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Oryza sativa
cluster # 12198 cluster # 12198       Sequences # 10       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12198#0 length = 1842 sequences # 3  
consensus_12198#1 length = 1665 sequences # 4  
 consensus_12198#2 length = 1034 sequences # 2  
consensus_12198#3 length = 414 sequences # 1  
consensusID : consensus_12198#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1842
fasta sequence 
                              [CGCTTCTCCACTCCTCCCTCGCCGCCCTCTCGGCCGCGCCGCCGTCCTCCCGCCGCCGCAGGGCCTTCTTCCATCACTCCTGCCGCCCGCTCCCTTCGTCGGCGGCGGCGGCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGTGAGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGCAGGACCGGTTGATTATGGCGAATGTTTCAGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGAACCGACACGGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGACACACTCCAAACAGTCAGTTGTTACAAGGTCAAATTGATCTTGACGATGCTGGTTATATTTTGGTTGAAGAAGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATGAATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAGATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAAACTCCTCCC-TGACAATATATACGTCTTAAAGATTTAAAAAAA]

[+] EMBL AK068311             [CGCTTCTCCACTCCTCCCTCGCCGCCCTCTCGGCCGCGCCGCCGTCCTCCCGCCGCCGCAGGGCCTTCTTCCATCACTCCTGCCGCCCGCTCCCTTCGTCGGCGGCGGCGGCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGTGAGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGCAGGACCGGTTGATTATGGCGAATGTTTCAGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGAACCGACACGGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGACACACTCCAAACAGTCAGTTGTTACAAGGTCAAATTGATCTTGACGATGCTGGTTATATTTTGGTTGAAGAAGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATGAATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAGATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACGGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAAACTCCTCCC TGACAATATATACGTCTTA              ]
[-] EMBL CB676821             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAGATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAAACTCCTCCCATGACAATATATACGTCTTAAAG           ]
[+] EMBL AU100658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAAACTCCTCCC TGACAATATATACGTCTTAAAGATTTAAAAAAA]




>consensus_12198#0
CGCTTCTCCACTCCTCCCTCGCCGCCCTCTCGGCCGCGCCGCCGTCCTCCCGCCGCCGCA
GGGCCTTCTTCCATCACTCCTGCCGCCCGCTCCCTTCGTCGGCGGCGGCGGCGGCCAAGG
CGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCAT
CAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACA
CTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGG
TTGGTGGCGTTCCTGGTGAGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGT
TTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGT
GGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTG
TTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTG
CTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCAT
GTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAG
GTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATT
TACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGCAGGACCGGTTGATTATGG
CGAATGTTTCAGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGT
GGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGAACCGACAC
GGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGACACACTCCAAA
CAGTCAGTTGTTACAAGGTCAAATTGATCTTGACGATGCTGGTTATATTTTGGTTGAAGA
AGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATGA
ATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAG
ATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGA
GAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAG
GGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATA
TACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGA
TGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGC
AGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCT
CAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAA
ATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATA
CTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGC
CGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGT
AACAGAATATATTCTTTTGCTGTACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAA
ACTCCTCCCTGACAATATATACGTCTTAAAGATTTAAAAAAA

consensusID : consensus_12198#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1665
fasta sequence 
                              [CCCTCTCCTCTACTCCACACCCTCCGCTTCTCCACTCCTCCCTCGCGATGGCGGTCACGCGCCTCGCCGTGGCCGCCGCCCTCTCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGTGGGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGA-TCAGCTACGAGCATCCAAAGCTATGCAGGACCGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGAACCGACACGGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGACACAC-TCCAAACAGTCAGTTGTTACAAGGTCAAA-TTGATCTTGAC-GATGCTGGTTATATTTTGGTTGAAGAAGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATGAATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAGATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAA-TTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGT]

[+] EMBL OSA582621            [CCCTCTCCTCTACTCCACACCCTCCGCTTCTCCACTCCTCCCTCGCGATGGCGGTCACGCGCCTCGCCGTGGCCGCCGCCCTCTCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGTGGGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGA TCAGCTACGAGCATCCAAAGCTATGCAGGACCGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGAACCGACACGGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGACACAC TCCAAACAGTCAGTTGTTACAAGGTCAAA TTGATCTTGAC GATGCTGGTTATATTTTGGTTGAAGAAGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATGAATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAGATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAA TTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGT]
[+] EMBL C26099               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGA TCAGCTACGAGCATCCAAAGCTATGCAGGACCGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGNGAACCGACACGGGAGANGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGGCACACTTCCAAACAGTCAGTTGTT CAAGGNCAAATTTGATCTTGACGGTTGCTGGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB684688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGGACTC TCTACGAGCATCCAAAGCTATGCAGGACCGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGAACCGACACGGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGACACAC TCCAAACAGTCAGTTGTTACAAGGTCAAA TTGATCTTGAC GATGCTGGTTATATTTTGGTTGAAGAAGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATGAATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAGATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAAGACTGTCTCTGGTGTTAAAATGAAGAAGG ATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTTAAAGTGTAATAGTCTTCTTTTGCCCATAC                                                                                              ]
[+] EMBL CF325861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTATATTCTATTCTAAGCAAGGTTATATATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAA TTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTT                                                           ]




>consensus_12198#1
CCCTCTCCTCTACTCCACACCCTCCGCTTCTCCACTCCTCCCTCGCGATGGCGGTCACGC
GCCTCGCCGTGGCCGCCGCCCTCTCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCG
TCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACT
TGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGA
ACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGTGGGCAGCTGA
TGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATC
TCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATG
TTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGA
AATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTG
AAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCAC
TATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTA
TATATTTGACCAAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAG
CATCCAAAGCTATGCAGGACCGAGTACTCAACAATCCCAACATAACAGTACATTTCAATA
CAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGA
GAACCGACACGGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGAC
ACACTCCAAACAGTCAGTTGTTACAAGGTCAAATTGATCTTGACGATGCTGGTTATATTT
TGGTTGAAGAAGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGC
AGGATCATGAATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGT
CGGTGGAAAGATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCG
AAGAAAAGGAGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACA
CAAAGCATAGGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCT
GTGTTCTATATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCA
AGGTTATAGATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATC
CTGAAATAGCAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATA
AAGAAATGCTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCG
AGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCT
TTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTT
TCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGT

consensusID : consensus_12198#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1034
fasta sequence 
                              [ACTCCACACCCTCCGCTTCTCCACTCCTCCCTCGCGATGGCGGTCACGCGCCTCGCCGTGGCCGCCGCCCTCTCGGCCGCGCCGCCGTCCTCCCGCCGCCGCAGGGCCTTCTTCCATCACTCCTGCCGCCCGCTCCCTTCGTCGGCGGCGGCGGCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGTGGGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCNAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGCAGGACCGAGTACTCAGCAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGNACTGACACGGGANNNNAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATNNNACACACTCNNNNCAGTCAGTTGTT-CNNNNTCAAATTGATCTTGANNATGCTGGTNATATTTTGGTT]

[+] EMBL CB676820             [ACTCCACACCCTCCGCTTCTCCACTCCTCCCTCGCGATGGCGGTCACGCGCCTCGCCGTGGCCGCCGCCCTCTCGGCCGCGCCGCCGTCCTCCCGCCGCCGCAGGGCCTTCTTCCATCACTCCTGCCGCCCGCTCCCTTCGTCGGCGGCGGCGGCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGTGGGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCNAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGCAGGACCG                                                                                                                                                                                                                               ]
[+] EMBL CF196485             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGCGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGCAGGACCGAGTACTCAGCAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGNACTGACACGGGANNNNAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATNNNACACACTCNNNNCAGTCAGTTGTTACNNNNTCAAATTGATCTTGANNATGCTGGTNATATTTTGGTT]




>consensus_12198#2
ACTCCACACCCTCCGCTTCTCCACTCCTCCCTCGCGATGGCGGTCACGCGCCTCGCCGTG
GCCGCCGCCCTCTCGGCCGCGCCGCCGTCCTCCCGCCGCCGCAGGGCCTTCTTCCATCAC
TCCTGCCGCCCGCTCCCTTCGTCGGCGGCGGCGGCGGCCAAGGCGTTGCGCGCGTCGGCT
GCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCATCAGATCTTGGCAAGGGA
GTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACACTGCCGCGATTTACGCC
GCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGGTTGGTGGCGTTCCTGGT
GGGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGTTTCCGGATGGCGTCACT
GGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGTGGGGTGCTGAGCTTCAC
CAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTGTTATTCGTAGCAGTGAT
CGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTGCTGCTAAGCGCCTTCGA
TTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCATGTGCAATATGTGATGGA
GCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAGGTGGTGATACAGCTACA
GAGGAAGCTATATATTTGACCNAATATGCACGTCACGTTCATTTACTTGTTCGAAAGGAT
CAGCTACGAGCATCCAAAGCTATGCAGGACCGAGTACTCAGCAATCCCAACATAACAGTA
CATTTCAATACAGAAGCTGTGGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATT
CAACTGAAGAGNACTGACACGGGANNNNAATCAGTTCTTGAGGTGAAAGGTCTATTCTAT
GGCATNNNACACACTCNNNNCAGTCAGTTGTTCNNNNTCAAATTGATCTTGANNATGCTG
GTNATATTTTGGTT

consensusID : consensus_12198#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 414
fasta sequence 
                              [CCCAACGGCGCCGCGGAGCNAAGGATCCAGAAATAGCAGAAGCTGCAGGCATCATGGGNACACCATGNGNTCAATTTTTTAAAAATAAAGAAATGCTCAGGNCTGTCTCTGGTGNTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAAACTCCTCCCTGACAATA]

[+] EMBL AA752031             [CCCAACGGCGCCGCGGAGCNAAGGATCCAGAAATAGCAGAAGCTGCAGGCATCATGGGNACACCATGNGNTCAATTTTTTAAAAATAAAGAAATGCTCAGGNCTGTCTCTGGTGNTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAAACTCCTCCCTGACAATA]




>consensus_12198#3
CCCAACGGCGCCGCGGAGCNAAGGATCCAGAAATAGCAGAAGCTGCAGGCATCATGGGNA
CACCATGNGNTCAATTTTTTAAAAATAAAGAAATGCTCAGGNCTGTCTCTGGTGNTAAAA
TGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACAAATGAGCTGAACCCAACATACGAT
TCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCATACTGACTATTTCTAGCTGCCACCG
TGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGGCCGGGTGTAGTGCGGTTCAAGAGG
AAATTAGCCGGTCGCTCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGT
ACAACAACGTATTGGTCGTTGTCTTGACACCGTGCAAACTCCTCCCTGACAATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12198#0      CGCTTCTCCACTCCTCCCTCGCCGCCCTCTCGGCCGCGCCGCCGTCCTCCCGCCGCCGCA 60
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      GGGCCTTCTTCCATCACTCCTGCCGCCCGCTCCCTTCGTCGGCGGCGGCGGCGGCCAAGG 120
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      CGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCATCCCCGCCTCCAT 180
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      CAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGCCCGGCGGGGTACA 240
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      CTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTCGAAGGCTACCAGG 300
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      TTGGTGGCGTTCCTGGTGAGCAGCTGATGACCACCACCGAGGTGGAGAATTTCCCTGGGT 360
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      TTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAGCAAGCGGAGCGGT 420
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      GGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAGAGCAGACCGTTTG 480
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      TTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATTGCTACTGGTGCTG 540
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      CTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGAGGTATCAGTGCAT 600
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      GTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAGTTCTTGCAGTTGTTGGAG 660
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      GTGGTGATACAGCTACAGAGGAAGCTATATATTTGACCAAATATGCACGTCACGTTCATT 720
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      TACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGCAGGACCGGTTGATTATGG 780
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      CGAATGTTTCAGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGT 840
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------------------------------
consensus_12198#2      -----------------------------ACTCCACACCCTCCGCTTCTCCACTCCTCCC 31
                                                                                   

consensus_12198#0      GGATGTTGTCAGCAATCCCAAAGGCCAGATGTCTGGTATTCAACTGAAGAGAACCGACAC 900
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ------------------------------------CCCTCTCCTCTACTCCACACCCTC 24
consensus_12198#2      TCGCGATGGCGGTCACGCGCCTCGCCGTGGCCGCCGCCCTCTCGGCCGCGCCGCCGTCCT 91
                                                                                   

consensus_12198#0      GGGAGAGGAATCAGTTCTTGAGGTGAAAGGTCTATTCTATGGCATAGGACACACTCCAAA 960
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      CGCTTCTCCAC----TCCTCCCTCGCGATGGCGGTCACGCGCCTCGCCGTGGCCGCCGCC 80
consensus_12198#2      CCCGCCGCCGCAGGGCCTTCTTCCATCACTCCTGCCGCCCGCTCC-CTTCGTCGGCGGCG 150
                                                                                   

consensus_12198#0      CAGTCAGTTGTTACAAGGTCAAATTGATCTTGACGATGCTGGTTATATTTTGGTTGAAGA 1020
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      CTCTCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCA 140
consensus_12198#2      GCGGCGGCCAAGGCGTTGCGCGCGTCGGCTGCCCCCGCCGTCGACGAGGAGGCCCCCGCA 210
                                                                                   

consensus_12198#0      AGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATGA 1080
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      TCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGC 200
consensus_12198#2      TCCCCGCCTCCATCAGATCTTGGCAAGGGAGTGGAGAACTTGGTGATCATAGGCTCTGGC 270
                                                                                   

consensus_12198#0      ATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAAG 1140
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      CCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTC 260
consensus_12198#2      CCGGCGGGGTACACTGCCGCGATTTACGCCGCTCGGGCGAACCTCAAGCCCGTCGTGTTC 330
                                                                                   

consensus_12198#0      ATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGGA 1200
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      GAAGGCTACCAGGTTGGTGGCGTTCCTGGTGGGCAGCTGATGACCACCACCGAGGTGGAG 320
consensus_12198#2      GAAGGCTACCAGGTTGGTGGCGTTCCTGGTGGGCAGCTGATGACCACCACCGAGGTGGAG 390
                                                                                   

consensus_12198#0      GAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATAG 1260
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      AATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAG 380
consensus_12198#2      AATTTCCCTGGGTTTCCGGATGGCGTCACTGGGCCTGATCTCATGGACAAAATGCGGAAG 450
                                                                                   

consensus_12198#0      GGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTATA 1320
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      CAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAG 440
consensus_12198#2      CAAGCGGAGCGGTGGGGTGCTGAGCTTCACCAGGAGGATGTTGAGTTTGTGAATGTGAAG 510
                                                                                   

consensus_12198#0      TACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAGA 1380
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      AGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATT 500
consensus_12198#2      AGCAGACCGTTTGTTATTCGTAGCAGTGATCGTGAGGTGAAATGCCATAGTGTAATCATT 570
                                                                                   

consensus_12198#0      TGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAGC 1440
consensus_12198#3      ----------------------CCCAACGGCGCCG-CGGAGCNAAGGATCCAGAAATAGC 37
consensus_12198#1      GCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGA 560
consensus_12198#2      GCTACTGGTGCTGCTGCTAAGCGCCTTCGATTACCTCGTGAAGATGAATTTTGGAGTAGA 630
                                                  **       *        * **   * * *** 

consensus_12198#0      AGAAGC--TGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATG 1498
consensus_12198#3      AGAAGC--TGCAGGCATCATGGGNACACCATGNGNTCAATTTTTTAAAAATAAAGAAATG 95
consensus_12198#1      GGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAG---TT 617
consensus_12198#2      GGTATCAGTGCATGTGCAATATGTGATGGAGCATCCCCACTATTTAAGGGTCAAG---TT 687
                        * * *  **** *    **  *      *      * * * *****   * ***   * 

consensus_12198#0      CTCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAAC 1558
consensus_12198#3      CTCAGGNCTGTCTCTGGTGNTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAAC 155
consensus_12198#1      CTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGA--AGCTATATATTTGACCAAAT 675
consensus_12198#2      CTTGCAGTTGTTGGAGGTGGTGATACAGCTACAGAGGA--AGCTATATATTTGACCNAAT 745
                       **      ***    **** * * *     *  **  *   *   * ***     * ** 

consensus_12198#0      AAATGAGCTGAACCCAAC-ATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCC 1617
consensus_12198#3      AAATGAGCTGAACCCAAC-ATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCC 214
consensus_12198#1      ATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGC 735
consensus_12198#2      ATGCACGTCACGTTCATTTACTTGTTCGAAAGGATCAGCTACGAGCATCCAAAGCTATGC 805
                       *     *       **   *   * *  ***   * *  *   *   **      *   *

consensus_12198#0      AT-ACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAA--------- 1667
consensus_12198#3      AT-ACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAA--------- 264
consensus_12198#1      AGGACCGAGTACTCAACAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATG 795
consensus_12198#2      AGGACCGAGTACTCAGCAATCCCAACATAACAGTACATTTCAATACAGAAGCTGTGGATG 865
                       *  ** ** ** *      * *** * *    *   ****     ** **          

consensus_12198#0      TTTTCAG-------ATGGGCCGGGTGTAGTGCGGTTCAA--GAGGAAATTAGCCGGTCGC 1718
consensus_12198#3      TTTTCAG-------ATGGGCCGGGTGTAGTGCGGTTCAA--GAGGAAATTAGCCGGTCGC 315
consensus_12198#1      TTGTCAGCAATCCCAAAGGCCAGATGTC-TGGTATTCAACTGAAGAGAACCGACACGGGA 854
consensus_12198#2      TTGTCAGCAATCCCAAAGGCCAGATGTC-TGGTATTCAACTGAAGAGNACTGACACGGGA 924
                       ** ****       *  **** * ***  **   *****  ** **     * *    * 

consensus_12198#0      TCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGG 1778
consensus_12198#3      TCCTATTGAATTCAATCAATGTAACAGAATATATTCTTTTGCTGTACAACAACGTATTGG 375
consensus_12198#1      GAGGAATCAGTTC--TTGAGGTGA-AAGGTCTATTCTATGGC-ATAGGACA-CACTCCAA 909
consensus_12198#2      NNNNAATCAGTTC--TTGAGGTGA-AAGGTCTATTCTATGGC-ATNNNACA-CACTCNNN 979
                           * * * ***  *  * ** * *   * ****** * **  *   *** *       

consensus_12198#0      TCGTTGTCTTGACACCGTGCAAACTCCTCCCTGACAATATATACGTCTTAAAGATTTAAA 1838
consensus_12198#3      TCGTTGTCTTGACACCGTGCAAACTCCTCCCTGACAATA--------------------- 414
consensus_12198#1      ACAGTCAGTTGTTACAAGGTCAAATTGATCTTGACGATGCTGGTTATATTTTGGTTGAAG 969
consensus_12198#2      NCAGTCAGTTGTT-CNNNNTCAAATTGATCTTGANNATGCTGGTNATATTTTGGTT---- 1034
                        *  *   ***   *      ** *    * ***  **                      

consensus_12198#0      AAAA-------------------------------------------------------- 1842
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      AAGGCACAGCAAAAACATCAGTTGATGGTGTATTTGCTGCTGGTGATGTGCAGGATCATG 1029
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      AATGGAGGCAAGCCGTTACTGCAGCTGGATCCGGATGTGTAGCCGCTTTGTCGGTGGAAA 1089
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      GATACTTAGTTGCCAACGACCTTCTTGTTGAATTTCACCAGCCTGTTCGCGAAGAAAAGG 1149
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      AGAAGGAGATTACAGATAGAGATGTCGAGATGGGCTTTGACATTTCTCACACAAAGCATA 1209
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      GGGGACAGTATGCACTCCGCAAAGTATATCATGAAAGTCCAAGGCTTGTCTGTGTTCTAT 1269
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ATACTTCTCCAACATGTGGTCCTTGCAGAACCTTAAAGCCAATTCTAAGCAAGGTTATAG 1329
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ATGAGTACAACGAACACGTTCATTTTGTCGAAATTGACATCGAGGAGGATCCTGAAATAG 1389
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      CAGAAGCTGCAGGCATCATGGGAACACCATGTGTTCAATTTTTTAAAAATAAAGAAATGC 1449
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      TCAGGACTGTCTCTGGTGTTAAAATGAAGAAGGAATATAGGGAGTTTATCGAGTCAAACA 1509
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      AATGAGCTGAACCCAACATACGATTCAAATTTTAAAGTGTAATAGTCTTCTTTTGCCCAT 1569
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------------------------------
consensus_12198#3      ------------------------------------------------------------
consensus_12198#1      ACTGACTATTTCTAGCTGCCACCGTGGTGGCCAATTTTTGGTCAAAAATTTTCAGATGGG 1629
consensus_12198#2      ------------------------------------------------------------
                                                                                   

consensus_12198#0      ------------------------------------
consensus_12198#3      ------------------------------------
consensus_12198#1      CCGGGTGTAGTGCGGTTCAAGAGGAAATTAGCCGGT 1665
consensus_12198#2      ------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)