|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12193#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1881 fasta sequence
[GCAAGCAGCTTGAAGCAACCCACCACAGCTTCCTTCTTCCTCTGCTTCAGCAGAGCAGGGGAGCAGAGGAGGGAGAGGTCACTCATTCACAACCTCATACAGAAGGAAGAAGAAGAAGAAGAGAAGAAGATTCACACATACATCTATAGATAAAATATATTTATACATATAGAGAATACTCAGAGAGTAGCCAAGAGAGGAGGAAGAAGAAGATGGTGTTGGTGGCGATTGGGGTGGTTGTGGCGGCGGCGGTGGTGGTGAGCAGCCTGCTGCTGCGGTGGAACGAGGTGCGGTACAGCCGGAAGCGCGGCCTGCCGCCGGGGACAATGGGGTGGCCGCTCTTCGGCGAGACCACCGAGTTCCTCAAGCAGGGACCCAGTTTCATGAAGGCCCGGAGGCTCAGGTACGGGAGCGTGTTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGGCGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGACATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGCGCCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCTCCCTCCTCCCCAAGATCGACGCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGACATCCAGGCCAAGACCAAGGAGATGGCCTTGCTATCTGCACTCAGGCAGATTGCCGGCGTCTCCGCTGGCCCACTCTCTGACGCTCTCAAGGCAGAGCTCTACACCCTTGTGCTTGGCACCATCTCCCTGCCCATCAACCTTCCTGGAACCAACTACTACCAAGGCTTCAAGGCAAGGAAGAAGCTTGTTGCAATGCTAGAGCAGATGATCGCGGAACGGCGATCCTCCGGTCAGGTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATG-CCATCGA-CTGGAATGATTTCAAGTCCA-TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC-TACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCTGATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACACTTCATGCTGTTTGGAGGAGGTAGTCGAATGTGCCCGGGGAAGGAAGTAGGCACCGTAGAAATTGCAACATTCCTTCACTATTTCGTGACTCAATACAGATGGGAGGAAGAAGGTAACAACACAATATTGAAGTTCCCCCGAGTTGAAGCTCCCAACGGGTTACATATCCGCGTTCAAGATTACTGATCCTGGAACATTTTGC-GAAGTTAGATAGGAATTCAAATCAGATAGAAAATAAGAGTGCAATTCTGATGCTGCTGCCCTGATGACAGGATTAGAACAGCCGTTTGGCTCTTGTAACATATGTCCATGAAAATAGGAATATTATAGAGATAATATAGGCATTATAGGACCATTAGGAAGCTAATGTAGATTGCCATCAGATGCTCCTGTATTCTTTTGGTCCATCAATTGTTGAACTAAAACAGAAGTGTCATTTGGCTTC]
[+] EMBL AK101670 [GCAAGCAGCTTGAAGCAACCCACCACAGCTTCCTTCTTCCTCTGCTTCAGCAGAGCAGGGGAGCAGAGGAGGGAGAGGTCACTCATTCACAACCTCATACAGAAGGAAGAAGAAGAAGAAGAGAAGAAGATTCACACATACATCTATAGATAAAATATATTTATACATATAGAGAATACTCAGAGAGTAGCCAAGAGAGGAGGAAGAAGAAGATGGTGTTGGTGGCGATTGGGGTGGTTGTGGCGGCGGCGGTGGTGGTGAGCAGCCTGCTGCTGCGGTGGAACGAGGTGCGGTACAGCCGGAAGCGCGGCCTGCCGCCGGGGACAATGGGGTGGCCGCTCTTCGGCGAGACCACCGAGTTCCTCAAGCAGGGACCCAGTTTCATGAAGGCCCGGAGGCTCAGGTACGGGAGCGTGTTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGGCGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGACATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGCACCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCTCCCTCCTCCCCAAGATCGACGCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGACATCCAGGCCAAGACCAAGGAGATGGCCTTGCTATCTGCACTCAGGCAGATTGCCGGCGTCTCCGCTGGCCCACTCTCTGACGCTCTCAAGGCAGAGCTCTACACCCTTGTGCTTGGCACCATCTCCCTGCCCATCAACCTTCCTGGAACCAACTACTACCAAGGCTTCAAGGCAAGGAAGAAGCTTGTTGCAATGCTAGAGCAGATGATCGCGGAACGGCGATCCTCCGGTCAGGTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC TACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCTGATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACACTTCATGCTGTTTGGAGGAGGTAGTCGAATGTGCCCGGGGAAGGAAGTAGGCACCGTAGAAATTGCAACATTCCTTCACTATTTCGTGACTCAATACAGATGGGAGGAAGAAGGTAACAACACAATATTGGAGTTCCCCCGAGTTGAAGCTCCCAACGGGTTACATATCCGCGTTCAAGATTACTGATCCTGGAACATTTTGC GAAGTTAGATAGGAATTCAAATCAGATAGAAAATAAGAGTGCAATTCTGATGCTGCTGCCCTGATGACAGGATTAGAACAGCCGTTTGGCTCTTGTAACATATGTCCATGAAAATAGGAATATTATAGAGATAATATAGGCATTATAGGACCATTAGGAAGCTAATGTAGATTGCCATCAGATGCTCCTGTATTCTTTTGGTCCATCAATTGTTGAACTAAAACAGAAGTGTCATTTGGCTTC]
[+] EMBL AK072295 [GCAAGCAGCTTGAAGCAACCCACCACAGCTTCCTTCTTCCTCTGCTTCAGCAGAGCAGGGGAGCAGAGGAGGGAGAGGTCACTCATTCACAACCTCATACAGAAGGAAGAAGAAGAAGAAGAGAAGAAGATTCACACATACATCTATAGATAAAATATATTTATACATATAGAGAATACTCAGAGAGTAGCCAAGAGAGGAGGAAGAAGAAGATGGTGTTGGTGGCGATTGGGGTGGTTGTGGCGGCGGCGGTGGTGGTGAGCAGCCTGCTGCTGCGGTGGAACGAGGTGCGGTACAGCCGGAAGCGCGGCCTGCCGCCGGGGACAATGGGGTGGCCGCTCTTCGGCGAGACCACCGAGTTCCTCAAGCAGGGACCCAGTTTCATGAAGGCCCGGAGGCTCAGGTACGGGAGCGTGTTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGGCGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGACATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGCGCCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCTCCCTCCTCCCCAAGATCGACGCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGACATCCAGGCCAAGACCAAGGAGATGGCCTTGCTATCTGCACTCAGGCAGATTGCCGGCGTCTCCGCTGGCCCACTCTCTGACGCTCTCAAGGCAGAGCTCTACACCCTTGTGCTTGGCACCATCTCCCTGCCCATCAACCTTCCTGGAACCAACTACTACCAAGGCTTCAAGGCAAGGAAGAAGCTTGTTGCAATGCTAGAGCAGATGATCGCGGAACGGCGATCCTCCGGTCAGGTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC TACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCTGATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACACTTCATGCTGTTTGGAGGAGGTAGTCGAATGTGCCCGGGGAAGGAAGTAGGCACCGTAGAAATTGCAACATTCCTTCACTATTTCGTGACTCAATACAGATGGGAGGAAGAAGGTAACAACACAATATTGAAGTTCCCCCGAGTTGAAGCTCCCAACGGGTTACATATCCGCGTTCAAGATTACTGATCCTGGAACATTTTGC GAAGTTAGATAGGAATTCAAATCAGATAGAAAATAAGAGTGCAATTCTGATGCTGCTGCCCTGATGACAGGATTAGAACAGCCGTTTGGCTCTTGTAACATATGTCCATGAAAATAGGAATATTATAGAGATAATATAGGCATTATAGGACCATTAGGAAGCTAATGTAGATTGCCATCAGATGCTCCTGTATTCTTTTGGTCCATCAATTGTT ]
[+] EMBL AB084385 [ GTGGCGATTGGGGTGGTTGTGGCGGCGGCGGTGGTGGTGAGCAGCCTGCTGCTGCGGTGGAACGAGGTGCGGTACAGCCGGAAGCGCGGCCTGCCGCCGGGGACAATGGGGTGGCCGCTCTTCGGCGAGACCACCGAGTTCCTCAAGCAGGGACCCAGTTTCATGAAGGCCCGGAGGCTCAGGTACGGGAGCGTGTTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGGCGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGACATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGCGCCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCTCCCTCCTCCCCAAGATCGACGCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGACATCCAGGCCAAGACCAAGGAGATGGCCTTGCTATCTGCACTCAGGCAGATTGCCGGCGTCTCCGCTGGCCCACTCTCTGACGCTCTCAAGGCAGAGCTCTACACCCTTGTGCTTGGCACCATCTCCCTGCCCATCAACCTTCCTGGAACCAACTACTACCAAGGCTTCAAGGCAAGGAAGAAGCTTGTTGCAATGCTAGAGCAGATGATCGCGGAACGGCGATCCTCCGGTCAGGTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC TACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCTGATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACACTTCATGCTGTTTGGAGGAGGTAGTCGAATGTGCCCGGGGAAGGAAGTAGGCACCGTAGAAATTGCAACATTCCTTCACTATTTCGTGACTCAATACAGATGGGAGGAAGAAGGTAACAACACAATATTGAAGTTCCCCCGAGTTGAAGCTCCCAACGGGTTACATATCCGCGTTCA ]
[+] EMBL CF303014 [ CCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGACATCCAGGCCAAGACCAAGGAGATGGCCTTGCTATCTGCACTCAGGCAGATTGCCGGCGTCTCCGCTGGCCCACTCTCTGACGCTCTCAAGGCAGAGCTCTACACCCTTGTGCTTGGCACCATCTCCCTGCCCATCAACCTTCCTGGAACCAACTACTACCAAGGCTTCAAGGCAAGGAAGAAGCTTGTTGCAATGCTAGAGCAGATGATCGCGGAACGGCGATCCTCCGGTCAGGTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCT ]
[+] EMBL CB000799 [ ACACCCTTGTGCTTGGCACCATCTCCCTGCCCATCAACCTTCCTGGAACCAACTACTACCAAGGCTTCAAGGCAAGGAAGAAGCTTGTTGCAATGCTAGAGCAGATGATCGCGGAACGGCGATCCTCCGGTCAGGTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC TACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCTGATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACACTTC ]
[+] EMBL CA999549 [ GATCCTCCGGTCAGGTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTCTGATATCAGGAAAGGTAAAGCGCCCGAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC TACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAA ]
[+] EMBL CB000024 [ gtTACACGACGACATGCTGGATGCGCTCTTGACCGGTGTCCATGGCACCAGGGAGAAGCTCACAGATGAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACGACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGGAAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC TACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCTGATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACACTTCATGCTGTTTGGAGGAGGTAGTCGAATGTGCCCGGGGAAGGAAGTAGGCACCCTAGAAATTGCAACATTCCTTCACTATTTCGTGACTCAATACAGATGGGAGGAAGAAGGTAACAACACAATATTGAAGTTCCCCCGAGTTGAAGCTCCCAACGGGTTACATATCCGCGTTCAAGATTACTGATCCTGGAACATTTTGCGGAAGTTAGATAGGAATTCAAATCATATAGAAAATAAGAGTGGCATTCTGATG ]
[+] EMBL C97147 [ cgTTTTGATATCAGGAAAGGTAAAGCGCCCNAAGATG CCATCGA CTGGAATGATTTCAAGTCCA TGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGC TACAGTTGTNAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTNTACACAAGGGAAATAAATTATGANCCATTCCTGTACCCTGATCCNATGACATTCANTCCATGGAGGTNGCTGGAGAAGAACATGGAATCACATCCACANTT ]
[+] EMBL AU100843 [ GATGCCCATCGACCTGGAATGATTTCAAGTCCATTGACCTTCACTNGAGCTGTTATCTTCGAGACNTTAAGATTAGCTTACAGTTGTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCAAAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCTGATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACACTTCATGCTGTTTGGAGGAGGTAGTCGAATGTGCCCGGGGAAGGAAGTAGGCACCGTAGAAATTGCAACATTCCTTCACTATTTCGTGACTCAATACAGATGGGAGGAAGAAGGTAACAACACAATATTGAAGTTCCCCCGAGTTGAAGCTCCCAACGGGTTACATATCCGCGTTCAAGATTACTGATCCTGGAACATTTTGC GAAGTTAGATAGGAATTCAAATCAGATAGAAAATAAGAGTGCAATTCTGATGCTGCTGCCCTGATGACAGGATTAGAACAGCCGTTTGGCTCTTGTAACATATGTCCATGAAAATAGGAATATTATAGAGATAATATAGGCATTATAGGACCATTAGGAAGCTAATGTAGATTGCCATCAGATGCTCCTGTATTCTTTTGGTCCATCAATTGTTGAACTAAAAa ]
consensusID : consensus_12193#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 604 fasta sequence
[TTGCAGAATCTGTACTACTAGCAGCAGCATTCATCCATCACAATCATTCATTCCTCCATTTCCTTTTATTATCAACGAGAAAACTAATCAAACACTAATACCACTAGCAGTAGCAGCAATAGTAGCAGTAGTACTAAAAGCGAAAGATTTTGCAGGTACGGGAGCGTGTTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGGCGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGACATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGCGCCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCCCCCTCCTCCCCAAGATCGACGCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGACATCCAGGCCAAGACCAAGGAGGCACTCTCTCTGCTTCTACTTCTACTTCTCCTTCTCCTTGCATGCATATCATCGTCTTCTTTTCTTTTCTTGCTTTCGTAAGAAAATCTTGGTCTCTACTACGAGTACTACCCTT]
[-] EMBL AK059331 [TTGCAGAATCTGTACTACTAGCAGCAGCATTCATCCATCACAATCATTCATTCCTCCATTTCCTTTTATTATCAACGAGAAAACTAATCAAACACTAATACCACTAGCAGTAGCAGCAATAGTAGCAGTAGTACTAAAAGCGAAAGATTTTGCAGGTACGGGAGCGTGTTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGGCGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGACATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGCGCCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCCCCCTCCTCCCCAAGATCGACGCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGACATCCAGGCCAAGACCAAGGAGGCACTCTCTCTGCTTCTACTTCTACTTCTCCTTCTCCTTGCATGCATATCATCGTCTTCTTTTCTTTTCTTGCTTTCGTAAGAAAATCTTGGTCTCTACTACGAGTACTACCCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12193#0 GCAAGCAGCTTGAAGCAACCCACCACAGCTTCCTTCTTCCTCTGCTTCAGCAGAGCAGGG 60
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 GAGCAGAGGAGGGAGAGGTCACTCATTCACAACCTCATACAGAAGGAAGAAGAAGAAGAA 120
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 GAGAAGAAGATTCACACATACATCTATAGATAAAATATATTTATACATATAGAGAATACT 180
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 CAGAGAGTAGCCAAGAGAGGAGGAAGAAGAAGATGGTGTTGGTGGCGATTGGGGTGGTTG 240
consensus_12193#1 ---------------------------------------------------------TTG 3
***
consensus_12193#0 TGGCGGCGGCGGTGGTGGTGAGCAGCCTGCTGCTGCGGTGGAACGAGGTGCGGTACAGCC 300
consensus_12193#1 CAGAATCTGTACTACTAGC-AGCAGCATTCATCCATCACAA---------TCATTCATTC 53
* * * * * * ****** * * * * ** *
consensus_12193#0 GGAAGCGCGGCCTGCCGCCGGGGACAATGGGGTGGCCGCTCTT-CGGCGAGACCACCGAG 359
consensus_12193#1 -----CTCCATTTCCTTTTATTATCAACGAGAAAACTAATCAAACACTAATACCACTAGC 108
* * * * *** * * * ** * * *****
consensus_12193#0 TTCCTCAAGCAGGGACCCAGTTTCATGAAGGCCCGGAGGCT---CAGGTACGGGAGCGTG 416
consensus_12193#1 AGTAGCAGCAATAGTAGCAGTAGTACTAAAAGCGAAAGATTTTGCAGGTACGGGAGCGTG 168
** * * **** * ** * ** * ****************
consensus_12193#0 TTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGG 476
consensus_12193#1 TTCAGGACGCACATCCTGGGGTGCCCGACGGTGGTGTGTATGGAGGCGGAGCTGAACCGG 228
************************************************************
consensus_12193#0 CGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGAC 536
consensus_12193#1 CGGGCGCTGGCCAGCGAAGGGCGCGGGTTCGTCCCGGGCTACCCGCAGTCGATGCTGGAC 288
************************************************************
consensus_12193#0 ATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGC 596
consensus_12193#1 ATCCTGGGGCGGAACAACATCGCCGCCGTGCAGGGCCCCCTCCACCGCGCCATGCGCGGC 348
************************************************************
consensus_12193#0 GCCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCTCCCTCCTCCCCAAGATCGAC 656
consensus_12193#1 GCCATGCTCTCCCTCGTCCGCCCCGCCATGATCCGCTCCCCCCTCCTCCCCAAGATCGAC 408
*************************************** ********************
consensus_12193#0 GCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGAC 716
consensus_12193#1 GCCTTCATGCGCTCCCACCTCGCCGCCTGGTCCTCCTCCTCCTCCTCCGCCGTCGTCGAC 468
************************************************************
consensus_12193#0 ATCCAGGCCAAGACCAAGGAGATGGCCTTGCTATCTGCACTCAGGCAGATTGCCGGCGTC 776
consensus_12193#1 ATCCAGGCCAAGACCAAGGAGGCACTCTCTCTGCTTCTACTT---CTACTTCTCCTTCTC 525
********************* ** ** * *** * ** * **
consensus_12193#0 TCCGCTGGCCCACTCTCTGACGCTCTCAAGGCAGAGCTCTACACCCTTGTGCTTGGCACC 836
consensus_12193#1 CTTGCATGCATATCATCGTCTTCTTTTCTTTTCTTGCTTTCGTAAGAAAATCTTGGTCTC 585
** ** * ** ** * *** * ***** *
consensus_12193#0 ATCTCCCTGCCCATCAACCTTCCTGGAACCAACTACTACCAAGGCTTCAAGGCAAGGAAG 896
consensus_12193#1 TACTACGAG--TACTACCCTT--------------------------------------- 604
** * * * * ****
consensus_12193#0 AAGCTTGTTGCAATGCTAGAGCAGATGATCGCGGAACGGCGATCCTCCGGTCAGGTACAC 956
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 GACGACATGCTGGATGCGCTCTTGACCGGTGTCGAGGGCACCAGGGAGAAGCTCACAGAT 1016
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 GAGCAGATCATTGACCTGATCATCACCCTTATATACTCTGGATATGAAACCATGTCGACG 1076
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 ACCTCGATGATGGCTGTCAAGTACCTGTCAGACCATCCCAAAGCTCTTGAGCAACTCAGG 1136
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 AAAGAACATTTTGATATCAGGAAAGGTAAAGCGCCCGAAGATGCCATCGACTGGAATGAT 1196
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 TTCAAGTCCATGACCTTCACTCGAGCTGTTATCTTCGAGACATTAAGATTAGCTACAGTT 1256
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 GTGAATGGGCTGCTGAGGAAAACTACCCAAGATGTTGAAATGAATGGGTATGTTATCCCA 1316
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 AAAGGTTGGAGAATATATGTTTACACAAGGGAAATAAATTATGATCCATTCCTGTACCCT 1376
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 GATCCCATGACATTCAATCCATGGAGGTGGCTGGAGAAGAACATGGAATCACATCCACAC 1436
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 TTCATGCTGTTTGGAGGAGGTAGTCGAATGTGCCCGGGGAAGGAAGTAGGCACCGTAGAA 1496
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 ATTGCAACATTCCTTCACTATTTCGTGACTCAATACAGATGGGAGGAAGAAGGTAACAAC 1556
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 ACAATATTGAAGTTCCCCCGAGTTGAAGCTCCCAACGGGTTACATATCCGCGTTCAAGAT 1616
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 TACTGATCCTGGAACATTTTGCGAAGTTAGATAGGAATTCAAATCAGATAGAAAATAAGA 1676
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 GTGCAATTCTGATGCTGCTGCCCTGATGACAGGATTAGAACAGCCGTTTGGCTCTTGTAA 1736
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 CATATGTCCATGAAAATAGGAATATTATAGAGATAATATAGGCATTATAGGACCATTAGG 1796
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 AAGCTAATGTAGATTGCCATCAGATGCTCCTGTATTCTTTTGGTCCATCAATTGTTGAAC 1856
consensus_12193#1 ------------------------------------------------------------
consensus_12193#0 TAAAACAGAAGTGTCATTTGGCTTC 1881
consensus_12193#1 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||