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Oryza sativa
cluster # 12191 cluster # 12191       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12191#0 length = 1795 sequences # 8  
consensus_12191#1 length = 524 sequences # 2  

consensusID : consensus_12191#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1795
fasta sequence
                              [AATAATCCCCTTCCCCTCCCTAAGGACGGCGGCTTTAACTCGAGCAGGCAACCAGGACGCGGAGGCTGCGCCACCGCCGCCGCCGCCGCTGCCGCTGCCGGCCACTTCCTCCACCCTCCCCTGAGCCTGTGCGCGCCCAAGCTCCACTTCGTCTCGCCTCTGAACCCTAGCTCCCCCTGGTGGTGTCTCGAATTCTCTCGTCGCGCCATCGCCATCGAACCCGGCGGTGATTTCGTTTGCTTGGTGTTCAAGTTGTGAGGAGACAATATGAGGCAGTGGTTTTGTTGTAATTGCCACTTTGACGAGGAGGATGACCATGGGAAGGAACGCTCCAATGCTCAGGGCAATAAGATGGATGCCAAGCAAAAGTCTTCAAAACCTCCTGCTGGTCAACCTGAACCAGAGATAGCCCCACTTACAATTGATGTCCCTGAGTTGTCACTGGAGGACTTAAAACAAAAAACCGACAATTTTGGATCAAATGCTCTGATTGGGTGAAGGTTCATATGGACGAGTATACCATGCCACTTTGGATGATGGGAGGCAAGCAGCAGTTAAAAAATTGGATGCATCTGAAAATGAGCCTAACGACGAATTCTTGAAACAGGTCTCCCAGGCATCAAGGCTAAAGCATGAAAATCTTGTGGAGATGTTGGGTTACTGTGTAGAGGGCAATTATCGTATACTGGCATACGAATTTGCGACCATGGGTTCCCTTCATGATGTTCTCCATGGAAGAAAAGGAGTTCAAGGTGCGCAGCCTGGTCCTGTACTTGATTGGACGCAGAGGGTAAAAATTGCTATAGAGGCAGCAAAAGGCTTAGAGTACCTGCATGAGAAGGTTCAGCCTTCAATCATTCATCGGGACATCAGATCAAGCAATGTACTTCTGTTTGAGGACTTCAAGGCAAAAATTGCAGATTTCAATCTCTTAAATCAAGCTCCAGATATGGCAGCACGCCTTCATTCAACTCGTGTATTAGGAACCTTTGGATATCATGCACCAGAATATGCTATGACTGGCCAGCTGACGCAGAAGAGTGATGTGTACAGTTTT-GGTGTAGTTCTTTTGGAACTCCTGACTGGAAGGAAACCAGTGGACCACACAATGCCTCGGGGACAGCAAAGTCTAGTCACTTGGGCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAAT-GTGTAGATCCTAGGTTAAAGAGTGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATACGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGC-AAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAATACTCCAGACATCGTTTGAACTTTCAATAGATGCAACATGTTCTGAATTTCATATGTGGCTGCGACAATCTTTGATG--ATATCCTATCCTCAAACTGAAACTGGGAACTTTCGAGTTCCAAGATTGCAATTTTATTATGGCTGGATGCATTGTACGGTAAAAAAAAAAAAAAAAA]

[+] EMBL CF334305             [AATAATCCCCTTCCCCTCCCTAAGGACGGCGGCTTTAACTCGAGCAGGCAACCAGGACGCGGAGGCTGCGCCACCGCCGCCGCCGCCGCTGCCGCTGCCGGCCACTTCCTCCACCCTCCCCTGAGCCTGTGCGCGCCCAAGCTCCACTTCGTCTCGCCTCTGAACCCTAGCTCCCCCTGGTGGTGTCTCGAATTCTCTCGTCGCGCCATCGCCATCGAACCCGGCGGTGATTTCGTTTGCTTGGTGTTCAAGTTGTGAGGAGACAATATGAGGCAGTGGTTTTGTTGTAATTGCCACTTTGACGAGGAGGATGACCATGGGAAGGAACGCTCCAATGCTCAGGGCAATAAGATGGATGCCAAGCAAAAGTCTTCAAAACCTCCTGCTGGTCAACCTGAACCAGAGATAGCCCCACTTACAATTGATGTCCCTGAGTTGTCACTGGAGGACTTAAAACAAAAAACCGACAATTTTGGATCAAATGCTCTGATTGGGTGAAGGTTCATATGGACGAGTATACCATGCCACTTTGGATGATGGGAGGCAAGCAGCAGTTAAAAAATTGGATGCATCTGAAAATGAGCCTAACGACGAATTCTTGAAACAGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK067164             [                                      CTCGAGCAGGCAACCAGGACGCGGAGGCTGCGCCACCGCCGCCGCCGCCGCTGCCGCTGCCGGCCACTTCCTCCACCCTCCCCTGAGCCTGTGCGCGCCCAAGCTCCACTTCGTCTCGCCTCTGAACCCTAGCTCCCCCTGGTGGTGTCTCGAATTCTCTCGTCGCGCCATCGCCATCGAACCCGGCGGTGATTTCGTTTGCTTGGTGTTCAAGTTGTGAGGAGACAATATGAGGCAGTGGTTTTGTTGTAATTGCCACTTTGACGAGGAGGATGACCATGGGAAGGAACGCTCCAATGCTCAGGGCAATAAGATGGATGCCAAGCAAAAGTCTTCAAAACCTCCTGCTGGTCAACCTGAACCAGAGATAGCCCCACTTACAATTGATGTCCCTGAGTTGTCACTGGAGGACTTAAAACAAAAAACCGACAATTTTGGATCAAATGCTCTGATT GGTGAAGGTTCATATGGACGAGTATACCATGCCACTTTGGATGATGGGAGGCAAGCAGCAGTTAAAAAATTGGATGCATCTGAAAATGAGCCTAACGACGAATTCTTGAAACAGGTCTCCCAGGCATCAAGGCTAAAGCATGAAAATCTTGTGGAGATGTTGGGTTACTGTGTAGAGGGCAATTATCGTATACTGGCATACGAATTTGCGACCATGGGTTCCCTTCATGATGTTCTCCATGGAAGAAAAGGAGTTCAAGGTGCGCAGCCTGGTCCTGTACTTGATTGGACGCAGAGGGTAAAAATTGCTATAGAGGCAGCAAAAGGCTTAGAGTACCTGCATGAGAAGGTTCAGCCTTCAATCATTCATCGGGACATCAGATCAAGCAATGTACTTCTGTTTGAGGACTTCAAGGCAAAAATTGCAGATTTCAATCTCTTAAATCAAGCTCCAGATATGGCAGCACGCCTTCATTCAACTCGTGTATTAGGAACCTTTGGATATCATGCACCAGAATATGCTATGACTGGCCAGCTGACGCAGAAGAGTGATGTGTACAGTTTT GGTGTAGTTCTTTTGGAACTCCTGACTGGAAGGAAACCAGTGGACCACACAATGCCTCGGGGACAGCAAAGTCTAGTCACTTGGGCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAAT GTGTAGATCCTAGGTTAAAGAGTGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATACGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGC AAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAATACTCCAGACATCGTTTGAACTTTCAATAGATGCAACATG                                                                                                                                        ]
[+] EMBL AU089691             [                                               GCAACCAGGACGCGGAGGCTGCGCCACCGCCGCCGCCGCCGCTGCCGCTGCCGGCCACTTCCTCCACCCTCCCCTGAGCCTGTGCGCGCCCAAGCTCCACTTCGTCTCGCCTCTGAACCCTAGCTCCCCCTGGTGGTGTCTCGAATTCTCTCGTCGCGCCATCGCCATCGAACCCGGCGGTGATTTCGTTTGCTTGGTGTTCAAGTTGTGAGGAGACAATATGAGGCAGTGGTTTTGTTGTAATTGCCACTTTGACGAGGAGGATGACCATGGGAAGGAACGCTCCAATGCTCAGGGCAATAAGATGGATGCCAAGCAAAAGTCTTCAAAACCTCCTGCTGGTCAACCTGAACCAGAGATAGCCCCACTTACAATTGATGTCCCTGAGTTGTCACTGGAGGACTTAAAACAAAAAACCGACAATTTTGGATCAAATGCTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF309691             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCCCTTCATGATGTTCTCCATGGAAGAAAAGGAGTTCAAGGTGCGCAGCCTGGTCCTGTACTTGATTGGACGCAGAGGGTAAAAATTGCTATAGAGGCAGCAAAAGGCTTAGAGTACCTGCATGAGAAGGTTCAGCCTTCAATCATTCATCGGGACATCAGATCAAGCAATGTACTTCTGTTTGAGGACTTCAAGGCAAAAATTGCAGATTTCAATCTCTTAAATCAAGCTCCAGATATGGCAGCACGCCTTCATTCAACTCGTGTATTAGGAACCTTTGGATATCATGCACCAGAATATGCTATGACTGGCCAGCTGACGCAGAAGAGTGATGTGTACAGTTTTGGGTGTAGTTCTTTTGGAACTCCTGACTGGAAGGAAACCAGTGGACCACACAATGCCTCGGGGACAGCAAAGTCTAGTCACTTGGGCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAATGGTGTAGATCCTAGGTTAAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA762587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACAATGCCTCGGGGACAGCAAAGTCTAGTCACTTGGGCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAAT GTGTAGATCCTAGGTTAAAGAGTGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATACGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTTTGCTTCAACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGACCTCCCGGCACATGCCAGTTTGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGCAAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTTAGAGGTGTCAAATACTCCAGACATCGTTTGAACTTTCAATAGATGCAACATGTTTTGAATTTCATATGTGGCTGCGACAATCTTTGATGATATATCCTATCCTCAAACTGAAACTGGGAACTTTCGAGTTCCAAGATTGCAATTTTATTATGGCTGGATGCATTGTACGGTAAAAAAAAAAAAAAAAA]
[-] EMBL CF309692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGACAGCAAAGTCTAGTCACTTGGGCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAAT GTGTAGATCCTAGGTTAAAGAGTGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATACGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGC AAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAATACTCCAGACATCGTTTGAACTTTCAATAGATGCAGCATGTTCTGAATTTCATATGTGGCTGCGACAATCTTTGATG  ATATCCTATCCTCAAACTGAAAaaa                                                                        ]
[+] EMBL AT003455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCGGTGGCAGCTCTTTGTGTCCAATACGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGC AAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAATACTCCAGACATCGTTTGAACTTTCAATAGATGCAACATGTTCTGAATTTCAaaaaaaa                                                                                                                     ]
[+] EMBL OS39593              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCAGATCACATGGGTTTGTCTTTGCCTTTNGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGCAAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAATACTCCAGACATCGTTTGAACTTTCAA                                                                                                                                                     ]


>consensus_12191#0 AATAATCCCCTTCCCCTCCCTAAGGACGGCGGCTTTAACTCGAGCAGGCAACCAGGACGC GGAGGCTGCGCCACCGCCGCCGCCGCCGCTGCCGCTGCCGGCCACTTCCTCCACCCTCCC CTGAGCCTGTGCGCGCCCAAGCTCCACTTCGTCTCGCCTCTGAACCCTAGCTCCCCCTGG TGGTGTCTCGAATTCTCTCGTCGCGCCATCGCCATCGAACCCGGCGGTGATTTCGTTTGC TTGGTGTTCAAGTTGTGAGGAGACAATATGAGGCAGTGGTTTTGTTGTAATTGCCACTTT GACGAGGAGGATGACCATGGGAAGGAACGCTCCAATGCTCAGGGCAATAAGATGGATGCC AAGCAAAAGTCTTCAAAACCTCCTGCTGGTCAACCTGAACCAGAGATAGCCCCACTTACA ATTGATGTCCCTGAGTTGTCACTGGAGGACTTAAAACAAAAAACCGACAATTTTGGATCA AATGCTCTGATTGGGTGAAGGTTCATATGGACGAGTATACCATGCCACTTTGGATGATGG GAGGCAAGCAGCAGTTAAAAAATTGGATGCATCTGAAAATGAGCCTAACGACGAATTCTT GAAACAGGTCTCCCAGGCATCAAGGCTAAAGCATGAAAATCTTGTGGAGATGTTGGGTTA CTGTGTAGAGGGCAATTATCGTATACTGGCATACGAATTTGCGACCATGGGTTCCCTTCA TGATGTTCTCCATGGAAGAAAAGGAGTTCAAGGTGCGCAGCCTGGTCCTGTACTTGATTG GACGCAGAGGGTAAAAATTGCTATAGAGGCAGCAAAAGGCTTAGAGTACCTGCATGAGAA GGTTCAGCCTTCAATCATTCATCGGGACATCAGATCAAGCAATGTACTTCTGTTTGAGGA CTTCAAGGCAAAAATTGCAGATTTCAATCTCTTAAATCAAGCTCCAGATATGGCAGCACG CCTTCATTCAACTCGTGTATTAGGAACCTTTGGATATCATGCACCAGAATATGCTATGAC TGGCCAGCTGACGCAGAAGAGTGATGTGTACAGTTTTGGTGTAGTTCTTTTGGAACTCCT GACTGGAAGGAAACCAGTGGACCACACAATGCCTCGGGGACAGCAAAGTCTAGTCACTTG GGCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAATGTGTAGATCCTAGGTTAAAGAG TGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATA CGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCA ACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGT TAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAAT TGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGAT TTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGG TCTGTAGGTGCAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAA ATACTCCAGACATCGTTTGAACTTTCAATAGATGCAACATGTTCTGAATTTCATATGTGG CTGCGACAATCTTTGATGATATCCTATCCTCAAACTGAAACTGGGAACTTTCGAGTTCCA AGATTGCAATTTTATTATGGCTGGATGCATTGTACGGTAAAAAAAAAAAAAAAAA



consensusID : consensus_12191#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 524
fasta sequence
                              [GCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAATGTGTAGATCCTAGGTTAAAGAGTGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATACGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGCAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGTAGCGTATC]

[-] EMBL CF334306             [GCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAATGTGTAGATCCTAGGTTAAAGAGTGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATACGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGCAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGTAGCGTATC]
[+] EMBL C97886               [                                                               TATCCTCCAAAGGGAGTTGCTAAGCTTGCTCCGGTGGCAGCTCTTTGTGTCCAATNCGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAACAAAAACCAGCAGTNCNAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTTAGCTCATGGTAGNCCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATTGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATTTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGTCTGTAGGTGCAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCAaaaa                                                        ]


>consensus_12191#1 GCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAATGTGTAGATCCTAGGTTAAAGAGT GAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATAC GAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCAA CAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGTT AGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAATT GCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGATT TCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGGT CTGTAGGTGCAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAAA AAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGTAGCGTATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12191#0      AATAATCCCCTTCCCCTCCCTAAGGACGGCGGCTTTAACTCGAGCAGGCAACCAGGACGC 60
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GGAGGCTGCGCCACCGCCGCCGCCGCCGCTGCCGCTGCCGGCCACTTCCTCCACCCTCCC 120
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      CTGAGCCTGTGCGCGCCCAAGCTCCACTTCGTCTCGCCTCTGAACCCTAGCTCCCCCTGG 180
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      TGGTGTCTCGAATTCTCTCGTCGCGCCATCGCCATCGAACCCGGCGGTGATTTCGTTTGC 240
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      TTGGTGTTCAAGTTGTGAGGAGACAATATGAGGCAGTGGTTTTGTTGTAATTGCCACTTT 300
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GACGAGGAGGATGACCATGGGAAGGAACGCTCCAATGCTCAGGGCAATAAGATGGATGCC 360
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      AAGCAAAAGTCTTCAAAACCTCCTGCTGGTCAACCTGAACCAGAGATAGCCCCACTTACA 420
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      ATTGATGTCCCTGAGTTGTCACTGGAGGACTTAAAACAAAAAACCGACAATTTTGGATCA 480
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      AATGCTCTGATTGGGTGAAGGTTCATATGGACGAGTATACCATGCCACTTTGGATGATGG 540
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GAGGCAAGCAGCAGTTAAAAAATTGGATGCATCTGAAAATGAGCCTAACGACGAATTCTT 600
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GAAACAGGTCTCCCAGGCATCAAGGCTAAAGCATGAAAATCTTGTGGAGATGTTGGGTTA 660
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      CTGTGTAGAGGGCAATTATCGTATACTGGCATACGAATTTGCGACCATGGGTTCCCTTCA 720
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      TGATGTTCTCCATGGAAGAAAAGGAGTTCAAGGTGCGCAGCCTGGTCCTGTACTTGATTG 780
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GACGCAGAGGGTAAAAATTGCTATAGAGGCAGCAAAAGGCTTAGAGTACCTGCATGAGAA 840
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GGTTCAGCCTTCAATCATTCATCGGGACATCAGATCAAGCAATGTACTTCTGTTTGAGGA 900
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      CTTCAAGGCAAAAATTGCAGATTTCAATCTCTTAAATCAAGCTCCAGATATGGCAGCACG 960
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      CCTTCATTCAACTCGTGTATTAGGAACCTTTGGATATCATGCACCAGAATATGCTATGAC 1020
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      TGGCCAGCTGACGCAGAAGAGTGATGTGTACAGTTTTGGTGTAGTTCTTTTGGAACTCCT 1080
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GACTGGAAGGAAACCAGTGGACCACACAATGCCTCGGGGACAGCAAAGTCTAGTCACTTG 1140
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      GGCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAATGTGTAGATCCTAGGTTAAAGAG 1200
consensus_12191#1      -GCTACTCCTAGATTAAGCGAAGACAAGGTCAAACAATGTGTAGATCCTAGGTTAAAGAG 59
                        ***********************************************************

consensus_12191#0      TGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATA 1260
consensus_12191#1      TGAATATCCTCCAAAGGGAGTTGCTAAGCTTGCTGCGGTGGCAGCTCTTTGTGTCCAATA 119
                       ************************************************************

consensus_12191#0      CGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCA 1320
consensus_12191#1      CGAAGCAGAGTTCAGGCCCAACATGAGCATTGTTGTCAAGGCGCTCTCTCCTCTGCTTCA 179
                       ************************************************************

consensus_12191#0      ACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGT 1380
consensus_12191#1      ACAAAAACCAGCAGTGCCAGCTGCCTCAGAGCCGGCGCCAGCAACTGAGAATTAAGATGT 239
                       ************************************************************

consensus_12191#0      TAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAAT 1440
consensus_12191#1      TAGCTCATGGTAGACCTCCCGGCACATGCCAGTTCGTAATCAGCGCATTCTGTGTGTAAT 299
                       ************************************************************

consensus_12191#0      TGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGAT 1500
consensus_12191#1      TGCAATTGGTTTAAGAAGTTTCTTTTGTGGGGTTCTCTGTTGGATGCAGATCACATGGAT 359
                       ************************************************************

consensus_12191#0      TTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGG 1560
consensus_12191#1      TTCTCTTTGCCTTTTGTTGCTACCTTAGGTTTGCGGTTTGAGATTTGTGCTGTACATTGG 419
                       ************************************************************

consensus_12191#0      TCTGTAGGTGCAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAA 1620
consensus_12191#1      TCTGTAGGTGCAAGAATACTGCTTCCTCTCTTTTCCACAGCTTCACTTCAGAGGTGTCAA 479
                       ************************************************************

consensus_12191#0      ATACTCCAGACATCGTTTGAACTTTCAATAGAT--GCAACATGTTCTGAATTTCATATGT 1678
consensus_12191#1      AAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGTAGCGTATC--------------- 524
                       * *    * * *        *** ***     *  * * * * *                

consensus_12191#0      GGCTGCGACAATCTTTGATGATATCCTATCCTCAAACTGAAACTGGGAACTTTCGAGTTC 1738
consensus_12191#1      ------------------------------------------------------------
                                                                                   

consensus_12191#0      CAAGATTGCAATTTTATTATGGCTGGATGCATTGTACGGTAAAAAAAAAAAAAAAAA 1795
consensus_12191#1      ---------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)