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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12247#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1429 fasta sequence
[CGGAGACGTCGCGCGCGGCGCGCCATATCCTGCTCGCGTTTCCCCGGTTTTTCGTATTAAAACCAACGGCGCGCCGCCGCCAGACGACCGGACAGAGTGCTCGCTCGCTGCTGTCTCTTCGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGATCGATCGGTCACTCTCTGTCTTCCCCATATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGCCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCTCGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACGGCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCGCCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGGGGTGGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCATGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCGTTTTATGTGGTTTTCTGTACGGTTTTCTATAAATGTATAGTGTGTCTCGTTTTATGCATGGTTACCTGCACTTGA]
[+] EMBL AK071937 [CGGAGACGTCGCGCGCGGCGCGCCATATCCTGCTCGCGTTTCCCCGGTTTTTCGTATTAAAACCAACGGCGCGCCGCCGCCAGACGACCGGACAGAGTGCTCGCTCGCTGCTGTCTCTTCGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGATCGATCGGTCACTCTCTGTCTTCCCCATATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGTGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGCCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCTCGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACGGCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCGCCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGGGGTGGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCATGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAG ]
[+] EMBL CB645671 [ CGCGCGTGGCGCGCCATATCCTGCTCGCGTTTCCCCGGTTTTTCGTATTAAAACCAACGGCGCGCCGCCGCCAGACGACCGGACAGAGTGCTCGCTCGCTGCTGTCTCTTCGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGATCGATCGGTCACTCTCTGTCTTCCCCATATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGCCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCTCGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACGGCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCGCCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAA ]
[+] EMBL CB677343 [ CGCGCGGCGCGCCATATCCTGCTCGCGTTTCCCCGGTTTTTCGTATTAAAACCAACGGCGCGCCGCCGCCAGACGACCGGACAGAGTGCTCGCTCGCTGCTGTCTCTTCGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGATCGATCGGTCACTCTCTGTCTTCCCCATATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCAGCCCCAGGCTCGGCTCCGCCGTGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCATGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGCCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCTCGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACGGCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCGCCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTT ]
[+] EMBL AK105359 [ GGCGCGCCGCCGCCAGACGACCGGACAGAGTGCTCGCTCGCTGCTGTCTCTTCGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGATCGATCGGTCACTCTCTGTCTTCCCCATATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGCCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCTCGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACGGCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCGCCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCGTTTTATGTGGTTTTCTGTACGGTTTTCTATAAATGTATAGTGTGTCTCGTTTTATGCATGGTTACCTGCACTTGA]
consensusID : consensus_12247#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 790 fasta sequence
[CACACGTAATTAAGCAACCGGATTAAATTCCTGGATCCGAGTCATGTTTGCGCGCGAGTAAAATGCATGCAGGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGG-ACGC-GGTGGCGCAGAGCTACTGGCAC-GTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTC-GCTCATGTAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCGTTTTATGTGGTTTTCTGTACGGTTTTCTAAAGGTGTATAGTGTGTCTCGTTTTATGCATGGTTCCTTAAAGG]
[-] EMBL CB681183 [CACACGTAATTAAGCAACCGGATTAAATTCCTGGATCCGAGTCATGTTTGCGCGCGAGTAAAATGCATGCAGGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGG ACGC GGTGGCGCAGAGCTACTGGCAC GTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTC GCTCATGTAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCGTTTTATGTGGTTTTCTGTACGGTTTTCTAAAGGTGTATAGTGTGTCTCGTTTTATGCATGGTTCCTTAAAGG]
[+] EMBL AU101609 [ TCGGC GGGGCGGACCCGGAACGCGGGTGGCGCAGAGCTACTGGCACGGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGGCTCATGTAGTCGNCCGGCCGATCGGGAAGGTGGANAGGCATGCACTGTAGCTCCGNCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCGTTTaaaaaa ]
[+] EMBL CF196934 [ TAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCACTGTAGCTCCGGTGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCTTGCGCGCGCCGCTTGGCACTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCATCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCNNNNNNNNNCGACCTGCAAAAANNNATGTGATTTTTCTGTACGNNNTTCTANNNATGTATNNNAGTATTATGTCTCGnn ]
[+] EMBL CA766198 [ AGGCATGCACTGTAGCTCCGGTGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCTTGCGCGCGCCGCTTGGCACTTCGCGCGCCTAATTTTTAGTGTGTG ]
consensusID : consensus_12247#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 749 fasta sequence
[AGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCAAAAAAAAGA]
[-] EMBL CB645672 [AGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCAAAAAAAAGA]
consensusID : consensus_12247#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence
[CGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAGTGCTCGCTCGCTGCTGTCTCTTCGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGATCGATCGGTCACTCTCTGTCTTCCCCATATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTNGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGACCGACGCGCGGTCCGTGCGCAAGGCCTTTCGAA]
[+] EMBL OSR04491A [CGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAGTGCTCGCTCGCTGCTGTCTCTTCGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGATCGATCGGTCACTCTCTGTCTTCCCCATATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTNGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGACCGACGCGCGGTCCGTGCGCAAGGCCTTTCGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12247#0 CGGAGACGTCGCGCGCGGCGCGCCATATCCTGCTCGCGTTTCCCCGGTTTTTCGTATTAA 60
consensus_12247#3 ----------------------------------------------------CGCCCACG 8
consensus_12247#1 --------------------------------------------------CACACGTAAT 10
consensus_12247#2 -------------------------AGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCA 35
*
consensus_12247#0 A-ACCAACGGCGCGCCGCCGCCAGACGACCGGACAGAGTGCTCGCTCGCTGCTGTCTCTT 119
consensus_12247#3 C-GTCCGCC-CACGCGTCCGCC---CACGCGTCCGGAGTGCTCGCTCGCTGCTGTCTCTT 63
consensus_12247#1 TAAGCAACCGGATTAAATTCCTGGATCCGAGTCATGTTTGCGCGCG-AGTAAAATGCATG 69
consensus_12247#2 CCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGC-CG-GCTACTCCG-ATC 92
* * * * * * * * *
consensus_12247#0 CGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGAT---------CGA 170
consensus_12247#3 CGAGCTTGCTTTGCGTTTGCGTTGCGTTGCTTTGCTCGATCGATCGAT---------CGA 114
consensus_12247#1 CAGGCT-GCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAG 128
consensus_12247#2 TAAGCT-GCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCC-G 150
*** ** *** *** ** * * * * * *** * * *
consensus_12247#0 TCGGTCACTCTCTGTCTTCCCCATATGCTGAG-GTCAGTGTC-----CGGGTCCAACTCG 224
consensus_12247#3 TCGGTCACTCTCTGTCTTCCCCATATGCTGAG-GTCAGTGTC-----CGGGTCCAACTCG 168
consensus_12247#1 CCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCA 188
consensus_12247#2 CCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCA 210
*** * ** ** * ** *** * * * * * *** ** *** **
consensus_12247#0 TCGAGGGGCAT-CGCCGCCGTG-GTCGGCGTCGGCCCCAGGCTCGGCTCCGC-CGTGG-C 280
consensus_12247#3 TCGAGGGGCAT-CGCCGCCGTG-GTCGGCGTCGGCCCCAGGCTCGGCTCCGC-CGTNGGC 225
consensus_12247#1 GGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTG 248
consensus_12247#2 GGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTG 270
****** * ** ** * * * ******** * * ** *** *** ** *
consensus_12247#0 TCGCA-AGTT-----CGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGA 334
consensus_12247#3 TCGCA-AGTT-----CGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGA 279
consensus_12247#1 GCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGC-GCGTGGACGCAGGAGATGGA 307
consensus_12247#2 GCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGC-GCGTGGACGCAGGAGATGGA 329
**** ** * * * *** * ** ** * ** * * ** * **
consensus_12247#0 GAAGCTGTCGCAGCTGGCGGAGGAGATCGC--GCAGGAGGCGAAGGCGCAGGTGTTCGCG 392
consensus_12247#3 GAAGCTGTCGCAGCTGGCGGAGGAGATCGC--GCAGGAGGCGAAGGCGCAGGTGTTCGCG 337
consensus_12247#1 CATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCA 367
consensus_12247#2 CATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGAGGTGGAGAGGCATGCA 389
* * ***** * * * ** ** ** * * * *** * ** * **
consensus_12247#0 CTGCGGGTG-GACTGCG-CCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCT 450
consensus_12247#3 CTGCGGGTG-GACTGCGACCGACGCGCGGTCCGTGCGCAAGGCCTTTCGAA--------- 387
consensus_12247#1 CTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAA 427
consensus_12247#2 CTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGAAGAAAAAAAGAAA 449
*** * * * * *** * ** * *** *
consensus_12247#0 CGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACG 510
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCAT 487
consensus_12247#2 ATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCGTGTGCGCGGCTGCGGACCGGGCAT 509
consensus_12247#0 GCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCG 570
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 CGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTG 547
consensus_12247#2 CGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTGCGCGCGCCGCTTG 569
consensus_12247#0 CCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTTATACCGGGGATGG 630
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 GCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCG 607
consensus_12247#2 GCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGTCCGCCGTCCATCG 629
consensus_12247#0 TCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACG 690
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 GCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCA 667
consensus_12247#2 GCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGACCTGCAAAAATTCA 689
consensus_12247#0 CCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGG 750
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 TGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCGTTTTATGTG 727
consensus_12247#2 TGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGTCTCAAAAAAAAGA 749
consensus_12247#0 CCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCG 810
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 GTTTTCTGTACGGTTTTCTAAAGGTGTATAGTGTGTCTCGTTTTATGCATGGTTCCTTAA 787
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 GCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGG 870
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 AGG--------------------------------------------------------- 790
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 ACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGA 930
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 CGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAGTCGGCCGGCCGATCGGGGGGGT 990
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 GGAGAGGCATGCACTGTAGCTCCGGCGGCGGAATCTCTACTGTTGCCAAGGAAGGAAAGA 1050
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 AGAAAAAAAGAAAATTCATTGATCGTGTCATCGTGTGGTGTGGTGTGCATGTGCGCGGCT 1110
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 GCGGACCGGGCATCGTGTCCCCGTTCCGCGTCGCATGTCTTCTTTTTTTCGCGCTGCGTG 1170
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 CGCGCGCCGCTTGGCGCTTCGCGCGCCTAATTTTTAGTGTGTGGTTGATGCATCATCCGT 1230
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 CCGCCGTCCATCGGCAGCATCCAGCAGCCGGTGCACGGGGAAGTTGCCGACGACGGCGAC 1290
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 CTGCAAAAATTCATGTGATTTTTCTGTACGGTTTTCTATAAATGTATAGTAGTATTATGT 1350
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 CTCGTTTTATGTGGTTTTCTGTACGGTTTTCTATAAATGTATAGTGTGTCTCGTTTTATG 1410
consensus_12247#3 ------------------------------------------------------------
consensus_12247#1 ------------------------------------------------------------
consensus_12247#2 ------------------------------------------------------------
consensus_12247#0 CATGGTTACCTGCACTTGA 1429
consensus_12247#3 -------------------
consensus_12247#1 -------------------
consensus_12247#2 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||