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Oryza sativa
cluster # 12173 cluster # 12173       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12173#0 length = 1314 sequences # 7  
consensus_12173#1 length = 547 sequences # 2  
consensus_12173#2 length = 440 sequences # 1  

consensusID : consensus_12173#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1314
fasta sequence
                              [TGGACTGAAGGAGTAGAAAATCTCATCTCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAAT---GGGCCAAATTGCTTACGCAAATATTGATCCATATTACGGAAGCCTTTATGCAGCTTATGGTGGACAGCCTATGATGCATCCACCATTGGTCGGGATGCATCCAGCTGGACTACCACTGCCTACCGATGCAATTGAAGAGCCTGTCTATGTTAATGCAAAACAGTACAATGCCATATTAAGGCGTCGACAATCTCGAGCCAAAGCTGAGTCTGAAAAGAAGCTTGTCAAGGGCCGTAAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGTTCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCGTCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAAACGGGATTTAAACACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTACATGCTAGTGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGGGCAACAGATTTTGCAGCCTTTGGTTCGGTCTGCTCAGTTTCTTTACCTTCTTGTACAATGAGTAGTTTTCGTCAGTTGTGCTTTGTCATGGGGATAGCTGAATTTCTTCAGGAAGTCTTGTAGTTTTAAAGAGTTCATTAGCTTGCCAATTGTTTGCTTTGGATTAAAAAGGTCTCTTACTGCCTTTGCATCATCATCTGCAGTGCACAGAATAAAACATT]

[+] EMBL CF297316             [TGGACTGAAGGAGTAGAAAATCTCATCTCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAAT   GGGCCAAATTGCTTACGCAAATATTGATCCATATTACGGAAGCCTTTATGCAGCTTATGGTGGACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK065163             [                     CTCATCTCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAAT   GGGCCAAATTGCTTACGCAAATATTGATCCATATTACGGAAGCCTTTATGCAGCTTATGGTGGACAGCCTATGATGCATCCACCATTGGTCGGGATGCATCCAGCTGGACTACCACTGCCTACCGATGCAATTGAAGAGCCTGTCTATGTTAATGCAAAACAGTACAATGCCATATTAAGGCGTCGACAATCTCGAGCCAAAGCTGAGTCTGAAAAGAAGCTTGTCAAGGGCCGTAAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGTTCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCGTCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAAACGGGATTTAAACACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTACATGCTAGCGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGGGCAACAGATTTTGCAGCCTTTGGTTCGGTCTGCTCAGTTTCTTTACCTTCTTGTACAATGAGTAGTTTTCGTCAGTTGTGCTTTGTCATGGGGATAGCTGAATTTCTTCAGGAAGTCTTGTAGTTTTAAAGAGTTCATTAGCTTGCCAATTGTTTGCTTTGGATTGGATTGGTCTCTTACTGCCTTTGCATCATCATCTGCAGTGCACAGAATAAAACATT]
[+] EMBL CF278892             [                     CTCATCTCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAATGCAGGGCCAAATTGCTTACGCAAATATTGATCCATATTACGGAAGCCTTTATGCAGCTTATGGTGGACAGCCTATGATGCATCCACCATTGGTCGGGATGCATCCAGCTGGACTACCACTGCCTACCGATGCAATTGAAGAGCCTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU172431             [                                  CCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CK085241             [                                                          CCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAAT   Gcagggcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF297315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTCAAGGGCCGTAAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGTTCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCGTCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAAACGGGATTTAAGCACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTACATGCTAGTGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGGGCAACAGATTTTGCAGCCTTTGGTTCGGTCTGCTCAGTTTCTTTACCTTCTTGTACAATGAGTAGTTTTCGTCAGTTGTGCTTTGTCATGGGGATAGCTGAATTTCTTCAGGAAGTCTTGTAGTTTTAAAGAGTTCATTAGCTTGCCAATTGTTTGCTTTGGAAAAAAAA                                                   ]
[-] EMBL CF278893             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGGGCAACAGATTTTGCAGCCTTTGGTTCGGTCTGCTCAGTTTCTTTACCTTCTTGTACAATGAGTAGTTTTCGTCAGTTGTGCTTTGTCATGGGGATAGCTGAATTTCTTCAGGAAGTCTTGTAGTTTTAAAGAGTTCATTAGCTTGCCAATTGTTTGCTTTGGATTAAAAAaaa                                                ]


>consensus_12173#0 TGGACTGAAGGAGTAGAAAATCTCATCTCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCC GTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGT TCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTCCCGGAAGTGTGGTGTGCT GCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAA GCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTG CAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGA TGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTAC TAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGC CCATCACGATATGGCCCATGCAATGGGCCAAATTGCTTACGCAAATATTGATCCATATTA CGGAAGCCTTTATGCAGCTTATGGTGGACAGCCTATGATGCATCCACCATTGGTCGGGAT GCATCCAGCTGGACTACCACTGCCTACCGATGCAATTGAAGAGCCTGTCTATGTTAATGC AAAACAGTACAATGCCATATTAAGGCGTCGACAATCTCGAGCCAAAGCTGAGTCTGAAAA GAAGCTTGTCAAGGGCCGTAAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAA AAGGGCTAGGGGAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCA TTCTGATTCCAGTTCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACC GTCTACCTCTCCGTCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAAC CAGTAACTAAACGGGATTTAAACACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTAC ATGCTAGTGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGA ATATATAGACAGGGCAACAGATTTTGCAGCCTTTGGTTCGGTCTGCTCAGTTTCTTTACC TTCTTGTACAATGAGTAGTTTTCGTCAGTTGTGCTTTGTCATGGGGATAGCTGAATTTCT TCAGGAAGTCTTGTAGTTTTAAAGAGTTCATTAGCTTGCCAATTGTTTGCTTTGGATTAA AAAGGTCTCTTACTGCCTTTGCATCATCATCTGCAGTGCACAGAATAAAACATT



consensusID : consensus_12173#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 547
fasta sequence
                              [TCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTTTCTGTTTTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCTTTACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAATGGTACATTACATGTATTTTTTCCCTTTTTTAGTTATGAGCAAGTAGTATAACTTCTGTTCTTTCAGTTTG]

[+] EMBL CF306126             [TCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTTTCTGTTTTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCTTTACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAATGGTACATTACATGTATTTTTTCCCTTTTTTAGTTATGAGCAAGTAGTATAACTTCTGTTCTTTCAGTTTG]
[+] EMBL CF305925             [TCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCTTTTTTTTGTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAATGGTA                                                                  ]


>consensus_12173#1 TCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCCGTCGCCGCCGCTCGCCGCCGGCGGGGA TAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGTTCCCTCACCATCCCGCACCTCCGCTCG CCTGGCCTCTTCCTTTCTGTTTTGTGGTGTGCTGCAAGCTCCTGTCTCTCCTACAAGGTT TCTTTACCAAAATATGCCTGAAGCACACGGAAAGCTGGGGTGATTAACGTCTGTTTCTTT TGACTACAATCATCCTGATTCTGCTTCTGTCTGCAAAAACAACCAAGCCATGACGTCTGT AGTTCATGATGTTTCAGGCAACCATGGAGCTGATGAGCGGCAAAAACAGCAAAGGCAAGG TGAACCTGAGGACCAGCAAGAAGCCTCAGTTACTAGTACAGATAGCCATACAATGGTAGC AACACCTTCAACAGATTATGCGACACCCTATGCCCATCACGATATGGCCCATGCAATGGT ACATTACATGTATTTTTTCCCTTTTTTAGTTATGAGCAAGTAGTATAACTTCTGTTCTTT CAGTTTG



consensusID : consensus_12173#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 440
fasta sequence
                              [TCAAGTTCTTTGTACCTATGTTTCTGTATCTTCTAAAGATTTTGATTCGTCTGCACTGTGCAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGTTCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCGTCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAAACGGGATTTAAGCACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTACATGCTAGTGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGGGCAACAGATTTTGCAAAAAAAAAAAA]

[+] EMBL AU172432             [TCAAGTTCTTTGTACCTATGTTTCTGTATCTTCTAAAGATTTTGATTCGTCTGCACTGTGCAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGTTCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCGTCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAAACGGGATTTAAGCACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTACATGCTAGTGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGGGCAACAGATTTTGCAAAAAAAAAAAA]


>consensus_12173#2 TCAAGTTCTTTGTACCTATGTTTCTGTATCTTCTAAAGATTTTGATTCGTCTGCACTGTG CAGCCATATCTCCATGAGTCACGGCATCAACATGCCCTGAAAAGGGCTAGGGGAGCTGGA GGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCAGTTCCAGA GATAAACAGGATGGAGTTGCACCCCGTGATAGTGGCCAACCGTCTACCTCTCCGTCTTCA AAGGGTGCATCATCAGCTAAACAAAATAAGAAGTCAAAAACCAGTAACTAAACGGGATTT AAGCACCTGGTGTGAAACATGGAAACAGTTTTGTACAGTACATGCTAGTGATCGACAAAG AATGGTGTCATTGGGTGTTGTAGGATAATGCTCCATAGAGAATATATAGACAGGGCAACA GATTTTGCAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12173#0      TGGACTGAAGGAGTAGAAAATCTCATCTCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCC 60
consensus_12173#1      ---------------------------TCCCTCTCCTCTCCTCTCGCCGTCGCCGTCGCC 33
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      GTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGT 120
consensus_12173#1      GTCGCCGCCGCTCGCCGCCGGCGGGGATAGAGTTCGCCGGGATCGCCTCGCCGGGAGAGT 93
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      TCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCT-CCCGGAAGTGTGGTGTGC 179
consensus_12173#1      TCCCTCACCATCCCGCACCTCCGCTCGCCTGGCCTCTTCCT-TTCTGTTTTGTGGTGTGC 152
consensus_12173#2      ---TCAAGTTCTTTGTACCTATGTTTCTGTATCTTCTAAAGATTTTGATTCGTC-TGCAC 56
                             *       * ****  * *    *  * ***         *    **  **  *

consensus_12173#0      TGCAAGCTCCTGTCTCTCCTACAAGGTTTCAAAACCAAAATATGCCTGAA-GCACACGGA 238
consensus_12173#1      TGCAAGCTCCTGTCTCTCCTACAAGGTTTCTTTACCAAAATATGCCTGAA-GCACACGGA 211
consensus_12173#2      TGTGCAGCCATATCTCCATGA----GTCACGGCATCAACATGCCCTGAAAAGGGCTAGGG 112
                       **      * * ****    *    **  *   * *** **   *   ** *  *  ** 

consensus_12173#0      AAGCTGGGG--TGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTG 296
consensus_12173#1      AAGCTGGGG--TGATTAACGTCTGTTTCTTTTGACTACAATCATCCTGATTCTGCTTCTG 269
consensus_12173#2      GAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGAAGAGCATTCTGATTCCA 172
                        ****** *   ****      *      *  **  ****  *     ****** ***  

consensus_12173#0      TCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAG 356
consensus_12173#1      TCTGCAAAAACAACCAAGCCATGACGTCTGTAGTTCATGATGTTTCAGGCAACCATGGAG 329
consensus_12173#2      GTTCCAGAGATAAACAGG--ATGGAGT-TGCACCCCGTGATAGT--GGCCAACCGTCTAC 227
                         * ** * * ** ** *  ***  ** ** *   * ****  *   * ***** *  * 

consensus_12173#0      CTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAG 416
consensus_12173#1      CTGATGAGCGGCAAAAACAGCAAAGGCAAGGTGAACCTGAGGACCAGCAAGAAGCCTCAG 389
consensus_12173#2      CTCTCCGTCTTCAAAGGGTGCATCATCA-GCTAAACAAAATAAGAAGTCAAAAACC--AG 284
                       **      *  ****    ***    ** * * ***   *  *  **  * ** **  **

consensus_12173#0      TTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCT 476
consensus_12173#1      TTACTAGTACAGATAGCCATACAATGGTAGCAACACCTTCAACAGATTATGCGACACCCT 449
consensus_12173#2      TAACTAAACGGGAT--TTAAGCACCTGGTGTGAAACATGGAAACAGTTTTGT-ACAGTAC 341
                       * ****     ***    *  **   *  *  * ** *  **    ** **  ***    

consensus_12173#0      ATGCCCATCA-CGATATGGCCCA-TGCAATGGGCCAAATTGCTTACGCAAATATTGATCC 534
consensus_12173#1      ATGCCCATCA-CGATATGGCCCA-TGCAATGGTACA------TTACATGTATTTTTTCCC 501
consensus_12173#2      ATGCTAGTGATCGACAAAGAATGGTGTCATTGGGTG------TTGTA-GGATAATGCTCC 394
                       ****   * * *** *  *     **  ** *          **      **  *   **

consensus_12173#0      ATATTACGGAAGCCTTTATGCAGCTTATGGTGGACAGCCTATGATGCATCCACCATTGGT 594
consensus_12173#1      TTTTTTAG-------TTATG-AGCAAGTAGT--ATAACTTCTGTTCTTTCAGT--TTG-- 547
consensus_12173#2      ATAGAGAA--------TATATAGACAGGGCA--ACAGATTTTGCAAAAAAAAAAAA---- 440
                        *              ***  **          * *   * **                 

consensus_12173#0      CGGGATGCATCCAGCTGGACTACCACTGCCTACCGATGCAATTGAAGAGCCTGTCTATGT 654
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      TAATGCAAAACAGTACAATGCCATATTAAGGCGTCGACAATCTCGAGCCAAAGCTGAGTC 714
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      TGAAAAGAAGCTTGTCAAGGGCCGTAAGCCATATCTCCATGAGTCACGGCATCAACATGC 774
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      CCTGAAAAGGGCTAGGGGAGCTGGAGGCCGATTTCTTAATTCAAAATCGGATGACAAGGA 834
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      AGAGCATTCTGATTCCAGTTCCAGAGATAAACAGGATGGAGTTGCACCCCGTGATAGTGG 894
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      CCAACCGTCTACCTCTCCGTCTTCAAAGGGTGCATCATCAGCTAAACAAAATAAGAAGTC 954
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      AAAAACCAGTAACTAAACGGGATTTAAACACCTGGTGTGAAACATGGAAACAGTTTTGTA 1014
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      CAGTACATGCTAGTGATCGACAAAGAATGGTGTCATTGGGTGTTGTAGGATAATGCTCCA 1074
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      TAGAGAATATATAGACAGGGCAACAGATTTTGCAGCCTTTGGTTCGGTCTGCTCAGTTTC 1134
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      TTTACCTTCTTGTACAATGAGTAGTTTTCGTCAGTTGTGCTTTGTCATGGGGATAGCTGA 1194
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      ATTTCTTCAGGAAGTCTTGTAGTTTTAAAGAGTTCATTAGCTTGCCAATTGTTTGCTTTG 1254
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   

consensus_12173#0      GATTAAAAAGGTCTCTTACTGCCTTTGCATCATCATCTGCAGTGCACAGAATAAAACATT 1314
consensus_12173#1      ------------------------------------------------------------
consensus_12173#2      ------------------------------------------------------------
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)