cluster # 12235

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Oryza sativa
cluster # 12235 cluster # 12235 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12235#0 length = 1077 sequences # 5

consensus_12235#1 length = 554 sequences # 4
consensus_12235#2 length = 191 sequences # 1

consensusID : consensus_12235#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1077
fasta sequence

                              [ATTCCATTCCCGGATTGCGCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTAGAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGCGAAGGCCGCGGTCGGCGGCGTGGGCGTGGGGGGTTCGTACGCGGTGCTGCAGTGCGGGGAGGACTCGGAGTACGTGAGGAAGGCGTACGGGGGCTACTTCGAGGTGTTCAGGGCGCTGCTGGCGGAGGACGGCGAGCGGTGGCGGGTGTACCGCGCCGTGCGCGGGGAGCTCCCCGGGGAGGAGGAGGCCGCGGGGATCGACGGGTTCGTCATCTCCGGGAGCTGCAGCGACGCCCACGCCGACGACCCGTGGATCGTCGCCCTCGTCGACCTCATCCGCCGCCAGAACGCCGCCGGCAAGCGCATCCTCGGCGTCTGC-TTCGGCCACCAGGTCCTGTGCCGAGCGCTGGGCGGCAAGACGGGCCGATCGAAGAAGGGCTGGGACATCGGCGTGAAC-TGCATCCACCCCACCGC-GGCCATGGCGAGGCTCTTTTCGCCGATCAAGCTCCCCGTCCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGAGCTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGCGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATCTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGG-AAAAAAACTATTTATTCGGAGCAATAATAAGAGAGTAATTGGGGGTGGCCTAATTAGCAAAAGAAAGAAA]

[+] EMBL AK071046             [ATTCCATTCCCGGATTGCGCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTAGAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGCGAAGGCCGCGGTCGGCGGCGTGGGCGTGGGGGGTTCGTACGCGGTGCTGCAGTGCGGGGAGGACTCGGAGTACGTGAGGAAGGCGTACGGGGGCTACTTCGAGGTGTTCAGGGCGCTGCTGGCGGAGGACGGCGAGCGGTGGCGGGTGTACCGCGCCGTGCGCGGGGAGCTCCCCGGGGAGGAGGAGGCCGCGGGGATCGACGGGTTCGTCATCTCCGGGAGCTGCAGCGACGCCCACGCCGACGACCCGTGGATCGTCGCCCTCGTCGACCTCATCCGCCGCCAGAACGCCGCCGGCAAGCGCATCCTCGGCGTCTGC TTCGGCCACCAGGTCCTGTGCCGAGCGCTGGGCGGCAAGACGGGCCGATCGAAGAAGGGCTGGGACATCGGCGTGAAC TGCATCCACCCCACCGC GGCCATGGCGAGGCTCTTTTCGCCGATCAAGCTCCCCGTCCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGAGCTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGCGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATCTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAAGGCGGCGCAGCTGGAGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGG AAAAAAACTATTTATTCGGAGCAATAATAAGAGAGTAATTGGGGGTGG                      ]
[+] EMBL OSS14689A            [ATTCCATTCCCGGATTGNNCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTAGAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGCGAAGGCCNGNNTCGGCGGCGTGGGCGTGGGGGGTTCGTACNCGGTGCTGCAGTNCGGGGAGGACTCGGAGTACGTGAGGAAGGCGTACGGGGGCTACTTCGAGGTGTTCAGGGNGCTNCTGGCGGAGGACGGCGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU101379             [                                                                                                                                                                                                                                                                                                                                                                                      CATCCGCCGCCAGAACGCCGCCGGCAAGCGCATCCTCGGCGTCTGC TTCGGCCACCAGGTCCTGTGCCGAGCGCTGGGCGGCAAGACGGGCCGATCGAAGAAGGGCTGGGACATCGGCGTGAAC TGCATCCACCCCACCGC GGCCATGGCGAGGCTCTTTTCGCCGATCAAGCTCCCCGTCCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGAGCTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGCGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATCTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTC                                                                                                                                                                                                                          ]
[-] EMBL CB633618             [                                                                                                                                                                                                                                                                                                                                                                                                 AGAACGCCGCCGGCAAGCGCATCCTCGGCGTCTGC TTCGGCCACCAGGTCCTGTGCCGAGCGCTGGGCGGCAAGACTGGCCGATCGAAGAAGGGCTGGGACATCGGCGTGAAC TGCATCCACCCCACCGC GGCCATGGCGAGGCTCTTTTCGCCGATCAAGCTCCCCGTCCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGAGCTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGAGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAAACTATTTATTCGGAGCAATGATAAGAGAGTAATTGGGGGTGGCCTAATTAGCAAAAGAAAGA  ]
[+] EMBL AU101380             [                                                                                                                                                                                                                                                                                                                                                                                                           gGGCAAGGGCATCCTCGGCGTCTGCTTTCGGCCACCAGGTCNTGTGCCAAGCGNTGGNCGGCAAGACGGGCCGATCGAAGAAGGGCTGGGACATCGGCGTGAACTTGCATCCACCCCACCGCGGGCCATGGCGAGGCTCTTTTCGCCGATCAAGCTCCCCGTCCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGAGCTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGCGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATCTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGG AAAAAAACTATTTATTCGGAGCAATAATAAGAGAGTAATTGGGGGTGGCCTAATTAGCAAAAAAAAAAAA]




>consensus_12235#0
ATTCCATTCCCGGATTGCGCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTA
GAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGCGAAGGCCGCGGTCGGCGGC
GTGGGCGTGGGGGGTTCGTACGCGGTGCTGCAGTGCGGGGAGGACTCGGAGTACGTGAGG
AAGGCGTACGGGGGCTACTTCGAGGTGTTCAGGGCGCTGCTGGCGGAGGACGGCGAGCGG
TGGCGGGTGTACCGCGCCGTGCGCGGGGAGCTCCCCGGGGAGGAGGAGGCCGCGGGGATC
GACGGGTTCGTCATCTCCGGGAGCTGCAGCGACGCCCACGCCGACGACCCGTGGATCGTC
GCCCTCGTCGACCTCATCCGCCGCCAGAACGCCGCCGGCAAGCGCATCCTCGGCGTCTGC
TTCGGCCACCAGGTCCTGTGCCGAGCGCTGGGCGGCAAGACGGGCCGATCGAAGAAGGGC
TGGGACATCGGCGTGAACTGCATCCACCCCACCGCGGCCATGGCGAGGCTCTTTTCGCCG
ATCAAGCTCCCCGTCCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGAGCTG
CCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTC
GGCGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAGC
ATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAG
GCGAGCTTCGACTTGCGGCAACCAGACAAGGATCTGTGGAAGAAGGTGTGCAGGGGTTTT
CTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAG
AAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGCAT
TGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAACTATTT
ATTCGGAGCAATAATAAGAGAGTAATTGGGGGTGGCCTAATTAGCAAAAGAAAGAAA

consensusID : consensus_12235#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 554
fasta sequence

                              [CTCTTTTCCCGATCAAGCTCCCCGTGCCACATGCCCATCA-TC-GAGTTCCA-CCAAGATGAGGTGTGGGACTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGAGACCGCGCCATGGGC-GTCCAGGGCCACCCGGAG-TACAG-CAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAAACTATTTATTCGGACCAATAATAAGAGAGTAATT-GGGGTGCCCTAATTACCAAATCCCATTTGCCAAAA]

[+] EMBL BI798075             [CTCTTTTCCCGATCAAGCTCCCCGTGCCACATGCCCATCA TC GAGTTCCACCCAAGATGAGGTGTGGGACTGCCTCCTCA GCCGAGGT CTGGC CGTTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGAGACCGCGCCATGGGC GTCCAGGGCCACCCGGAG TACAG CAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGTCCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAA GCGGCCCAGCCCCTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGCCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAAACTATTTATTCGGCCCAATAATAAGAGAGTAATT  GGGCCCCCT ATTACCCAATCCCATTTGCCAAAA]
[+] EMBL BI799626             [               AGCTCCCCGT CCACATGCCCATCA TC GAGTTCCA CCAAGATGAGGTGTGGGACTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGAGACCGCGCCATGGGC GTCCAGGGCCACCCGGAG TACAG CAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAAACTATTTATTCGGAGCAATAATAAGAGAGTAATTGGGGGTGGCCTAATTAGCAAATCCCATTTGCCAAAA]
[+] EMBL BI796539             [                                    ATCATTCGGAGTTCCA CCAAGATGA GTGTGGGACTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCTCGGAGACCGCGCCATGGGCAGTCCAGGGCCACCCGGAGTTACAG CAAGGACATCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGTGCA GGGTTTTCTGAAGGGGAGGCT                                                                                                                                                                                                                                      ]
[+] EMBL BI799261             [                                                                                                                         GATGTTCCGTCTCGGAGACCGCCCCATGGGC GTCCAGGCCCACCCGGAG TACAGCCAAGGACATCCTCATGAGCATC CCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGGATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGTGCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGCAGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGAT GGGGCATTGGGGA CCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAAACTATTTATTCGGACC ATAATAAGAGAGTAATT GGGGTGCCCTAATTA CAAATCCCA TTGCCAAAA]




>consensus_12235#1
CTCTTTTCCCGATCAAGCTCCCCGTGCCACATGCCCATCATCGAGTTCCACCAAGATGAG
GTGTGGGACTGCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGA
TGTTCCGTCTCGGAGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACA
TCCTCATGAGCATCGCCGACCGTCTCCTCCGGAACGATCTCATCCTGGATCACCAGGTGG
ATAAGGCGAAGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGT
GCAGGGGTTTTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATC
AGAAGCAGCAGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCA
GATGGGGGCATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAA
AAAAAACTATTTATTCGGACCAATAATAAGAGAGTAATTGGGGTGCCCTAATTACCAAAT
CCCATTTGCCAAAA

consensusID : consensus_12235#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 191
fasta sequence

                              [ATTCCATTCCCGGATTGNGCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTAGAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGNGAAGGCCNTAGTCGNNGGTGTAGGCTTNNGAGGTTCGTACGNGTTACTGCAGTNCGGGGAGGACTCGGAGTACGTAAGGAAGGCGTACGG]

[+] EMBL OSS10787A            [ATTCCATTCCCGGATTGNGCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTAGAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGNGAAGGCCNTAGTCGNNGGTGTAGGCTTNNGAGGTTCGTACGNGTTACTGCAGTNCGGGGAGGACTCGGAGTACGTAAGGAAGGCGTACGG]




>consensus_12235#2
ATTCCATTCCCGGATTGNGCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTA
GAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGNGAAGGCCNTAGTCGNNGGT
GTAGGCTTNNGAGGTTCGTACGNGTTACTGCAGTNCGGGGAGGACTCGGAGTACGTAAGG
AAGGCGTACGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12235#0      ATTCCATTCCCGGATTGCGCCGCCGCCGGTGTTGCAGCAGCCATGGGGATGGGGCCACTA 60
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      GAGAACGCCGTGGTGGACGCGGCGGCGGAGGCCGTGGCGGCGAAGGCCGCGGTCGGCGGC 120
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      GTGGGCGTGGGGGGTTCGTACGCGGTGCTGCAGTGCGGGGAGGACTCGGAGTACGTGAGG 180
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      AAGGCGTACGGGGGCTACTTCGAGGTGTTCAGGGCGCTGCTGGCGGAGGACGGCGAGCGG 240
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      TGGCGGGTGTACCGCGCCGTGCGCGGGGAGCTCCCCGGGGAGGAGGAGGCCGCGGGGATC 300
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      GACGGGTTCGTCATCTCCGGGAGCTGCAGCGACGCCCACGCCGACGACCCGTGGATCGTC 360
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      GCCCTCGTCGACCTCATCCGCCGCCAGAACGCCGCCGGCAAGCGCATCCTCGGCGTCTGC 420
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      TTCGGCCACCAGGTCCTGTGCCGAGCGCTGGGCGGCAAGACGGGCCGATCGAAGAAGGGC 480
consensus_12235#1      ------------------------------------------------------------
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      TGGGACATCGGCGTGAACTGCATCCACCCCACCGCGGCCATGGCGAGGCTCTTTTCGCCG 540
consensus_12235#1      ------------------------------------------------CTCTTTTC-CCG 11
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      ATCAAGCTCCCCGT-CCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGAGCT 599
consensus_12235#1      ATCAAGCTCCCCGTGCCACATGCCCATCATCGAGTTCCACCAAGATGAGGTGTGGGA-CT 70
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      GCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCT 659
consensus_12235#1      GCCTCCTCAGGCCGAGGTGCTGGCGCGGTCGGACATGACCGGCGTCGAGATGTTCCGTCT 130
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      CGGCGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAG 719
consensus_12235#1      CGGAGACCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACATCCTCATGAG 190
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      CATCGCCGACCGTCTCCTCCGGAACGATCTCAT-CCTGGATCACCAGGTGGATAAGGCGA 778
consensus_12235#1      CATCGCCGACCGTCTCCTCCGGAACGATCTCAT-CCTGGATCACCAGGTGGATAAGGCGA 249
consensus_12235#2      --------------------------ATTCCATTCCCGGATTGNGCCGCCGCCGGTGTTG 34
                                                 **  *** ** ****      *  *     *   

consensus_12235#0      AGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATCTGTGGAAGAAGGTGTGCAGGGGTT 838
consensus_12235#1      AGGCGAGCTTCGACTTGCGGCAACCAGACAAGGATTTGTGGAAGAAGGTGTGCAGGGGTT 309
consensus_12235#2      CAGCAGCCATGGGGATGGGGCCACTAGAGAACG--CCGTGGTGGACGCGGCGGCGGAGGC 92
                         **   * * *   ** *** ** *** ** *    ****  ** *  * *  ** *  

consensus_12235#0      TTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGC 898
consensus_12235#1      TTCTGAAGGGGAGGCTTCAGTCATCGCAGCAGCCGCAGCAGCAGCAACATCAGAAGCAGC 369
consensus_12235#2      CGTGGCGGNGAAGGCCNTAGTCGNNGGTGTAGGCTTNNGAG-GTTCGTACGNGTTACTGC 151
                           *  * * ****   ****   *  * ** *     **       *   *   * **

consensus_12235#0      AGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGC 958
consensus_12235#1      AGAAGGCGGCGCAGCTGGTGCTATAGTAAACAAGATTAGTGAGTGAGATCAGATGGGGGC 429
consensus_12235#2      AGTNCGGGGAGGACTCGGAG-TAC-GTAAGGAAGGCGTACGG------------------ 191
                       **   * ** * *   ** * **  ****  ***      *                   

consensus_12235#0      ATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAA-CTA 1017
consensus_12235#1      ATTGGGGAGCCTAGATTAATCCTTATTTTCTGCTTCAGATTTGTACAGGAAAAAAAACTA 489
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      TTTATTCGGAGCAATAATAAGAGAGTAATTGGGGGTGGCCTAATTAGCAAAAGAAAGAAA 1077
consensus_12235#1      TTTATTCGGACCAATAATAAGAGAGTAATTGGGG-TGCCCTAATTACCAAATCCCATTTG 548
consensus_12235#2      ------------------------------------------------------------
                                                                                   

consensus_12235#0      ------
consensus_12235#1      CCAAAA 554
consensus_12235#2      ------