Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12197 cluster # 12197       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12197#0 length = 1210 sequences # 8  
consensus_12197#1 length = 435 sequences # 2  

consensusID : consensus_12197#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1210
fasta sequence
                              [GCCAAGACGAGCAGCGAGACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGATGAGATGCAGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGGAGAT-CCA-GGAGAATATAGCTTA-CAACTGC-AAAGCTAATGATTTGGGTGTCCTTCC-TCATATCCGGCATACATGGGGAGATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGTATGT-CAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGGGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCA-GGAAC-TCAA-GTG-CCTGTTAA-GTTTCCCA-TTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCTC-TTGTGTACCTCATCTACAC-CA-A-GCA-GTA-GCGAAAATCCA-GTGGATCATCATTAGGGTTAGATTGCTCAAATGGCA-ACA-AAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA-TGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCTGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATACATCGAGAATTATGGATGGATTAGAAACCAGGCAAATGCGCTTGACCATGTATTGATCAATTGATGCTTTTTTTTTTCTTTT]

[+] EMBL AK071165             [GCCAAGACGAGCAGCGAGACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGATGAGATGCAGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCGTGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGGAGAT CCA GGAGAATATAGCTTA CAACTGC AAAGCTAATGATTTGGGTGTCCTTCC TCATATCCGGCATACATGGGGAGATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGTATGT CAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGGGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCA GGAAC TCAA GTG CCTGTTAA GTTTCCCA TTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCTC TTGTGTACCTCATCTACAC CA A GCA GTA GCGAAAATCCA GTGGATCATCATTAGGGTTAGATTGCTCAAATGGCA ACA AAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA TGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCTGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATACATCGAGAATTATGGATGGATTAGAAACCAGGCAAATGCGCTTGACCATGTATTGATCAATTGATGCTTTTTTTTTTCTTTT]
[+] EMBL AK104387             [ CCAAGACGAGCAGCGAGACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGATGAGATGCAGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGGAGAT CCA GGAGAATATAGCTTA CAACTGC AAAGCTAATGATTTGGGTGTCCTTCC TCATATCCGGCATACATGGGGAGATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGTATGT CAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGGGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCA GGAAC TCAA GTG CCTGTTAA GTTTCCCA TTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCTC TTGTGTACCTCATCTACAC CA A GCA GTA GCGAAAATCCA GTGGATCATCATTAGGGTTAGATTGCTCAAATGGCA ACA AAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA TGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCTGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATACATCG                                                                             ]
[+] EMBL AK104778             [ CCAAGACGAGCAGCGAGACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGATGAGATGCAGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGGAGAT CCA GGAGAATATAGCTTA CAACTGC AAAGCTAATGATTTGGGTGTCCTTCC TCATATCCGGCATACATGGGGAGATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGTATGT CAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGGGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCA GGAAC TCAA GTG CCTGTTAA GTTTCCCA TTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCTC TTGTGTACCTCATCTACAC CA A GCA GTA GCGAAAATCCA GTGGATCATCATTAGGGTTAGATTGCTCAAATGGCA ACA AAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA TGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCTGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATACATCG                                                                             ]
[+] EMBL CB671768             [                                  GCCCACCCTCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGATGAGATGCAGGTGGACGCCGATGAGCAGGTGCAGGCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGGAGAT CCA GGAGAATATAGCTTA CAACTGC AAAGCTAATGATTTGGGTGTCCTTCC TCATATCCGGCATACATGGGGAGATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGTATGT CAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGGGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCA GGAAC TCAA GTG CCTGTTAA GTTTCCCA TTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAANAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU101002             [                                                                                                                                                                                                                                                                                                                                                                                                               GGAAGATCCCAGGGAGAATATAGCTTACCAACTGCAAAAGCTAATGATTTGGGTGTCCTTCCTTCATATCCGGCATACATGGGGAGATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGTATGTCCAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGGGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCA GGAAC TCAA GTG CCTGTTAA GTTTCCCA TTTTTCTGATGAGCTGCCGTAGAAGAATTGGTAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCTC TTGTGTACCTCATCTACAC CA A GCA GTA GCGAAAATCCA GTGGATCATCATTAGGGTTAGATTGCTCAAATGGCA ACA AAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA TGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATAaaaaa                                                                                                                                                                 ]
[-] EMBL CB671769             [                                                                                                                                                                                                                                                                                                                                                                                                                                    AGCTTA CAACTGC AAAGCTAATGATTTGGGTGTCCTTCC TCATATCCGGCATACATGGGGAGATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGTATGT CAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGGGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCA GGAAC TCAA GTG CCTGTTAA GTTTCCCA TTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCTC TTGTGTACCTCATCTACAC CA A GCA GTA GCGAAAATCCA GTGGATCATCATTAGGGTTAGATTGCTCAAATGGCA ACA AAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA TGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCTGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATACATCGAGAATTATGGATGGATTAGAAACCAGGCAAATGCGCTTGGCCATGTATTGATCAAaaaaaaga              ]
[+] EMBL BI813566             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAGGGAACTTCAAGGTGCCCTGTTAAGGGTTCCCAGTGTTTCTGATGA CTGCCGTAGAAGAATT GCAAGGACCAGTCCCTCTTCTTCGAAGAATGCGAAAA GCAGGCCTGGAAGTACAGCATCTGGGCGCTC TTGTGTACCTCATCTACAC CA A GCA GTA GCGAAAATCCACGTGGATCATCATTAGGGTTAGATTGCTCAAATGGCACAGACAAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAA AGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA TGGA TTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCTGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATAaaaaaaaa                                                                          ]
[+] EMBL BI813367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    gtTACAGCATCTGGGCGCTCGTTGTGTACCTCATCTACACGCATATGCATGTATGCGAAAATCCA GTGGATCATCATTAGGGTTAGATTGCTCAAATGGCACAGACAAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCTCAAATGGCAAAAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACACTGGA TTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTTTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCTGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATAaaaaaaaa                                                                          ]


>consensus_12197#0 GCCAAGACGAGCAGCGAGACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGG AGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGATGAGA TGCAGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGT TCCCCGGCATGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGC TATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATG GACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGG CATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGGAGATCCAGGAGAATATAG CTTACAACTGCAAAGCTAATGATTTGGGTGTCCTTCCTCATATCCGGCATACATGGGGAG ATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTGT ATGTCAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAGG GCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCAGGAACTC AAGTGCCTGTTAAGTTTCCCATTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGACC AGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCTC TTGTGTACCTCATCTACACCAAGCAGTAGCGAAAATCCAGTGGATCATCATTAGGGTTAG ATTGCTCAAATGGCAACAAAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTCT CAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAACA TGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGTT TTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCCT GTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATACATCGAGAATTA TGGATGGATTAGAAACCAGGCAAATGCGCTTGACCATGTATTGATCAATTGATGCTTTTT TTTTTCTTTT



consensusID : consensus_12197#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 435
fasta sequence
                              [GACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGTATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCT-GGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCAC-TGATTACGA-TGATGGGGGAGATCCA-GGAGAATATAGCTTACAAC-TNCAAAG-TAATGATTT-GGGTGTCCTTCCTCATAT]

[+] EMBL C28567               [GACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGTATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCT GGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCAC TGATTACGA TGATGGGGGAGATCCA GGAGAATATAGCTTACAAC TNCAAAG TAATGATTT GGGTGTCCTT        ]
[+] EMBL C28877               [             ACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCTGGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCACTTGATTACGATTGATTGGGGAGATCCAGGGGGAATATAGCTTACAACTTGCAAAGNTAATGATTTGGGGNGTCCTTCCTCATAT]


>consensus_12197#1 GACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGGAGACCGCCCTCTTCTCC GCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGGTGGACGCCGATGAGCAGGTGCA GTCGGTGCAGTACGAGGAAAGAGCCCACAAGTTCCCCGGCATGGAACTGAAAATAAGGGT ATTCTCAAGTCATCAGCTGAATGCTAACATGCTATGGCCTGGGACGTTCTTATTTGCTGA TTGGCTGGTAAAGAATAAATCGATTCTGCATGGACGGCGGATCCTGGAATTGGGAAGTGG GACGGGAGCTTTGGCCATCTTCCTGCGGAAGGCATTTCAAGTAGACATCACAACCACTGA TTACGATGATGGGGGAGATCCAGGAGAATATAGCTTACAACTNCAAAGTAATGATTTGGG TGTCCTTCCTCATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12197#0      GCCAAGACGAGCAGCGAGACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGG 60
consensus_12197#1      -----------------GACCCAAAGCTGCACAAGCCCACGCCCACGCCTACGCCCATGG 43
                                        *******************************************

consensus_12197#0      AGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGGATGAGA 120
consensus_12197#1      AGACCGCCCTCTTCTCCGCCGCCTCCCTCTTCCGCGACGCCGACGACGACCAGG------ 97
                       ******************************************************      

consensus_12197#0      TGCAGGTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGT 180
consensus_12197#1      -----GTGGACGCCGATGAGCAGGTGCAGTCGGTGCAGTACGAGGAAAGAGCCCACAAGT 152
                            *******************************************************

consensus_12197#0      TCCCCGGCATGGAACTGAAAATAAGGGAATTCTCAAGTCATCAGCTGAATGCTAACATGC 240
consensus_12197#1      TCCCCGGCATGGAACTGAAAATAAGGGTATTCTCAAGTCATCAGCTGAATGCTAACATGC 212
                       *************************** ********************************

consensus_12197#0      TATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATG 300
consensus_12197#1      TATGGCCTGGGACGTTCTTATTTGCTGATTGGCTGGTAAAGAATAAATCGATTCTGCATG 272
                       ************************************************************

consensus_12197#0      GACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGG 360
consensus_12197#1      GACGGCGGATCCTGGAATTGGGAAGTGGGACGGGAGCTTTGGCCATCTTCCTGCGGAAGG 332
                       ************************************************************

consensus_12197#0      CATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGG-AGATCCAGGAGAATATA 419
consensus_12197#1      CATTTCAAGTAGACATCACAACCACTGATTACGATGATGGGGGAGATCCAGGAGAATATA 392
                       ****************************************** *****************

consensus_12197#0      GCTTACAACTGCAAAGCTAATGATTTGGGTGTCCTTCCTCATATCCGGCATACATGGGGA 479
consensus_12197#1      GCTTACAACTNCAAAG-TAATGATTTGGGTGTCCTTCCTCATAT---------------- 435
                       ********** ***** ***************************                

consensus_12197#0      GATCAGTTTCCAGTTCTCATACCAGATTGGGACATTGTTATCGCCAGTGACATTTTATTG 539
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      TATGTCAAACAATATCCAAACCTAACCAGAACATTATCCTTTCTCCTGAAAGAATACAAG 599
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      GGCTGCAGTCAGAATGCTGGTTCAAGTGCCAGTACAGCCATCACGAACAAATCAGGAACT 659
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      CAAGTGCCTGTTAAGTTTCCCATTTTTCTGATGAGCTGCCGTAGAAGAATTGGCAAGGAC 719
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      CAGTCCCTCTTCTTCGAAGAATGCGAAAAGGCAGGCCTGGAAGTACAGCATCTGGGCGCT 779
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      CTTGTGTACCTCATCTACACCAAGCAGTAGCGAAAATCCAGTGGATCATCATTAGGGTTA 839
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      GATTGCTCAAATGGCAACAAAGGCATAAATTCAGTCACAAGCCAGTAAAATGGAATTTTC 899
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      TCAAATGGCAACAGAGGAAGGCCTAAATTCAGTCACACGCCAGTAAAATGGAAAGGAAAC 959
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      ATGGATTTTTTTGGTAGAGCATGAAACTGGTATTTCGTCTTATTTTCCGTTGACATTAGT 1019
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      TTTGACCGAGAATTTATCTTCTATACACCCCTTGTCGCTGATGGGTTTATACTGCTTTCC 1079
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      TGTACACATTCTTATATGTGGAGAAATGGTGAAACACTGAAATGCTATACATCGAGAATT 1139
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      ATGGATGGATTAGAAACCAGGCAAATGCGCTTGACCATGTATTGATCAATTGATGCTTTT 1199
consensus_12197#1      ------------------------------------------------------------
                                                                                   

consensus_12197#0      TTTTTTCTTTT 1210
consensus_12197#1      -----------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)