cluster # 12184

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Oryza sativa
cluster # 12184 cluster # 12184 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12184#0 length = 773 sequences # 10
consensusID : consensus_12184#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 773
fasta sequence
                              [GTCGGNCGGCCTCGGCCTTGGGCCANCGACGACCGTTCCCTCGAAGCCGCTTCTCCCACTTTCGGCGAGATCCTCGAGTCCAAGATCATCAACGATCGGNAGACGGGGAGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGAGGGGATGAACGGCAAGGAGCTCGACGGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACGGCCAGCGCGGCGGAGGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCGGCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACTTACCGTAT]

[+] EMBL AU082501             [GTCGGNCGGCCTCGGCCTTGGGCCANCGACGACCGTTCCCTCGAAGCCGCTTCTCCCACTTTCGGCGAGATCCTCGAGTCCAAGATCATCAACGATCGGNAGACGGGGAGTCGCGCGGGTTCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGAGGGGATGAACGGCAAGGAGCTCGACGGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGAGGCGGAGGCGGAGGCGGCTACGGCCAGCGCGGCGGAGGCGGAGGCTACGGTGGCGGCGGCGGCTACGGTGGTGGCGNCGNCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAA                                                                                        ]
[-] EMBL CF326221             [                                                                                                                                                                                                                                                                         AGCGCGGCGGAGGCGGAGGCTACGGTGACGGCGGCGGCTACGGTGGTGGCGGCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAc                                                                                ]
[+] EMBL AU183159             [                                                                                                                                                                                                                                                                                      CGNAGGCTACGGTGCCGGCGGCGGCTACGGTGGTGNCGGCGGCGGTGGCTACGGCCAGCNCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCANCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGANCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAAAAAAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCCAAAAAAAAAAAAAAAAAAAAAAAA                                                                     ]
[+] EMBL AU094592             [                                                                                                                                                                                                                                                                                                              CTACGGTGGTGGCGGCGNCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAA                                                                            ]
[+] EMBL AU078374             [                                                                                                                                                                                                                                                                                                               TACGGTGGTGGCGGCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCAGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTTATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAA                                                                                  ]
[+] EMBL AU182380             [                                                                                                                                                                                                                                                                                                                        GGCGNCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGNCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCANCCGCGGNGGCGGCAACTCCGACGGGAACTGGAGGAACTGANCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCNNCCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACNATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAANAANAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAA                                                                      ]
[+] EMBL AU223134             [                                                                                                                                                                                                                                                                                                                                   TGGCTACGGCCAGCNCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTNCGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCT    AAAAAAAAAAAAA                                                                                 ]
[+] EMBL AU082500             [                                                                                                                                                                                                                                                                                                                                         CGGCCAGCGCCGTGAAGGCGGCTACGGCGGTGGCGGCGGCTACGGTGGCGGCCGTGGCGNCGGCGGCGGCTACGNCGGTGGCTACGGCAGCCGCGNCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGTTTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAA                                                                                         ]
[-] EMBL CF335534             [                                                                                                                                                                                                                                                                                                                                                                                                        CGCCGGCTAGGGCGGTGGCTACGGCATCCGCGGCGGCGGCAACTCCGACGGGAACTGGAGAAACTGAGCGGTGGGGCCCTCATGGCCAAGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGCTTTGTGTGGAAGTACTATTTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGATCGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTAGTCAAAAAAAAAAAAA                                                                                 ]
[+] EMBL CF328479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCAAATGAAATGAATGAATGAATCTTAGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACTTACCGTAT]




>consensus_12184#0
GTCGGNCGGCCTCGGCCTTGGGCCANCGACGACCGTTCCCTCGAAGCCGCTTCTCCCACT
TTCGGCGAGATCCTCGAGTCCAAGATCATCAACGATCGGNAGACGGGGAGTCGCGCGGGT
TCGGGTTCGTGACGTTCTCGAGCGAGCAGGCCATGCGCGACGCCATCGAGGGGATGAACG
GCAAGGAGCTCGACGGGCCGCAACATCACCGTCAACGAGGCCCAGTCGCGCCGCTCCGGA
GGCGGAGGCGGAGGCGGCTACGGCCAGCGCGGCGGAGGCGGAGGCTACGGTGGCGGCGGC
GGCTACGGTGGTGGCGGCGGCGGTGGCTACGGCCAGCGCCGTGAAGGCGGCTACGGCGGT
GGCGGCGGCTACGGTGGCGGCCGTGGCGGCGGCGGCGGCTACGGCGGTGGCTACGGCAGC
CGCGGCGGCGGCAACTCCGACGGGAACTGGAGGAACTGAGCGGTGGGGCCCTCATGGCCA
AGTTATCTATCTATCTAATCGAGCTACCATCATCATCATCCGATCGTTATCATCGTTAGT
TTTGTGTGGAACTACTATCTAGTTTGTGTTACTGTGTGGTTGCCCATCTGTGTTTTTGAT
CGCAAGAAGAAAGCTCGTCTCGTGTTTGCTTTGATCAAATGAAATGAATGAATGAATCTT
AGTGTGCTCCGCTCTCGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACTTACCGTAT
clustalw multiple alignements is not computed in this case