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Oryza sativa
cluster # 12160 cluster # 12160       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12160#0 length = 1413 sequences # 6  
consensus_12160#1 length = 678 sequences # 3  
consensus_12160#2 length = 396 sequences # 1  

consensusID : consensus_12160#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1413
fasta sequence
                              [GAGCGCTACAAAATGGCCCACGCCGCCGCGGCCACGGGCGCACTGGCACCGCTGCATCCACTGCTCCGCTGCACGAGCCGTCATCTCTGCGCCTCGGCTTCCCCTCGCGCCGGCCTCTGCCTCCACCACCACCGCCGCCGCCGCCGCAGCAGCCGGAGGACGAAACTCGCCGTGCGCGCGATGGCACCGACGTTGTCCTCGTCGTCGACGGCGGCGGCAGCTCCCCCGGGGCTGAAGGAGGGCATCGCGGGGCTCTACGACGAGTCGTCCGGCGTGTGGGAGAGCATCTGGGGCGAGCACATGCACCACGGCTTCTACGACGCCGGCGAGGCCGCCTCCATGTCCGACCACCGCCGCGCCCAGATCCGCATGATCGAGGAATCCCTCGCCTTCGCCGCCGTCCCCGATGATGCGGAGAAGAAACCCAAAAGTGTAGTTGATGTTGGCTGTGGCATTGGTGGTAGCTCAAGATACTTGGCGAACAAATACGGAGCGCAATGCTACGGCATCACGTTGAGTCCGGTGCAGGCTGAAAGAGGAAATGCCCTCGCGGCAGAGCAAGGGTTATCAGACAAGGTCTCCTTTCAAGTTGGTGATGCATTGGAGCAGCCTTTTCCTGATGGGCAGTTTGATCTTGTCTGGTCCATGGAGAGTGGCGAGCACATGCCAGACAAACGGCAGTTTGTAAGCGAGCTGGCACGCGTCGCAGCTCCTGGGGCGAGAATAATCATTGTGA-CCTGGTGCCATAGGAACCTCGAGCCATCCGAAGAGTCCCTGAAACCTGATGAGCTGAATCTCCTGAAAAGGATATGCGATGCATATTATCTCCCAGACTGGTGCTCTCCTTCTGATTATGTCAAAATTGCCGAGTCACTGTCTCTTGAGGATATAAGGACAGCTGATTGGTCAGAGAACGTCGCCCCATTCTGGCCTGCGGTTATAAAATCAGCATTGACATGGAAAGGTTTAACTTCTCTGCTAAGAAGTGGGTGGAAGACGATAAGAGGTGCAATGGTGATGCCTCTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTCACCATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGA-TTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAATGTGCACTCCAAATACGTCAAGAAATTCTTAGATCTTCAGACCAACTCGTCAGCTAGAGGTGGCTAAAAAGCTCATTTAGCTCCCTCGGTGCAAGATTGCTTTGATTGACCTAGTTTTCTTCTTAAAACTAAAACTATTTTA]

[+] EMBL AK071763             [GAGCGCTACAAAATGGCCCACGCCGCCGCGGCCACGGGCGCACTGGCACCGCTGCATCCACTGCTCCGCTGCACGAGCCGTCATCTCTGCGCCTCGGCTTCCCCTCGCGCCGGCCTCTGCCTCCACCACCACCGCCGCCGCCGCCGCAGCAGCCGGAGGACGAAACTCGCCGTGCGCGCGATGGCACCGACGCTGTCCTCGTCGTCGACGGCGGCGGCAGCTCCCCCGGGGCTGAAGGAGGGCATCGCGGGGCTCTACGACGAGTCGTCCGGCGTGTGGGAGAGCATCTGGGGCGAGCACATGCACCACGGCTTCTACGACGCCGGCGAGGCCGCCTCCATGTCCGACCACCGCCGCGCCCAGATCCGCATGATCGAGGAATCCCTCGCCTTCGCCGCCGTCCCCGATGATGCGGAGAAGAAACCCAAAAGTGTAGTTGATGTTGGCTGTGGCATTGGTGGTAGCTCAAGATACTTGGCGAACAAATACGGAGCGCAATGCTACGGCATCACGTTGAGTCCGGTGCAGGCTGAAAGAGGAAATGCCCTCGCGGCAGAGCAAGGGTTATCAGACAAGGTCTCCTTTCAAGTTGGTGATGCATTGGAGCAGCCTTTTCCTGATGGGCAGTTTGATCTTGTCTGGTCCATGGAGAGTGGCGAGCACATGCCAGACAAACGGCAGTTTGTAAGCGAGCTGGCACGCGTCGCAGCTCCTGGGGCGAGAATAATCATTGTGA CCTGGTGCCATAGGAACCTCGAGCCATCCGAAGAGTCCCTGAAACCTGATGAGCTGAATCTCCTGAAAAGGATATGCGATGCATATTATCTCCCAGACTGGTGCTCTCCTTCTGATTATGTCAAAATTGCCGAGTCACTGTCTCTTGAGGATATAAGGACAGCTGATTGGTCAGAGAACGTCGCCCCATTCTGGCCTGCGGTTATAAAATCAGCATTGACATGGAAAGGTTTAACTTCTCTGCTAAGAAGTGGGTGGAAGACGATAAGAGGTGCAATGGTGATGCCTCTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTCACCATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGA TTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAATGTGCACTCCAAATACGTCAAGAAATTCTTAGATCTTCAGACCAACTCGTCAGCTAGAGGTGGCTAAAAAGCTCATTTAGCTCCCTCGGTGCAAGATTGCTTTGATTGACCTAGTTTTCTTCTTAAAACTAAAACTATTTTA]
[+] EMBL AK061746             [ AGCGCTACAAAATGGCCCACGCCGCCGCGGCCACGGGCGCACTGGCACCGCTGCATCCACTGCTCCGCTGCACGAGCCGTCATCTCTGCGCCTCGGCTTCCCCTCGCGCCGGCCTCTGCCTCCACCACCACCGCCGCCGCCGCCGCAGCAGCCGGAGGACGAAACTCGCCGTGCGCGCGATGGCACCGACGTTGTCCTCGTCGTCGACGGCGGCGGCAGCTCCCCCGGGGCTGAAGGAGGGCATCGCGGGGCTCTACGACGAGTCGTCCGGCGTGTGGGAGAGCATCTGGGGCGAGCACATGCACCACGGCTTCTACGACGCCGGCGAGGCCGCCTCCATGTCCGACCACCGCCGCGCCCAGATCCGCATGATCGAGGAATCCCTCGCCTTCGCCGCCGTCCCCGATGATGCGGAGAAGAAACCCAAAAGTGTAGTTGATGTTGGCTGTGGCATTGGTGGTAGCTCAAGATACTTGGCGAACAAATACGGAGCGCAATGCTACGGCATCACGTTGAGTCCGGTGCAGGCTGAAAGAGGAAATGCCCTCGCGGCAGAGCAAGGGTTATCAGACAAGGTCTCCTTTCAAGTTGGTGATGCATTGGAGCAGCCTTTTCCTGATGGGCAGTTTGATCTTGTCTGGTCCATGGAGAGTGGCGAGCACATGCCAGACAAACGGCAGTTTGTAAGCGAGCTGGCACGCGTCGCAGCTCCTGGGGCGAGAATAATCATTGTGA CCTGGTGCCATAGGAACCTCGAGCCATCCGAAGAGTCCCTGAAACCTGATGAGCTGAATCTCCTGAAAAGGATATGCGATGCATATTATCTCCCAGACTGGTGCTCTCCTTCTGATTATGTCAAAATTGCCGAGTCACTGTCTCTTGAGGATATAAGGACAGCTGATTGGTCAGAGAACGTCGCCCCATTCTGGCCTGCGGTTATAAAATCAGCATTGACATGGAAAGGTTTAACTTCTCTGCTAAGAAGTGGGTGGAAGACGATAAGAGGTGCAATGGTGATGCCTCTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTCACCATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGA TTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAATGTGCACTCCAA                                                                                                                                  ]
[+] EMBL CB671350             [                         CCGCGGCCACTGGCGCACTGGCACCGCTGCATCCACTGCTCCGCTGCACGAGCCGTCATCTCTGCGCCTCGGCTTCCCCTCGCGCCGGCCTCTGCCTCCACCACCACCGCCGCCGCCGCCGCAGCAGCCGGAGGACGAAACTCGCCGTGCGCGCGATGGCACCGACGTTGTCCTCGTCGTCGACGGCGGCGGCAGCTCCCCCGGGGCTGAAGGAGGGCATCCCGGGGCTCTACGACGAGTCGACCGGCGTGTGGGAGAGCATCTGGGGCGAGCACATGCACCACGGCTTCAACAACGCCGGCGAGGCCGCCTCCATGTCCGACCACCGCCGCGCCCAGATACGCATGATCGAGGAATCCCTCGCCTTCGCCGCCGTCCCCGATGATGCGGAGAAGAAACCCAAAAGTGTACTTGATGTTGGCTGTGGCATTGGTGGTAGCTAAAGATACTTGGCGAACAAATACGGAGCGCAATGCTACCGCATCGCGTTGAGTCCGGTGCAGGCTGAAAGAGGAAATGCCCTCGCCGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB648997             [                                                           ACTGCCCTTCTGGACGAGCCGTCATCTCTGCGCCTCGGCTTCCCCTCGCGCCGGCCTCTGCCTCCACCACCACCGCCGCCGCCGCCGCAGCAGCCGGAGGACGAAACTCGCCGTGCGCGCGATGGCACCGACGTTGTCCTCGTCGTCGACGGCGGCGGCAGCTCCCCCGGGGCTGAAGGAGGGCATCGCGGGGCTCTACGACGAGTCGTCCGGCGTGTGGGAGAGCATCTGGGGCGAGCACATGCACCACGGCTTCTACGACGCCGGCGAGGCCGCCTCCATGTCCGACCACCGCCGCGCCCAGATCCGCATGATCGAGGAATCCCTCGCCTTCGCCGCCGTCCCCGATGATGCGGAGAAGAAACCCAAAAGTGTAGTTGATGTTGGCTGTGGCATTGGTGGTAGCTCAAGATACTTGGCGAACAAATACGGAGCGCAATGCTACGGCATCACGTTGAGTCCGGTGCAGGCTGAAAGAGGAAATGCCCTCGCGGCAGAGCAAGGGTTATCAGACAAGGTCTCCTTTCAAGTTGGTGATGCATTGGAGCAGCCTTTTCCTGATGGGCAGTTTGATCTTGTCTGGCCCATGGAGAGTGGCGAGCACATGCCAGACAAACGGCAGTTTGTAAGCGAGCTGGCACGCCTCCCAGCTCCTGGGGCGAGAATAATCATTGTGACCCTGGTGCCATACGAACCTCGAGCCATCCGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB671351             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGTCCGGTGCAGGCTGAAAGAGGAAATGCCCTCGCGGCAGAGCAAGGGTTATCAGACAAGGTCTCCTTTCAAGTTGGTGATGCATTGGAGCAGCCTTTTCCTGATGGGCAGTTTGATCTTGTCTGGTCCATGGAGAGTGGCGAGCACATGCCAGACAAACGGCAGTTTGTAAGCGAGCTGGCACGCGTCGCAGCTCCTGGGGCGAGAATAATCATTGTGA CCTGGTGCCATAGGAACCTCGAGCCATCCGAAGAGTCCCTGAAACCTGATGAGCTGAATCTCCTGAAAAGGATATGCGATGCATATTATCTCCCAGACTGGTGCTCTCCTTCTGATTATGTCAAAATTGCCGAGTCACTGTCTCTTGAGGATATAAGGACAGCTGATTGGTCAGAGAACGTCGCCCCATTCTGGCCTGCGGTTATAAAATCAGCATTGACATGGAAAGGTTTAACTTTTCTGCTAAGAAGTGGGTGGAAGACGATAAGAGGTGCAATGGTGATGCCTCTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTCACCATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGA TTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAAT                                                                                                                                             ]
[-] EMBL CB648998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTCTGAGTATGTCAAAATTGCCGAGTCACTGTCTCTTGAGGATATAAGGACAGGTGATTGGTCAGAGAACGTCGCCCCATTCTGCCCTGCGGTTATAAAATCAGCATTGACAGGGAAAGGTTTAACTTCTCTGGTAAGAAGTGGGTGGAAGACGATAAGAGGTGCAATGGTGATGCCTCTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTCACCATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGGGAGTTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTC                                                                                                                                                                                          ]


>consensus_12160#0 GAGCGCTACAAAATGGCCCACGCCGCCGCGGCCACGGGCGCACTGGCACCGCTGCATCCA CTGCTCCGCTGCACGAGCCGTCATCTCTGCGCCTCGGCTTCCCCTCGCGCCGGCCTCTGC CTCCACCACCACCGCCGCCGCCGCCGCAGCAGCCGGAGGACGAAACTCGCCGTGCGCGCG ATGGCACCGACGTTGTCCTCGTCGTCGACGGCGGCGGCAGCTCCCCCGGGGCTGAAGGAG GGCATCGCGGGGCTCTACGACGAGTCGTCCGGCGTGTGGGAGAGCATCTGGGGCGAGCAC ATGCACCACGGCTTCTACGACGCCGGCGAGGCCGCCTCCATGTCCGACCACCGCCGCGCC CAGATCCGCATGATCGAGGAATCCCTCGCCTTCGCCGCCGTCCCCGATGATGCGGAGAAG AAACCCAAAAGTGTAGTTGATGTTGGCTGTGGCATTGGTGGTAGCTCAAGATACTTGGCG AACAAATACGGAGCGCAATGCTACGGCATCACGTTGAGTCCGGTGCAGGCTGAAAGAGGA AATGCCCTCGCGGCAGAGCAAGGGTTATCAGACAAGGTCTCCTTTCAAGTTGGTGATGCA TTGGAGCAGCCTTTTCCTGATGGGCAGTTTGATCTTGTCTGGTCCATGGAGAGTGGCGAG CACATGCCAGACAAACGGCAGTTTGTAAGCGAGCTGGCACGCGTCGCAGCTCCTGGGGCG AGAATAATCATTGTGACCTGGTGCCATAGGAACCTCGAGCCATCCGAAGAGTCCCTGAAA CCTGATGAGCTGAATCTCCTGAAAAGGATATGCGATGCATATTATCTCCCAGACTGGTGC TCTCCTTCTGATTATGTCAAAATTGCCGAGTCACTGTCTCTTGAGGATATAAGGACAGCT GATTGGTCAGAGAACGTCGCCCCATTCTGGCCTGCGGTTATAAAATCAGCATTGACATGG AAAGGTTTAACTTCTCTGCTAAGAAGTGGGTGGAAGACGATAAGAGGTGCAATGGTGATG CCTCTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTCACCATCATCACCTGTCGC AAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCA TCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGATTTGTTGATTTGGG GAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAA ATATCCATGAATGTGCACTCCAAATACGTCAAGAAATTCTTAGATCTTCAGACCAACTCG TCAGCTAGAGGTGGCTAAAAAGCTCATTTAGCTCCCTCGGTGCAAGATTGCTTTGATTGA CCTAGTTTTCTTCTTAAAACTAAAACTATTTTA



consensusID : consensus_12160#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 678
fasta sequence
                              [CCCNNNGAGNNATNTTTTCNAANNCCCNNTNNTTTANACNNCANCCCCCTTTTCNGGGNNTTTANTTTCCCCCNAGGANNTCNGNNCNTCCNAAAAANGCANTTTACCTNNCCCCCCCCNTGGGGAANNCTTNGACTGTNCTGGACCTGGCCTCCGANGCCCTAACCTNTGNCTNNCCCNNNAAAGNTTTGGTNCANTTNCCCCCAGATGGGCCCCCNTCNAATATGNCAAAATTNCCGNNCATTTTCTTTGNGGNNTATAGGGNCACNTGNTTGTCCANAAACGTCCCCCCATTTTGGCNGCGGTTATAAAATCACCATTGGCCTGGAAAGGGTTTACCTTCNCTGCTTAGAANTGGGTGGAAGNCGATAAGAGNTGCAATGGTGATGCCTCTGATGATCGAAGGATCCAAGAAGGGGCTCATCAAATTCNCNATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGATTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAATGTGCACTCCAAATACGTCAAGAAAAAAAAAAAAAAAA]

[+] EMBL AU032697             [CCCNNNGAGNNATNTTTTCNAANNCCCNNTNNTTTANACNNCANCCCCCTTTTCNGGGNNTTTANTTTCCCCCNAGGANNTCNGNNCNTCCNAAAAANGCANTTTACCTNNCCCCCCCCNTGGGGAANNCTTNGACTGTNCTGGACCTGGCCTCCGANGCCCTAACCTNTGNCTNNCCCNNNAAAGNTTTGGTNCANTTNCCCCCAGATGGGCCCCCNTCNAATATGNCAAAATTNCCGNNCATTTTCTTTGNGGNNTATAGGGNCACNTGNTTGTCCANAAACGTCCCCCCATTTTGGCNGCGGTTATAAAATCACCATTGGCCTGGAAAGGGTTTACCTTCNCTGCTTAGAANTGGGTGGAAGNCGATAAGAGNTGCAATGGTGATGCCTCTGATGATCGAAGGATCCAAGAAGGGGCTCATCAAATTCNCNATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGATTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAATGTGCACTCCAAATACGTCAAGAAAAAAAAAAAAAAAA]
[-] EMBL CA759409             [                                                                                                                                                                                                                                                                                                                                                                             gaGACAAGGGGTGCAATGGTGATGCCTTTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTTACCATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATTTTTTCCATCACGAATAATGCAAATTTTGACGAGTTAGCACCTACTGATGGCGATTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTT AAAAAAAAATATCCATGAATGTGCCCTCCAAATTCGTCAAGAAAAAAAAAAAAAAAA]
[+] EMBL CB680548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGATTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAATGTGCA                                ]


>consensus_12160#1 CCCNNNGAGNNATNTTTTCNAANNCCCNNTNNTTTANACNNCANCCCCCTTTTCNGGGNN TTTANTTTCCCCCNAGGANNTCNGNNCNTCCNAAAAANGCANTTTACCTNNCCCCCCCCN TGGGGAANNCTTNGACTGTNCTGGACCTGGCCTCCGANGCCCTAACCTNTGNCTNNCCCN NNAAAGNTTTGGTNCANTTNCCCCCAGATGGGCCCCCNTCNAATATGNCAAAATTNCCGN NCATTTTCTTTGNGGNNTATAGGGNCACNTGNTTGTCCANAAACGTCCCCCCATTTTGGC NGCGGTTATAAAATCACCATTGGCCTGGAAAGGGTTTACCTTCNCTGCTTAGAANTGGGT GGAAGNCGATAAGAGNTGCAATGGTGATGCCTCTGATGATCGAAGGATCCAAGAAGGGGC TCATCAAATTCNCNATCATCACCTGTCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTA GTGAAATTACGCTCCTGCTATCTTCTCCATCACGAATAATGCAAATTCTGACGAGTTAGC ACCTACTGATGGCGATTTGTTGATTTGGGGAACAGCCAGTGCACTGTTACCACGTCATTG ATTTTGTACTCGTCAGACTTAAAAAAAAAATATCCATGAATGTGCACTCCAAATACGTCA AGAAAAAAAAAAAAAAAA



consensusID : consensus_12160#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 396
fasta sequence
                              [TCTGATAAGGTCAAAATTGCCGAGTCCCGTTTTCTTGAGGATAAAAGGCCAGCCGATTGGTCAGAAAACGTCGCCCCATTTTGGCCTGCGGTTATAAAATCACCATTGACATGGAAAGGTTTAACTTTTCTGCTAAAAAGTGGGTGGAAGACAATAAAAGGTGCAATGGTGAGCCCTTTGATGATCGAAGGAAACAAGAAAGGGTTCATCAAATTCCCCATCATCACCTGTCGCAAGCCTGAAACAACGCAGTAGTCCCCTAGTAGTGAAATTACGCTCCTGCTATTTTTTCCATCACGAATAATGCAAATTTTGACGAGTTAGCCCCTAATGATGGCGATTTGTTGATTTGGGGAACAGCCAGTGCCCTGTTCCCCCGTCATTGATTTTGTACTG]

[-] EMBL BI305578             [TCTGATAAGGTCAAAATTGCCGAGTCCCGTTTTCTTGAGGATAAAAGGCCAGCCGATTGGTCAGAAAACGTCGCCCCATTTTGGCCTGCGGTTATAAAATCACCATTGACATGGAAAGGTTTAACTTTTCTGCTAAAAAGTGGGTGGAAGACAATAAAAGGTGCAATGGTGAGCCCTTTGATGATCGAAGGAAACAAGAAAGGGTTCATCAAATTCCCCATCATCACCTGTCGCAAGCCTGAAACAACGCAGTAGTCCCCTAGTAGTGAAATTACGCTCCTGCTATTTTTTCCATCACGAATAATGCAAATTTTGACGAGTTAGCCCCTAATGATGGCGATTTGTTGATTTGGGGAACAGCCAGTGCCCTGTTCCCCCGTCATTGATTTTGTACTG]


>consensus_12160#2 TCTGATAAGGTCAAAATTGCCGAGTCCCGTTTTCTTGAGGATAAAAGGCCAGCCGATTGG TCAGAAAACGTCGCCCCATTTTGGCCTGCGGTTATAAAATCACCATTGACATGGAAAGGT TTAACTTTTCTGCTAAAAAGTGGGTGGAAGACAATAAAAGGTGCAATGGTGAGCCCTTTG ATGATCGAAGGAAACAAGAAAGGGTTCATCAAATTCCCCATCATCACCTGTCGCAAGCCT GAAACAACGCAGTAGTCCCCTAGTAGTGAAATTACGCTCCTGCTATTTTTTCCATCACGA ATAATGCAAATTTTGACGAGTTAGCCCCTAATGATGGCGATTTGTTGATTTGGGGAACAG CCAGTGCCCTGTTCCCCCGTCATTGATTTTGTACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12160#0      GAGCGCTACAAAATGGCCCACGCCGCCGCGGCCACGGGCGCACTGGCACCGCTGCATCCA 60
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      CTGCTCCGCTGCACGAGCCGTCATCTCTGCGCCTCGGCTTCCCCTCGCGCCGGCCTCTGC 120
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      CTCCACCACCACCGCCGCCGCCGCCGCAGCAGCCGGAGGACGAAACTCGCCGTGCGCGCG 180
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      ATGGCACCGACGTTGTCCTCGTCGTCGACGGCGGCGGCAGCTCCCCCGGGGCTGAAGGAG 240
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      GGCATCGCGGGGCTCTACGACGAGTCGTCCGGCGTGTGGGAGAGCATCTGGGGCGAGCAC 300
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      ATGCACCACGGCTTCTACGACGCCGGCGAGGCCGCCTCCATGTCCGACCACCGCCGCGCC 360
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      CAGATCCGCATGATCGAGGAATCCCTCGCCTTCGCCGCCGTCCCCGATGATGCGGAGAAG 420
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      AAACCCAAAAGTGTAGTTGATGTTGGCTGTGGCATTGGTGGTAGCTCAAGATACTTGGCG 480
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      AACAAATACGGAGCGCAATGCTACGGCATCACGTTGAGTCCGGTGCAGGCTGAAAGAGGA 540
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      AATGCCCTCGCGGCAGAGCAAGGGTTATCAGACAAGGTCTCCTTTCAAGTTGGTGATGCA 600
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      TTGGAGCAGCCTTTTCCTGATGGGCAGTTTGATCTTGTCTGGTCCATGGAGAGTGGCGAG 660
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      --------------------CCCNNNGAGNNATNTTTTCNAANNCCCNNTNNTTTAN-AC 39
                                                                                   

consensus_12160#0      CACATGCCAGACAAACGGCAGTTTGTAAGCGAGCTGGCACGCGTCGCAGCTCCTGGGGCG 720
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      NNCANCCCCCTTTTCNGGGNNTTTANTTTCCCCCNAGGANNT-CNGNNCNTCCNAAAAAN 98
                                                                                   

consensus_12160#0      AGAATAATCATTGTGACCTGGTGCCATAGGAACCTCGAGCCATCCGAAG---AGTCCCTG 777
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      GCANT--TTACCTNNCCCCCCCCNTGGGGAANNCTTNGACTGTNCTGGACCTGGCCTCCG 156
                                                                                   

consensus_12160#0      AAACCTGATGAGCTGAATCTCCTGAAAAGGATATGCGATGCATATTATCTCCCAGACTGG 837
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ANGCCCTAACCTNTGNCTNNCCCNNNAAAGNTTTG----GTNCANTTNCCCCCAGATGGG 212
                                                                                   

consensus_12160#0      TGCTCTCCTTCTGATTATGTCAAAATTGCCGAGTCACTGTCTCTTGAGGATATAAGGACA 897
consensus_12160#2      ---------TCTGATAAGGTCAAAATTGCCGAGTCCCGTTTTCTTGAGGATAAAAGGCCA 51
consensus_12160#1      ----CCCCCNTCNAATATGNCAAAATTNCCGNN-CATTTTCTTTGNGGNNTATAGGGNCA 267
                                    *  * * ******* ***   *    * * *   *  ** * ** **

consensus_12160#0      GCTGATTGGTCAGAGAACGTCGCCCCATTCTGGCCTGCGGTTATAAAATCAGCATTGACA 957
consensus_12160#2      GCCGATTGGTCAGAAAACGTCGCCCCATTTTGGCCTGCGGTTATAAAATCACCATTGACA 111
consensus_12160#1      CNTGNTTGTCCANA-AACGTCCCCCCATTTTGGCN-GCGGTTATAAAATCACCATTGGCC 325
                          * ***  ** * ****** ******* ****  *************** ***** * 

consensus_12160#0      TGGAAAGG-TTTAACTTCTCTGCTAAGAAGTGGGTGGAAGACGATAAGAGGTGCAATGGT 1016
consensus_12160#2      TGGAAAGG-TTTAACTTTTCTGCTAAAAAGTGGGTGGAAGACAATAAAAGGTGCAATGGT 170
consensus_12160#1      TGGAAAGGGTTTACCTTCNCTGCTTAGAANTGGGTGGAAGNCGATAAGAGNTGCAATGGT 385
                       ******** **** ***  ***** * ** ********** * **** ** *********

consensus_12160#0      GATGCCTCTGATGATCGAAGGATACAAGAAAGGGCTCATCAAATTCACCATCATCACCTG 1076
consensus_12160#2      GAGCCCTTTGATGATCGAAGGAAACAAGAAAGGGTTCATCAAATTCCCCATCATCACCTG 230
consensus_12160#1      GATGCCTCTGATGATCGAAGGATCCAAGAAGGGGCTCATCAAATTCNCNATCATCACCTG 445
                       **  *** **************  ****** *** *********** * ***********

consensus_12160#0      TCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTC 1136
consensus_12160#2      TCGCAAGCCTGAAACAACGCAGTAGTCCCCTAGTAGTGAAATTACGCTCCTGCTATTTTT 290
consensus_12160#1      TCGCAAGCCCGAAACAACGCAGTAGTACCCTAGTAGTGAAATTACGCTCCTGCTATCTTC 505
                       ********* **************** ***************************** ** 

consensus_12160#0      TCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGATTTGTTGATT 1196
consensus_12160#2      TCCATCACGAATAATGCAAATTTTGACGAGTTAGCCCCTAATGATGGCGATTTGTTGATT 350
consensus_12160#1      TCCATCACGAATAATGCAAATTCTGACGAGTTAGCACCTACTGATGGCGATTTGTTGATT 565
                       ********************** ************ **** *******************

consensus_12160#0      TGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAA 1256
consensus_12160#2      TGGGGAACAGCCAGTGCCCTGTTCCCCCGTCATTGATTTTGTACTG-------------- 396
consensus_12160#1      TGGGGAACAGCCAGTGCACTGTTACCACGTCATTGATTTTGTACTCGTCAGACTTAAAAA 625
                       ***************** ***** ** ******************               

consensus_12160#0      AAAAATATCCATGAATGTGCACTCCAAATACGTCAAGAAATTCTTAGATCTTCAGACCAA 1316
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      AAAAATATCCATGAATGTGCACTCCAAATACGTCAAGAAAAAAAAAAAAAAAA------- 678
                                                                                   

consensus_12160#0      CTCGTCAGCTAGAGGTGGCTAAAAAGCTCATTTAGCTCCCTCGGTGCAAGATTGCTTTGA 1376
consensus_12160#2      ------------------------------------------------------------
consensus_12160#1      ------------------------------------------------------------
                                                                                   

consensus_12160#0      TTGACCTAGTTTTCTTCTTAAAACTAAAACTATTTTA 1413
consensus_12160#2      -------------------------------------
consensus_12160#1      -------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)