cluster # 1223

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Oryza sativa
cluster # 1223 cluster # 1223 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1223#0 length = 507 sequences # 2

consensusID : consensus_1223#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 507
fasta sequence

                              [TTTTTTTTTTTTTTTTAGCACATTTTTCCCATCATTATCTTTCTCCAGCCATCACAAAGCAAATTAATATCGTTCCAAACATTTAAGGAGCTCATGAATCCAATATTTCGGAGGTTTTTTTAAAAGGACTCATCTCAACATCCATAACAAGCATTTTTTTTTTGTTTCCGACACCATTTTTTGACCATATCGAGTCAATTTATATTTTTAGACTAGACCAAAAATACGGCGGACTGCATAGATAAAACATCAGTGTCGAGCAAAAGGAACCGCTCAGCACTTGACCTCCTTCAGCCCATGAGAGAAGTAAAGGAAGGTTGGGTCGGTGGCTCCGTCCTTGTAGTAGGCAAACACCAAGCC-GCCATCATCATGCATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAAGTACTTGGTGGCACCCTCAATGTTCTTCTTG-ATTCCTCATTGCTTTTCCTGCATCCAGCTTTGGCGGAGAGTGTTCTTGATTGTAGC]

[+] EMBL CF279186             [TTTTTTTTTTTTTTTTAGCACATTTTTCCCATCATTATCTTTCTCCAGCCATCACAAAGCAAATTAATATCGTTCCAAACATTTAAGGAGCTCATGAATCCAATATTTCGGAGGTTTTTTTAAAAGGACTCATCTCAACATCCATAACAAGCATTTTTTTTTTGTTTCCGACACCATTTTTTGACCATATCGAGTCAATTTATATTTTTAGACTAGACCAAAAATACGGCGGACTGCATAGATAAAACATCAGTGTCGAGCAAAAGGAACCGCTCAGCACTTGACCTCCTTCAGCCCATGAGAGAAGTAAAGGAAGGTTGGGTCGGTGGCTCCGTCCTTGTAGTAGGCAAACACCAAGCC GCCATCATCATGCATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAAGTACTTGGTGGCACCCTCAATGTTCTTCTTG ATTCC                                                   ]
[-] EMBL BI797834             [                                                                                                                                                                                                                                    ggGGACTGCATAGATAAAACATCCGTGTCGAGCAGAAGGAACCG TCAGCACTTGACCTCCTTCAGCCCATGAGAGAAGTAAAGGAAGGTTGGGTCGGGGGCTCCGTCCTTGTAGTAGGCAAACACCAAGCCTGCCATCATCATGCATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAAGTACTTGG GGGACCCTCAAGGTTCTTCTTGAATTCCTCATTGCTTTTCCTGCATCCAGCTTTGGCGGAGAGTGTTCTTGATTGTAGC]




>consensus_1223#0
TTTTTTTTTTTTTTTTAGCACATTTTTCCCATCATTATCTTTCTCCAGCCATCACAAAGC
AAATTAATATCGTTCCAAACATTTAAGGAGCTCATGAATCCAATATTTCGGAGGTTTTTT
TAAAAGGACTCATCTCAACATCCATAACAAGCATTTTTTTTTTGTTTCCGACACCATTTT
TTGACCATATCGAGTCAATTTATATTTTTAGACTAGACCAAAAATACGGCGGACTGCATA
GATAAAACATCAGTGTCGAGCAAAAGGAACCGCTCAGCACTTGACCTCCTTCAGCCCATG
AGAGAAGTAAAGGAAGGTTGGGTCGGTGGCTCCGTCCTTGTAGTAGGCAAACACCAAGCC
GCCATCATCATGCATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAA
GTACTTGGTGGCACCCTCAATGTTCTTCTTGATTCCTCATTGCTTTTCCTGCATCCAGCT
TTGGCGGAGAGTGTTCTTGATTGTAGC

clustalw multiple alignements is not computed in this case