cluster # 12253

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12253 cluster # 12253 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12253#0 length = 1551 sequences # 7

consensus_12253#1 length = 852 sequences # 1
consensus_12253#2 length = 701 sequences # 2

consensusID : consensus_12253#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1551
fasta sequence

                              [ATTCTGTTTCTCTTCTGTTGGCTCATCGTTGGTTTCGCCCATATTCCTCTTCTTGAAGGGGATCGCTGATCAGCAAGGTACTCTCTCTTCGATCCCCTTCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGGGCTCTGCCTCGCGTGCCGCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCTCGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCGGTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGCACGGCTTTTGCGCTTGGGGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGGAAGTTGTCGGCGATCTGCTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCTGGTTGGCGGTGAAATTGGCGTGCGTATTCGCGTAACTACATATCTACATGTGCTGTTTGATCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCTCATAGCAATGGGCTTTGTTCGCTATCAAGCAAGCGTTAATTCTCAGTACAGTGCTTTGCTTTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTGCTCCTGACCTGCTTCCACAATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGAATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGCCTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAAGAACTATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATGGAAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTTCATGCTGTTGATTACAAAGTTCGCAAATGTGCCCCTCTCTGTGGTAAAAAA]

[+] EMBL AK065609             [ATTCTGTTTCTCTTCTGTTGGCTCATCGTTGGTTTCGCCCATATTCCTCTTCTTGAAGGGGATCGCTGATCAGCAAGGTACTCTCTCTTCGATCCCCTTCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGGGCTCTGCCTCGCGTGCCGCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCTCGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCGGTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGCACGGCTTTTGCGCTTGGGGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGGAAGTTGTCGGCGATCTGCTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCTGGTTGGCGGTGAAATTGGCGTGCGTATTCGCGTAACTACATATCTACATGTGCTGTTTGATCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCTCATAGCAATGGGCTTTGTTCGCTATCAAGCAAGCGTTAATTCTCAGTACAGTGCTTTGCTTTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTGCTCCTGACCTGCTTCCACAATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGAATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGCCTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAAGAACTATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATGGAAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAATTTTGGCTCTTA                                                                                                          ]
[-] EMBL CF294417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGAATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGCCTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGAAAAAATCTCCAAAAAGAACTATTGAAGAATCAGTGGATAAGTCCAAAAAAGCTGATGCGATTAAGACTGCTTTGATGGAAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAATAACAAGAAGAAGAAGAAGAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB675678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAA                                                                                                                      ]
[-] EMBL CB675679             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAACACTATGAGCAGGAGAACATGTGGATGCGTGGGATATTGAAGAGGAAGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGATGAAGAAGAATAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTAAGGGTCCTAGGACAGTACCAGGTAAAATTTTGGCT                                                                                                              ]
[-] EMBL CB672128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCCCTATGATGAATTCCCCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCCCAAGAGGGTGATGAATGATGACTCTGGCCCCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGCCAGTGGCAGGAATGTTTTACAGATATCCTACTAACCCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGCCAGTACCAGGTAAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTTCATGCTGTTGATTACAAGGTTCGCAAATGTGCCCC                ]
[-] EMBL CF308222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTTCATGCTGTTGATTACAAAGTTCGCAAATGTGACACTCTCTGTGGTAAAAAA]
[+] EMBL CA753587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGGCAGTACCAGGTAAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTTCATGCTGTTGATTAAAAAaaaaaaa                          ]




>consensus_12253#0
ATTCTGTTTCTCTTCTGTTGGCTCATCGTTGGTTTCGCCCATATTCCTCTTCTTGAAGGG
GATCGCTGATCAGCAAGGTACTCTCTCTTCGATCCCCTTCCCCCCCCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGGGCTCTGCCTCGCGTGCC
GCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCT
CGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCG
GTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGCACGGCTTTTGCGCTTGG
GGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGGAAGTTGTCGGCGATCTG
CTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCT
GGTTGGCGGTGAAATTGGCGTGCGTATTCGCGTAACTACATATCTACATGTGCTGTTTGA
TCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCT
CATAGCAATGGGCTTTGTTCGCTATCAAGCAAGCGTTAATTCTCAGTACAGTGCTTTGCT
TTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTGCTCCTGACCTGCTTCCA
CAATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGA
ATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGC
CTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAAGAA
CTATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATGG
AAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGG
TGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCC
GCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGAC
TCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATAT
TGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTA
TCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAATTTTGGC
TCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTT
CATGCTGTTGATTACAAAGTTCGCAAATGTGCCCCTCTCTGTGGTAAAAAA

consensusID : consensus_12253#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 852
fasta sequence

                              [TCTTCTTGAAGGGGATCGCTGATCAGCAAGGTTCTGAGGTGCTCCTGACCTGCTTCCACAATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGAATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGCCTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAAGAACTATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATGGAAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTTCATGCTGTTGATTA]

[+] EMBL AK066929             [TCTTCTTGAAGGGGATCGCTGATCAGCAAGGTTCTGAGGTGCTCCTGACCTGCTTCCACAATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGAATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGCCTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAAGAACTATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATGGAAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTGGCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTTCATGCTGTTGATTA]




>consensus_12253#1
TCTTCTTGAAGGGGATCGCTGATCAGCAAGGTTCTGAGGTGCTCCTGACCTGCTTCCACA
ATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGAAT
GAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGCCT
AAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAAGAACT
ATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATGGAA
GCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAAGAA
GAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
CAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTG
GCCATCAAACAAGGCACAGATTTCGAAGAGCAACGGAAGGCTCACTATGATGAATTCCGC
AAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAATGATGACTC
TGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGCATGTTAAATATTG
GCAGTGGCAGGAATGTTTTACAGATATCCTACTAAACCTTAAAAAGCTCATGTGACTATC
TGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGTAAAATTTTGGCTC
TTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTTATGCTCTTGTTCA
TGCTGTTGATTA

consensusID : consensus_12253#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 701
fasta sequence

                              [AATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACTCTCTCTTCGATCCCCTTCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGGGCTCTGCCTCGCGTGCCGCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCTCGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCGGTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGCACGGC-TTTTGCGCTTGGGGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGG-AAGTTGTCGGCGATCTGCTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCTGGTTGGCGGTGAAATTGGCGTGCGTATTCGCGTAACTACATATCTACATGTGCTGTTTGATCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCTCATAGCAATGGG-CTTTGTTCGCTATCAAGCAAGCGTTAATTCTCAGTACAGTGCTTTGCTTTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTGCTCCTGACCTGCTTCCACAATGCAAGCTAAAGAATCCAAAA]

[+] EMBL CF294416             [AATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACTCTCTCTTCGATCCCCTTCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGGGCTCTGCCTCGCGTGCCGCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCTCGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCGGTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGCACGGC TTTTGCGCTTGGGGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGG AAGTTGTCGGCGATCTGCTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCTGGTTGGCGGTGAAATTGGCGTGCGTATTCGCGTAACTACATATCTACATGTGCTGTTTGATCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCTCATAGCAATGGG CTTTGTTCGCTATCAAGCAAGCGTTAATTCTCAGTACAGTGCTTTGCTTTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTGCTCCTGACCTGCTTCCACAATGCAAGCTAAAGAATCCAAAA]
[+] EMBL CF308221             [                                         CTCTCTTCGATCCCCTT CCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGGGCTCTGCCTCGCGTGCCGCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCTCGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCGGTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGCACGGCTTTTTGCGCTTGGGGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGGAAAGTTGTCGGCGATCTGCTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCTGGTTGGCGGTGAAATTGGCGTGCGCATTCGCGTAACTACATATCTACATGTGCTGTTTGATCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCTCATAGCAATGGGCCTTTGTTCGCTATCAAGCAAGC                                                                                                              ]




>consensus_12253#2
AATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACTCTCTCTTCGATCCCCTTCC
CCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGG
GCTCTGCCTCGCGTGCCGCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCC
TTCGCCGTCGTCATCCTCGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGAC
GTTCCGACACGCGGTCGGTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGC
ACGGCTTTTGCGCTTGGGGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGG
AAGTTGTCGGCGATCTGCTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTC
CGATCCGTTCCATCCCTGGTTGGCGGTGAAATTGGCGTGCGTATTCGCGTAACTACATAT
CTACATGTGCTGTTTGATCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATG
TAGCTTATCTGAATTCTCATAGCAATGGGCTTTGTTCGCTATCAAGCAAGCGTTAATTCT
CAGTACAGTGCTTTGCTTTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTG
CTCCTGACCTGCTTCCACAATGCAAGCTAAAGAATCCAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12253#0      ATTCTGTTTCTCTTCTGTTGGCTCATCGTTGGTTTCGCCCATATTCCTCTTCTTGAAGGG 60
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      GATCGCTGATCAGCAAGGTACTCTCTCTTCGATCCCCTTCCCCCCCCTCTCTCTCTCTCT 120
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      CTCTCTCTCTCTCTCTCCGCGCGCGGCCTGTCGCGGCTGTTGGGCTCTGCCTCGCGTGCC 180
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      GCTCGCCGTGCTCCGTGATTACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCT 240
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      CGCGCTCGCGCGACAGAATATCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCG 300
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      GTGGGTCGTTCCCCCGTTTCCCCACCGTGGGGTGTGCGTTGGCACGGCTTTTGCGCTTGG 360
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      GGACTTTTAGCGTTTGTGCCCGGCCATCGTAGCGATGCGGGGGAAGTTGTCGGCGATCTG 420
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      CTGATGCGGCTCTGATCACTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCT 480
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      GGTTGGCGGTGAAATTGGCGTGCGTATTCGCGTAACTACATATCTACATGTGCTGTTTGA 540
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      TCAATCTCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCT 600
consensus_12253#1      ------------------------------------------------------------
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      CATAGCAATGGGCTTTGTTCGCTATCAAGCAAGCGTTAATTCTCAGTACAGTGCTTTGCT 660
consensus_12253#1      ------------------------------------------------------TCTTCT 6
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      TTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTGCTCCTGACCTGCTTCCA 720
consensus_12253#1      TGAAGGGGATCGCTGATCAGCA--------AGGTTCTGAGGTGCTCCTGACCTGCTTCCA 58
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      CAATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGA 780
consensus_12253#1      CAATGCAAGCTAAAGAATCCAAAAAGTCAAGGGACAGGGGCCGGGACCGTGTGAAATGGA 118
consensus_12253#2      ------------------------------------------------------------
                                                                                   

consensus_12253#0      ATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGC 840
consensus_12253#1      ATGAAGAAAATTTGAATGACATTGAGTCGACCAAGCCAGTAAGAGAAAAAATCACCGAGC 178
consensus_12253#2      -------AATTCCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACTCTCTCTTCGATC 53
                              ** *     **    *** * ***  *   ****  * *     **  *** *

consensus_12253#0      CTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAA-GA 899
consensus_12253#1      CTAAGACGCCATATCACTCAATGATTGATGAAGATGATGGGACTGTTTCTCCAAAAA-GA 237
consensus_12253#2      CCCTTCCCCCCCCTCTCTCTCTCTCTC----------TCTCTCTCTCTCTCCGCGCGCGG 103
                       *     * **   ** ***  *   *           *    ** * *****      * 

consensus_12253#0      ACTATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATG 959
consensus_12253#1      ACTATTGAAGAATCAGTGGATAAGTCCACTCATGCTGATGCGATTAAGACTGCTTTGATG 297
consensus_12253#2      CCTGTCGCGG--CTGTTGGGCTCTGCCTCGCGTGCCGCT-CGCCGTGCTCCG---TGATT 157
                        ** * *  *      ***      ** * * *** * * **       * *   **** 

consensus_12253#0      GAAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAA 1019
consensus_12253#1      GAAGCTGTTTCAAGTGGAAAATTATCAGCAAGAGAACATTTGGAATCCTGTAGTAATGAA 357
consensus_12253#2      ACTTCTGTGCTCGTCAGGCTTCCTTCGCCGTCGTCATCCTCGCGCTCGCGCGACAGAATA 217
                           ****        *       **  *      *   * *   **  *    *    *

consensus_12253#0      GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 1079
consensus_12253#1      GAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA 417
consensus_12253#2      TCTCATGATCGATCCGTGGTGACGTTCCGACACGCGGTCGGTGG-GTCGTTCCCCCGTTT 276
                           * **   *   *  *          * * *  *  *  *  *  *           

consensus_12253#0      GAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAG 1139
consensus_12253#1      GAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAG 477
consensus_12253#2      CCCCACCGTGGGGTGTGCGTTGGCACGGCTTTTGCGCTTGGGGACTTTTAGCGTTTGTGC 336
                          **    *  *     *  *     *     *     *  **     *          

consensus_12253#0      GTGGCCATCA-AACAAGGCACAGA----TTTCGAAGAGCAACGGAAGGCTCACTATGATG 1194
consensus_12253#1      GTGGCCATCA-AACAAGGCACAGA----TTTCGAAGAGCAACGGAAGGCTCACTATGATG 532
consensus_12253#2      CCGGCCATCGTAGCGATGCGGGGGAAGTTGTCGGCGATCTGCTGATG--CGGCTCTGATC 394
                         *******  * * * **   *     * ***  ** *  * ** *     ** **** 

consensus_12253#0      AATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAAT 1254
consensus_12253#1      AATTCCGCAAGATGAAGGAACTGCGTCGGAGGGGAACGCCGTCACAAGAGGGTGATGAAT 592
consensus_12253#2      A---CTGCATATCTGATCAGTTACGTGTCCGATCCGTTCCATCCCTGGTTGGCGGTGAA- 450
                       *   * ***      *  *  * ***    *       ** ** *  *  ** * **** 

consensus_12253#0      GATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGC--ATG 1312
consensus_12253#1      GATGACTCTGGCACCGTCGCACAACTCGGAAGCATATGATCAGCGAATCCTCGGC--ATG 650
consensus_12253#2      ATTGGCGT--GCGTATTCGCGTAACT-----ACATATCTACATGTGCTGTTTGATCAATC 503
                         ** *    **    ****  ****      *****   **     *  * *    ** 

consensus_12253#0      TTAAATATTGGCAGTG-GCAGGAATGTTTTACAGATAT--CCTACTAAACCTTAAAAAGC 1369
consensus_12253#1      TTAAATATTGGCAGTG-GCAGGAATGTTTTACAGATAT--CCTACTAAACCTTAAAAAGC 707
consensus_12253#2      TCACGTTTCGGTTATGTGCGGTGATGAACTGATGATGTAGCTTATCTGAATTCTCATAGC 563
                       * *  * * **   ** ** *  ***   *   *** *  * **    *  *   * ***

consensus_12253#0      TCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGT 1429
consensus_12253#1      TCATGTGACTATCTGTTCTCTTGCTTAATTATTAGTACTGGTCCTAGGACAGTACCAGGT 767
consensus_12253#2      A-ATG-GGCTTTGTTCGCTATCAAGCAAGCGTTAAT-----TCTCAGTACAGTGCTTTGC 616
                         *** * ** * *   ** *     **   *** *     **  ** ***** *   * 

consensus_12253#0      AAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTT 1489
consensus_12253#1      AAAATTTTGGCTCTTATTATGGAGGTAAGAAAATCTGTATCGATCTTGTACTCAAAACTT 827
consensus_12253#2      TTTAGATGTTCAGTTAGTATAAAGCTATTGCAGGTTCTGAGGTGCTCCTGACCTGCTTCC 676
                          *  *   *  *** ***  ** **    *   * *   *  **  *   *       

consensus_12253#0      ATGCTCTTGTTCATGCTGTTGATTACAAAGTTCGCAAATGTGCCCCTCTCTGTGGTAAAA 1549
consensus_12253#1      ATGCTCTTGTTCATGCTGTTGATTA----------------------------------- 852
consensus_12253#2      ACAATGCAAGCTAAAGAATCCAAAA----------------------------------- 701
                       *   *       *     *  *  *                                   

consensus_12253#0      AA 1551
consensus_12253#1      --
consensus_12253#2      --