These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12167#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1336 fasta sequence [AATCGTGGTTTCCCACTAGCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCGGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT-CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC-TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT-GGCGCCCGGCGCCCCGCG-CCGATATGCTGGGG-CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT-GCTTTGTGGACTGGCATTGGACCCAATGTTGCG-CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA-CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTTTTTTTTCTTTTCCGATTGGAATATGGCCTGGTTGGTTCTCTGTTGTCTACATCGTAAAATGTTGGTTNACTGGCAAAAAAA] [+] EMBL AK061318 [AATCGTGGTTTCCCACTAGCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCGGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCG ] [+] EMBL AK104090 [ TCGTGGTTTCCCACTAGCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCAGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACA ] [+] EMBL CA755708 [ GCAAGCGCAAGCGCAGGCGCAAACGCAAACGCCGCCGCCGGTATGCCGGAGCACGGGTCGAAGCCCGACATCTCCTTCGCCGGCCGCTTCACCGCAAGCGCCATCGCTGCATGCTTCGCTGAGGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCGGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTAGAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGGGCCTCCTCACC AGAAAATCGCTGCCGGCTTCACCACTGGTGCCATTGGGATCAGTATCGCCAACCCCACTTGACTTTGTC AGGGTAGGCTTCAAGGGGAAGGCCAGCTGGGGGCCCGGGGCCCCGGGCCCGATTGGCTGGGGCCCATGTATGCCCATGCCAAAATTGGTAGGCAGGAAGGGCTTGCTGGCTTTGTGGACTGGGTTGGGAACCAATGTTGCGCCGCAATGC ] [+] EMBL CB648044 [ CGCCGCCACCATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGTTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGTTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGTTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCATGTCCAGAACCTGTTTGTGAGGAAACCTGGTAG ] [+] EMBL CB648002 [ CGCCGCCCCTATCGCGCGCGAGGAAGGCGCCGCCGCTCTCTGGAAGGGCATCGTCCCGGGACTCCACCGCCAGTGCATCTACGGCGGCCTCCGCATCGGCCTCTACGAGCCCGTGAAATCCTTCTACGTTGGCAAAGACCATGTCGGGGATGTGCCT CTCACCAAGAAGATCGCTGCCGGCTTCACCACTGGTGCCATTGCGATCAGTATCGCCAACCCCAC TGACCTTGTCAAGGTTAGGCTTCAGGCGGAGGGCAAGCT GGCGCCCGGCGCCCCGCG CCGATATGCTGGGG CCATGGATGCCTATGCCAAGATTGTTAGGCAGGAAGGGTTTGCT GCTTTGTGGACTGGCATTGGACCCAATGTTGCG CGCAATGCCATCATCAATGCTGCCGAGTTGGCCAGCTATGATCAAGTCAAGCAGACTATTTTGAAGCTTCCTGGGCTCAAAGATGATGTGGTCACTCACCTCTTATCTGGTCTGGGCGCGGGCTTCTTCGCTGTCTGTGTTGGCTCTCCAGTGGATGTGGTCAAGTCAAGAATGATGGGTGACTCGGCCTACACAAGTACTATTGATTGGTTCGTGAAGACGCTGAAGAATGATGGACCTCTGGCATTTTACAAAGGCTTCCTCCCAAACTTTGCTAGACTGGGATCATGGAATGGGATAATGTTC ] [-] EMBL CB648045 [ ctTCTGGCATTTTACAAAGGCTTCGTCCCAAAGTTTGGTAGAGGGGGATCATGGAATGTGATAATGTTCTTGACACTGGAGCAGGTCCAGAAGGTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGAGGCGTACATTTTTTTTTTCTGAATCTTGTGTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGAGCCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAGCCTCTCA ] [+] EMBL OSS10640A [ TTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATNCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTT ] [+] EMBL AU065793 [ TTCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGNGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGCGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGNAGA ] [+] EMBL AU085992 [ TCTTGACACTGGAGCNGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTNGTTGANGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTCACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTNACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTTTTTTTTCTTTTCCGATTGGAATATGGCCTGGTTGGTTCTCTGTTGTCTACATCGTAAAATGTTGGTTNACTGGCAAAAAAA] [+] EMBL AU095734 [ TCTTGACACTGGAGCAGGTCCAGAAGCTGTTTGTGAGGAAACCTGGTAGTTGAAGATTATAACACATGGTTTTTGCCATCGTGGAAAAAGAGGATGCGTACATTTTTTTTTTCTTAATCTTCTCTTACACAAGAAGCAACGGTTAACATCCTCCCTGAGAATTGGGGAACAAGGAAGAAACTTGAATGCTCAATTGTGAGAACGCTGTTGAGTAATAAATCTTAGCGGGCCTTTGCATGA CCCCTGACAGAATTGGTGTAGTGCCTTTTTTTTGTGGAGAACCTCTCAATTTGTGGAAAATGATGAAAGATGAGCTGCAGAATTGAGCTCGGTTGAGACTTTTTTTTTCTTTTCCGATTGGAATATGGCCTGGTTGGTTCTCTGTTGTCTACATCGTAAAATGTTGGTTTACTGGCAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||