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Oryza sativa
cluster # 12288 cluster # 12288       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12288#0 length = 4756 sequences # 7  
consensus_12288#1 length = 1381 sequences # 3  

consensusID : consensus_12288#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 4756
fasta sequence
                              [GAGCTGTTGTGAGGGGGAGGGACCTGGCCGTCTAGGTGAGAGGGGGAAACCCCCGGCGGTGGATGGATGCCGTCGAGCTGCCTCTTCCGGCCAAGGTGGATTTCGGGAAGATTTTGACTCCCGCTGCGGTGGAGGGGCTCGAGGGAGGGGGAGGAGGAGGAGGCGGCGGCGGCGGGGGTGGGGATGTTTTGAGGCGCTGCGCAGATGCGGATCGACGGCACGGTGATGTGAAGCAGCACAATCAGAATGTAGATAGCATTTCATCCTACAGAATTAAAGGGACTTCTTCAGAAGTCCCTATGCAGAAATCTCTTGCCCTTGGCATCAAGTCTGAAAACAATGGTAAGCGGGATTATATTGGAACTGAAACTGGTCAAGCCTTGCATAAGCAAGATAGCAAAGTACTGACGAAAAAGACCATAAAGTTGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTAGAGAGACTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGCAATGCACACCATCCGGTAAGTTATCATGTTCCATTGAAATTCTCTGTCAATAGTTTGGAGTGGTATTCCCTTCTCCTTCACCCAGGCAATTCAAGTAGCTTCTTAAGTTCATCTTAGTGGGGTTGGTCTTCTTAGGAGACATTGAGTTATATTCTGACTAGCAGATTTGCAACAATGCTTACAAATCTCTAGCACTGTCCTATCCAAATAGCATATTCATGGGGCTCTTATCCATTTTCATCCTTTATAGTTCCTTTCTAAATGTTCATCATCCTGGCCAATGTTTCCGTTCCCATATTCTAATGCGATAGACAACTTACCATGCTCTGAATAAACCAAATCTTATTTATGTTAATGCACGCACTACTGATCTAAATCCAGTTTAGTATATGCATCTGGCTAGATCTAGTCTACTACTAATATTCTTGTTGCTATAGTATTCAAGTGATTAAAATGTCCTAGAAACCATGTTTTGTTATATGACCGACCCTTATTGGTTCTGGTCAAGTGCAAAGCTTTTGATATATTAATTGTATGTACGCACCATGAGGGGGATTCGTGAATGTTATGTTATATATAGCTCCATTTGATGGCCCATTTTGGATCACAACATTCTTTTTACCATTTTCCTGACTTGGCTTTCATAATCCATGTTTGATGTAATTCTACTTTTGTCTGTGTGGTCATTTGTTTAGTTACTATAGTTCCAGTGCTTCTGTTAACTTCTTTGATATTCTGACAACAAATGCTTTTGCTCTTATCCTAATTGTACAGAAAAATCTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATTGATAAGAAGAATTTTAGGTCTGGTGCCAGGTCTAAATATGATTGTTTCACATCAAGGGCCAGTTTAGGAAATTTTGATCCTTGCTTGGGAAACAACACGCTTGGTATGTGGTAACTGGTTGTAGCTACACTGTAATTTTGTTTATTTATTCATTCTACCTGTTATTATTCCTTTATTGTCTATATTTGCTATGCTGCACTCTCTCACGGCAACCAGAGTCTATTGATTCATTAGAGCTCTTATCAATTAAAACCTGTCAAACATCAATTAGTTAAATATAGAATCAGATATTCCTGATCTGAGACAGTTATTCTTCTAATATGTTTACACACATATGAAATTTCAAAAAATGATTCGAAGAAACATCAGGACTTCAACTTGAATATTTGCTTATGGTCTTCTCAGGTGAAATGGAGTTCATTTTCCCTTGAAGCAATTCCCCCCTTTTTTTTGTTTCATCTACCCTTGAACTTTTTCTAAAAAACGGTGCATATTTTCCTTCCTGCTGTGCTTCCTTTTATCTGAAGTCATTGTTTGTGCTGTCAAACTTCTGACACTCAATCTTTCACAGACCATTGTTTCTAATTTTGTTCTCGAGTAAATTGCACGCACTACGCAAGTTCGTACACCGGAACAGACGTTTTACATGTTCATATACTAGATTACACCCACCTCTCAAGTTTGTGTACCACCGAATTCTCTTTGTTCTCTCTCTCTCCTTACTCTTGATTTCCATTTTTATTACGTATCAACTTACCATGTTGTCAACTTTGTTTTCTTCTATGTCTGATATTCATTTTGGTGATCTACGCCCCCTTTGTATTTCTTTTGCATCTCTTTAGCTGCACATACTAATATAATAATACACCGCTTCCATATTTAACAATTTTGTTTAAAGTTGTAGATTGATGGCCTGGCTGTGACTTTTGCATTATAGGACATCTCTCAGTTTCATCTGATTAAGTAACCTTAAGAATGATTGATAATGTATTTTACAATGTTAATTCCGCACGTATTTTTATTTTAGTGTGCAATATTTCACATCATCACATCACATGGCATGTCAGTGCCATTTGCGTTGTAACACCACAACAGTATCTCTTCCAATTTCGTCTCAAATGAACAACCTTCAGAGGGAGAAATATCATAATGTAATGGAGAAAACTGTTCCTCTTAGTACTTTTCTGGGTCATCAACAATATGAAATCCATGTCTGTTTTTGTTGATCCATTTTCTTGCCTGGCACATAACGGTGTCTGACCTCTTATTTCAGGGACTCATGGTCTTAGATCCGATATCCGTGACATCACAAATCACATTGAGAACCTCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATGGAGGTCTGTGATTCCACAATTCATTGTCCAAAAGATATCCTAAACCGTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGTCGCACTCACAAGCGGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATGGGTCGAGTAGGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTCTAGATAGTGAAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGGCAAAAACATCTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAACTTCTGGTTCCCTTGGACAAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCACAGCAACTATTCTCCATGGACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACGAATCTTTTCTTCTAAGAACACCTCAAGGTATGCAGTTCATGAAGGAAAAAAGCTTTTAACCATACCAATTTCCTTTTGATAAACTCAAGCCCTTCTGATCAATTTCAATTGTATTAATCTCCATGAGTTCTTGCTATGAGCTTGTCAATTGTATTAAGTTCTTGCTATGAGCTTGCTGTTGACATGTTATATTGGAGAAGCATAAAAGCTTTACTGGAGTGGTGCTTCTCTGTCATACATCACTCTAGCAAAACCTAAGAATGTGGGATTTTTTTATTCCTTTTTTTTTTCTTTTTGACACTGGAGCTAGTTGCATGTAGGTTTTACTATCAACCTTAATTACTAGTAATTGCATGCTTGATATACTTAGTTTAATTGTTACAATTTGATGATAAATTGCTGATGTGGAGCTTTTTATGAGCAGCATCACCAAAGGTATTGCAGGCTGCTGAGATCCTATGTGACATGAGAAGCAGCATGGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTTATG-AAGGCCCGCAAGCCTTCAT-CCCCATTTGGTACAGCCGAGAGCTCATCTGGATCTCGGAATAGTGATGCAGCTCGTGCCGGAAATAATCACTCCACCAAGAAAATAGTTGATAGGAAGAATGATTCTGTACGCATGAATAACCCTGGGAAAGGATCTATTAGGTGGCCTGTTCCTATTGAAGATGGCGCATCTCCTGTCAAGTCTGAGAGAGGGCTTGTGCTTGATATGAGGCAAAACCATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGAGTATGAGAACCAGCAGAAGCTGAGGAAAGCAACATTGACCTCATCTCTAGGATCTGCAGGAGATTGGAATAGGGACAGGAACAAGAGAATGTGAATTGTACATTATTCCCGTTGGAAACCATAGTCTGCGATATATATTGTCTGGGGGCAGCCTAGCCAGACAACTGTTACATAAGAGGTAACAGAACATTGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTATCGGGGCATTTGTTGGTACAATTGTTGTAACAATTGTAGTTCTTTTTATTTGCCATCTTACCGGAGGTCTCTCCCTGTCTCACCATCTTCATTGTGTATTAGTATGTCTCGATCTACTTTCAGCCAAAGTAATAATAGCACGGGTGGTTAATTCCATTGAGGGAAATATTCATGCAATATATTGTCTAATTCAAGTTTATATGTTTCATATGCATTG]

[+] EMBL AK100882             [GAGCTGTTGTGAGGGGGAGGGACCTGGCCGTCTAGGTGAGAGGGGGAAACCCCCGGCGGTGGATGGATGCCGTCGAGCTGCCTCTTCCGGCCAAGGTGGATTTCGGGAAGATTTTGACTCCCGCTGCGGTGGAGGGGCTCGAGGGAGGGGGAGGAGGAGGAGGCGGCGGCGGCGGGGGTGGGGATGTTTTGAGGCGCTGCGCAGATGCGGATCGACGGCACGGTGATGTGAAGCAGCACAATCAGAATGTAGATAGCATTTCATCCTACAGAATTAAAGGGACTTCTTCAGAAGTCCCTATGCAGAAATCTCTTGCCCTTGGCATCAAGTCTGAAAACAATGGTAAGCGGGATTATATTGGAACTGAAACTGGTCAAGCCTTGCATAAGCAAGATAGCAAAGTACTGACGAAAAAGACCATAAAGTTGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTAGAGAGACTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGCAATGCACACCATCCGGTAAGTTATCATGTTCCATTGAAATTCTCTGTCAATAGTTTGGAGTGGTATTCCCTTCTCCTTCACCCAGGCAATTCAAGTAGCTTCTTAAGTTCATCTTAGTGGGGTTGGTCTTCTTAGGAGACATTGAGTTATATTCTGACTAGCAGATTTGCAACAATGCTTACAAATCTCTAGCACTGTCCTATCCAAATAGCATATTCATGGGGCTCTTATCCATTTTCATCCTTTATAGTTCCTTTCTAAATGTTCATCATCCTGGCCAATGTTTCCGTTCCCATATTCTAATGCGATAGACAACTTACCATGCTCTGAATAAACCAAATCTTATTTATGTTAATGCACGCACTACTGATCTAAATCCAGTTTAGTATATGCATCTGGCTAGATCTAGTCTACTACTAATATTCTTGTTGCTATAGTATTCAAGTGATTAAAATGTCCTAGAAACCATGTTTTGTTATATGACCGACCCTTATTGGTTCTGGTCAAGTGCAAAGCTTTTGATATATTAATTGTATGTACGCACCATGAGGGGGATTCGTGAATGTTATGTTATATATAGCTCCATTTGATGGCCCATTTTGGATCACAACATTCTTTTTACCATTTTCCTGACTTGGCTTTCATAATCCATGTTTGATGTAATTCTACTTTTGTCTGTGTGGTCATTTGTTTAGTTACTATAGTTCCAGTGCTTCTGTTAACTTCTTTGATATTCTGACAACAAATGCTTTTGCTCTTATCCTAATTGTACAGAAAAATCTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATTGATAAGAAGAATTTTAGGTCTGGTGCCAGGTCTAAATATGATTGTTTCACATCAAGGGCCAGTTTAGGAAATTTTGATCCTTGCTTGGGAAACAACACGCTTGGTATGTGGTAACTGGTTGTAGCTACACTGTAATTTTGTTTATTTATTCATTCTACCTGTTATTATTCCTTTATTGTCTATATTTGCTATGCTGCACTCTCTCACGGCAACCAGAGTCTATTGATTCATTAGAGCTCTTATCAATTAAAACCTGTCAAACATCAATTAGTTAAATATAGAATCAGATATTCCTGATCTGAGACAGTTATTCTTCTAATATGTTTACACACATATGAAATTTCAAAAAATGATTCGAAGAAACATCAGGACTTCAACTTGAATATTTGCTTATGGTCTTCTCAGGTGAAATGGAGTTCATTTTCCCTTGAAGCAATTCCCCCCTTTTTTTTGTTTCATCTACCCTTGAACTTTTTCTAAAAAACGGTGCATATTTTCCTTCCTGCTGTGCTTCCTTTTATCTGAAGTCATTGTTTGTGCTGTCAAACTTCTGACACTCAATCTTTCACAGACCATTGTTTCTAATTTTGTTCTCGAGTAAATTGCACGCACTACGCAAGTTCGTACACCGGAACAGACGTTTTACATGTTCATATACTAGATTACACCCACCTCTCAAGTTTGTGTACCACCGAATTCTCTTTGTTCTCTCTCTCTCCTTACTCTTGATTTCCATTTTTATTACGTATCAACTTACCATGTTGTCAACTTTGTTTTCTTCTATGTCTGATATTCATTTTGGTGATCTACGCCCCCTTTGTATTTCTTTTGCATCTCTTTAGCTGCACATACTAATATAATAATACACCGCTTCCATATTTAACAATTTTGTTTAAAGTTGTAGATTGATGGCCTGGCTGTGACTTTTGCATTATAGGACATCTCTCAGTTTCATCTGATTAAGTAACCTTAAGAATGATTGATAATGTATTTTACAATGTTAATTCCGCACGTATTTTTATTTTAGTGTGCAATATTTCACATCATCACATCACATGGCATGTCAGTGCCATTTGCGTTGTAACACCACAACAGTATCTCTTCCAATTTCGTCTCAAATGAACAACCTTCAGAGGGAGAAATATCATAATGTAATGGAGAAAACTGTTCCTCTTAGTACTTTTCTGGGTCATCAACAATATGAAATCCATGTCTGTTTTTGTTGATCCATTTTCTTGCCTGGCACATAACGGTGTCTGACCTCTTATTTCAGGGACTCATGGTCTTAGATCCGATATCCGTGACATCACAAATCACATTGAGAACCTCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATGGAGGTCTGTGATTCCACAATTCATTGTCCAAAAGATATCCTAAACCGTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGTCGCACTCACAAGCGGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATGGGTCGAGTAGGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTCTAGATAGTGAAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGGCAAAAACATCTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAACTTCTGGTTCCCTTGGACAAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCACAGCAACTATTCTCCATGGACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACGAATCTTTTCTTCTAAGAACACCTCAAGGTATGCAGTTCATGAAGGAAAAAAGCTTTTAACCATACCAATTTCCTTTTGATAAACTCAAGCCCTTCTGATCAATTTCAATTGTATTAATCTCCATGAGTTCTTGCTATGAGCTTGTCAATTGTATTAAGTTCTTGCTATGAGCTTGCTGTTGACATGTTATATTGGAGAAGCATAAAAGCTTTACTGGAGTGGTGCTTCTCTGTCATACATCACTCTAGCAAAACCTAAGAATGTGGGATTTTTTTATTCCTTTTTTTTTTCTTTTTGACACTGGAGCTAGTTGCATGTAGGTTTTACTATCAACCTTAATTACTAGTAATTGCATGCTTGATATACTTAGTTTAATTGTTACAATTTGATGATAAATTGCTGATGTGGAGCTTTTTATGAGCAGCATCACCAAAGGTATTGCAGGCTGCTGAGATCCTATGTGACATGAGAAGCAGCATGGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTTATG AAGGCCCGCAAGCCTTCAT CCCCATTTGGTACAGCCGAGAGCTCATCTGGATCTCGGAATAGTGATGCAGCTCGTGCCGGAAATAATCACTCCACCAAGAAAATAGTTGATAGGAAGAATGATTCTGTACGCATGAATAACCCTGGGAAAGGATCTATTAGGTGGCCTGTTCCTATTGAAGATGGCGCATCTCCTGTCAAGTCTGAGAGAGGGCTTGTGCTTGATATGAGGCAAAACCATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGAGTATGAGAACCAGCAGAAGCTGAGGAAAGCAACATTGACCTCATCTCTAGGATCTGCAGGAGATTGGAATAGGGACAGGAACAAGAGAATGTGAATTGTACATTATTCCCGTTGGAAACCATAGTCTGCGATATATATTGTCTGGGGGCAGCCTAGCCAGACAACTGTTACATAAGAGGTAACAGAACATTGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTATCGGGGCATTTGTTGGTACAATTGTTGTAACAATTGTAGTTCTTTTTATTTGCCATCTTACCGGAGGTCTCTCCCTGTCTCACCATCTTCATTGTGTATTAGTATGTCTCGATCTACTTTCAGCCAAAGTAATAATAGCACGGGTGGTTAATTCCATTGAGGGAAATATTCATGCAATATATTGTCTAATTCAAGTTTATATGTTTCATATGCATTG]
[+] EMBL CB665577             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATCCATTTTCTTGCCTGGCACATAACGGTGTCTGACCTCTTATTTCAGGGACTCATGGTCTTAGATCCGATATCCGTGACATCACAAATCACATTGAGAACCTCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATGGAGGTCTGTGATTCCACAATTCATTGTCCAAAAGATATCCTAAACCGTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGTCGCACTCACAAGCGGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATGGGTCGAGTAGGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTCTAGATAGTGAAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGGCAAAAACATCTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGGATCAACTTCTGGTTCCCTTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF323202             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GACATCACAAATCACATTGAGAACCTCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATGGAGGTCTGTGATTCCACAATTCATTGTCCAAAAGATATCCTAAACCGTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGTCGCACT ACAAGCGGGAGGGTATCGACCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK058601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGCTGAGATCCTATGTGACATGAGAAGCAGCATGGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTTATG AAGGCCCGCAAGCCTTCAT CCCCATTTGGTACAGCCGAGAGCTCATCTGGATCTCGGAATAGTGATGCAGCTCGTGCCGGAAATAATCACTCCACCAAGAAAATAGTTGATAGGAAGAATGATTCTGTACGCATGAATAACCCTGGGAAAGGATCTATTAGGTGGCCTGTTCCTATTGAAGATGGCGCATCTCCTGTCAAGTCTGAGAGAGGGCTTGTGCTTGATATGAGGCAAAACCATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGAGTATGAGAACCAGCAGAAGCTGAGGAAAGCAACATTGACCTCATCTCTAGGATCTGCAGGAGATTGGAATAGGGACAGGAACAAGAGAATGTGAATTGTACATTATTCCCGTTGGAAACCATAGTCTGCGATATATATTGTCTGGGGGCAGCCTAGCCAGACAACTGTTACATAAGAGGTAACAGAACATTGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTATCGGGGCATTTGTTGGTACAATTGTTGTAACAATTGTAGTTCTTTTTATTTGCCATCTTACCGGAGGTCTCTCCCTGTCTCACCATCTTCATTGTGTATTAGTATGTCTCGATCTACTTTCAGCCAAAGTAATAATAGCACGGGTGGTTAATT                                                                ]
[-] EMBL CB665578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGACATGAGAAGCAGCATGGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTTATG AAGGCCCGCAAGCCTTCAT CCCCATTTGGTACAGCCGAGAGCTCATCTGGATCTCGGAATAGTGATGCAGCTCGTGCCGGAAATAATCACTCCACCAAGAAAATAGTTGATAGGAAGAATGATTCTGTACGCATGAATAACCCTGGGAAAGGATCTATTAGGTGGCCTGTTCCTATTGAAGATGGCGCATCTCCTGTCAAGTCTGAGAGAGGGCTTGTGCTTGATATGAGGCAAAACCATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGAGTATGAGAACCAGCAGAAGCTGAGGAAAGCAACATTGCCCTCATCTTTAGGATCTGCAGGAGATTGGAATAGGGACAGGAACAAGAGAATGTGAATTGTCCATTATTCCCGTTGGAAACCATAGTCTGCGATATATATTGTCTGGGGGCAGCCTAGCCAGACAACTGTTACATAAGAGGTAACAGACCATTGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTAT                                                                                                                                                                                                                        ]
[+] EMBL AU092299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gtTTATGAAAGGCCCGCAAGCNTTCATCCCCCATTTGGTACACCCGAGAGCTCATCTGGATCTCGGAATAGTGATGCAGCTCGTGCCGG AATAATCACTCCACCAAGAAAATAGTTGATAGGAAGAATGATTCTGTACGCATGAATAACCCTGGGAAAGGATCTATTAGGTGGCCTGTTCCTATTGAAGATGGCGCATCTCCTGTCAAGTCTGAGAGAGGGCTTGTGCTTGATATGAGGCAAAACCATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGAGTATGAGAACCAGCAGAAGCTGAGGAAAGCAACATTGACCTCATCTCTAGGATCTGCAGGAGATTGGAATAGGGACAGGAACAAGAGAATGTGAATTGTACATTATTCCCGTTGGAAACCATAGTCTGCGATATATATTGTCTGGGGGCAGCCTAGCCAGACAACTGTTACATAAGAGGTAACAGAACATTGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTATCGGGGCATTTGTTGGTACAATTGTTGTAACAATTGTAGTTCTTTTTATTTGCCATCTTACCGGAGGTCTCTCCCTGTCTCACCATCTTCATTGTGTATTAGTATGTCTCGATCTACTTTCAGCCAAAGTAATAATAGCACGGGTGGTTAATTCCATTGAGGGAAAaa                                                 ]
[+] EMBL BM421275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccCAAACCCATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGAGTATGAGAACCAGCAGAAGCTGAGGAAAGCAACATTGACCTCATCTCTAGGATCTGCAGGAGATTGGAATAGGGACAGGAACAAGAGAATATGAATTGTACATTATTCCCGTTGGAAACCATAGTCTGCGATATATATTGTCTGGGGGCAGCGTAGCCAGAC ACTGTTACATAAGAGGTAACAGAACATTGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTATCGGGGCATTTGTTGGTACCATTGTTGTAAC ATTGTAGTTCTTTTTATTTGCCATCTTACCGGAGGTCTCTCCCTGTCTCACCATCTTCATTGTGTATTAGTATGTCTCGATCTACTTTCAGCC AAGTAATAATAGCACGGGTGGTTAATTCCATTGAGGGAAATATTCATGC ATATATTGTCTAATTCAAaa                     ]


>consensus_12288#0 GAGCTGTTGTGAGGGGGAGGGACCTGGCCGTCTAGGTGAGAGGGGGAAACCCCCGGCGGT GGATGGATGCCGTCGAGCTGCCTCTTCCGGCCAAGGTGGATTTCGGGAAGATTTTGACTC CCGCTGCGGTGGAGGGGCTCGAGGGAGGGGGAGGAGGAGGAGGCGGCGGCGGCGGGGGTG GGGATGTTTTGAGGCGCTGCGCAGATGCGGATCGACGGCACGGTGATGTGAAGCAGCACA ATCAGAATGTAGATAGCATTTCATCCTACAGAATTAAAGGGACTTCTTCAGAAGTCCCTA TGCAGAAATCTCTTGCCCTTGGCATCAAGTCTGAAAACAATGGTAAGCGGGATTATATTG GAACTGAAACTGGTCAAGCCTTGCATAAGCAAGATAGCAAAGTACTGACGAAAAAGACCA TAAAGTTGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTA GAGAGACTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGC AATGCACACCATCCGGTAAGTTATCATGTTCCATTGAAATTCTCTGTCAATAGTTTGGAG TGGTATTCCCTTCTCCTTCACCCAGGCAATTCAAGTAGCTTCTTAAGTTCATCTTAGTGG GGTTGGTCTTCTTAGGAGACATTGAGTTATATTCTGACTAGCAGATTTGCAACAATGCTT ACAAATCTCTAGCACTGTCCTATCCAAATAGCATATTCATGGGGCTCTTATCCATTTTCA TCCTTTATAGTTCCTTTCTAAATGTTCATCATCCTGGCCAATGTTTCCGTTCCCATATTC TAATGCGATAGACAACTTACCATGCTCTGAATAAACCAAATCTTATTTATGTTAATGCAC GCACTACTGATCTAAATCCAGTTTAGTATATGCATCTGGCTAGATCTAGTCTACTACTAA TATTCTTGTTGCTATAGTATTCAAGTGATTAAAATGTCCTAGAAACCATGTTTTGTTATA TGACCGACCCTTATTGGTTCTGGTCAAGTGCAAAGCTTTTGATATATTAATTGTATGTAC GCACCATGAGGGGGATTCGTGAATGTTATGTTATATATAGCTCCATTTGATGGCCCATTT TGGATCACAACATTCTTTTTACCATTTTCCTGACTTGGCTTTCATAATCCATGTTTGATG TAATTCTACTTTTGTCTGTGTGGTCATTTGTTTAGTTACTATAGTTCCAGTGCTTCTGTT AACTTCTTTGATATTCTGACAACAAATGCTTTTGCTCTTATCCTAATTGTACAGAAAAAT CTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATTGATAAGAAGAATTTTA GGTCTGGTGCCAGGTCTAAATATGATTGTTTCACATCAAGGGCCAGTTTAGGAAATTTTG ATCCTTGCTTGGGAAACAACACGCTTGGTATGTGGTAACTGGTTGTAGCTACACTGTAAT TTTGTTTATTTATTCATTCTACCTGTTATTATTCCTTTATTGTCTATATTTGCTATGCTG CACTCTCTCACGGCAACCAGAGTCTATTGATTCATTAGAGCTCTTATCAATTAAAACCTG TCAAACATCAATTAGTTAAATATAGAATCAGATATTCCTGATCTGAGACAGTTATTCTTC TAATATGTTTACACACATATGAAATTTCAAAAAATGATTCGAAGAAACATCAGGACTTCA ACTTGAATATTTGCTTATGGTCTTCTCAGGTGAAATGGAGTTCATTTTCCCTTGAAGCAA TTCCCCCCTTTTTTTTGTTTCATCTACCCTTGAACTTTTTCTAAAAAACGGTGCATATTT TCCTTCCTGCTGTGCTTCCTTTTATCTGAAGTCATTGTTTGTGCTGTCAAACTTCTGACA CTCAATCTTTCACAGACCATTGTTTCTAATTTTGTTCTCGAGTAAATTGCACGCACTACG CAAGTTCGTACACCGGAACAGACGTTTTACATGTTCATATACTAGATTACACCCACCTCT CAAGTTTGTGTACCACCGAATTCTCTTTGTTCTCTCTCTCTCCTTACTCTTGATTTCCAT TTTTATTACGTATCAACTTACCATGTTGTCAACTTTGTTTTCTTCTATGTCTGATATTCA TTTTGGTGATCTACGCCCCCTTTGTATTTCTTTTGCATCTCTTTAGCTGCACATACTAAT ATAATAATACACCGCTTCCATATTTAACAATTTTGTTTAAAGTTGTAGATTGATGGCCTG GCTGTGACTTTTGCATTATAGGACATCTCTCAGTTTCATCTGATTAAGTAACCTTAAGAA TGATTGATAATGTATTTTACAATGTTAATTCCGCACGTATTTTTATTTTAGTGTGCAATA TTTCACATCATCACATCACATGGCATGTCAGTGCCATTTGCGTTGTAACACCACAACAGT ATCTCTTCCAATTTCGTCTCAAATGAACAACCTTCAGAGGGAGAAATATCATAATGTAAT GGAGAAAACTGTTCCTCTTAGTACTTTTCTGGGTCATCAACAATATGAAATCCATGTCTG TTTTTGTTGATCCATTTTCTTGCCTGGCACATAACGGTGTCTGACCTCTTATTTCAGGGA CTCATGGTCTTAGATCCGATATCCGTGACATCACAAATCACATTGAGAACCTCTCATTGA GTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAG TTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTG GCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAA GCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCAC AAATGGAGGTCTGTGATTCCACAATTCATTGTCCAAAAGATATCCTAAACCGTTTAACAC TTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAG TTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGT CGCACTCACAAGCGGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATGGGTCGAGTA GGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTCTAGATAGTG AAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGGCAAAAACAT CTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAACTTCTGGTT CCCTTGGACAAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCACAGCAACTAT TCTCCATGGACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACGAATCTTTTC TTCTAAGAACACCTCAAGGTATGCAGTTCATGAAGGAAAAAAGCTTTTAACCATACCAAT TTCCTTTTGATAAACTCAAGCCCTTCTGATCAATTTCAATTGTATTAATCTCCATGAGTT CTTGCTATGAGCTTGTCAATTGTATTAAGTTCTTGCTATGAGCTTGCTGTTGACATGTTA TATTGGAGAAGCATAAAAGCTTTACTGGAGTGGTGCTTCTCTGTCATACATCACTCTAGC AAAACCTAAGAATGTGGGATTTTTTTATTCCTTTTTTTTTTCTTTTTGACACTGGAGCTA GTTGCATGTAGGTTTTACTATCAACCTTAATTACTAGTAATTGCATGCTTGATATACTTA GTTTAATTGTTACAATTTGATGATAAATTGCTGATGTGGAGCTTTTTATGAGCAGCATCA CCAAAGGTATTGCAGGCTGCTGAGATCCTATGTGACATGAGAAGCAGCATGGATGTTTGG AGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTT ATGAAGGCCCGCAAGCCTTCATCCCCATTTGGTACAGCCGAGAGCTCATCTGGATCTCGG AATAGTGATGCAGCTCGTGCCGGAAATAATCACTCCACCAAGAAAATAGTTGATAGGAAG AATGATTCTGTACGCATGAATAACCCTGGGAAAGGATCTATTAGGTGGCCTGTTCCTATT GAAGATGGCGCATCTCCTGTCAAGTCTGAGAGAGGGCTTGTGCTTGATATGAGGCAAAAC CATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGAGTATGAGAAC CAGCAGAAGCTGAGGAAAGCAACATTGACCTCATCTCTAGGATCTGCAGGAGATTGGAAT AGGGACAGGAACAAGAGAATGTGAATTGTACATTATTCCCGTTGGAAACCATAGTCTGCG ATATATATTGTCTGGGGGCAGCCTAGCCAGACAACTGTTACATAAGAGGTAACAGAACAT TGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTATCGGGGCATTTGTTGGTACAA TTGTTGTAACAATTGTAGTTCTTTTTATTTGCCATCTTACCGGAGGTCTCTCCCTGTCTC ACCATCTTCATTGTGTATTAGTATGTCTCGATCTACTTTCAGCCAAAGTAATAATAGCAC GGGTGGTTAATTCCATTGAGGGAAATATTCATGCAATATATTGTCTAATTCAAGTTTATA TGTTTCATATGCATTG



consensusID : consensus_12288#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1381
fasta sequence
                              [GAAACTGGTCAAGCCTTGCATAAGCAAGATAGCAAAGTACTGACGAAAAAGACCATAAAGTTGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTAGAGAGACTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGCAATGCACACCATCCGAAAAATCTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATTGATAAGAAGAATTTTAGGTCTGGTGCCAGGTCTTAAATATGATTGTTTCACATCAAGGGCCAGTTTAGGGAAATTTTGATCCTTGCTTGGGAAACAACACGCTTNGGGACTCATGGTCTTAGGATCCGATATCCGTGACATCACAAATCACATTGAGGAACCTCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATNNNNNTCTGTGATTCCACAATTCATTGTCCAAANGNTATCCTAAACCGTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGTCGCACTCACAAGCAGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATGGGTCGAGTAGGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTCTAGATAGTGAAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGGCAAAAACATCTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAACTTCTGGTTCCCTTGGACAAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCACAGCAACTATTCTCCATGGACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACGAATCTTTTCTTCTAAGAACACCTCAAGCATCACCAAAGGTATTGCAGGCTGCTGAGATCCTATGTGACATGAGAAGCAGCATGGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTTATGAAGGCCCGCAAGCCTTCATCCCCATTTGGTACAGCCGAGAGCTC]

[+] EMBL C26327               [GAAACTGGTCAAGCCTTGCATAAGCAAGATAGCAAAGTACTGACGAAAAAGACCATAAAGTTGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTAGAGAGACTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGCAATGCACACCATCCGAAAAATCTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATTGATAAGAAGAATTTTAGGTCTGGTGCCAGGTCTTAAATATGATTGTTTCACATCAAGGGCCAGTTTAGGGAAATTTTGATCCTTGCTTGGGAAACAACACGCTTNGGGACTCATGGTCTTAGGATCCGATATCCGTGACATCACAAATCACATTGAGGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF197148             [                                                                                                                                   GAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGCAATGCACACCATCCGAAAAATCTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATTGATAAGAAGAATTTTAGGTCTGGTGCCAGGTC TAAATATGATTGTTTCACATCAAGGGCCAGTTTA GGAAATTTTGATCCTTGCTTGGGAAACAACACACTT GGGACTCATGGTCTTA GATCCGATATCCGTGACATCACAAATCACATTGA GAACCTCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATNNNNNTCTGTGATTCCACAATTCATTGTCCAAANGNTATCCTAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB000380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aCCTAAACTTCCTACAGCAAGCACGTCCAGCTGTGCTTGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATGGAGGTCTGTGATTCCACAATTCATTGTCCAAAAGATATCCTAAACCGTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGTCGCACTCACAAGCAGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATGGGTCGAGTAGGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTCTAGATAGTGAAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGGCAAAAACATCTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAACTTCTGGTTCCCTTGGACAAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCACAGCAACTATTCTCCATGGACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACGAATCTTTTCTTCTAAGAACACCTCAAGCATCACCAAAGGTATTGCAGGCTGCTGAGATCCTATGTGACATGAGAAGCAGCATGGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTTATGAAGGCCCGCAAGCCTTCATCCCCATTTGGTACAGCCGAGAGCTC]


>consensus_12288#1 GAAACTGGTCAAGCCTTGCATAAGCAAGATAGCAAAGTACTGACGAAAAAGACCATAAAG TTGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTAGAGAG ACTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGCAATGC ACACCATCCGAAAAATCTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATT GATAAGAAGAATTTTAGGTCTGGTGCCAGGTCTTAAATATGATTGTTTCACATCAAGGGC CAGTTTAGGGAAATTTTGATCCTTGCTTGGGAAACAACACGCTTNGGGACTCATGGTCTT AGGATCCGATATCCGTGACATCACAAATCACATTGAGGAACCTCTCATTGAGTGAACTTC TCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAGGAAAGAAAGTTTTGCGCA CAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCATGCTATCTGGCAGGGACA GTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTCCTACAGCAAGCACGTCCA GCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGGGCCCTTCACAAATNNNNN TCTGTGATTCCACAATTCATTGTCCAAANGNTATCCTAAACCGTTTAACACTTCCCCAAG GACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTTCTGCTGCAGTTAAGCCTT CTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCATTTCCTTGGTCGCACTCAC AAGCAGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATGGGTCGAGTAGGAGTAACA CCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTCTAGATAGTGAAGATCCGT CTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGGCAAAAACATCTATAATGG ATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAACTTCTGGTTCCCTTGGAC AAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCACAGCAACTATTCTCCATGG ACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACGAATCTTTTCTTCTAAGAA CACCTCAAGCATCACCAAAGGTATTGCAGGCTGCTGAGATCCTATGTGACATGAGAAGCA GCATGGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCAC CTTCTGAGAAGGTTATGAAGGCCCGCAAGCCTTCATCCCCATTTGGTACAGCCGAGAGCT C



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12288#0      GAGCTGTTGTGAGGGGGAGGGACCTGGCCGTCTAGGTGAGAGGGGGAAACCCCCGGCGGT 60
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GGATGGATGCCGTCGAGCTGCCTCTTCCGGCCAAGGTGGATTTCGGGAAGATTTTGACTC 120
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      CCGCTGCGGTGGAGGGGCTCGAGGGAGGGGGAGGAGGAGGAGGCGGCGGCGGCGGGGGTG 180
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GGGATGTTTTGAGGCGCTGCGCAGATGCGGATCGACGGCACGGTGATGTGAAGCAGCACA 240
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ATCAGAATGTAGATAGCATTTCATCCTACAGAATTAAAGGGACTTCTTCAGAAGTCCCTA 300
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGCAGAAATCTCTTGCCCTTGGCATCAAGTCTGAAAACAATGGTAAGCGGGATTATATTG 360
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GAACTGAAACTGGTCAAGCCTTGCATAAGCAAGATAGCAAAGTACTGACGAAAAAGACCA 420
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TAAAGTTGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTA 480
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GAGAGACTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGTGCCTGAATTGATGC 540
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      AATGCACACCATCCGGTAAGTTATCATGTTCCATTGAAATTCTCTGTCAATAGTTTGGAG 600
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGGTATTCCCTTCTCCTTCACCCAGGCAATTCAAGTAGCTTCTTAAGTTCATCTTAGTGG 660
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GGTTGGTCTTCTTAGGAGACATTGAGTTATATTCTGACTAGCAGATTTGCAACAATGCTT 720
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ACAAATCTCTAGCACTGTCCTATCCAAATAGCATATTCATGGGGCTCTTATCCATTTTCA 780
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TCCTTTATAGTTCCTTTCTAAATGTTCATCATCCTGGCCAATGTTTCCGTTCCCATATTC 840
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TAATGCGATAGACAACTTACCATGCTCTGAATAAACCAAATCTTATTTATGTTAATGCAC 900
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GCACTACTGATCTAAATCCAGTTTAGTATATGCATCTGGCTAGATCTAGTCTACTACTAA 960
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TATTCTTGTTGCTATAGTATTCAAGTGATTAAAATGTCCTAGAAACCATGTTTTGTTATA 1020
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGACCGACCCTTATTGGTTCTGGTCAAGTGCAAAGCTTTTGATATATTAATTGTATGTAC 1080
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GCACCATGAGGGGGATTCGTGAATGTTATGTTATATATAGCTCCATTTGATGGCCCATTT 1140
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGGATCACAACATTCTTTTTACCATTTTCCTGACTTGGCTTTCATAATCCATGTTTGATG 1200
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TAATTCTACTTTTGTCTGTGTGGTCATTTGTTTAGTTACTATAGTTCCAGTGCTTCTGTT 1260
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      AACTTCTTTGATATTCTGACAACAAATGCTTTTGCTCTTATCCTAATTGTACAGAAAAAT 1320
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      CTCGTCTGCTGAAGCAGAAGCGCATTTATGATCCAAAGAGAATTGATAAGAAGAATTTTA 1380
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GGTCTGGTGCCAGGTCTAAATATGATTGTTTCACATCAAGGGCCAGTTTAGGAAATTTTG 1440
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ATCCTTGCTTGGGAAACAACACGCTTGGTATGTGGTAACTGGTTGTAGCTACACTGTAAT 1500
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TTTGTTTATTTATTCATTCTACCTGTTATTATTCCTTTATTGTCTATATTTGCTATGCTG 1560
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      CACTCTCTCACGGCAACCAGAGTCTATTGATTCATTAGAGCTCTTATCAATTAAAACCTG 1620
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TCAAACATCAATTAGTTAAATATAGAATCAGATATTCCTGATCTGAGACAGTTATTCTTC 1680
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TAATATGTTTACACACATATGAAATTTCAAAAAATGATTCGAAGAAACATCAGGACTTCA 1740
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ACTTGAATATTTGCTTATGGTCTTCTCAGGTGAAATGGAGTTCATTTTCCCTTGAAGCAA 1800
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TTCCCCCCTTTTTTTTGTTTCATCTACCCTTGAACTTTTTCTAAAAAACGGTGCATATTT 1860
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TCCTTCCTGCTGTGCTTCCTTTTATCTGAAGTCATTGTTTGTGCTGTCAAACTTCTGACA 1920
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      CTCAATCTTTCACAGACCATTGTTTCTAATTTTGTTCTCGAGTAAATTGCACGCACTACG 1980
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      CAAGTTCGTACACCGGAACAGACGTTTTACATGTTCATATACTAGATTACACCCACCTCT 2040
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      CAAGTTTGTGTACCACCGAATTCTCTTTGTTCTCTCTCTCTCCTTACTCTTGATTTCCAT 2100
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TTTTATTACGTATCAACTTACCATGTTGTCAACTTTGTTTTCTTCTATGTCTGATATTCA 2160
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TTTTGGTGATCTACGCCCCCTTTGTATTTCTTTTGCATCTCTTTAGCTGCACATACTAAT 2220
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ATAATAATACACCGCTTCCATATTTAACAATTTTGTTTAAAGTTGTAGATTGATGGCCTG 2280
consensus_12288#1      -----------------------------------------------------GAAACTG 7
                                                                                ***

consensus_12288#0      GCTGTGACTTTTGCATTATAGGACATCTCTCAGTTTCATCTGATTAAGTAACCTTAAGAA 2340
consensus_12288#1      GTCAAGCCTT--GCATAA-GCAAGATAGCAAAGTACTGACGA---AAAAGACCATAAAGT 61
                       *    * ***  **** *    * **  *  ***     *     **   *** ***   

consensus_12288#0      TGATTGAT--AATGTATTTTACAATGTTAATTCCGCACGTATTTTTATTT--TAGTGTG- 2395
consensus_12288#1      TGGATGCTCCACCATGTTCGAAAAGGCCAAAGCTAGAGCCAGTACAAATCACTAGAGAGA 121
                       **  ** *  *   * **  * ** *  **  *   *   * *   * *   *** * * 

consensus_12288#0      CAATATTTCACA-TCATCACATCACATGGCATGTCAGTGCCATTTGCGTTGTAACACCAC 2454
consensus_12288#1      CTGAATCAAAGAGCCATGATTTCTTGTTGCAGAAAAATGT-GCCTGAATTGATGCAATGC 180
                       *   **   * *  *** *  **   * ***    * **     **  ***   **   *

consensus_12288#0      AACAGTATCTCTTCCAATTTCGTCTCAAATGAACAACCTTCAGAGGGAGAAATATCATAA 2514
consensus_12288#1      A-CACCATC-CGAAAAATCTCGTCT--GCTGAAGCAGAAGCGCATTTATGATCCAAAGAG 236
                       * **  *** *    *** ******    ****  *    *  *   *  *     * * 

consensus_12288#0      TGTAATGGAGAAAACTGTTCCTCTTAGTACTTT-TCTGGGTCATCAACAATATGAAATCC 2573
consensus_12288#1      AATTGATAAGAAGAATTTTAGGTCTGGTGCCAGGTCTTAAATATGATTGTTTCACATCAA 296
                         *     **** * * **     * ** *    ***     ** *    *    *    

consensus_12288#0      ATGTCTGTTTTTGTTGATCCATTTTCTTGCCTGGCACATAACGGTGTCTGACCTCTTATT 2633
consensus_12288#1      GGGCCAGTTTAGGGAAATTTTGATCCTTGCTTGGGAAACAACA---------CGCTTN-- 345
                         * * ****  *   **     * ***** *** * * ***          * ***   

consensus_12288#0      TCAGGGACTCATGGTCTTAG-ATCCGATATCCGTGACATCACAAATCACATTGAG-AACC 2691
consensus_12288#1      ---GGGACTCATGGTCTTAGGATCCGATATCCGTGACATCACAAATCACATTGAGGAACC 402
                          ***************** ********************************** ****

consensus_12288#0      TCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAG 2751
consensus_12288#1      TCTCATTGAGTGAACTTCTCAATGGAACTTACAAATATTCCAGCTTAGGAAGAGAAAAAG 462
                       ************************************************************

consensus_12288#0      GAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCA 2811
consensus_12288#1      GAAAGAAAGTTTTGCGCACAAAAGATGAACTTCTAGTCTCTGTCAGAAAAGCTTTTTCCA 522
                       ************************************************************

consensus_12288#0      TGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTC 2871
consensus_12288#1      TGCTATCTGGCAGGGACAGTTATAGTAAGGATCCTAACTTCCTCCTGAGCCCTAAACTTC 582
                       ************************************************************

consensus_12288#0      CTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGG 2931
consensus_12288#1      CTACAGCAAGCACGTCCAGCTGTGATGGCAAAGACCAATGTACTGACAAACCAATGAAGG 642
                       ************************************************************

consensus_12288#0      GCCCTTCACAAATGGAGGTCTGTGATTCCACAATTCATTGTCCAAAAGATATCCTAAACC 2991
consensus_12288#1      GCCCTTCACAAATNNNNNTCTGTGATTCCACAATTCATTGTCCAAANGNTATCCTAAACC 702
                       *************     **************************** * ***********

consensus_12288#0      GTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTT 3051
consensus_12288#1      GTTTAACACTTCCCCAAGGACAGGATCTAGACTCTCTTTTATCACCTGGATGTGAGAGTT 762
                       ************************************************************

consensus_12288#0      CTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCAT 3111
consensus_12288#1      CTGCTGCAGTTAAGCCTTCTTTACCTTCCGTGACAACTCATGGAGCTAGTTTGCCACCAT 822
                       ************************************************************

consensus_12288#0      TTCCTTGGTCGCACTCACAAGCGGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATG 3171
consensus_12288#1      TTCCTTGGTCGCACTCACAAGCAGGAGGGTATCGACCAGGTGCTGACTGTGGTAAACATG 882
                       ********************** *************************************

consensus_12288#0      GGTCGAGTAGGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTC 3231
consensus_12288#1      GGTCGAGTAGGAGTAACACCCAATGGCAGTGGGTGAGAGTTGGAAGCAATCTCACTGCTC 942
                       ************************************************************

consensus_12288#0      TAGATAGTGAAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGG 3291
consensus_12288#1      TAGATAGTGAAGATCCGTCTGTGCATAAAATTGATGATCTTCTTCAAGAAATGGATACGG 1002
                       ************************************************************

consensus_12288#0      CAAAAACATCTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAA 3351
consensus_12288#1      CAAAAACATCTATAATGGATTCGTATGGCAAACAATCTAGTTTATGCTGCACGGAATCAA 1062
                       ************************************************************

consensus_12288#0      CTTCTGGTTCCCTTGGACAAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCAC 3411
consensus_12288#1      CTTCTGGTTCCCTTGGACAAATTATTCAATCAAGAAAAAAGTTGAATGGGCATAATCCAC 1122
                       ************************************************************

consensus_12288#0      AGCAACTATTCTCCATGGACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACG 3471
consensus_12288#1      AGCAACTATTCTCCATGGACAATGTAGATTCGTCAGATAGCTTCCAGAAGAATGATAACG 1182
                       ************************************************************

consensus_12288#0      AATCTTTTCTTCTAAGAACACCTCAAGGTATGCAGTTCATGAAGGAAAAAAGCTTTTAAC 3531
consensus_12288#1      AATCTTTTCTTCTAAGAACACCTCAAG-----CA--TCACCAAAGGTA-----TTGCAGG 1230
                       ***************************     **  ***  ** *  *     **  *  

consensus_12288#0      CATACCAATTTCCTTTTGATAAACTCAAGCCCTTCTGATCAATTTCAATTGTATTAATCT 3591
consensus_12288#1      CTGCTGAGATCCTATGTGACA----TGAG-------AAGCAGCATGGATGTTTGGAGTCC 1279
                       *     *  * *  * *** *      **        * **   *  **  *   * ** 

consensus_12288#0      CCATGAGTTCTTGCTATGAGCTTGTCAATTGTATTAAGTT-CTTGCTATGAGCTTGCTGT 3650
consensus_12288#1      GCAGGTATTCA-GCAATGGGACAATCAAGTGGCCAAAGTCACCTTCTGAGAAGGTTATGA 1338
                        ** *  ***  ** *** *    **** **    ****  * * **  **   *  ** 

consensus_12288#0      TGACATGTTATATTGGAGAAGCATAAAAGCTTTACTGGAGTGGTGCTTCTCTGTCATACA 3710
consensus_12288#1      AGGCCCGCAAGCCTTCATCCCCATTTGG--TACAGCCGAGAGCTC--------------- 1381
                        * *  *  *   *  *    ***      *  *   *** * *                

consensus_12288#0      TCACTCTAGCAAAACCTAAGAATGTGGGATTTTTTTATTCCTTTTTTTTTTCTTTTTGAC 3770
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ACTGGAGCTAGTTGCATGTAGGTTTTACTATCAACCTTAATTACTAGTAATTGCATGCTT 3830
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GATATACTTAGTTTAATTGTTACAATTTGATGATAAATTGCTGATGTGGAGCTTTTTATG 3890
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      AGCAGCATCACCAAAGGTATTGCAGGCTGCTGAGATCCTATGTGACATGAGAAGCAGCAT 3950
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GGATGTTTGGAGTCCGCAGGTATTCAGCAATGGGACAATCAAGTGGCCAAAGTCACCTTC 4010
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGAGAAGGTTATGAAGGCCCGCAAGCCTTCATCCCCATTTGGTACAGCCGAGAGCTCATC 4070
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGGATCTCGGAATAGTGATGCAGCTCGTGCCGGAAATAATCACTCCACCAAGAAAATAGT 4130
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGATAGGAAGAATGATTCTGTACGCATGAATAACCCTGGGAAAGGATCTATTAGGTGGCC 4190
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TGTTCCTATTGAAGATGGCGCATCTCCTGTCAAGTCTGAGAGAGGGCTTGTGCTTGATAT 4250
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GAGGCAAAACCATGTCAATGCTGCAAGGCATCCGAATCAGGTGTCATCGCAGGCAAAGGA 4310
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GTATGAGAACCAGCAGAAGCTGAGGAAAGCAACATTGACCTCATCTCTAGGATCTGCAGG 4370
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      AGATTGGAATAGGGACAGGAACAAGAGAATGTGAATTGTACATTATTCCCGTTGGAAACC 4430
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ATAGTCTGCGATATATATTGTCTGGGGGCAGCCTAGCCAGACAACTGTTACATAAGAGGT 4490
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      AACAGAACATTGGGAGATGCGATAATTTAGGTGGCGCATGATGTATTTATCGGGGCATTT 4550
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      GTTGGTACAATTGTTGTAACAATTGTAGTTCTTTTTATTTGCCATCTTACCGGAGGTCTC 4610
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      TCCCTGTCTCACCATCTTCATTGTGTATTAGTATGTCTCGATCTACTTTCAGCCAAAGTA 4670
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      ATAATAGCACGGGTGGTTAATTCCATTGAGGGAAATATTCATGCAATATATTGTCTAATT 4730
consensus_12288#1      ------------------------------------------------------------
                                                                                   

consensus_12288#0      CAAGTTTATATGTTTCATATGCATTG 4756
consensus_12288#1      --------------------------
                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)