These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12281#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1142 fasta sequence [GTTCTTCTCTGGTGATCATCATCATCATCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC-GAACGCTGTGCGAA-GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT-GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT-AT-GATT-GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGAAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT-CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAGGCAGTAATGTTTTGGGCATTTAATTGTGGTAAAAAAAAAGGGCTCCGTAAAGATAATGTCAAAAAGAAAAAATAATTGA] [+] EMBL AK072672 [GTTCTTCTCTGGTGATCATCATCATCATCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGAAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAGGCAGTAATGTTTTGGGCATTTAATTGTGGTAAAAAAAAAGGGCTCCGTAAAGATAATGTCAAAAAGAAAAAATAATTGA] [+] EMBL BP184815 [ ATCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGAAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCA ] [+] EMBL AU101142 [ TCAAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATNAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGANTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTNGTTGAGATCACAAAGGGGAGCTAAGTGAAGTATGAACTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCNATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTTCGAA GATGGGGATCCAATGGATGTTCTGGTCCTGATGCAGGAACCAGTNATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTAATGCCT ATaa ] [+] EMBL AU165331 [ AAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGCTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGGCCTCATGCCT ATGGATTGGATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTT ] [+] EMBL AU165333 [ AAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGCGGAACGCTGTGCGAAGGATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCTGGGCTGCTACCTTAGAGCCAAGGCCATTGGGCTCATGCCTAAT GATT GATCA ] [+] EMBL AU173568 [ AAGTCCTATTAAACATCTGGAGAATGGCTGAAGAAAAGAAGACCCCATGCCTGAATGAGCGGATCCTGTCGTCGCTCTCGAAGCGATCCGTGGCTGCGCATTCCTGGCATGATCTTGAGATTGGACCTGGAGCTCCTCAGGTTTTCAATGTTGTTGTTGAGATCACAAAGGGGAGCAAAGTGAAGTATGAGCTTGACAAGAAGACTGGAATGATCAAGGTTGACAGGGTGCTATACTCATCGGTGGTGTACCCGCACAACTACGGTTTCATACCGC GAACGTTGTGCGAA GATGGGGATCCAATGGATGTGCTGGTCCTGATGCAGGAACCAGTGATTCCT GGCTGCTACCTTAGAGCCAAGGCCATTGG CTCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGGGGTTTCGGTTGATGA NCCGAGTTC ] [+] EMBL AU101143 [ TCATGCCT AT GATT GATCAGGGTGAGAAAGATGATAAGATCATCGCGGTTTGCGTTGATGATCCCGAGTTCCGCCACTTCAATGATCTCAAGGAGCTCTCTCCTCACCGACTTGCTGAAATCCGCCGCTTCTTTGAAGACTACAAGNAGAATGAAAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCAAAaaaaa ] [+] EMBL C98503 [ TGAAGACTACAAGAAGAATG AAACAAAGAGGTCGCCGTAAACGATTTCCTGCCACCGGCAACTGCTCAGGAGGCCATCAAGTACTCCATGGATCTTTATGCTGAATATATCCTGCACAGCCTGAGGCGCTAATTAATTATCATCCGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAaaaaa ] [+] EMBL AU172898 [ TATATCCTGCACAGCCTGAGGCGCTAATTAATTATCAT CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCAGCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAaaaaa ] [+] EMBL C98533 [ CTAATTAATTATCAN CGTCAGATGGAGCAATCAGACCCTGATCTCATGAAGAAAATAACAATAAAAGTCTCTTGGGTGATGCTCTTTTTGAGCANCCATTTTTGCATTATATTTGAAACAAGGGATAATATTATGTTTCTGCATTTGTGCAGAATATATGCAAATCAATAATGTTACTGTTATTGCTTGCACGCAAATATGTTGGTCCAACTAGCTTCAGGCCGAATCATCGATGCATGACCGGTGATAAATGGTGTAATTTTGGACTACAGGTGATAAATATTGTATGATGCCCTGTGTAATATATGTGATTGTATTTGGTTTCTAATTGGCGACTGCTAATTGTATGACGTCAATTTTCCAGAATGGAATAGTAGTATACCTGTTGGTTTCTATGAAGGCAGTAATGTTTTGGGCATTTAAAAAAAAAAAAAAAAAAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||