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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12172#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2158 fasta sequence
[TAGTCTATCCTCGCATCGCATACTCGTGCAACACGGCTTGCGAGCGGCGGCGCGGATGGGGCTCTGGGAGTGGCCGTGGGATCGCCGGCGGCGAGGCCCGTCGGGCTTAGGCCCCACCTCCACCGCCGAAGAGGTCACCGCCGGCGTAGACGCCACCCACCTCACCGCCATCGTCACAGGAGCGACGAACGGGATCGGGAGGGAGACGGCCCGAGTTCTGGCGAGGAGGGGGGCGGAGGTGATCATCCCGGCGAGGACGATGGAGAGCGGCAACGCGGTGAAGCAGAGCATCGCGGAGGAGGTCCCGGGGTCCAGGCTCCACGTCATGGAGATGGATCTCGCCTCGCTCGACTCCGTCCGCCGCTTCGCCACCGCGTTCGACTCCTCCCACACCCACCTCAACATCCTCATGTATGCCACACTCACTCACTCACTCACATGATTGCAGTTTGCAAAATGTTCAGAAGATGAACAGTTTCGTGCAGGGGAAACTCTTTTGGTAGCTGGGATATCAGTTCATTTATTGCATGTCAAATACTACCTCCATATTTTAATGTATGACGCCGTTCACTTTTCGACCAACGGACAAAAATACAGAGGGAGTAAATGGTTATGGAAAAAAAATCAAAACAATAAGATAGATTAGTACTTAATATATTATTTAAAAAATGCAAGTTTAAATTTGACTTTTACCGGTTGTTATAAAAAATAATAAATTTGACTGTAAATATGCATCTACTAGTTAGAGTTTAGTTCGTTATTTTCGTTACAATTTATAAAAATCAAATTTAAAATTGCGCGTTTGTGGAGTGATAAATTTTATTTATAACTATTTAGTTAACATGTAATAAATGGGTAGACGTCTAGCCGGGTGATTGAAATCCCTCTCCTTTGGTGCAGCACTTATCTGAAACTGAACTCCCTTACAAAAGTCTTTTTTTCTTTTGCTGTGCTTGTCTGAAGAAACAATGCAGGGATAATGGGGTGCCCTTTCAAGCTATCCAAGGATGGGATTGAGCTGCAGTTCGCAACGAATCATGTCGATGAAATCGACGGCTAGGAAGACCGGCGTGCAGGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGATCTGAACAAGCTAAACGATAAGTCTAGGTCAGCAATGTGTTCATTTTTATTGTTACCGCGTACATTATCACAATGTAAGTATCTAAAAGTATTGTTCTTGTCCTGTTCCGAAATTTATAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGGTACACATTTTTTTGGCCTTTTCTCGTTTATCTTGTTCATGATGATTGATGACTTTGATCGTTGAAGAAAGAATTAGAGTTTATGAGAATGTCGAAAAACCCGACTAGTAGTATTAGCAACAATTAAGACAAAATGTTAGTGCAAGCACAGTTGTTCAGTGCTTGTACTTGTGTGGTAGCTAACCCATTTGATTTACTCTTCATTTTTTAGTGATGAAATAACAGTGTGGATATATCACCCCTTGGGAAATAACAATCTTGATTCCATTCAGGAAGAAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTCGTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGAAGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGGATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAGACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTCGTGGAGAATTCAACAGACAAAAATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGACCATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTTCTATTTTTTATTTTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGTTTGTCAGTACTGTTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGCTTTTTTTGCCATTTCGTTTCA]
[+] EMBL AK065928 [TAGTCTATCCTCGCATCGCATACTCGTGCAACACGGCTTGCGAGCGGCGGCGCGGATGGGGCTCTGGGAGTGGCCGTGGGATCGCCGGCGGCGAGGCCCGTCGGGCTTAGGCCCCACCTCCACCGCCGAAGAGGTCACCGCCGGCGTAGACGCCACCCACCTCACCGCCATCGTCACAGGAGCGACGAACGGGATCGGGAGGGAGACGGCCCGAGTTCTGGCGAGGAGGGGGGCGGAGGTGATCATCCCGGCGAGGACGATGGAGAGCGGCAACGCGGTGAAGCAGAGCATCGCGGAGGAGGTCCCGGGGTCCAGGCTCCACGTCATGGAGATGGATCTCGCCTCGCTCGACTCCGTCCGCCGCTTCGCCACCGCGTTCGACTCCTCCCACACCCACCTCAACATCCTCATGTATGCCACACTCACTCACTCACTCACATGATTGCAGTTTGCAAAATGTTCAGAAGATGAACAGTTTCGTGCAGGGGAAACTCTTTTGGTAGCTGGGATATCAGTTCATTTATTGCATGTCAAATACTACCTCCATATTTTAATGTATGACGCCGTTCACTTTTCGACCAACGGACAAAAATACAGAGGGAGTAAATGGTTATGGAAAAAAAATCAAAACAATAAGATAGATTAGTACTTAATATATTATTTAAAAAATGCAAGTTTAAATTTGACTTTTACCGGTTGTTATAAAAAATAATAAATTTGACTGTAAATATGCATCTACTAGTTAGAGTTTAGTTCGTTATTTTCGTTACAATTTATAAAAATCAAATTTAAAATTGCGCGTTTGTGGAGTGATAAATTTTATTTATAACTATTTAGTTAACATGTAATAAATGGGTAGACGTCTAGCCGGGTGATTGAAATCCCTCTCCTTTGGTGCAGCACTTATCTGAAACTGAACTCCCTTACAAAAGTCTTTTTTTCTTTTGCTGTGCTTGTCTGAAGAAACAATGCAGGGATAATGGGGTGCCCTTTCAAGCTATCCAAGGATGGGATTGAGCTGCAGTTCGCAACGAATCATGTCGATGAAATCGACGGCTAGGAAGACCGGCGTGCAGGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGATCTGAACAAGCTAAACGATAAGTCTAGGTCAGCAATGTGTTCATTTTTATTGTTACCGCGTACATTATCACAATGTAAGTATCTAAAAGTATTGTTCTTGTCCTGTTCCGAAATTTATAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGGTACACATTTTTTTGGCCTTTTCTCGTTTATCTTGTTCATGATGATTGATGACTTTGATCGTTGAAGAAAGAATTAGAGTTTATGAGAATGTCGAAAAACCCGACTAGTAGTATTAGCAACAATTAAGACAAAATGTTAGTGCAAGCACAGTTGTTCAGTGCTTGTACTTGTGTGGTAGCTAACCCATTTGATTTACTCTTCATTTTTTAGTGATGAAATAACAGTGTGGATATATCACCCCTTGGGAAATAACAATCTTGATTCCATTCAGGAAGAAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTCGTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGAAGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGGATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAGACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTCGTGGAGAATTCAACAGACAAAAATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGACCATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTTCTATTTTTTATTTTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGTTTGTCAGTACTGTTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGC ]
[-] EMBL CB965301 [ AATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGACCATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTTCTATTTTTTATTTTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGTTTGTCAGTACTGTTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGCTTTTTTTGCCATTTCGTTTCA]
consensusID : consensus_12172#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1390 fasta sequence
[CTTCGGCTGCTGACCAGTTTGTAGTTCAGGAGAACAAGGAGGAGGAGGAATGGGGTTTAGCTGGGGATGGCTGTGTGGACGGCGCAATGGGCCATCGGGCTTCGGCGGGGCATCCACTGCCGACGAGGTCACCGCCGGCGTCGACGCCAGCCGCCTGACGGTCGTCGTCACAGGTGCAACAAATGGCATAGGAAAGGAGACAGCTAGGGTCCTTGCACTAAGGGGAGCAGAGGTGATCTTACCAGCAAGGACACTGGAGAGTGGCATGAAGGTGAAACAGAGCCTTGCAGAGGAAATCCCCAGCTCAAAGCTCCATGTCATGGAGATGGATCTTAGCTCCCTCGACTCCGTTCGCAGCTTCGCAAAATCGTTCAACTCGTCTTATAGGCATCTGAACGTCCTCATAAATAATGCAGGGGTAATGTCCTGCCCTTTTGGACTATCCAAAGATGGGATTGAGCTTCAATTTGCAACGAATCATGTTGGGCATTTCTTGCTGACAAATCTCCTTCTCGACAAGATGAAAGCCACGGCTAAAGAGACTGGTTTGCAGGGCAGGATCATAAACGTGTCTTCTATTTCGCATCGAGGAAGCGATGGTTCATGCTTTGATCTAGATAAGCTGAACGACAAGTCGAAGTACCGTCCGTTCAAGGCATATGGACATTCCAAATTAGCGAATATTCTCCATGCAAATGAACTATCCAGGCGTTTTCAGGAAGAAGGATGCAATCTGACTGCAAATTCCCTGCATCCTGGAGTAATCGCCACCAACCTCCCTCGCCACATCCTGACAAACAGTCTGATTATATCAATCTTCTCAGTCATGAAACCTTTTCTGAAGAGCATACCTCAGGGAGCTGCGACGAACTGTTATCTAGCATTGCATCCTGGATTGAAGGACGTGTCCGGCAAATACTTTGCCGACTGCAACGAAGCTACGCCGACGGCTGTTGCAAGAGATGCAGAGCTAGCAAAGAAGCTGTGGGAGTTCAGTGAAGAACTTACCAGTGGGGATCAGAAGCTGAAGGAGAAGTGAAGGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGAAGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAGGGATGCGACGCAATGGAAGTACGAAACCATGAAAGCAATGGCATCGGTTTTAGGCTAGACTGAATATGTCACTGAAAATTTTGCTTGTCCTAAGTATACTATTAGTATATGTCTTGTTCTAAACTTGTTCGGTTGTTCCTTTAGGCAAGACTGAATATGTCTTGTTCTAAACTATTAGCTATGTGAGTGTGACTATGTCATCCGATGACGATTGTACCCCTACATTCAGGGGCGAATCCACAGGGTATAACACTGTTCTAAACTTTATAATC]
[+] EMBL AK071972 [CTTCGGCTGCTGACCAGTTTGTAGTTCAGGAGAACAAGGAGGAGGAGGAATGGGGTTTAGCTGGGGATGGCTGTGTGGACGGCGCAATGGGCCATCGGGCTTCGGCGGGGCATCCACTGCCGACGAGGTCACCGCCGGCGTCGACGCCAGCCGCCTGACGGTCGTCGTCACAGGTGCAACAAATGGCATAGGAAAGGAGACAGCTAGGGTCCTTGCACTAAGGGGAGCAGAGGTGATCTTACCAGCAAGGACACTGGAGAGTGGCATGAAGGTGAAACAGAGCCTTGCAGAGGAAATCCCCAGCTCAAAGCTCCATGTCATGGAGATGGATCTTAGCTCCCTCGACTCCGTTCGCAGCTTCGCAAAATCGTTCAACTCGTCTTATAGGCATCTGAACGTCCTCATAAATAATGCAGGGGTAATGTCCTGCCCTTTTGGACTATCCAAAGATGGGATTGAGCTTCAATTTGCAACGAATCATGTTGGGCATTTCTTGCTGACAAATCTCCTTCTCGACAAGATGAAAGCCACGGCTAAAGAGACTGGTTTGCAGGGCAGGATCATAAACGTGTCTTCTATTTCGCATCGAGGAAGCGATGGTTCATGCTTTGATCTAGATAAGCTGAACGACAAGTCGAAGTACCGTCCGTTCAAGGCATATGGACATTCCAAATTAGCGAATATTCTCCATGCAAATGAACTATCCAGGCGTTTTCAGGAAGAAGGATGCAATCTGACTGCAAATTCCCTGCATCCTGGAGTAATCGCCACCAACCTCCCTCGCCACATCCTGACAAACAGTCTGATTATATCAATCTTCTCAGTCATGAAACCTTTTCTGAAGAGCATACCTCAGGGAGCTGCGACGAACTGTTATCTAGCATTGCATCCTGGATTGAAGGACGTGTCCGGCAAATACTTTGCCGACTGCAACGAAGCTACGCCGACGGCTGTTGCAAGAGATGCAGAGCTAGCAAAGAAGCTGTGGGAGTTCAGTGAAGAACTTACCAGTGGGGATCAGAAGCTGAAGGAGAAGTGAAGGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGAAGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAGGGATGCGACGCAATGGAAGTACGAAACCATGAAAGCAATGGCATCGGTTTTAGGCTAGACTGAATATGTCACTGAAAATTTTGCTTGTCCTAAGTATACTATTAGTATATGTCTTGTTCTAAACTTGTTCGGTTGTTCCTTTAGGCAAGACTGAATATGTCTTGTTCTAAACTATTAGCTATGTGAGTGTGACTATGTCATCCGATGACGATTGTACCCCTACATTCAGGGGCGAATCCACAGGGTATAACACTGTTCTAAACTTTATAATC]
consensusID : consensus_12172#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1222 fasta sequence
[GGCTTGCGAGCGGCGGCGCGGATGGGGCTCTGGGAGTGGCCGTGGGATCGCCGGCGGCGAGGCCCGTCGGGCTTAGGCCCCACCTCCACCGCCGAAGAGGTCACCGCCGGCGTAGACGCCACCCACCTCACCGCCATCGTCACAGGAGCGACGAACGGGATCGGGAGGGAGACGGCCCGAGTTCTGGCGAGGAGGGGGGCGGAGGTGATCATCCCGGCGAGGACGATGGAGAGCGGCAACGCGGTGAAGCAGAGCATCGCGGAGGAGGTCCCGGGGTCCAGGCTCCACGTCATGGAGATGGATCTCGCCTCGCTCGACTCCGTCCGCCGCTTCGCCACCGCGTTCGACTCCTCCCACACCCACCTCAACATCCTCATAAACAATGCAGGGATAATGGGGTGCCCTTTCAAGCTATCCAAGGATGGGATTGAGCTGCAGTTCGCAACGAATCATGTCGGTCATTTCTTGCTTACAAATCTTCTGCTCGACAAGATGAAATCGACGGCTAGGAAGACCGGCGTGCAGGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGATCTGAACAAGCTAAACGATAAGTCTAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGGAAGAAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTCGTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGAAGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGGATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAGACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTCGTGGAGAATTCAACAGACAAAAATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGACCATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTT-CTATTTTTTATTTTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGTTTGTCAGTACT-GTTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGCT]
[+] EMBL AK062546 [GGCTTGCGAGCGGCGGCGCGGATGGGGCTCTGGGAGTGGCCGTGGGATCGCCGGCGGCGAGGCCCGTCGGGCTTAGGCCCCACCTCCACCGCCGAAGAGGTCACCGCCGGCGTAGACGCCACCCACCTCACCGCCATCGTCACAGGAGCGACGAACGGGATCGGGAGGGAGACGGCCCGAGTTCTGGCGAGGAGGGGGGCGGAGGTGATCATCCCGGCGAGGACGATGGAGAGCGGCAACGCGGTGAAGCAGAGCATCGCGGAGGAGGTCCCGGGGTCCAGGCTCCACGTCATGGAGATGGATCTCGCCTCGCTCGACTCCGTCCGCCGCTTCGCCACCGCGTTCGACTCCTCCCACACCCACCTCAACATCCTCATAAACAATGCAGGGATAATGGGGTGCCCTTTCAAGCTATCCAAGGATGGGATTGAGCTGCAGTTCGCAACGAATCATGTCGGTCATTTCTTGCTTACAAATCTTCTGCTCGACAAGATGAAATCGACGGCTAGGAAGACCGGCGTGCAGGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGATCTGAACAAGCTAAACGATAAGTCTAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGGAAGAAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTCGTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGAAGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGGATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAGACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTCGTGGAGAATTCAACAGACAAAAATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGACCATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTT CTATTTTTTATTTTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGTTTGTCAGTACT GTTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGC ]
[+] EMBL CF196072 [ GGCTCCACGTCATGGAGATGGATCTCGCCTCGCTCGACTCCGTCCGCCGCTTCGCCACCGCGTTCGACTCCTCCCACACCCACCTCAACATCCTCATAAACAATGCAGGGATAATGGGGTGCCCTTTCAAGCTATCCAAGGATGGGATTGAGCTGCAGTTCGCAACGAATCATGTCGGTCATTTCTTGCTTACAAATCTTCTGCTCGACAAGATGAAATCGACGGCTAGGAAGACCGGCGTGCAGGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGATCTGAACAAGCTAAACGATAAGTCTAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGNAAGNNNGATGTAATTTGACTGCAAATTCCCTGCATCCTNNNNNGATCCTCACCAATATCACTCGTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTG ANNNCACACAACAGNNNNNTGCNNNNNCATGCTATCTGGCACTGCATnntgnnct ]
[+] EMBL CA766142 [ GGGGTGCCCTTT AAGCTATCCAAGGATGGGATTGAGCTGCAGTTCGCAACGAATCATGTCGGTCATTTCTTGCTTACAAATCTTCTGCTCGACAAGATGAAATCGACGGCTAGGAAGACCGGCGTGCAGGGCAGGATCGTGAGCGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGATCTGAACAAGCTAAACGATAAGTCTAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGGAAGAAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTCGTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGAAGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGGATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAGACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTCGTGGAGAATTCAACAGACAAAAATGACACTGNTTAGACTGTCTGAAATTCTGAACCTGACCATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTAATTTTTATTTCCTA TTTTTAATTTTTTTCAATGGNATGATACAGCTTATATAATATGACCATAGAGCTGNTTGGCAGTACTGGTGGTTGGCATGn ]
[+] EMBL CB096286 [ CTAGGAAGACCGGCGTGCAGGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGATCTGAACAAGCTAAACGATAAGTCTAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGGAAGAAGGTTGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTCGTTATGTCGTCACAAGCAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGAAGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGGATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAGACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTCGTGGAGAATTCAACAGACAAAAATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGACCATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTT CTATTTTTTATTTTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGNTTGTCAGTACT GGTGNTTGC ]
[-] EMBL CB630580 [ GATCTGAACAAGCTAAACGATAAGTCTAGGTACAAACCACTCATTGCATATGCACATTCCAAATTAGCTAATATTCTTCATGCAAATGAGCTAGCAAAGCGTTTTCAGGAAGAAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCCCCAATATCACTCGTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTTTGAAGAACACCCACCAGGGAGCTGCACCCCCATGTTATTTGGCACTGCATCCTGAACTGAAGGATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAGACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATATTAATCGTCGTGGAGAATTCACCAGACAAAAATGCCCCTGTTTAGACTGTCTGAAATTTTGACCCTGCCCATGTCTCACCCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTT CTATTTTTTATTTTTTTTCAATGGAATGATCCAGCTTATATAATATGCCCATAGAGCTGTTTGTCAGTACT GTTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGCT]
consensusID : consensus_12172#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence
[CACNGCGGGGGTGGACGCCAGCCGCCTGACAGTTGTCGTCACAGGTGCAACAAATGGCATAGGAAAGGAGACAGCTAGGGTCCTTGCACTAAGGGGAGCAGAGGTGATCTTACCAGCAAGGACACTGGAGAGTGGCATGAAGGTGAAACAGAGCCTTGCAGAGGAAATCCCCAGCTCAAAGCTCCATGTCATGGAGATGGATCTTAGCTCCCTCGACTCCGTTCGCAGCTCCGCAAAATCGTTCAACTCGTCTTATAGGCATCTGAACGTCCTCATAAATAATGCAGGGGTAATGTCCTGCCCTTTTGGACTATCCAAAGATGGGATTGAGCTTCAATTTGCAACGAATCATGTTGGGCATTTCTTGCTGACAAATCTCCTTCTCGACAAGATGAAAGCCACGGCTAAAGAGACTGGTTTGCAGGGCAGGATCATAAACGTGTCTTCTATTTCGCATCGAGGAAGCGATGGTTCATGCTTTGATCTAGATAAGCTGAACGACAAGTCGAAGTTAGTAATTTGCATTTGTGTTCTTCAGGCTGACTCAGTACAGCAAATTGAACCAACGTTCTTACTATTTTATAAAACTAGGAAAGTAGCCCGCGTATACGCGGACATGTTGTGTTCAAGAAATTTATAAGATTGGAATATTAACCAGACAGTATATGCTACGCTTCAAATTTCAAAAAAA]
[-] EMBL CA759800 [CACNGCGGGGGTGGACGCCAGCCGCCTGACAGTTGTCGTCACAGGTGCAACAAATGGCATAGGAAAGGAGACAGCTAGGGTCCTTGCACTAAGGGGAGCAGAGGTGATCTTACCAGCAAGGACACTGGAGAGTGGCATGAAGGTGAAACAGAGCCTTGCAGAGGAAATCCCCAGCTCAAAGCTCCATGTCATGGAGATGGATCTTAGCTCCCTCGACTCCGTTCGCAGCTCCGCAAAATCGTTCAACTCGTCTTATAGGCATCTGAACGTCCTCATAAATAATGCAGGGGTAATGTCCTGCCCTTTTGGACTATCCAAAGATGGGATTGAGCTTCAATTTGCAACGAATCATGTTGGGCATTTCTTGCTGACAAATCTCCTTCTCGACAAGATGAAAGCCACGGCTAAAGAGACTGGTTTGCAGGGCAGGATCATAAACGTGTCTTCTATTTCGCATCGAGGAAGCGATGGTTCATGCTTTGATCTAGATAAGCTGAACGACAAGTCGAAGTTAGTAATTTGCATTTGTGTTCTTCAGGCTGACTCAGTACAGCAAATTGAACCAACGTTCTTACTATTTTATAAAACTAGGAAAGTAGCCCGCGTATACGCGGACATGTTGTGTTCAAGAAATTTATAAGATTGGAATATTAACCAGACAGTATATGCTACGCTTCAAATTTCAAAAAAA]
consensusID : consensus_12172#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 643 fasta sequence
[GGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGAAGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAGGGATGCGACGAGCTGTTATCTAGCATTGCATCCTGGATTGAAGGACGTGTCCGGCAAATACTTTGCCGACTGCAACGAAGCTACGCCGACGGCTGTTGCAAGAGATGCAGAGCTAGCAAAGAAGCTGTGGGAGTTCAGTGAAGAACTTACCAGTGGAGATCAGAAGCTGAAGGAGAAGTGAAGGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGAAGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAGGGATGCGACGCAATGGAAGTACGAAACCATGAAAGCAATGGCATCGGTTTTAGGCTAGACTGAATATGTCACTGAAAATTTTGCTTGTCCTAAGTATACTATTAGTATATGTCTTGTTCTAAACTTGTTCGGTTGTTCCTTTAGGCAAGACTGAATATGTCTTGTTCTAAACTATTAGCTATGTGAGTGTGACTATGTCATCCGATGACGATTGTACCCCCTACATTCAGGGGCGAATCCACAGGGTATAACACTGTTCTAAACTTTATAATCCCATTGGTGNTAGCTCATGTTAGCACGTAAAA]
[+] EMBL CA765965 [GGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGAAGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAGGGATGCGACGAGCTGTTATCTAGCATTGCATCCTGGATTGAAGGACGTGTCCGGCAAATACTTTGCCGACTGCAACGAAGCTACGCCGACGGCTGTTGCAAGAGATGCAGAGCTAGCAAAGAAGCTGTGGGAGTTCAGTGAAGAACTTACCAGTGGAGATCAGAAGCTGAAGGAGAAGTGAAGGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGAAGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAGGGATGCGACGCAATGGAAGTACGAAACCATGAAAGCAATGGCATCGGTTTTAGGCTAGACTGAATATGTCACTGAAAATTTTGCTTGTCCTAAGTATACTATTAGTATATGTCTTGTTCTAAACTTGTTCGGTTGTTCCTTTAGGCAAGACTGAATATGTCTTGTTCTAAACTATTAGCTATGTGAGTGTGACTATGTCATCCGATGACGATTGTACCCCCTACATTCAGGGGCGAATCCACAGGGTATAACACTGTTCTAAACTTTATAATCCCATTGGTGNTAGCTCATGTTAGCACGTAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12172#1 CTTCGGCTGCTGACCAGTTTGTAGTTCAGGAGAACAAGGAGGAGGAGGAATGGGGTTTAG 60
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 CTGGGGATGGCTGTGTGGACGGCGCAATGGGCCATCGGGCTTCGGCGGGGCATCCACTGC 120
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 CGACGAGGTCACCGCCGGCGTCGACGCCAGCCGCCTGACGGTCGTCGTCACAGGTGCAAC 180
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 AAATGGCATAGGAAAGGAGACAGCTAGGGTCCTTGCACTAAGGGGAGCAGAGGTGATCTT 240
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ACCAGCAAGGACACTGGAGAGTGGCATGAAGGTGAAACAGAGCCTTGCAGAGGAAATCCC 300
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 CAGCTCAAAGCTCCATGTCATGGAGATGGATCTTAGCTCCCTCGACTCCGTTCGCAGCTT 360
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 CGCAAAATCGTTCAACTCGTCTTATAGGCATCTGAACGTCCTCATAAATAATGCAGGGGT 420
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 AATGTCCTGCCCTTTTGGACTATCCAAAGATGGGATTGAGCTTCAATTTGCAACGAATCA 480
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 TGTTGGGCATTTCTTGCTGACAAATCTCCTTCTCGACAAGATGAAAGCCACGGCTAAAGA 540
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 GACTGGTTTGCAGGGCAGGATCATAAACGTGTCTTCTATTTCGCATCGAGGAAGCGATGG 600
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 TTCATGCTTTGATCTAGATAAGCTGAACGACAAGTCGAAGTACCGTCCGTTCAAGGCATA 660
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 TGGACATTCCAAATTAGCGAATATTCTCCATGCAAATGAACTATCCAGGCGTTTTCAGGA 720
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ------------------------------------------------------------
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 AGAAGGATGCAATCTGACTGCAAATTCCCTGCATCCTGGAGTAATCGCCACCAACCTCCC 780
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ---------------------------------------------TAGTCTATCCTCGCA 15
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 TCGCCACATCCTGACAAACAGTCTGATTATATCAATCTTCTCAGT-CATGAAACCTTTTC 839
consensus_12172#4 -GGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGAAGGAGCGCAGTGCGCAGAGTT 59
consensus_12172#0 TCGCATACTCGTGCAACACGGCTTGCGAGCGGCGGCGCGGATGGGGCTCTGGG-AGTGGC 74
consensus_12172#2 -------------------GGCTTGCGAGCGGCGGCGCGGATGGGGCTCTGGG-AGTGGC 40
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 TGAAGAGCATACCTCAGGGAGCTGCGACGAACTGTTATCTAGCATTGCATCCTGGATTGA 899
consensus_12172#4 TGGTGGACTGGAGCTGGAGGGATGCGACGAGCTGTTATCTAGCATTGCATCCTGGATTGA 119
consensus_12172#0 CGTGGGATCGCCGGCGGCGAGGCCCGTCGGGCTTAGGCCCCACCTCCACCGCCGAA---G 131
consensus_12172#2 CGTGGGATCGCCGGCGGCGAGGCCCGTCGGGCTTAGGCCCCACCTCCACCGCCGAA---G 97
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 AGGACGTGTCCGGCAAATACTTTGCCGACTGCAACGAAGCTACGCCGACGGCTGTTGCAA 959
consensus_12172#4 AGGACGTGTCCGGCAAATACTTTGCCGACTGCAACGAAGCTACGCCGACGGCTGTTGCAA 179
consensus_12172#0 AGGTCACCGCCGGCGTAGAC---GCCACCCACCTCACCGCCATCGTCACAGGAGCGACGA 188
consensus_12172#2 AGGTCACCGCCGGCGTAGAC---GCCACCCACCTCACCGCCATCGTCACAGGAGCGACGA 154
consensus_12172#3 ----CACNGCGGGGGTGGAC---GCCAGCCGCCTGACAGTTGTCGTCACAGGTGCAACAA 53
* * ** ** *** * * * ** * * * *
consensus_12172#1 GAGATGCAGAGCTAGCAAAGAAGCTGTGGGAGTTC-AGTGAAGAACTTACCAGTGGGGAT 1018
consensus_12172#4 GAGATGCAGAGCTAGCAAAGAAGCTGTGGGAGTTC-AGTGAAGAACTTACCAGTGGAGAT 238
consensus_12172#0 ACGGGATCGGG-----AGGGAGACGGCCCGAGTTCTGGCGAGGAGGGGGGCGGAGGTGAT 243
consensus_12172#2 ACGGGATCGGG-----AGGGAGACGGCCCGAGTTCTGGCGAGGAGGGGGGCGGAGGTGAT 209
consensus_12172#3 ATGGCATAGGA-----AAGGAGACAGCTAGGGTCCTTGCACTAAGGGGAGCAGAGGTGAT 108
* * * ** * * * ** * * * * * ** ***
consensus_12172#1 CAGAAGCTGAAGGAGAAGTGAAGGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGA 1078
consensus_12172#4 CAGAAGCTGAAGGAGAAGTGAAGGTAGCGACCTGAACCTGAAGTCGGCGGCGACATTGGA 298
consensus_12172#0 CATCCCGGCGAGGACGATGGAGAGCGGCAACGCGG---TGAAGCAGA--GCATCGC-GGA 297
consensus_12172#2 CATCCCGGCGAGGACGATGGAGAGCGGCAACGCGG---TGAAGCAGA--GCATCGC-GGA 263
consensus_12172#3 CTTACCAGCAAGGACACTGGAGAGTGGCATGAAGG---TGAAACAGA--GCCTTGC-AGA 162
* **** ** * ** * **** * ** **
consensus_12172#1 AGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAG--GGATGCGACGCAATGGAA 1136
consensus_12172#4 AGGAGCGCAGTGCGCAGAGTTTGGTGGACTGGAGCTGGAG--GGATGCGACGCAATGGAA 356
consensus_12172#0 GGAGGTCCCGGGGTCCAGGCTCCACGTCATGGAGATGGATCTCGCCTCGCTCGACTCCGT 357
consensus_12172#2 GGAGGTCCCGGGGTCCAGGCTCCACGTCATGGAGATGGATCTCGCCTCGCTCGACTCCGT 323
consensus_12172#3 GGAAATCCCCAGCTCAAAGCTCCATGTCATGGAGATGGATCTTAGCTCCCTCGACTCCGT 222
* * * * * * * ***** **** * * *
consensus_12172#1 GTACGAAACCATGAAAGCAATGGCATCGGTTTTAGGCTAGACTGAATATGTCACTGAAAA 1196
consensus_12172#4 GTACGAAACCATGAAAGCAATGGCATCGGTTTTAGGCTAGACTGAATATGTCACTGAAAA 416
consensus_12172#0 CCGCCGCTTCGCCACCGCGTTCGACTCC-TCCCACACCCACCTCAACATCCTCATGTATG 416
consensus_12172#2 CCGCCGCTTCGCCACCGCGTTCGACTCC-TCCCACACCCACCTCAACATCCTCATA---- 378
consensus_12172#3 TCGCAGCTCCGCAAAATCGTTCAACTCG-TCTTATAGGCATCTGAACGTCCTCATA---- 277
* * * * * ** * * ** ** * *
consensus_12172#1 TTTTGCTTGTCCTAAGTATACTATTAGTATATGTCTTGTTCTAAACTTGTTCGGTTGTTC 1256
consensus_12172#4 TTTTGCTTGTCCTAAGTATACTATTAGTATATGTCTTGTTCTAAACTTGTTCGGTTGTTC 476
consensus_12172#0 CCACACTCACTCACTCACTCACATGATTGCAGTTTGCAAAATGTTCAGAAGATG-AACAG 475
consensus_12172#2 -------------------------------------------------------AACA- 382
consensus_12172#3 -------------------------------------------------------AATA- 281
consensus_12172#1 CTTTAGGCAAGACTGAATATGTCTTGTTCTAAACTATTAGCTATGTGAGTGTGACT---A 1313
consensus_12172#4 CTTTAGGCAAGACTGAATATGTCTTGTTCTAAACTATTAGCTATGTGAGTGTGACT---A 533
consensus_12172#0 TTTCGTGCAGGGGAAACTCTTTTGGTAGCTGGGATATCAGTTCATTTATTGCATGTCAAA 535
consensus_12172#2 ----ATGCAGGGATAA-------------TGGGGTGCCCTTTCAA--------------- 410
consensus_12172#3 ----ATGCAGGGGTAA-------------TGTCCTGCCCTTTTGG--------------- 309
*** * * * * *
consensus_12172#1 TGTCATCCGATGACGATTGTACCCC-TACATTCAGGGGCGAATCCACAGGGTATAACACT 1372
consensus_12172#4 TGTCATCCGATGACGATTGTACCCCCTACATTCAGGGGCGAATCCACAGGGTATAACACT 593
consensus_12172#0 TACTACCTCCATATTTTAATGTATGACGCCGTTCACTTTTCGACCAACGGACAAAAATAC 595
consensus_12172#2 -GCTATCC---------------------------------------------------- 417
consensus_12172#3 -ACTATCC---------------------------------------------------- 316
* *
consensus_12172#1 GTTCTAAACTTTATAATC------------------------------------------ 1390
consensus_12172#4 GTTCTAAACTTTATAATCCCATTGGTGNTAGCTCATGTTAGCACGTAAAA---------- 643
consensus_12172#0 AGAGGGAGTAAATGGTTATGGAAAAAAAATCAAAACAATAAGATAGATTAGTACTTAATA 655
consensus_12172#2 ---------------------------------AAGGATGGGATTGA------------- 431
consensus_12172#3 ---------------------------------AAAGATGGGATTGA------------- 330
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 TATTATTTAAAAAATGCAAGTTTAAATTTGACTTTTACCGGTTGTTATAAAAAATAATAA 715
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ATTTGACTGTAAATATGCATCTACTAGTTAGAGTTTAGTTCGTTATTTTCGTTACAATTT 775
consensus_12172#2 --------------------------------------------------GCTGCAGTTC 441
consensus_12172#3 --------------------------------------------------GCTTCAATTT 340
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ATAAAAATCAAATTTAAAATTGCGCGTTTGTGGAGTGATAAATTTTATTTATAACTATTT 835
consensus_12172#2 GCAA----CGAAT----------------------------------------------- 450
consensus_12172#3 GCAA----CGAAT----------------------------------------------- 349
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 AGTTAACATGTAATAAATGGGTAGACGTCTAGCCGGGTGATTGAAATCCCTCTCCTTTGG 895
consensus_12172#2 ------CATGT------------------------------------------------- 455
consensus_12172#3 ------CATGT------------------------------------------------- 354
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 TGCAGCACTTATCTGAAACTGAACTCCCTTACAAAAGTCTTTTTTTCTTTTGCTGTGCTT 955
consensus_12172#2 -----CGGTCATTT---------CTTGCTTACAAA----------TCTTCTGCT------ 485
consensus_12172#3 -----TGGGCATTT---------CTTGCTGACAAA----------TCTCCTTCT------ 384
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 GTCTGAAGAAACAATGCAGGGATAATGGGGTGCCCTTTCAAGCTATCCAAGGATGGGATT 1015
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 GAGCTGCAGTTCGCAACGAATCATGTCGATGAAATCGACGGCTAGGAAGACCGGCGTGCA 1075
consensus_12172#2 -------------CGACAA--------GATGAAATCGACGGCTAGGAAGACCGGCGTGCA 524
consensus_12172#3 -------------CGACAA--------GATGAAAGCCACGGCTAAAGAGACTGGTTTGCA 423
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 GGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGA 1135
consensus_12172#2 GGGCAGGATCGTGAACGTATCGTCTATTGCGCACAAGAGAAGTGATGGTTCTTGCTTTGA 584
consensus_12172#3 GGGCAGGATCATAAACGTGTCTTCTATTTCGCATCGAGGAAGCGATGGTTCATGCTTTGA 483
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 TCTGAACAAGCTAAACGATAAGTCTAGGTCAGCAATGTGTTCATTTTTATTGTTACCGCG 1195
consensus_12172#2 TCTGAACAAGCTAAACGATAAGTCTAGGT------------------------------- 613
consensus_12172#3 TCTAGATAAGCTGAACGACAAGTCGAAGTTAGTAATTTGCATTTGTGTTCTTCAGGCTGA 543
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 TACATTATCACAATGTAAGTATCTAAAAGTATTGTTCTTGTCCTGTTCCGAAATTTATAG 1255
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 CTCAGTACAGCAAATTGAACCAACGTTCTTACTATT-TTATAAAACTAGGAAAGTAGCCC 602
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 GTACAAAC-CACTCATTGCATATGCACATTCCAAATTAGCT---AATATTCTTCATGCAA 1311
consensus_12172#2 --ACAAAC-CACTCATTGCATATGCACATTCCAAATTAGCT---AATATTCTTCATGCAA 667
consensus_12172#3 GCGTATACGCGGACATGTTGTGTTCAAGAAATTTATAAGATTGGAATATTAACCAGACAG 662
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 -ATGAGCTAGCAAAGCGTTTTCAGGTACACATTTTTTTGGCCTTTTCTCGTTTATCTTGT 1370
consensus_12172#2 -ATGAGCTAGCAAAGCGTTTTCAGG----------------------------------- 691
consensus_12172#3 TATATGCTACGCTTCAAATTTCAAAAAAA------------------------------- 691
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 TCATGATGATTGATGACTTTGATCGTTGAAGAAAGAATTAGAGTTTATGAGAATGTCGAA 1430
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 AAACCCGACTAGTAGTATTAGCAACAATTAAGACAAAATGTTAGTGCAAGCACAGTTGTT 1490
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 CAGTGCTTGTACTTGTGTGGTAGCTAACCCATTTGATTTACTCTTCATTTTTTAGTGATG 1550
consensus_12172#2 ------------------------------------------------------------
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 AAATAACAGTGTGGATATATCACCCCTTGGGAAATAACAATCTTGATTCCATTCAGGAAG 1610
consensus_12172#2 ---------------------------------------------------------AAG 694
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 AAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTC 1670
consensus_12172#2 AAGGATGTAATTTGACTGCAAATTCCCTGCATCCTGGAGTGATCCTCACCAATATCACTC 754
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 GTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGA 1730
consensus_12172#2 GTTATGTCGTCACAAACAGCGTGATGGTTTCAATCCTTTCTGTGGGAAACCTCTTTCTGA 814
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 AGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGG 1790
consensus_12172#2 AGAACACACAACAGGGAGCTGCAACCACATGCTATCTGGCACTGCATCCTGAACTGAAGG 874
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAG 1850
consensus_12172#2 ATGTCTCCGGCAAATACTTCGCGGACTGCAAGGAAGCCACGCCGAGGCCTGCTGCGAGAG 934
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 ACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTC 1910
consensus_12172#2 ACGCAGAGCTAGCGAAGAGGCTATGGGATTTCAGCGAACAGCTCGTGGATACTAATCGTC 994
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 GTGGAGAATTCAACAGACAAAAATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGAC 1970
consensus_12172#2 GTGGAGAATTCAACAGACAAAAATGACACTGTTTAGACTGTCTGAAATTCTGAACCTGAC 1054
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 CATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTTCTATTTTTTATT 2030
consensus_12172#2 CATGTCTCAACCTGAGATCCTTCAGATACAGAATTTTATTTTTTATTTCTATTTTTTATT 1114
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 TTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGTTTGTCAGTACTG 2090
consensus_12172#2 TTTTTTCAATGGAATGATACAGCTTATATAATATGACCATAGAGCTGTTTGTCAGTACTG 1174
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 ------------------------------------------------------------
consensus_12172#4 ------------------------------------------------------------
consensus_12172#0 TTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGCTTTTTTTGCCATT 2150
consensus_12172#2 TTGTTTGCATGTGTAAACAAATTCAAATGCATTAATAATCAGCCTGCT------------ 1222
consensus_12172#3 ------------------------------------------------------------
consensus_12172#1 --------
consensus_12172#4 --------
consensus_12172#0 TCGTTTCA 2158
consensus_12172#2 --------
consensus_12172#3 --------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||