cluster # 12254

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Oryza sativa
cluster # 12254 cluster # 12254 Sequences # 10 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12254#0 length = 1412 sequences # 2
consensus_12254#1 length = 1351 sequences # 4
consensus_12254#2 length = 821 sequences # 1

consensus_12254#3 length = 667 sequences # 1
consensus_12254#4 length = 333 sequences # 1
consensus_12254#5 length = 191 sequences # 1

consensusID : consensus_12254#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1412
fasta sequence

                              [ATTTATCATTGTTTAACTTTTTTCTTCATCCGATTTTCGGTTCGGACGAGAGCTCTATTGCCGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCCGCACCGGCGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTACTCACGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCGCTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACCGGCTCTATCAACAATCAATTTGATGTATGTGCTCTTCTTTGTGCATATTGAACAATTAATTTGATGTGCTCTTCTTGCCG]

[+] EMBL AK068636             [ATTTATCATTGTTTAACTTTTTTCTTCATCCGATTTTCGGTTCGGACGAGAGCTCTATTGCCGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCCGCACCGGCGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTACTCACGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCGCTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACCGGCTCTATCAACAATCAATTTGATGTATGTGCTCTTCTTTGTGCATATTGAACAATTAATTTGATGTGCTCTTCTTGCCG]
[+] EMBL CB677105             [                                         TCGGACGAGAGCTCTATTGCCGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCCGCACCGGCGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTACTCACGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_12254#0
ATTTATCATTGTTTAACTTTTTTCTTCATCCGATTTTCGGTTCGGACGAGAGCTCTATTG
CCGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCCGCACCGG
CGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTAC
TACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTACTCACGCTCTTC
GTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGC
CCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTC
GTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTA
TTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAA
CGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGA
GCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGAT
GATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGAT
GATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAG
CAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCA
CCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAG
GAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATG
CCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTA
CAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCA
AAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCGCTGACCA
CCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTA
ATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCA
AACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTT
CTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACC
AGGCGGCTAACCGGCTCTATCAACAATCAATTTGATGTATGTGCTCTTCTTTGTGCATAT
TGAACAATTAATTTGATGTGCTCTTCTTGCCG

consensusID : consensus_12254#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1351
fasta sequence

                              [CGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCACCGGCGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTCCTCACGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCTGCAGAA-CGGAGTGGTTGTCATTGATGACTGGTGCTTCCTTTCGTGCACAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTTGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACCGGCTCTATCAACAATCAATTTGATGTGTGTGCTCTTCTTTGTGC]

[+] EMBL CB622635             [CGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCACCGGCGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTCCTCACGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCTGCAGAA CGGAGTGGTTGTCATTGATGACTGGTGCTTCCTTTCGTGCACAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB622634             [CGTAGGACCATGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCACCGGCGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTCCTCACGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCTGCAGAA CGGAGTGGTTGTCATTGATGACTGGTGCTTCCTTTCGCGCACAGTAGTGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB618037             [                                                      GGCGCTGTGCCGACGAGATGACCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTCCTCACGCTCTTCGTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCTGCAGAACCGGAGTGGTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB622636             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCTGCAGAA CGGAGTGGTTGTCATTGATGACTGGTGCTTCCTTTCGTGCACAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTTGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACCGGCTCTATCAACAATCAATTTGATGTGTGTGCTCTTCTTTGTGC]




>consensus_12254#1
CGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCACCGGCGCT
GTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACG
TGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTCCTCACGCTCTTCGTCG
CCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGCCCCG
GCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTCGTGT
CATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTATTTG
ATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTC
ATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTG
CTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATA
ATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATT
CCGACGAAAAGAATGAATTACCTGCAGAACGGAGTGGTTGTCATTGATGACTGGTGCTTC
CTTTCGTGCACAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAG
ATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAA
ATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGAT
TTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGG
ATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTG
ACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTA
GCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAACATGAAGGTATAT
CATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGTAGCTGTGCTCTT
TAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTTGTTGGA
TCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATT
GTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACCGGCTCTATCAACA
ATCAATTTGATGTGTGTGCTCTTCTTTGTGC

consensusID : consensus_12254#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 821
fasta sequence

                              [GACCATGAGAATGCTGGTGATGGACGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCCGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGCACTTCCCGTTTTCGAAACTTTCCGGAGACAACCAGGCGGCTAACCGGCTCTATCATCAATCAATTTATGTCAAAAAAGGA]

[-] EMBL CB677106             [GACCATGAGAATGCTGGTGATGGACGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCCGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGCACTTCCCGTTTTCGAAACTTTCCGGAGACAACCAGGCGGCTAACCGGCTCTATCATCAATCAATTTATGTCAAAAAAGGA]




>consensus_12254#2
GACCATGAGAATGCTGGTGATGGACGTAATGATGATGATGCATGGGGCGAGGATGATAAT
GGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGATGATTCC
GACGAAAAGAATGAATTACCAGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCAT
AGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGT
TCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTT
TTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTA
GCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGC
ACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATG
AGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGG
ATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCC
AGGCCGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACT
TTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGT
CAGAGTCGGATCGTTAATTGCACTTCCCGTTTTCGAAACTTTCCGGAGACAACCAGGCGG
CTAACCGGCTCTATCATCAATCAATTTATGTCAAAAAAGGA

consensusID : consensus_12254#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence

                              [AAGGCCGAGACAAAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATCTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACTGGCCCTATCAACAATCAATTTGATGTATGTGCTAAAAAAATAAAAAAA]

[-] EMBL CA759899             [AAGGCCGAGACAAAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATCTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACTGGCCCTATCAACAATCAATTTGATGTATGTGCTAAAAAAATAAAAAAA]




>consensus_12254#3
AAGGCCGAGACAAAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGA
TATTCCACCTTGTTCTACTTTATTTGTTGCAAATCTGGGTCACTCATGCACAGAGGAAGA
GCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGG
TGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGA
TGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGC
AAGGTCAAAAATGAGGAAAAGCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCA
CTGACCACCGGGGATCGAACATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGC
ACATGTAATCGCCAGGCTGTAGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGG
GCAATCAAACACTTTGTCACAGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCA
GAAACTTCTCTGTCAGAGTCGGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGA
GACAACCAGGCGGCTAACTGGCCCTATCAACAATCAATTTGATGTATGTGCTAAAAAAAT
AAAAAAA

consensusID : consensus_12254#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 333
fasta sequence

                              [AGGCCGGAGCTNGNTTNTTAAAGGGATTCNAAGGANATANAATNGGGCAATCAAAAAATTTGTCACAGGGGAGGTNGNNTGGNNAAATTGGGTTTCNCNNTTGGTTAGGAAANTTTTTGTTAGNGTCGGANTGGTAANTGAAATTTTTGGTTTTGGAACTTTTCCGGNGACAACCNGGNGGCTAACCGGTTNTATCAACAATCNATTTGAGGNATGTGCTCTTTCTTTGTGCATATTGAACAATTAATTNGATGTGCTCTTCTTGCCGCCATNTTTTGACCTCGTTGCAANAAAAAAANNAGAAGNACAGCCAACTCGTGCCGAATTCGGCAC]

[-] EMBL AA753137             [AGGCCGGAGCTNGNTTNTTAAAGGGATTCNAAGGANATANAATNGGGCAATCAAAAAATTTGTCACAGGGGAGGTNGNNTGGNNAAATTGGGTTTCNCNNTTGGTTAGGAAANTTTTTGTTAGNGTCGGANTGGTAANTGAAATTTTTGGTTTTGGAACTTTTCCGGNGACAACCNGGNGGCTAACCGGTTNTATCAACAATCNATTTGAGGNATGTGCTCTTTCTTTGTGCATATTGAACAATTAATTNGATGTGCTCTTCTTGCCGCCATNTTTTGACCTCGTTGCAANAAAAAAANNAGAAGNACAGCCAACTCGTGCCGAATTCGGCAC]




>consensus_12254#4
AGGCCGGAGCTNGNTTNTTAAAGGGATTCNAAGGANATANAATNGGGCAATCAAAAAATT
TGTCACAGGGGAGGTNGNNTGGNNAAATTGGGTTTCNCNNTTGGTTAGGAAANTTTTTGT
TAGNGTCGGANTGGTAANTGAAATTTTTGGTTTTGGAACTTTTCCGGNGACAACCNGGNG
GCTAACCGGTTNTATCAACAATCNATTTGAGGNATGTGCTCTTTCTTTGTGCATATTGAA
CAATTAATTNGATGTGCTCTTCTTGCCGCCATNTTTTGACCTCGTTGCAANAAAAAAANN
AGAAGNACAGCCAACTCGTGCCGAATTCGGCAC

consensusID : consensus_12254#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 191
fasta sequence

                              [CACCACCCCTGCTGACAAGTATTCCTTGAAATGCTTTAGTCTGCATATGAATTATGATTTTGTTTGTGCAGGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTAGGGNCGCTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATT]

[+] EMBL AA749759             [CACCACCCCTGCTGACAAGTATTCCTTGAAATGCTTTAGTCTGCATATGAATTATGATTTTGTTTGTGCAGGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTAGGGNCGCTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATT]




>consensus_12254#5
CACCACCCCTGCTGACAAGTATTCCTTGAAATGCTTTAGTCTGCATATGAATTATGATTT
TGTTTGTGCAGGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTAT
TTGTTGCAAATTTAGGGNCGCTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAG
CAACCTGGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12254#1      ------------------------------------------------------------
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      ATTTATCATTGTTTAACTTTTTTCTTCATCCGATTTTCGGTTCGGACGAGAGCTCTATTG 60
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      ----CGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCACCGG 56
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      CCGTAGGAGCAGGAGAAGGGAGCAGGGAGAGCGCCGCCGCCGCCGCCGCCGCCGCACCGG 120
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      CGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTAC 116
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      CGCTGTGCCGACGAGATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTAC 180
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      TACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTCCTCACGCTCTTC 176
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      TACGTGTACGCGCCGCACCCCTACCCAGATCCGCAGCGGCAGGGGGTACTCACGCTCTTC 240
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      GTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGC 236
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GTCGCCGGCCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAACCTCTTCTCCAGCCGC 300
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      CCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTC 296
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      CCCGGCTTCGACCACTGCCTCCTCGAGTACACCGGCCGCGGGAACCAGGTGGTGGCCTTC 360
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      GTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTA 356
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGGGACTGTA 420
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      TTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAA 416
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      TTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAA 480
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      CGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGA 476
consensus_12254#2      ------------------------------------------------------------
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      CGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGA 540
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      GCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGAT 536
consensus_12254#2      ------GACCATGAGAATGCTGGTGATGGACGTAATGATGATGATGCATGGGGCGAGGAT 54
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGAT 600
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      GATAATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGAT 596
consensus_12254#2      GATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGAT 114
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GATAATGGTGGTAATGATGGAGATGGTGGATCTGATGAGCCATTGGACACAGAAAATGAT 660
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      GATTCCGACGAAAAGAATGAATTACCTGCAGAACGGAGTGGTTGTCATTGATGACTGGTG 656
consensus_12254#2      GATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGT--------------------- 153
consensus_12254#3      ------------------------------------------------------------
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GATTCCGACGAAAAGAATGAATTACCAGCAGAACGGAGT--------------------- 699
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      CTTCCTTTCGTGCACAGTAGTGGTCAACCAG--GGCTTAAGCAGCATAGGGGGCA--ATC 712
consensus_12254#2      ------------------AGTGGTCAACCAG--GGCTTAAGCAGCATAGGGGGCA--ATC 191
consensus_12254#3      -----------------------------AA--GGCCGAGACAA---AGGGGGCA--ATC 24
consensus_12254#5      -CACCACCCCTGCTGACAAGTATTCCTTGAAATGCTTTAGTCTGCATATGAATTATGATT 59
consensus_12254#0      ------------------AGTGGTCAACCAG--GGCTTAAGCAGCATAGGGGGCA--ATC 737
consensus_12254#4      ---------AGGCCGGAGCTNGNTTNTTAAAGGGATTCNAAGGANATANAATNGGGCAAT 51
                                                    *   *             *         *  

consensus_12254#1      TCTTTCAGAT--GATCAACCAGACAAATTG-TCAAGTGATATTCCACCTTGTTCTACTTT 769
consensus_12254#2      TCTTTCAGAT--GATCAACCAGACAAATTG-TCAAGTGATATTCCACCTTGTTCTACTTT 248
consensus_12254#3      TCTTTCAGAT--GATCAACCAGACAAATTG-TCAAGTGATATTCCACCTTGTTCTACTTT 81
consensus_12254#5      TTGTTTGTGCAGGATCAACCAGACAAATTG-TCAAGTGATATTCCACCTTGTTCTACTTT 118
consensus_12254#0      TCTTTCAGAT--GATCAACCAGACAAATTG-TCAAGTGATATTCCACCTTGTTCTACTTT 794
consensus_12254#4      CAAAAAATTTGTCACAGGGGAGGTNGNNTGGNNAAATTGGGTTTCNCNNTTGGTTAGGAA 111
                                    *      **      **   ** *    ** * *  *    **    

consensus_12254#1      ATTTGTTGCAAATTT-GGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTA 828
consensus_12254#2      ATTTGTTGCAAATTT-GGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTA 307
consensus_12254#3      ATTTGTTGCAAATCT-GGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTA 140
consensus_12254#5      ATTTGTTGCAAATTTAGGGNCGCTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTA 178
consensus_12254#0      ATTTGTTGCAAATTT-GGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTA 853
consensus_12254#4      ANTTTTTGTTAGNGTCGGANTGGTAAN---TGAAATTTTTGGTTTTGGAACTTTTCCGGN 168
                       * ** ***  *   * **     * *       *      * *   **** ****     

consensus_12254#1      AGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTG 888
consensus_12254#2      AGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTG 367
consensus_12254#3      AGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTG 200
consensus_12254#5      AGCAACCTGGATT----------------------------------------------- 191
consensus_12254#0      AGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTG 913
consensus_12254#4      GACAACCNGGNGGCTAACCGGTTNTATCAACAATCNATTTGAGGNATGTGCTCTTTCTTT 228
                         ***** **                                                  

consensus_12254#1      CTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGC 948
consensus_12254#2      CTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGC 427
consensus_12254#3      CTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGC 260
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      CTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGC 973
consensus_12254#4      GTGCATATTGAACAATTAATTNGATGTGCTCTTCTTGCCGCCATNTTTTGACCTCGTTGC 288
                                                                                   

consensus_12254#1      TAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAA 1008
consensus_12254#2      TAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAA 487
consensus_12254#3      TAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAA 320
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      TAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAA 1033
consensus_12254#4      AANAAAAAAANNAGAAGNACAGCCAACTCGTGCCGAATTCGGCAC--------------- 333
                                                                                   

consensus_12254#1      GCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAAC 1068
consensus_12254#2      GCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAAC 547
consensus_12254#3      GCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCACTGACCACCGGGGATCGAAC 380
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GCTAGCTCACTAGCTACTTGTTCTACATCAGCAGTGAGCGCTGACCACCGGGGATCGAAC 1093
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      ATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGT 1128
consensus_12254#2      ATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCCGT 607
consensus_12254#3      ATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGT 440
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      ATGAAGGTATATCATTTGCCATTTGGCATCCCATGCCAGCACATGTAATCGCCAGGCTGT 1153
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      AGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCAC 1188
consensus_12254#2      AGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCAC 667
consensus_12254#3      AGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCAC 500
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      AGCTGTGCTCTTTAATTGAATTCTAAGAATATAGATCTGGGCAATCAAACACTTTGTCAC 1213
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      AGAGTTGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTC 1248
consensus_12254#2      AGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTC 727
consensus_12254#3      AGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTC 560
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      AGAGTAGTTGGATCGTTTAATTTGGTTTCGCTCTCGTTCAGAAACTTCTCTGTCAGAGTC 1273
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      GGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACCG 1308
consensus_12254#2      GGATCGTTAATTGCACTTCCCGTTTTCGAAACTTTCCGGAGACAACCAGGCGGCTAACCG 787
consensus_12254#3      GGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACTG 620
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GGATCGTTAATTGTACTTCTTGTTTCTGAAACTTTCCGGAGACAACCAGGCGGCTAACCG 1333
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      GCTCTATCAACAATCAATTTGATGTGTGTGCTCTTCTTTGTGC----------------- 1351
consensus_12254#2      GCTCTATCATCAATCAATTT-ATGTCAAAAAAGGA------------------------- 821
consensus_12254#3      GCCCTATCAACAATCAATTTGATGTATGTGCTAAAAAAATAAAAAAA------------- 667
consensus_12254#5      ------------------------------------------------------------
consensus_12254#0      GCTCTATCAACAATCAATTTGATGTATGTGCTCTTCTTTGTGCATATTGAACAATTAATT 1393
consensus_12254#4      ------------------------------------------------------------
                                                                                   

consensus_12254#1      -------------------
consensus_12254#2      -------------------
consensus_12254#3      -------------------
consensus_12254#5      -------------------
consensus_12254#0      TGATGTGCTCTTCTTGCCG 1412
consensus_12254#4      -------------------