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Oryza sativa
cluster # 12201 cluster # 12201       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12201#0 length = 1141 sequences # 3  
consensus_12201#1 length = 626 sequences # 1  
consensus_12201#2 length = 625 sequences # 5  
consensus_12201#3 length = 197 sequences # 1  

consensusID : consensus_12201#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1141
fasta sequence
                              [GGGCATCATCTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGGCCGAGGAGGCGCAGCAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACGCGCCGGCCGGGCGCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCGTAAGATTTAAGAACACCCGCCCCCCTTTCTTTTTTCCCCTTGTTAATTGCGTGGATCGCCGTGTGGATTGTGGTAAAAATATAAAATACAATAAGGGCATGTTTAGTTTCCACGTAAAAATTTTACAATAAAGTATTAAATATAAAGTATTAAATATAGGCTAAAAGAATAATTAATTATATAGATTGCGATTAATTTATGAGACGAATCTTTTAAGTCTAATTGCTTCATGATTCGTCCATGTGACCGTAAATATCTACTAATGACTGATTAATTAGGCTTAATAAATTCTGGTTTACTGACGTATTTTATAATTAGTTTTTTTTAGTGCCCGAACACCTCATGCGATACCTTACATAATACTTGATGTGATATGCTAAAATTTTACACCCTTAACCTAAGCACCCCCTAAGCTAATTGCAGAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACAACATTTTCGCAGTCTCCTTGTGTTCTTGGCCATGGCCAAGCTTTGCTTGTAAATTGTAATAAGTTTTCACTTTCAAAAAA]

[+] EMBL AK061025             [GGGCATCATCTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGGCCGAGGAGGCGCAGCAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACGCGCCGGCCGGGCGCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCGTAAGATTTAAGAACACCCGCCCCCCTTTCTTTTTTCCCCTTGTTAATTGCGTGGATCGCCGTGTGGATTGTGGTAAAAATATAAAATACAATAAGGGCATGTTTAGTTTCCACGTAAAAATTTTACAATAAAGTATTAAATATAAAGTATTAAATATAGGCTAAAAGAATAATTAATTATATAGATTGCGATTAATTTATGAGACGAATCTTTTAAGTCTAATTGCTTCATGATTCGTCCATGTGACCGTAAATATCTACTAATGACTGATTAATTAGGCTTAATAAATTCTGGTTTACTGACGTATTTTATAATTAGTTTTTTTTAGTGCCCGAACACCTCATGCGATACCTTACATAATACTTGATGTGATATGCTAAAATTTTACACCCTTAACCTAAGCACCCCCTAAGCTAATTGCAGAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACA                                                                                ]
[+] EMBL CF309170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACAACATTTTCGCAGTCTCCTTGTGTTCTTGGCCATGGCCAAGCTTTGCTTGTAAATTGTAATAAGTTTTCACTTTCAAAAA ]
[-] EMBL CF309169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACAACATTTTCGCAGTCTCCTTGTGTTCTTGGCCATGGCCAAGCTTTGCTTGTAAATTGTAATAAGTTTTCACTTTCAAAAAA]


>consensus_12201#0 GGGCATCATCTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTC GTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGC CGGCGATGGCCGAGGAGGCGCAGCAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACG CGCCGGCCGGGCGCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCG AGCACAACAGCAAGGCCGTAAGATTTAAGAACACCCGCCCCCCTTTCTTTTTTCCCCTTG TTAATTGCGTGGATCGCCGTGTGGATTGTGGTAAAAATATAAAATACAATAAGGGCATGT TTAGTTTCCACGTAAAAATTTTACAATAAAGTATTAAATATAAAGTATTAAATATAGGCT AAAAGAATAATTAATTATATAGATTGCGATTAATTTATGAGACGAATCTTTTAAGTCTAA TTGCTTCATGATTCGTCCATGTGACCGTAAATATCTACTAATGACTGATTAATTAGGCTT AATAAATTCTGGTTTACTGACGTATTTTATAATTAGTTTTTTTTAGTGCCCGAACACCTC ATGCGATACCTTACATAATACTTGATGTGATATGCTAAAATTTTACACCCTTAACCTAAG CACCCCCTAAGCTAATTGCAGAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGG CAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGC GCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTC CAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCT GCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACAT GTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCA TAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACAACATTTTCGCAGTCTCCTT GTGTTCTTGGCCATGGCCAAGCTTTGCTTGTAAATTGTAATAAGTTTTCACTTTCAAAAA A



consensusID : consensus_12201#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 626
fasta sequence
                              [CTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGGCCGAGGAGGCGCAGAGCCACGCGCGTGAAGGTGGGCGGCATCCACGACAGCCGGCCGGGCGCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGTTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTAGTCTGCTACTAGAACATGTTACTGCTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACA]

[+] EMBL OSLNOCI              [CTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGGCCGAGGAGGCGCAGAGCCACGCGCGTGAAGGTGGGCGGCATCCACGACAGCCGGCCGGGCGCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGTTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTAGTCTGCTACTAGAACATGTTACTGCTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACA]


>consensus_12201#1 CTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTC GTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGG CCGAGGAGGCGCAGAGCCACGCGCGTGAAGGTGGGCGGCATCCACGACAGCCGGCCGGGC GCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCA AGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCG GGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACG AGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCC TCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGTTGAATCATCGGCTT AAAGCAGAGCCATCCAGTGATCCAATTAGTCTGCTACTAGAACATGTTACTGCTCTTGCT GGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCAC TTCTGTATTTCCTAGTGCAATACACA



consensusID : consensus_12201#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 625
fasta sequence
                              [TCATCTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGGCCGAGGAGGCGCAGCAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACGCGCCGGCCGGGCGCGAGAACGACCTCA-CCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTAAAAAAAAAAAAA]

[+] EMBL AK059563             [TCATCTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGGCCGAGGAGGCGCAGCAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACGCGCCGGCCGGGCGCGAGAACGACCTCA CCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATA                       ]
[+] EMBL C72483               [       TCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCGATGGCCGAGGAGGCGCA NAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACGCGCCGGCCGGGCGNANGAACGACCTCA CCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCANCGTCGAAGTGAAGGAACCCGGCGGCG CAATAAGCTGTACGANGCCA                                                                                                                                                                                                                                                            ]
[+] EMBL AU172525             [                                                                                                                                                                                           GCGAGAACGACCTCACCCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTAAAAAAAAAAAAA]
[+] EMBL CF589213             [                                                                                                                                                                                                                 TCGAGCTCGCCCGGTTCGCCGTCGCCGAGCACAACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATA                       ]
[+] EMBL CF302636             [                                                                                                                                                                                                                                                                                                                                                                 ctAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACAT                        ]


>consensus_12201#2 TCATCTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGT CCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGCCGGCG ATGGCCGAGGAGGCGCAGCAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACGCGCCG GCCGGGCGCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCGAGCAC AACAGCAAGGCCAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAGGCAGCAGGTG GTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGGCGCCAATAAG CTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCTCCAGGATTTC AAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGCTGCTGAATCA TCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGT CTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACA TATCACTTCTGTAAAAAAAAAAAAA



consensusID : consensus_12201#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 197
fasta sequence
                              [TGGACTGAAGAGTAGAAAATATATATATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACAC]

[+] EMBL CF313599             [TGGACTGAAGAGTAGAAAATATATATATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACAC]


>consensus_12201#3 TGGACTGAAGAGTAGAAAATATATATATCGTCCGGCTGCTGAATCATCGGCTTAAAGCAG AGCCATCCAGTGATCCAATTATCTGCTACTAGAACATGTTACTGGTCTTGCTGGAAGGTG TAATATGATGAATAAAACCTGCTGCTTTGCCGGGTCATAATAGACATATCACTTCTGTAT TTCCTAGTGCAATACAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12201#0      GGGCATCATCTCTCTTCGCGGAATCGGTGTTCACTACATCTGCTGCTGCTGGTCGTCGTC 60
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ------------------------------------------------------------
consensus_12201#2      ------------------------------------------------------------
                                                                                   

consensus_12201#0      GTTGTCCTCGTCTCGCCGCCGTTCCCGTTACCCTCTTCTTCTCCACCGGTCGCGGCTCGC 120
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ------------------------------------------------------------
consensus_12201#2      ------------------------------------------------------------
                                                                                   

consensus_12201#0      CGGCGATGGCCGAGGAGGCGCAGCAGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACG 180
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ------------------------------------------------------------
consensus_12201#2      ------------------------------------------------------------
                                                                                   

consensus_12201#0      CGCCGGCCGGGCGCGAGAACGACCTCACCACCGTCGAGCTCGCCCGGTTCGCCGTCGCCG 240
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ------------------------------------------------------------
consensus_12201#2      ------------------------------------------------------------
                                                                                   

consensus_12201#0      AGCACAACAGCAAGGCCGTAAGATTTAAGAACACCCGCCCCCCTTTCTTTTTTCCCCTTG 300
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ------------------------------------------------------------
consensus_12201#2      ------------------------------------------------------------
                                                                                   

consensus_12201#0      TTAATTGCGTGGATCGCCGTGTGGATTGTGGTAAAAATATAAAATACAATAAGGGCATGT 360
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ------------------------------------------------------------
consensus_12201#2      ------------------------------------------------------------
                                                                                   

consensus_12201#0      TTAGTTTCCACGTAAAAATTTTACAATAAAGTATTAAATATAAAGTATTAAATATAGGCT 420
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      -------------------------------------------------CTCTCTTCGCG 11
consensus_12201#2      ---------------------------------------------TCATCTCTCTTCGCG 15
                                                                                   

consensus_12201#0      AAAAGAATAATTAATTATATAGATTGCGATTAATTTATGAGACGAATCTTTTAAGTCTAA 480
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      GAATCGGTG-TTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTC----GTCTCG 66
consensus_12201#2      GAATCGGTG-TTCACTACATCTGCTGCTGCTGGTCGTCGTCGTTGTCCTC----GTCTCG 70
                                                                                   

consensus_12201#0      TTGCTTCATGATTCGTCCATGTGACCGTAAATATCTACTAATGACTGATTAATTAGGCTT 540
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      CCGCCGTTCCCGTTACCCTCTTCTTCTCCA----CCGGTCGCGGCTCGCCGGCGATGGCC 122
consensus_12201#2      CCGCCGTTCCCGTTACCCTCTTCTTCTCCA----CCGGTCGCGGCTCGCCGGCGATGGCC 126
                                                                                   

consensus_12201#0      AATAAATTCTGGTTTACTGACGTA-TTTTATAATTAGTTTTTTTTAGTGCCCGAACACCT 599
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      GAGGAGGCGCAG---AGCCACGCG-CGTGAAGGTGGGCGGCATCCACGACA-GCCGGCCG 177
consensus_12201#2      GAGGAGGCGCAGC--AGCCACGCGGCGTGAAGGTGGGCGGCATCCACGACGCGCCGGCCG 184
                                                                                   

consensus_12201#0      CATGCGATACCTTACATAATACTTGATGTGATATGCTAAAATTTTACACCCTTAACCTAA 659
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      GGCGCGAGAACGACCTCACCACC------GTCGAGCTCGCCCGGTTCGCCGTCGCCGAGC 231
consensus_12201#2      GGCGCGAGAACGACCTCACCACC------GTCGAGCTCGCCCGGTTCGCCGTCGCCGAGC 238
                                                                                   

consensus_12201#0      GCACCCCCTAAGCTAATTGCAGAACGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAG 719
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ACAACAGCAAGGCCAA--------CGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAG 283
consensus_12201#2      ACAACAGCAAGGCCAA--------CGCGATGTTGGAGTTGGAGAGGGTGGTGAAGGTGAG 290
                                                                                   

consensus_12201#0      GCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGG 779
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      GCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGG 343
consensus_12201#2      GCAGCAGGTGGTGGGCGGGTTCATGCACTACCTCACCGTCGAGGTGAAGGAACCCGGCGG 350
                                                                                   

consensus_12201#0      CGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCT 839
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      CGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCT 403
consensus_12201#2      CGCCAATAAGCTGTACGAGGCCAAGGTGTGGGAGAGGGCGTGGGAGAACTTCAAGCAGCT 410
                                                                                   

consensus_12201#0      CCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGC 899
consensus_12201#3      ---------------------TGGACTGAAGAGTAGAAAATATATA---TATCGTCCGGC 36
consensus_12201#1      CCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGC 463
consensus_12201#2      CCAGGATTTCAAGCCCCTCGACGACGCCACCGCCTAAACGTACATAGATCATCGTCCGGC 470
                                             *     *       **  ** ***    **********

consensus_12201#0      TGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTA-TCTGCTACTAGAAC 958
consensus_12201#3      TGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTA-TCTGCTACTAGAAC 95
consensus_12201#1      TGTTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTAGTCTGCTACTAGAAC 523
consensus_12201#2      TGCTGAATCATCGGCTTAAAGCAGAGCCATCCAGTGATCCAATTA-TCTGCTACTAGAAC 529
                       ** ****************************************** **************

consensus_12201#0      ATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGT 1018
consensus_12201#3      ATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGT 155
consensus_12201#1      ATGTTACTGCTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGT 583
consensus_12201#2      ATGTTACTGGTCTTGCTGGAAGGTGTAATATGATGAATAAAACCTGCTGCTTTGCCGGGT 589
                       ********* **************************************************

consensus_12201#0      CATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACAACATTTTCGCAGTCTCC 1078
consensus_12201#3      CATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACAC------------------ 197
consensus_12201#1      CATAATAGACATATCACTTCTGTATTTCCTAGTGCAATACACA----------------- 626
consensus_12201#2      CATAATAGACATATCACTTCTGTAAAAAAAAAAAAA------------------------ 625
                       ************************      *    *                        

consensus_12201#0      TTGTGTTCTTGGCCATGGCCAAGCTTTGCTTGTAAATTGTAATAAGTTTTCACTTTCAAA 1138
consensus_12201#3      ------------------------------------------------------------
consensus_12201#1      ------------------------------------------------------------
consensus_12201#2      ------------------------------------------------------------
                                                                                   

consensus_12201#0      AAA 1141
consensus_12201#3      ---
consensus_12201#1      ---
consensus_12201#2      ---
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)