAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACA 2580 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 ACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAA 2640 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACA 2700 consensus_12156#1 ------------------------------------------------------------ consensus_12156#0 GACAAACCTGACGGTTGGGCCGAACCATCGGCATAAGTTTGTTGTCGACAAACTAA-GAA 2759 consensus_12156#1 ----TTCCGCNCGAT--GTTCNATCCNCGGAAAAAANTAANTGNTCTAGTCACAANTAAA 54 ** ** * * * * ** * * ** * * ** * ** * ** consensus_12156#0 CTCCTGTGATCGAATGCTTCCTCATGTGGTTATGGTCACTTGGTTTTAGGCCCGTGAATG 2819 consensus_12156#1 CTCCNNTGNTCNAATNCTTCCTCANGTNGTTNTNGCCNCNCCGTAATACGCCCCTGAATG 114 **** ** ** *** ******** ** *** * * * * ** ** **** ****** consensus_12156#0 AGCTAGGAGAACCGGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTT- 2878 consensus_12156#1 ANCTANGANAACCCGATGTTTTTTTGGGGTGCTGTACTTGGTGGTCACTTCACTTGGTTT 174 * *** ** **** ********************************************* consensus_12156#0 -GGGATTGTGACATGGACATGTTGGTAAGGG--TAAAATGCTGGTGG--CTTGTCCCTTG 2933 consensus_12156#1 GGGGATTGTGACATGGACATNTTTGTAACGGGTNAAGGNGGGGGTGGGCTTTCTCCCTTG 234 ******************* ** **** ** ** * ***** ** ******* consensus_12156#0 AAT-CACTTTT-TTTTCTTCTCT-TATTTAGGATGGTTGAATTGGGG-ATGAGAGGGCAT 2989 consensus_12156#1 NANTCACTTTTANTTTCTCCTCCANATCCNGGACGGTNNAATTNGGGGATCANAAGGGGT 294 * ******* ***** *** ** *** *** **** *** ** * * ** * consensus_12156#0 G-CCACCACCCATTTATTCAGGCCTTGGTTCAACACGGGTCTAAACTGTAGCTTTTGTCC 3048 consensus_12156#1 GGNCACCCCCCGTTTNTCCNGGCTTTGGTTCANCACGGGTTCT-----TAACCTTTACCC 349 * **** *** *** * * *** ******** ******* ** * *** ** consensus_12156#0 AATGGTCCATAACATCTAAGGAAAAACAAATTTTGGTCCATGGGAAAAAAAGATCTCAAT 3108 consensus_12156#1 CTGGGT------------------------------------------------------ 355 *** consensus_12156#0 ACATTTTTTA 3118 consensus_12156#1 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||