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Oryza sativa
cluster # 12185 cluster # 12185       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12185#0 length = 1200 sequences # 7  
consensus_12185#1 length = 846 sequences # 1  
consensus_12185#2 length = 478 sequences # 2  

consensusID : consensus_12185#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1200
fasta sequence
                              [CTCCGCGTGGGCTGCTCTGCTTCGTTTCCGCGGCGGAGGCGGGGCGGGGCTGGGCCTGTCGGCCAGGGACAGGGAGCCAGGGAGGTTGCCGCTCATGGAGATGGAAGATAGCGGTCGCGGCGTCGTGGGCGCCGGGAAGCGCGGCGTCGCGGAGACCTTCTCCAGGCTCCGGGAGCAGGGCAAGACTGCATTCATTCCATTCATCACCGCCAGTGACCCTGACTTGGCAACCACATCGAAAGCGTTGAAGATCCTTGATTCCTGTGGTTCAGATGTGATTGAGCTGGGTGTACCTTACTCGGATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGGCGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCCAATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGCTATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGACAGCGCTGTTGAGGAATGAGGCTGTCAT-GCATGGCATAGAGCTGGTGCTGCTTACAACACCAACCACACCAACAGAGA-GGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGT-AAATTTGCGTGTTGAGT-ACCTTCTTCAGGAGAT-CA-AGAAGGTTACAGACAAACCTGTTGCTGTTGGCTTTGGCATATCGACTCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCA-TCGGCAGCGCTATTGTTA-GA-CA-GTTAGGAGAGGCTGCTTCA-CCTGAAGAAGGGTTGAAAAGAGTA-GAAGAGTATGCCAAGA-ACATGAAGGCTGCTAT-GCCTTGAGATGAGCGGTT-CCATGCCT-CCACCCAT-GCAAGCCAACAAGAAGGCAGTACATCG-TTTTTTTTGT-----CT-GATTAAATT-GCATAGCATT-TTAAT-CCAGTATTTT-CTTGTAT-GATTCATGAATCATGACTGTATCTCACTCTAGTACTATCCTTCTGTTAACATACAGATGAATAATAAAGAAGGTAGCTCAGAAACTGTCTGAAATAGCTGTCCCAGAATTGCATCTCCAATTTTGTAAGTTCATAAATAAAATCCAATGAACATTTATG]

[+] EMBL AK073440             [CTCCGCGTGGGCTGCTCTGCTTCGTTTCCGCGGCGGAGGCGGGGCGGGGCTGGGCCTGTCGGCCAGGGACAGGGAGCCAGGGAGGTTGCCGCTCATGGAGATGGAAGATAGCGGTCGCGGCGTCGTGGGCGCCGGGAAGCGCGGCGTCGCGGAGACCTTCTCCAGGCTCCGGGAGCAGGGCAAGACTGCATTCATTCCATTCATCACCGCCAGTGACCCTGACTTGGCAACCACATCGAAAGCGTTGAAGATCCTTGATTCCTGTGGTTCAGATGTGATTGAGCTGGGTGTACCTTACTCGGATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGGCGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCCAATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGCTATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGACAGCGCTGTTGAGGAATGAGGCTGTCAT GCATGGCATAGAGCTGGTGCTGCTTACAACACCAACCACACCAACAGAGA GGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGT AAATTTGCGTGTTGAGT ACCTTCTTCAGGAGAT CA AGAAGGTTACAGACAAACCTGTTGCTGTTGGCTTTGGCATATCGACTCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCA TCGGCAGCGCTATTGTTA GA CA GTTAGGAGAGGCTGCTTCA CCTGAAGAAGGGTTGAAAAGAGTA GAAGAGTATGCCAAGA ACATGAAGGCTGCTAT GCCTTGAGATGAGCGGTT CCATGCCT CCACCCAT GCAAGCCAACAAGAAGGCAGTACATCG TTTTTTTTGT     CT GATTAAATT GCATAGCATT TTAAT CCAGTATTTT CTTGTAT GATTCATGAATCATGACTGTATCTCACTCTAGTACTATCCTTCTGTTAACATACAGATGAATAATAAAGAAGGTAGCTCAGAAACTGTCTGAAATAGCTGTCCCAGAATTGCATCTCCAATTTTGTAAGTTCATAAATAAAATCCAATGAACATTTATG]
[+] EMBL CB652212             [CTCCGCGTGGGCTGCTCTGCTTCGTTTCCGCGGCGGAGGCGGGGCGGGGCTGGGCCTGTCGGCCAGGGACAGGGAGCCAGGGAGGTTGCCGCTCATGGAGATGGAAGATAGCGGTCGCGGCGTCGTGGGCGCCGGGAAGCGCGGCGTCGCGGAGACCTTCTCCAGGCTCCGGGAGCAGGGCAAGACTGCATTCATTCCATTCATCACCGCCAGTGACCCTGACTTGGCAACCACATCGAAAGCGTTGAAGATCCTTGATTCCTGTGGTTCAGATGTGATTGAGCTGGGTGTACCTTACTCGGATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGGCGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCCAATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGCTATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGACAGCGCTGTTGAGGAATGAGGCTGTCAT GCATGGCATAGAGCTGGTGCTGCTTACAACACCAACCACACCAACAGAGA GGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCTTGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB000386             [                                                                                                                                                                                      AGACTGCATTCATTCCATTCATCACCGCCAGTCATCCTGACTTGGCAACCACATCGAAAGCGTTGAAGATCCTTGATTCCTGTGGTTCAGATGTGATTGAGCTGGGTGTACCTTACTCGGATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGGCGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCCAATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGCTATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGACAGCGCTGTTGAGGAATGAGGCTGTCAT GCATGGCATAGAGCTGGTGCTGCTTACAACACCAACCACACCAACAGAGA GGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGT AAATTTGCGTGTTGAGT ACCTTCTTCAGGAGAT CA AGAAGGTTACAGACAAACCTGTTGCTGTTGGCTTTGGCATATCGACTCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCA TCGGCAGCGCTATTGTTA GA CA GTTAGGAGAGGCTGCTTCA CCTGAAGAAGGGTTGAAAAGAGTA GAAGAGTATGCCAAGA ACATGAAGGCTGCTAT GCCTTGAGATGAGCGGTT CCATGCCT CCACCCAT GCAAGCCAACAAGAAGGCAGTACATCGTTTTTTTTTGT     CT GATTTAATT GCATAG                                                                                                                                                                                             ]
[+] EMBL CA999783             [                                                                                                                                                                                                                                                                                                              ATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGGCGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCCAATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGCTATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGACAGCGCTGTTGAGGAATGAGGCTGTCAT GCATGGCATAGAGCTGGTGCTGCTTACAACACCAACCACACCAACAGAGA GGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGT AAATTTGCGTGTTGAGT ACCTTCTTCAGGAGAT CA AGAAGGTTACAGACAAACCTGTTGCTGTTGGCTTTGGCATATCGACTCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCA TCGGCAGCGCTATTGTTA GA CA GTTAGGAGAGGCTGCTTCA CCTGAAGAAGGGTTGAAAAGAGTA GAAGAGTATGCCAAGA ACATGAAGGCTGCTAT GCCTTGAGATGAGCGGTT CCATGCCT CCACCCAT GCAAGCCAACAAGAAAGCAGTACATCGTTTTTTTTTGT     CT GAT                                                                                                                                                                                                          ]
[+] EMBL CA999738             [                                                                                                                                                                                                                                                                                                              ATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGGCGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCCAATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGCTATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGACAGCGCTGTTGAGGAATGAGGCTGTCAT GCATGGCATAGAGCTGGTGCTGCTTACAACACCAACCACACCAACAGAGA GGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGT AAATTTGCGTGTTGAGT ACCTTCTTCAGGAGAT CA AGAAGGTTACAGACAAACCTGTTGCTGTTGGCTTTGGCATATCGACTCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCA TCGGCAGCGCTA                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA998268             [                                                                                                                                                                                                                                                                                                              ATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGGCGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCCAATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGCTATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGACAGCGCTGTTGAGGAATGAGGCTGTCAT GCATGGCATAGAGCTGGTGCTGCTTACAACACCAACCACACCAACAGAGA GGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGT AAATTTGCGTGTTGAGT ACCTTCTTCAGGAGAT CA AGAAGGTTACAGACAAACCTGTTGCTGTTGGCTTTGGCATATCGACTCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCA TCGG                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BQ909248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGAATGACGCTGTCATCGCATGGCATAGAGCTGGT CTGCTTACNACACCTACCACACC ACAGAGATGGATGAAGGAGATTGCCAAAGCTTCAGAAGGATTTATTTATCTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGTGAAATTTGCGTGTTGAGTGACCTTCTTCAGGAGATGCACAGAAGGTTACAGACCAACCTGTTGCTGTTGGCTTTGGCATATCGACTCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCACTCGGCAGCGCTATTGTTATGACCACGTTAGGAGAGGCTGCTTCACCCTGAAGAAGGGTTGAAAAGAGTATGAAGAGTATGCCAAGAGACATGAAGGCTGCTATGGCCTTGAGATGAGCGGTTGCCATGCCTGCCACCCATGGCAAGCCAACAAGAAGGCAGTATATCG TTTTTTTTGTTTGTGCTGGATTAAATTGGCATAGCATTGTTAATGCCAGTATTTTNCTTGTATGGATTCATGAATCATGACTGTATCTCACTCTAGTACTATCCTTCTGTTAACATACAGATGAATAATAAAGAAGGTAGCTCAGAAACTGTCTGAAAaaaaaaa                                                          ]


>consensus_12185#0 CTCCGCGTGGGCTGCTCTGCTTCGTTTCCGCGGCGGAGGCGGGGCGGGGCTGGGCCTGTC GGCCAGGGACAGGGAGCCAGGGAGGTTGCCGCTCATGGAGATGGAAGATAGCGGTCGCGG CGTCGTGGGCGCCGGGAAGCGCGGCGTCGCGGAGACCTTCTCCAGGCTCCGGGAGCAGGG CAAGACTGCATTCATTCCATTCATCACCGCCAGTGACCCTGACTTGGCAACCACATCGAA AGCGTTGAAGATCCTTGATTCCTGTGGTTCAGATGTGATTGAGCTGGGTGTACCTTACTC GGATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGG CGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCC AATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGC TATCATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAGAC AGCGCTGTTGAGGAATGAGGCTGTCATGCATGGCATAGAGCTGGTGCTGCTTACAACACC AACCACACCAACAGAGAGGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTATCT TGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGTAAATTTGCGTGTTGAGTACCT TCTTCAGGAGATCAAGAAGGTTACAGACAAACCTGTTGCTGTTGGCTTTGGCATATCGAC TCCAGAGCATGTAAAGCAGATTGCAGGCTGGGGAGCAGATGGTGTGATCATCGGCAGCGC TATTGTTAGACAGTTAGGAGAGGCTGCTTCACCTGAAGAAGGGTTGAAAAGAGTAGAAGA GTATGCCAAGAACATGAAGGCTGCTATGCCTTGAGATGAGCGGTTCCATGCCTCCACCCA TGCAAGCCAACAAGAAGGCAGTACATCGTTTTTTTTGTCTGATTAAATTGCATAGCATTT TAATCCAGTATTTTCTTGTATGATTCATGAATCATGACTGTATCTCACTCTAGTACTATC CTTCTGTTAACATACAGATGAATAATAAAGAAGGTAGCTCAGAAACTGTCTGAAATAGCT GTCCCAGAATTGCATCTCCAATTTTGTAAGTTCATAAATAAAATCCAATGAACATTTATG



consensusID : consensus_12185#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 846
fasta sequence
                              [CTTACTAAGGCTACAGAACATCACTTTTTCATGGCTAATTCCCTTTAAAACAGATCATGCCATCAGGGAGTAACATGCAAATTAGTATAGCTGTTTGCTCGCTAATGCACAGCTGCTAAATTGACAAGACCAATTCAACTATACTTGCTTATGTTACACTGCTTGTTCCAATGTTACACTGTCCCTGGAATTCAGATATGCTTAATCTCTTTCATTCTGACTTGACAAGGTAGCCCGCCAACCAACCACTTGGTTCATTTTGATTCCAGATTTCCAGTCAAGAACATGTCATAGCTAGATGATGATGATAAGCATAGAAGAAGTGTATCCCTTTCCCCTCGAAAAAGCATAGAAGAAGTGTATGAATATATATGGGTTTAATTCGTTATGGAGAACTGGAAGAAAAGTGTCAGCATCTGGGACCATGGGGATCATTTTGAAAGACAAGTGACCCCTGCAAATTGCAGTCTTCCTGGAGAACTTGGGCAATTAGGGGAGGAAATCTGAAGGCAAAGTCGCTTTCAGCGCAGCCGTTGTGCTGCCTCATCCATGGACAAGAGATGATGGATTCAGACGGCATAATCTCCAGTCAGCCATGGAAATCATCCAGGCCTTATCCGTCCTTGATGTGTTGCCTCCTATCCCCACAGGAATAGGAATATGGGATAACTCATTCCAATCGCTGTCTTTTCAGCAAAATTGGAGATGCAATTCTGGGACAGCTATTTCAGACAGTTTCTGAGCTACCTTCTTTATTATTCATCTTCTTGTTGGCTTGCATGGGTGGAGGCATGGAACCGCTCATCTCAAGGCATAGCAGCCTTCATGTTCTTGGCATACTCTTCT]

[+] EMBL CB652213             [CTTACTAAGGCTACAGAACATCACTTTTTCATGGCTAATTCCCTTTAAAACAGATCATGCCATCAGGGAGTAACATGCAAATTAGTATAGCTGTTTGCTCGCTAATGCACAGCTGCTAAATTGACAAGACCAATTCAACTATACTTGCTTATGTTACACTGCTTGTTCCAATGTTACACTGTCCCTGGAATTCAGATATGCTTAATCTCTTTCATTCTGACTTGACAAGGTAGCCCGCCAACCAACCACTTGGTTCATTTTGATTCCAGATTTCCAGTCAAGAACATGTCATAGCTAGATGATGATGATAAGCATAGAAGAAGTGTATCCCTTTCCCCTCGAAAAAGCATAGAAGAAGTGTATGAATATATATGGGTTTAATTCGTTATGGAGAACTGGAAGAAAAGTGTCAGCATCTGGGACCATGGGGATCATTTTGAAAGACAAGTGACCCCTGCAAATTGCAGTCTTCCTGGAGAACTTGGGCAATTAGGGGAGGAAATCTGAAGGCAAAGTCGCTTTCAGCGCAGCCGTTGTGCTGCCTCATCCATGGACAAGAGATGATGGATTCAGACGGCATAATCTCCAGTCAGCCATGGAAATCATCCAGGCCTTATCCGTCCTTGATGTGTTGCCTCCTATCCCCACAGGAATAGGAATATGGGATAACTCATTCCAATCGCTGTCTTTTCAGCAAAATTGGAGATGCAATTCTGGGACAGCTATTTCAGACAGTTTCTGAGCTACCTTCTTTATTATTCATCTTCTTGTTGGCTTGCATGGGTGGAGGCATGGAACCGCTCATCTCAAGGCATAGCAGCCTTCATGTTCTTGGCATACTCTTCT]


>consensus_12185#1 CTTACTAAGGCTACAGAACATCACTTTTTCATGGCTAATTCCCTTTAAAACAGATCATGC CATCAGGGAGTAACATGCAAATTAGTATAGCTGTTTGCTCGCTAATGCACAGCTGCTAAA TTGACAAGACCAATTCAACTATACTTGCTTATGTTACACTGCTTGTTCCAATGTTACACT GTCCCTGGAATTCAGATATGCTTAATCTCTTTCATTCTGACTTGACAAGGTAGCCCGCCA ACCAACCACTTGGTTCATTTTGATTCCAGATTTCCAGTCAAGAACATGTCATAGCTAGAT GATGATGATAAGCATAGAAGAAGTGTATCCCTTTCCCCTCGAAAAAGCATAGAAGAAGTG TATGAATATATATGGGTTTAATTCGTTATGGAGAACTGGAAGAAAAGTGTCAGCATCTGG GACCATGGGGATCATTTTGAAAGACAAGTGACCCCTGCAAATTGCAGTCTTCCTGGAGAA CTTGGGCAATTAGGGGAGGAAATCTGAAGGCAAAGTCGCTTTCAGCGCAGCCGTTGTGCT GCCTCATCCATGGACAAGAGATGATGGATTCAGACGGCATAATCTCCAGTCAGCCATGGA AATCATCCAGGCCTTATCCGTCCTTGATGTGTTGCCTCCTATCCCCACAGGAATAGGAAT ATGGGATAACTCATTCCAATCGCTGTCTTTTCAGCAAAATTGGAGATGCAATTCTGGGAC AGCTATTTCAGACAGTTTCTGAGCTACCTTCTTTATTATTCATCTTCTTGTTGGCTTGCA TGGGTGGAGGCATGGAACCGCTCATCTCAAGGCATAGCAGCCTTCATGTTCTTGGCATAC TCTTCT



consensusID : consensus_12185#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 478
fasta sequence
                              [CGAGCTCGTGCCGTTTTTTTTTTTTTTTTTTTGACAGAGGAATAATCCTGNCTGTNAAAAATTCANCTGTTGATCATTNGTCCTGGCATATCTACTCCANACCNTGTNTCCCGATTGCACNGCTGGGGAGCAGATGGTGTGATCATCGGCAGCGCTATTGTTNGACAGTTAGGAGAGGCTGCTTCACCTGAAGAAGGGTTGAAAAGAGTNGAAGAGTATGCCAAGAACATGAAGGCTGCTATGCCTTGAGATGAGCGGTTCCATGCCTCCACCCATGCAAGCCAACAAGAAGGCAGTACATCGTTTTTTTTTGTCTGATTAAATTGCATAGCATTTTNATCCAGTATTTTCTTGTNTGATTCATGAATCATGACTGTATCTCACTCTAGTACTATCCTTCTGTTNACATACAGATGAATAATAAAGAAGGTNGCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BE228283             [CGAGCTCGTGCCGTTTTTTTTTTTTTTTTTTTGACAGAGGAATAATCCTGNCTGTNAAAAATTCANCTGTTGATCATTNGTCCTGGCATATCTACTCCANACCNTGTNTCCCGATTGCACNGCTGGGGAGCAGATGGTGTGATCATCGGCAGCGCTATTGTTNGACAGTTAGGAGAGGCTGCTTCACCTGAAGAAGGGTTGAAAAGAGTNGAAGAGTATGCCAAGAACATGAAGGCTGCTATGCCTTGAGATGAGCGGTTCCATGCCTCCACCCATGCAAGCCAACAAGAAGGCAGTACATCGTTTTTTTTTGTCTGATTAAATTGCATAGCATTTTNATCCAGTATTTTCTTGTNTGATTCATGAATCATGACTGTATCTCACTCTAGTACTATCCTTCTGTTNACATACAGATGAATAATAAAGAAGGTNGCTCAGAA                                      ]
[+] EMBL CF316334             [                                                                                                                                                                                                                                                                                                                                                                                                         ATCCTTCTGTTAACATACAGATGAATAATAAAGAAGGTAGCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12185#2 CGAGCTCGTGCCGTTTTTTTTTTTTTTTTTTTGACAGAGGAATAATCCTGNCTGTNAAAA ATTCANCTGTTGATCATTNGTCCTGGCATATCTACTCCANACCNTGTNTCCCGATTGCAC NGCTGGGGAGCAGATGGTGTGATCATCGGCAGCGCTATTGTTNGACAGTTAGGAGAGGCT GCTTCACCTGAAGAAGGGTTGAAAAGAGTNGAAGAGTATGCCAAGAACATGAAGGCTGCT ATGCCTTGAGATGAGCGGTTCCATGCCTCCACCCATGCAAGCCAACAAGAAGGCAGTACA TCGTTTTTTTTTGTCTGATTAAATTGCATAGCATTTTNATCCAGTATTTTCTTGTNTGAT TCATGAATCATGACTGTATCTCACTCTAGTACTATCCTTCTGTTNACATACAGATGAATA ATAAAGAAGGTNGCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12185#0      CTCCGCGTGGGCTGCTCTGCTTCGTTTCCGCGGCGGAGGCGGGGCGGGGCTGGGCCTGTC 60
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      ------------------------------------------------------------
                                                                                   

consensus_12185#0      GGCCAGGGACAGGGAGCCAGGGAGGTTGCCGCTCATGGAGATGGAAGATAGCGGTCGCGG 120
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      ------------------------------------------------------------
                                                                                   

consensus_12185#0      CGTCGTGGGCGCCGGGAAGCGCGGCGTCGCGGAGACCTTCTCCAGGCTCCGGGAGCAGGG 180
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      ------------------------------------------------------------
                                                                                   

consensus_12185#0      CAAGACTGCATTCATTCCATTCATCACCGCCAGTGACCCTGACTTGGCAACCACATCGAA 240
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      ------------------------------------------------------------
                                                                                   

consensus_12185#0      AGCGTTGAAGATCCTTGATTCCTGTGGTTCAGATGTGATTGAGCTGGGTGTACCTTACTC 300
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      ------------------------------------------------------------
                                                                                   

consensus_12185#0      GGATCCGTTGGCTGATGGGCCGGTTATTCAGGCTGCAGCAACGCGTGCTCTTAAGAAAGG 360
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      ----------------------CTTACTAAGGCTACAGAACATCACTTTTTCATG----- 33
                                                                                   

consensus_12185#0      CGCTACATTTGATTCCGTCATAGCTATGCTCAAGGGGGTTATACCTGAGTTGTCTTGTCC 420
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      -GCTAATTCCCTTTAAAACAGATCATGCCATCAGGGAGTAACATGCAAATTAGTATAGCT 92
                                                                                   

consensus_12185#0      AATAGTTATCTTCACATACTACAACCCAATTTTAAAGCGCGGAGTGAGTAACTTCATGGC 480
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      GTTTGCTCGCTA-ATGCACAGCTGCTAAATTGACAAGACCAATTCAACTATACTTGCTTA 151
                                                                                   

consensus_12185#0      TAT--CATTAAACAAGCCGGCGTACATGGTCTTGTAGTACCTGATCTTCCTTTGGAAGAG 538
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      TGTTACACTGCTTGTTCCAATGTTACACTGTCCCTGGAATTCAGATATGCTTAATCTCTT 211
                                                                                   

consensus_12185#0      ACAGCGCTGTTGAGGAATGAGGCTGTCATGCATGGCATAGAGCTGGTGCTGCTTACAACA 598
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      TCATTCTGACTTGACAAGGTAGCCCGCCAACCAACCACTTGGTTCATTTTGATTCCAGAT 271
                                                                                   

consensus_12185#0      CCAACCACACCAACAGAGAGGATGAAGGAGATTGCAAAAGCTTCAGAAGGATTTATTTAT 658
consensus_12185#2      ------------------------------------------------------------
consensus_12185#1      TTCCAGTCAAGAACATGTCATAGCTAGATGATGATGATAAGCATAGAAGAA---GTGTAT 328
                                                                                   

consensus_12185#0      CTTGTAAGTTCTGTTGGAGTTACAGGTGCACGCTCAAATGTAAATTTGCGTGTTGAGTAC 718
consensus_12185#2      ----------------------------CGAGCTC--GTGCCGTTTTTTTTTTTTTTTTT 30
consensus_12185#1      CCCTT---TCCCCTCGAAAAAGCATAGAAGAAGTGT-ATGAATATATATGGGTTTAATTC 384
                                                        *    **    * *     **   *  

consensus_12185#0      CTTCTTCAGGAG---ATCAAGAAGGTTACAGACAAA---CCTGTTGCT-GTTGGCTTTGG 771
consensus_12185#2      TTGACAGAGGAATA-ATCCTGNCTGTNAAAAATTCA---NCTGTTGATCATTNGTCCTGG 86
consensus_12185#1      GTTATGGAGAACTGGAAGAAAAGTGTCAGCATCTGGGACCATGGGGATCATTTTGAAAGA 444
                        *     ** *    *        ** *             **  * *  **      * 

consensus_12185#0      CATATCGACTCCAGAGCATGTAAAGCAGATTGCA-GGCTGGGG--AGCAGATGGTGTGAT 828
consensus_12185#2      CATATCTACTCCANACCNTGTNTC-CCGATTGCACNGCTGGGG--AGCAGATGGTGTGAT 143
consensus_12185#1      CAAGTGACCCCTGCAAATTGCAGT-CTTCCTGGAGAACTTGGGCAATTAGGGGAGGAAAT 503
                       **  *   * *   *   **     *    ** *   ** ***  *  **  *  *  **

consensus_12185#0      C-ATCGGCAGCGCTATTGTTAG-ACAGTTAGGAGAGGCTGCTTCACC--TGAAGAAGGGT 884
consensus_12185#2      C-ATCGGCAGCGCTATTGTTNG-ACAGTTAGGAGAGGCTGCTTCACC--TGAAGAAGGGT 199
consensus_12185#1      CTGAAGGCAAAGTCGCTTTCAGCGCAGCC--GTTGTGCTGCCTCATCCATGGACAAGAGA 561
                       *    ****  *    * *  *  ***    *    ***** *** *  ** * *** * 

consensus_12185#0      TGAAAAGAGTAGAAG--AGTATGCCAAG---AACATGAAGGCTG-CTATGCCTTGAG-AT 937
consensus_12185#2      TGAAAAGAGTNGAAG--AGTATGCCAAG---AACATGAAGGCTG-CTATGCCTTGAG-AT 252
consensus_12185#1      TGATGGATTCAGACGGCATAATCTCCAGTCAGCCATGGAAATCATCCAGGCCTTATCCGT 621
                       ***        ** *  *  **  * **     **** *      * * *****     *

consensus_12185#0      GAGCGGTTCCATGCCTCC-ACCCATGCAAGCCAACAAGAAGGCAGTACATCGTTTTTTTT 996
consensus_12185#2      GAGCGGTTCCATGCCTCC-ACCCATGCAAGCCAACAAGAAGGCAGTACATCGTTTTTTTT 311
consensus_12185#1      CCTTGATGTGTTGCCTCCTATCCCCACAGG--AATAGGAATATGGGATAACTCATTCCAA 679
                           * *    ******* * **   ** *  ** * ***    * * * *   **    

consensus_12185#0      -GTCTGATTAAATTGCATAGCATTTTAATCCAGTATTTTCTTGTATGATTCATGAATCAT 1055
consensus_12185#2      TGTCTGATTAAATTGCATAGCATTTTNATCCAGTATTTTCTTGTNTGATTCATGAATCAT 371
consensus_12185#1      TCGCTGTCTTTTCAGCAAAAT-TGGAGATGCAATTCTGGGACAGCTATTTCAGACAGTTT 738
                          ***  *     *** *   *    ** ** *  *        *  ****   *   *

consensus_12185#0      GACTGTATCTCACTCTAGTACT-ATCCTTCTGTTAACATACAGATGAATAATAAAGAAGG 1114
consensus_12185#2      GACTGTATCTCACTCTAGTACT-ATCCTTCTGTTNACATACAGATGAATAATAAAGAAGG 430
consensus_12185#1      CTGAGCTACCTTCTTTATTATTCATCTTCTTGTTGGCTTGCATGGGTGGAGGCATGGAA- 797
                           *   *   ** ** ** * *** *  ****  * * **   *   *   * * *  

consensus_12185#0      TAGCTCAGAAACTGTCTGAAATAGCTGTCCCAGAATTGCATCTCCAATTTTGTAAGTTCA 1174
consensus_12185#2      TNGCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------ 478
consensus_12185#1      CCGCTC----ATCTCAAGGCATAGCAGCCTTCATGTTCTTGGCATACTCTTCT------- 846
                         ****    *         * *                      *              

consensus_12185#0      TAAATAAAATCCAATGAACATTTATG 1200
consensus_12185#2      --------------------------
consensus_12185#1      --------------------------
                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)