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Oryza sativa
cluster # 12292 cluster # 12292       Sequences # 10       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12292#0 length = 3270 sequences # 9  
 consensus_12292#1 length = 236 sequences # 1  
consensusID : consensus_12292#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 3270
fasta sequence 
                              [TCTGCCGNAAACTCTCCCAAACCCCAAGTCCCCAACCATGGCGACCGCCGCCGACCAAAACCCTAACGACGCGGAGCACCGGGAGGCCGCGGCGGGAGCCAATGCGGCGGCGGAGGAGTACGAGGAGGAGGATGAGGAGGAGGAGGAGGTGGAGCTGGACGGGCCGGCAGCCGTGGCGGCGGA-CGGGAGAAGGTGCAGGCCGTGTTCAAGCGGCTGTCGTCGGACCCCGTGGGCATCCGCGTCCACGACGTGATCATCAAGGGCAACGCCAAGACGAAGGAGGAGCTCATCGAGGCGGAGGTCGCCGAGCTCCTCCGCGCCGCCCCCACCGTGCAGGACCTGCTGCGCAACGCCAGCATCGCCAGCGCGCGCCTGCGCCAGCTCGACGTGTTCGACTCCGTCAACATCACGCTCGACGCCGGCCCACCAGAGCTGCCCGGCACCACCAACGTCGTCGTCGAGGTCGTCGAGGCCGCCAACCCTATCACGGGGAGTGCGGGAGTATACTCCAAGCCTGAGGCAAGATCTTGGTCACTTGAAGGCTCGGTTAAGTTGAAGAACCTGTTTGGCTATGGTGACATCTGGGATGCTTCAGGTGCATACAGTTGGGATCAGACATCTGAGGTTGGCATTGGAGTGTCCCTGCCAAGATTTAAATCAATATCAACACCCTTGATGGCTCGGGCGTCATTGTCGTCCCAAGATTGGCTGAAATTTTCTTCTTACAAGGAGCGCCTGCTTGGCCTTTCATTTGGTTTGATTTCAACCATGCAACATGATTTGTCTTATAATCTTACATGGCGTACCTTAACTGATCCATCACAAGTCTCATCGAAGTCCATAAGGAGGCAATTAGGGCACAATCTTCTCTCTGCGTTGAAATATACATACAAGATTGATCAAAGGAATTCACATCTCAGGCCAACAAAAGGATACGCGTTTCTCTCAACTTCTCAAGTTGGAGGTCTATGGGATAGCAAAGGGTTGAGATTTTTCCGCCAGGAGTTTGAT-GTTCGTGGTGCTGTACCTTTGGGATTCTATAATAGTGCTCTCAATGTTGGCCTTGGAGTGGGTGCCATTCTTCCACTGGGGAGAGGATTTATGAATCTATCTTCATCTGTGCCTGATAGATTTTACCTCGGAGGTCATTCTTCTCCAGTTTGCAGCTTGAGTGGACTGTCATCCTTGTTGGGTTTCAGAACAAGAGGGATTGGTCCAACAGAACCACGGAGGCTTGT-CCCTAGTGAATCTGA-GGAT-GGATCTGCTGCCTCACCA-GGGCGGGATTACTTGGGTGGTGATCTTGCTGTCTCTGCCTTTGCTGACCTTTCGTTTGATTTGCCTCTGAAGATATTTAGAGATGCTGGAATACATGGTCATGCATTTCTAACTGCTGGGAACCTTGCGAAACTGTCGGAGGGTGAGTATAAGAAGTTCTCACTTTCTGAATTTGGGCGTACATTTA-GGAGCTCTGCAGGTGTTGGCATTATTTTGCCTACTAAGCTTTTCCGAGTGGAGGTGAACTACTGTTACATTTTGAAGCAGGCTGAGCATGACTCTGGGAGAACGGGAATACAGTTCAGCTTTTCGTCACCCCTGTAGTGACCAGAAATACCTTTTAGCCAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATCAAACTTCCCAACAAACATATTTGCATTTCATTGACTTCACCTGTGCTATGACGCTCTTTTATCGGCACGAGGAGCCTAGAGTATCTAATACTGTTCGGCATTTTGCACTTCTGAGAAGTTTTCCCTTCTTTTTGCACCAAGTGATGTCAAGAACAACGTTTGTACAACTGGAATACAAATGCTGCAATTGGTGGAGGCAATAAAATTTTTGGGAAACTGTTTAGACCAAAAAAACTTTGGTTCGTGCACTCATATGTTGGTATGTTTGCCAGTCCTGCATGGTAATTATACCAGGGATTGTCTTCATCATTCATAGGGAACCGTTTCGATTCTGATGAAATGTCTGGTATGATGCTTGCTTGTACACTAGTCGAAATCTTTCTAACTACACATTTTCCACATGCCATAAACTACTGGAGTGGTACACTAGTTTCTGGACGCAGCGGAGTTGAGGGCGGCTCGACGCTGCCGGAGTTTCTGGACGGTGGCAAACAGCCATTGGTTGCACCCGGAGACTGCTATGAGCGGTCACGCGCTTACGAGTAACAGGGACACCGTGTAGGCGTTCTACCAAGGCTGGACGAGTGGATGGATTATGGATATCGACGTTATGCTGCAAAGTTCTACTCGAACTTGCCAAGAAAATTCTGATTACCCAGCAAAATCCAAAGCCATCTCCGCCAGCCGAACCCCAACGAAAACAGACACAAGACCGGTGCTACACCCAGAGGCCATCACTTCAGAGTACAACAATTCAGCAGAGGAAACCAAAGCTTTCCTGCCAGGAACATACGACACGCTAGTACTCTAACCGCAGTCAACAGCCTTTTACAGCTGAGACGGCACAGAGCAATATTGTGGGTAGTTCGGCACCGGCAAGACCGTCAGTAAAGTTTGGTGGCGCTGCCTGCCTGACGGCCTCCGGCCGGTGGCGCGGCGCCCCCCATGATCTCTTGTCGAAGCAACAGGTGAAGGCAAAAGCATGCAGCTCGCAACAGAAAGGCGACGGGTGACAGATCGCGGACGATCTGTCTGGGCAACAGGTGGGACGGTTGGTGGCCATTTCATGTCACGCTTCTCGCGATCATACTATGATTTCTGCACAGAAATGGACTGAAATAGGAGTTGATACATGTCCCATGACTAGATCACTAGACTTCAGGGGAGAAGAATGAGGGAGCCGGATGCGACTCAAACATCATACTCCTGATCAGATATACGGAAAGTGAGCACAAGCCACACAGGATCTATCAAAGTCCCAAAAGACTAACCTTTGAAAGAAGGTTCATTGTATGACTTGGACTCACCCAATGACAGACATTTTGCTCCCTTTCATGGGTACCTCGCCGACTATTTAACAGAGCAGAACGTTCAACTTCACCAGGGTATCAGCCTTGAATATTATGTGCCCAAGAATAGCAAGTTACTGGTTTTGTCCAGCAGTAGTTTTTCAGTCTCAACTACTTGAAGAAAATGTCAATGACCGATGTTATATCATCTGTAATTCTGCAAACGTACCCAATTCTTGCTAATTCAGAGTTGTAAAGACTGATCGACCGTGCGTAACCATTTAAGGCAACAATGGAACAT]

[+] EMBL AK069780             [TCTCCCCGAAACTCTCCCAAACCCCAAGTCCCCAACCATGGCGACCGCCGCCGACCAAAACCCTAACGACGCGGAGCACCGGGAGGCCGCGGCGGGAGCCAATGCGGCGGCGGAGGAGTACGAGGAGGAGGATGAGGAGGAGGAGGAGGTGGAGCTGGACGGGCCGGCAGCCGTGGCGGCGGAGCGGGAGAAGGTGCAGGCCGTGTTCAAGCGGCTGTCGTCGGACCCCGTGGGCATCCGCGTCCACGACGTGATCATCAAGGGCAACGCCAAGACGAAGGAGGAGCTCATCGAGGCGGAGGTCGCCGAGCTCCTCCGCGCCGCCCCCACCGTGCAGGACCTGCTGCGCAACGCCAGCATCGCCAGCGCGCGCCTGCGCCAGCTCGACGTGTTCGACTCCGTCAACATCACGCTCGACGCCGGCCCACCAGAGCTGCCCGGCACCACCAACGTCGTCGTCGAGGTCGTCGAGGCCGCCAACCCTATCACGGGGAGTGCGGGAGTATACTCCAAGCCTGAGGCAAGATCTTGGTCACTTGAAGGCTCGGTTAAGTTGAAGAACCTGTTTGGCTATGGTGACATCTGGGATGCTTCAGGTGCATACAGTTGGGATCAGACATCTGAGGTTGGCATTGGAGTGTCCCTGCCAAGATTTAAATCAATATCAACACCCTTGATGGCTCGGGCGTCATTGTCGTCCCAAGATTGGCTGAAATTTTCTTCTTACAAGGAGCGCCTGCTTGGCCTTTCATTTGGTTTGATTTCAACCATGCAACATGATTTGTCTTATAATCTTACATGGCGTACCTTAACTGATCCATCACAAGTCTCATCGAAGTCCATAAGGAGGCAATTAGGGCACAATCTTCTCTCTGCGTTGAAATATACATACAAGATTGATCAAAGGAATTCACATCTCAGGCCAACAAAAGGATACGCGTTTCTCTCAACTTCTCAAGTTGGAGGTCTATGGGATAGCAAAGGGTTGAGATTTTTCCGCCAGGAGTTTGAT GTTCGTGGTGCTGTACCTTTGGGATTCTATAATAGTGCTCTCAATGTTGGCCTTGGAGTGGGTGCCATTCTTCCACTGGGGAGAGGATTTATGAATCTATCTTCATCTGTGCCTGATAGATTTTACCTCGGAGGTCATTCTTCTCCAGTTTGCAGCTTGAGTGGACTGTCATCCTTGTTGGGTTTCAGAACAAGAGGGATTGGTCCAACAGAACCACGGAGGCTTGT CCCTAGTGAATCTGA GGAT GGATCTGCTGCCTCACCA GGGCGGGATTACTTGGGTGGTGATCTTGCTGTCTCTGCCTTTGCTGACCTTTCGTTTGATTTGCCTCTGAAGATATTTAGAGATGCTGGAATACATGGTCATGCATTTCTAACTGCTGGGAACCTTGCGAAACTGTCGGAGGGTGAGTATAAGAAGTTCTCACTTTCTGAATTTGGGCGTACATTTA AGAGCTCTGCAGGTGTTGGCATTATTTTGCCTACTAAGCTTTTCCGAGTGGAGGTGAACTACTGTTACATTTTGAAGCAGGCTGAGCATGACTCTGGGAGAACGGGAATACAGTTCAGCTTTTCGTCACCCCTGTAGTGACCAGAAATACCTTTTAGCCAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATCAAACTTCCCAACAAACATATTTGCATTTCATTGACTTCACCTGTGCTATGACGCTCTTTTATCGGCACGAGGAGCCTAGAGTATCTAATACTGTTCGGCATTTTGCACTTCTGAGAAGTTTTCCCTTCTTTTTGCACCAAGTGATGTCAAGAACAACGTTTGTACAACTGGAATACAAATGCTGCAATTGGTGGAGGCAATAAAATTTTTGGGAAACTGTTTAGACCGAAGATGCTTTGGTTCGTGCACTCATATGTTGGTATGTTTGCCAGTCCTGCATGGTAATTATACCAGGGATTGTCTTCATCATTCATAGGGAACCGTTTCGATTCTGATGAAATGTCTGGTATGATGCTTGCTTGTACACTAGTCGAAATCTTTCTAACTACACATTTTCCACATGCCATAAACTACTGGAGTGGTACACTAGTTTCTGGACGCAGCGGAGTTGAGGGCGGCTCGACGCTGCCGGAGTTTCTGGACGGTGGCAAACAGCCATTGGTTGCACCCGGAGACTGCTATGAGCGGTCACGCGCTTACGAGTAACAGGGACACCGTGTAGGCGTTCTACCAAGGCTGGACGAGTGGATGGATTATGGATATCGACGTTATGCTGCAAAGTTCTACTCGAACTTGCCAAGAAAATTCTGATTACCCAGCAAAATCCAAAGCCATCTCCGCCAGCCGAACCCCAACGAAAACAGACACAAGACCGGTGCTACACCCAGAGGCCATCACTTCAGAGTACAACAATTCAGCAGAGGAAACCAAAGCTTTCCTGCCAGGAACATACGACACGCTAGTACTCTAACCGCAGTCAACAGCCTTTTACAGCTGAGACGGCACAGAGCAATATTGTGGGTAGTTCGGCACCGGCAAGACCGTCAGTAAAGTTTGGTGGCGCTGCCTGCCTGACGGCCTCCGGCCGGTGGCGCGGCGCCCCCCATGATCTCTTGTCGAAGCAACAGGTGAAGGCAAAAGCATGCAGCTCGCAACAGAAAGGCGACGGGTGACAGATCGCGGACGATCTGTCTGGGCAACAGGTGGGACGGTTGGTGGCCATTTCATGTCACGCTTCTCGCGATCATACTATGATTTCTGCACAGAAATGGACTGAAATAGGAGTTGATACATGTCCCATGACTAGATCACTAGACTTCAGGGGAGAAGAATGAGGGAGCCGGATGCGACTCAAACATCATACTCCTGATCAGATATACGGAAAGTGAGCACAAGCCACACAGGATCTATCAAAGTCCCAAAAGACTAACCTTTGAAAGAAGGTTCATTGTATGACTTGGACTCACCCAATGACAGACATTTTGCTCCCTTTCATGGGTACCTCGCCGACTATTTAACAGAGCAGAACGTTCAACTTCACCAGGGTATCAGCCTTGAATATTATGTGCCCAAGAATAGCAAGTTACTGGTTTTGTCCAGCAGTAGTTTTTCAGTCTCAACTACTTGAAGAAAATGTCAATGACCGATGTTATATCATCTGTAATTCTGCAAACGTACCCAATTCTTGCTAATTCAGAGTTGTAAAGACTGATCGACCGTGCGTAACCATTTAAGGCAACAATGGAACAT]
[+] EMBL AU093667             [   gtCGNAAACTCTCCCAAACCCCAAGTCCCCAACCATGGCGACCGCCGCCGACCAAAACCCTAACGACGCGGA NACCGGGAGGCCGCGGCGGGAGCCAATGCGGCGGCGGAGGAGTACGAGGAGGAGGATGAGGAGGAGGAGGAGGTGGAGCTGGACGGGCCGGCAGCCGTGGCGGCGGA CGGGAGAAGGTGCAGGCCGTGTTCAAGCGGCTGTCGTCGGACCCCGTGGGCATCCGCGTCCACGACGTGATCATCAAGGGCAACGCCAAGACGAANGAGGAGCTCATCGANGCGGAGGTCGCCGAGCTCCTCCGCGCCGCCCCCACCGTGCAGGACCTGCTGCGCAACGCCAGCATCGCCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU085820             [   ngtaNATACTNTCCCAAACCCCAAGTCCCCAACCATGGCGACCGCCGCCGACCAAAACCCTAACGACGCGGAG ACCGGGAGGCCGCGGCGGGAG CAATNCGGCGGCGGAGGAGTACGAGGAGGAGGATGAGGAGGAGGAGGAGGTGGAGCTGGACGGGCCGGCAGCCGTGGCGGCGGA NGGGAGAAGGTNCAGGNCGTGTTCAAGCGGCTGTCGTCGGACCCCGTGGGCATCCGCNTCCACGACGTGATCATCAAGGG NACG CAAGACGAAGGAGGAGCTTATCGAGGCGGAGGTCGnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF323317             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTGGTCACTTGAAGGCTCGGTTAAGTTGAAGAACCTGTTTGGCTATGGTGACATCTGGGATGCTTCAGGTGCATACAGTTGGGATCAGACATCTGAGGTTGGCATTGGAGTGTCCCTGCCAAGATTTAAATCAATATCAACACCCTTGATGGCTCGGGCGTCATTGTCGTCCCAAGATTGGCTGAAATTTTCTTCTTACAAGGAGCGCCTGCTTGGCCTTTCATTTGGTTTGATTTCAACCATGCAACATGATTTGTCTTATAATCTTACATGGCGTACCTTAACTGATCCATCACAAGTCTCATCGAAGTCCATAAGGAGGCAATTAGGGCACAATCTTCTCTCTGCGTTGAAATATACATACAAGATTGATCAAAGGAATTCACATCTCAGGCCAACAAAAGGATACGCGTTTCTCTCAACTTCTCAAGTTGGAGGTCTATGGGATAGCAAAGGGTTGAGATTTTTCCGCCAGGAGTTTGATGGTTCGTGGTGCTGTACCTTTGGGATTCTATAATAGTGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF329957             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTCTCTCTGCGTTGAAATATACATACAAGATTGATCAAAGGAATTCACATCTCAGGCCAACAAAAGGATACGCGTTTCTCTCAACTTCTCAAGTTGGAGGTCTATGGGATAGCAAAGGGTTGAGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF323873             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGGATACGCGTTTCTCTCAACTTCTCAAGTTGGAGGTCTATGGGATAGCAAAGGGTTGAGATTTTTCCGCCAGGAGTTTGAT GTTCGTGGTGCTGTACCTTTGGGATTCTATAATAGTGCTCTCAATGTTGGCCTTGGAGTGGGTGCCATTCTTCCACTGGGGAGAGGATTTATGAATCTATCTTCATCTGTGCCTGATAGATTTTACCTCGGAGGTCATTCTTCTCCAGTTTGCAGCTTGAGTGGACTGTCATCCTTGTTGGGTTTCAGAACAAGAGGGATTGGTCCAACAGAACCACGGAGGCTTGT CCCTAGTGAATCTGA GGAT GGATCTGCTGCCTCACCA GGGCGGGATTACTTGGGTGGTGATCTTGCTGTCTCTGCCTTTGCTGACCTTTCGTTTGATTTGCCTCTGAAGATATTTAGAGATGCTGGAATACATGGTCATGCATTTCTAACTGCTGGGAACCTTGCGAAACTGTCGGAGGGTGAGTATAAGAAGTTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU085819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTCCCCTNATGAATCTGAGGGATGGGATCTGCTGCCTCACCAGGGGCGGGATTACTTGGGTGGTGATNTTGCTGTCTCTGCCTTTGCTGACCTTTNGTTTGATTTGCCTCTGAGGATATTTAGAGATGCTGGAATACATGGTCATGCATTTCTANCTGCTGGGAACCTTGCGAAACTGTCGGAGGGTGAGTATAAGAAGTTCTCACTTTCTGAATTTGGGCGTACATTTAGGGAGCTCTGCAGGTGTTGGCATTATTTTGCNTACTAAGCTTTTCCGAGTGGAGGTGAACTACTGTTACATTTTGAAGCAGGCTGAGCATGACTCTGGGAGAACGGGAATACAGTTCAGCTTTTCGTCACCCCTGTAGTGACCAGAAATACCTTTTAGCCAAAGTTAGCTTCTCCCNTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATCAAACTTCCCAACAAACATATTTGCATTTCATTGACTTCACCTGTGCTATGACGCTCTTTTATCGGCACGAGGAGCCTAGAGTATCTAATACTGTTCGGCATTTTGCACTTCTGAGAAGTTTTCCCTTCTTTTTGCACCAAGTGATGTCAAGAACAACGTTTGTACAACTGGAATACAAATGCTGCAATTGGTGGAGGCAATAAAATTTTTGGGAAACTGTTTAGACCAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF329956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTCTGAATTTGGGCGTACATTTA GGAGCTAGGCAGGTGTTGGCATTATTTTGCTAAGTAAGCTTTTCCGAGTGGAGGTGAATTACTGTTACATTTTGAAGCAGGCTGAGCATGACTCTGGGAGAACGGGAATACAGTTCAGCTTTTCGTCACCCCGGTAGTGACCAGAAATACCTTTTAGCCAAAGTTAGTTTCTCCCGTAGAATGCTATGGCCGCCCCTTATATTCTTTCTTGCTTAATCAACCTTCCCAACAAACATATTTGCATTTCATTGACTTCACCTGTGCTATGACGTTCTTTTATCGGCACGAGGAGCCTAGAGTATTTAATACTGTTCGGCATTTTGCACTTCTGAGAAGTTTTCCCTTCTTTTTGCACCAAGTGATGTCAAGAACAACGTTTGTACAACTGGAATACAAATGCTGCAATTGGTGCAGGCAATAAAATTTTTGGGAAACTGTTTAGACCAAAAAAAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU093668             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGAAATACCTTTTAGCCAAAGTTAGCTTCTCCCGTAGAATGCNATTGCTNCCCCTTATATTCTNTCCTGCTTAATCAAACTTCCCAACAAACATATTTNCATTTCATTGACTTCACCTGTGCTATGACGCTCTTTTATCGGCACGAGGAGCCTAGAGTATCTAATACTGTTCGGCATTTTGCACTTCTGAGAAGTTTTCCCTTCTTTTTGCACCAAGTGATGTCAAGAACAACGTTTGTACAACTGGAATACAAATGCTGCAATTGGTGGAGGCAATAAAATTTTTGGGAAACTGTTTAGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_12292#0
TCTGCCGNAAACTCTCCCAAACCCCAAGTCCCCAACCATGGCGACCGCCGCCGACCAAAA
CCCTAACGACGCGGAGCACCGGGAGGCCGCGGCGGGAGCCAATGCGGCGGCGGAGGAGTA
CGAGGAGGAGGATGAGGAGGAGGAGGAGGTGGAGCTGGACGGGCCGGCAGCCGTGGCGGC
GGACGGGAGAAGGTGCAGGCCGTGTTCAAGCGGCTGTCGTCGGACCCCGTGGGCATCCGC
GTCCACGACGTGATCATCAAGGGCAACGCCAAGACGAAGGAGGAGCTCATCGAGGCGGAG
GTCGCCGAGCTCCTCCGCGCCGCCCCCACCGTGCAGGACCTGCTGCGCAACGCCAGCATC
GCCAGCGCGCGCCTGCGCCAGCTCGACGTGTTCGACTCCGTCAACATCACGCTCGACGCC
GGCCCACCAGAGCTGCCCGGCACCACCAACGTCGTCGTCGAGGTCGTCGAGGCCGCCAAC
CCTATCACGGGGAGTGCGGGAGTATACTCCAAGCCTGAGGCAAGATCTTGGTCACTTGAA
GGCTCGGTTAAGTTGAAGAACCTGTTTGGCTATGGTGACATCTGGGATGCTTCAGGTGCA
TACAGTTGGGATCAGACATCTGAGGTTGGCATTGGAGTGTCCCTGCCAAGATTTAAATCA
ATATCAACACCCTTGATGGCTCGGGCGTCATTGTCGTCCCAAGATTGGCTGAAATTTTCT
TCTTACAAGGAGCGCCTGCTTGGCCTTTCATTTGGTTTGATTTCAACCATGCAACATGAT
TTGTCTTATAATCTTACATGGCGTACCTTAACTGATCCATCACAAGTCTCATCGAAGTCC
ATAAGGAGGCAATTAGGGCACAATCTTCTCTCTGCGTTGAAATATACATACAAGATTGAT
CAAAGGAATTCACATCTCAGGCCAACAAAAGGATACGCGTTTCTCTCAACTTCTCAAGTT
GGAGGTCTATGGGATAGCAAAGGGTTGAGATTTTTCCGCCAGGAGTTTGATGTTCGTGGT
GCTGTACCTTTGGGATTCTATAATAGTGCTCTCAATGTTGGCCTTGGAGTGGGTGCCATT
CTTCCACTGGGGAGAGGATTTATGAATCTATCTTCATCTGTGCCTGATAGATTTTACCTC
GGAGGTCATTCTTCTCCAGTTTGCAGCTTGAGTGGACTGTCATCCTTGTTGGGTTTCAGA
ACAAGAGGGATTGGTCCAACAGAACCACGGAGGCTTGTCCCTAGTGAATCTGAGGATGGA
TCTGCTGCCTCACCAGGGCGGGATTACTTGGGTGGTGATCTTGCTGTCTCTGCCTTTGCT
GACCTTTCGTTTGATTTGCCTCTGAAGATATTTAGAGATGCTGGAATACATGGTCATGCA
TTTCTAACTGCTGGGAACCTTGCGAAACTGTCGGAGGGTGAGTATAAGAAGTTCTCACTT
TCTGAATTTGGGCGTACATTTAGGAGCTCTGCAGGTGTTGGCATTATTTTGCCTACTAAG
CTTTTCCGAGTGGAGGTGAACTACTGTTACATTTTGAAGCAGGCTGAGCATGACTCTGGG
AGAACGGGAATACAGTTCAGCTTTTCGTCACCCCTGTAGTGACCAGAAATACCTTTTAGC
CAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATC
AAACTTCCCAACAAACATATTTGCATTTCATTGACTTCACCTGTGCTATGACGCTCTTTT
ATCGGCACGAGGAGCCTAGAGTATCTAATACTGTTCGGCATTTTGCACTTCTGAGAAGTT
TTCCCTTCTTTTTGCACCAAGTGATGTCAAGAACAACGTTTGTACAACTGGAATACAAAT
GCTGCAATTGGTGGAGGCAATAAAATTTTTGGGAAACTGTTTAGACCAAAAAAACTTTGG
TTCGTGCACTCATATGTTGGTATGTTTGCCAGTCCTGCATGGTAATTATACCAGGGATTG
TCTTCATCATTCATAGGGAACCGTTTCGATTCTGATGAAATGTCTGGTATGATGCTTGCT
TGTACACTAGTCGAAATCTTTCTAACTACACATTTTCCACATGCCATAAACTACTGGAGT
GGTACACTAGTTTCTGGACGCAGCGGAGTTGAGGGCGGCTCGACGCTGCCGGAGTTTCTG
GACGGTGGCAAACAGCCATTGGTTGCACCCGGAGACTGCTATGAGCGGTCACGCGCTTAC
GAGTAACAGGGACACCGTGTAGGCGTTCTACCAAGGCTGGACGAGTGGATGGATTATGGA
TATCGACGTTATGCTGCAAAGTTCTACTCGAACTTGCCAAGAAAATTCTGATTACCCAGC
AAAATCCAAAGCCATCTCCGCCAGCCGAACCCCAACGAAAACAGACACAAGACCGGTGCT
ACACCCAGAGGCCATCACTTCAGAGTACAACAATTCAGCAGAGGAAACCAAAGCTTTCCT
GCCAGGAACATACGACACGCTAGTACTCTAACCGCAGTCAACAGCCTTTTACAGCTGAGA
CGGCACAGAGCAATATTGTGGGTAGTTCGGCACCGGCAAGACCGTCAGTAAAGTTTGGTG
GCGCTGCCTGCCTGACGGCCTCCGGCCGGTGGCGCGGCGCCCCCCATGATCTCTTGTCGA
AGCAACAGGTGAAGGCAAAAGCATGCAGCTCGCAACAGAAAGGCGACGGGTGACAGATCG
CGGACGATCTGTCTGGGCAACAGGTGGGACGGTTGGTGGCCATTTCATGTCACGCTTCTC
GCGATCATACTATGATTTCTGCACAGAAATGGACTGAAATAGGAGTTGATACATGTCCCA
TGACTAGATCACTAGACTTCAGGGGAGAAGAATGAGGGAGCCGGATGCGACTCAAACATC
ATACTCCTGATCAGATATACGGAAAGTGAGCACAAGCCACACAGGATCTATCAAAGTCCC
AAAAGACTAACCTTTGAAAGAAGGTTCATTGTATGACTTGGACTCACCCAATGACAGACA
TTTTGCTCCCTTTCATGGGTACCTCGCCGACTATTTAACAGAGCAGAACGTTCAACTTCA
CCAGGGTATCAGCCTTGAATATTATGTGCCCAAGAATAGCAAGTTACTGGTTTTGTCCAG
CAGTAGTTTTTCAGTCTCAACTACTTGAAGAAAATGTCAATGACCGATGTTATATCATCT
GTAATTCTGCAAACGTACCCAATTCTTGCTAATTCAGAGTTGTAAAGACTGATCGACCGT
GCGTAACCATTTAAGGCAACAATGGAACAT

consensusID : consensus_12292#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence 
                              [CTGACCAGAAATACCTTTTAGCCAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATCAAACTTCCAACAAACATATTGCATTCATGACTTACTGTGCTATGANNCTCTTTTATCGGCACGAGGAGCTAGAGTATCTAATACTGTTCGGCATTTGCACTTCTGAGAGNNNNNNNNNNNNNNGCACAGTGATGTCAAGAACAACGTTGTACAA]

[+] EMBL D42641               [CTGACCAGAAATACCTTTTAGCCAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATCAAACTTCCAACAAACATATTGCATTCATGACTTACTGTGCTATGANNCTCTTTTATCGGCACGAGGAGCTAGAGTATCTAATACTGTTCGGCATTTGCACTTCTGAGAGNNNNNNNNNNNNNNGCACAGTGATGTCAAGAACAACGTTGTACAA]




>consensus_12292#1
CTGACCAGAAATACCTTTTAGCCAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCC
TTATATTCTTTCCTGCTTAATCAAACTTCCAACAAACATATTGCATTCATGACTTACTGT
GCTATGANNCTCTTTTATCGGCACGAGGAGCTAGAGTATCTAATACTGTTCGGCATTTGC
ACTTCTGAGAGNNNNNNNNNNNNNNGCACAGTGATGTCAAGAACAACGTTGTACAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12292#0      TCTGCCGNAAACTCTCCCAAACCCCAAGTCCCCAACCATGGCGACCGCCGCCGACCAAAA 60
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CCCTAACGACGCGGAGCACCGGGAGGCCGCGGCGGGAGCCAATGCGGCGGCGGAGGAGTA 120
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CGAGGAGGAGGATGAGGAGGAGGAGGAGGTGGAGCTGGACGGGCCGGCAGCCGTGGCGGC 180
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GGACGGGAGAAGGTGCAGGCCGTGTTCAAGCGGCTGTCGTCGGACCCCGTGGGCATCCGC 240
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GTCCACGACGTGATCATCAAGGGCAACGCCAAGACGAAGGAGGAGCTCATCGAGGCGGAG 300
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GTCGCCGAGCTCCTCCGCGCCGCCCCCACCGTGCAGGACCTGCTGCGCAACGCCAGCATC 360
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GCCAGCGCGCGCCTGCGCCAGCTCGACGTGTTCGACTCCGTCAACATCACGCTCGACGCC 420
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GGCCCACCAGAGCTGCCCGGCACCACCAACGTCGTCGTCGAGGTCGTCGAGGCCGCCAAC 480
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CCTATCACGGGGAGTGCGGGAGTATACTCCAAGCCTGAGGCAAGATCTTGGTCACTTGAA 540
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GGCTCGGTTAAGTTGAAGAACCTGTTTGGCTATGGTGACATCTGGGATGCTTCAGGTGCA 600
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TACAGTTGGGATCAGACATCTGAGGTTGGCATTGGAGTGTCCCTGCCAAGATTTAAATCA 660
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      ATATCAACACCCTTGATGGCTCGGGCGTCATTGTCGTCCCAAGATTGGCTGAAATTTTCT 720
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TCTTACAAGGAGCGCCTGCTTGGCCTTTCATTTGGTTTGATTTCAACCATGCAACATGAT 780
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TTGTCTTATAATCTTACATGGCGTACCTTAACTGATCCATCACAAGTCTCATCGAAGTCC 840
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      ATAAGGAGGCAATTAGGGCACAATCTTCTCTCTGCGTTGAAATATACATACAAGATTGAT 900
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CAAAGGAATTCACATCTCAGGCCAACAAAAGGATACGCGTTTCTCTCAACTTCTCAAGTT 960
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GGAGGTCTATGGGATAGCAAAGGGTTGAGATTTTTCCGCCAGGAGTTTGATGTTCGTGGT 1020
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GCTGTACCTTTGGGATTCTATAATAGTGCTCTCAATGTTGGCCTTGGAGTGGGTGCCATT 1080
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CTTCCACTGGGGAGAGGATTTATGAATCTATCTTCATCTGTGCCTGATAGATTTTACCTC 1140
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GGAGGTCATTCTTCTCCAGTTTGCAGCTTGAGTGGACTGTCATCCTTGTTGGGTTTCAGA 1200
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      ACAAGAGGGATTGGTCCAACAGAACCACGGAGGCTTGTCCCTAGTGAATCTGAGGATGGA 1260
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TCTGCTGCCTCACCAGGGCGGGATTACTTGGGTGGTGATCTTGCTGTCTCTGCCTTTGCT 1320
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GACCTTTCGTTTGATTTGCCTCTGAAGATATTTAGAGATGCTGGAATACATGGTCATGCA 1380
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TTTCTAACTGCTGGGAACCTTGCGAAACTGTCGGAGGGTGAGTATAAGAAGTTCTCACTT 1440
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TCTGAATTTGGGCGTACATTTAGGAGCTCTGCAGGTGTTGGCATTATTTTGCCTACTAAG 1500
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CTTTTCCGAGTGGAGGTGAACTACTGTTACATTTTGAAGCAGGCTGAGCATGACTCTGGG 1560
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      AGAACGGGAATACAGTTCAGCTTTTCGTCACCCCTGTAGTGACCAGAAATACCTTTTAGC 1620
consensus_12292#1      --------------------------------------CTGACCAGAAATACCTTTTAGC 22
                                                              *********************

consensus_12292#0      CAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATC 1680
consensus_12292#1      CAAAGTTAGCTTCTCCCGTAGAATGCTATTGCTGCCCCTTATATTCTTTCCTGCTTAATC 82
                       ************************************************************

consensus_12292#0      AAACTTCCCAACAAACATATTTGCATTTCATTGACTTCACCTGTGCTATGACGCTCTTTT 1740
consensus_12292#1      AAACTTCC-AACAAACATATT-GCATTCA--TGACTTA--CTGTGCTATGANNCTCTTTT 136
                       ******** ************ *****    ******   ***********  *******

consensus_12292#0      ATCGGCACGAGGAGCCTAGAGTATCTAATACTGTTCGGCATTTTGCACTTCTGAGAAGTT 1800
consensus_12292#1      ATCGGCACGAGGAGC-TAGAGTATCTAATACTGTTCGGCATTT-GCACTTCTGAGAGNNN 194
                       *************** *************************** ************    

consensus_12292#0      TTCCCTTCTTTTTGCACCAAGTGATGTCAAGAACAACGTTTGTACAACTGGAATACAAAT 1860
consensus_12292#1      NNNNNNNNNNN--GCAC--AGTGATGTCAAGAACAACGTT-GTACAA------------- 236
                                    ****  ********************* ******             

consensus_12292#0      GCTGCAATTGGTGGAGGCAATAAAATTTTTGGGAAACTGTTTAGACCAAAAAAACTTTGG 1920
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TTCGTGCACTCATATGTTGGTATGTTTGCCAGTCCTGCATGGTAATTATACCAGGGATTG 1980
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TCTTCATCATTCATAGGGAACCGTTTCGATTCTGATGAAATGTCTGGTATGATGCTTGCT 2040
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TGTACACTAGTCGAAATCTTTCTAACTACACATTTTCCACATGCCATAAACTACTGGAGT 2100
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GGTACACTAGTTTCTGGACGCAGCGGAGTTGAGGGCGGCTCGACGCTGCCGGAGTTTCTG 2160
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GACGGTGGCAAACAGCCATTGGTTGCACCCGGAGACTGCTATGAGCGGTCACGCGCTTAC 2220
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GAGTAACAGGGACACCGTGTAGGCGTTCTACCAAGGCTGGACGAGTGGATGGATTATGGA 2280
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TATCGACGTTATGCTGCAAAGTTCTACTCGAACTTGCCAAGAAAATTCTGATTACCCAGC 2340
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      AAAATCCAAAGCCATCTCCGCCAGCCGAACCCCAACGAAAACAGACACAAGACCGGTGCT 2400
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      ACACCCAGAGGCCATCACTTCAGAGTACAACAATTCAGCAGAGGAAACCAAAGCTTTCCT 2460
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GCCAGGAACATACGACACGCTAGTACTCTAACCGCAGTCAACAGCCTTTTACAGCTGAGA 2520
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CGGCACAGAGCAATATTGTGGGTAGTTCGGCACCGGCAAGACCGTCAGTAAAGTTTGGTG 2580
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GCGCTGCCTGCCTGACGGCCTCCGGCCGGTGGCGCGGCGCCCCCCATGATCTCTTGTCGA 2640
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      AGCAACAGGTGAAGGCAAAAGCATGCAGCTCGCAACAGAAAGGCGACGGGTGACAGATCG 2700
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CGGACGATCTGTCTGGGCAACAGGTGGGACGGTTGGTGGCCATTTCATGTCACGCTTCTC 2760
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GCGATCATACTATGATTTCTGCACAGAAATGGACTGAAATAGGAGTTGATACATGTCCCA 2820
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TGACTAGATCACTAGACTTCAGGGGAGAAGAATGAGGGAGCCGGATGCGACTCAAACATC 2880
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      ATACTCCTGATCAGATATACGGAAAGTGAGCACAAGCCACACAGGATCTATCAAAGTCCC 2940
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      AAAAGACTAACCTTTGAAAGAAGGTTCATTGTATGACTTGGACTCACCCAATGACAGACA 3000
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      TTTTGCTCCCTTTCATGGGTACCTCGCCGACTATTTAACAGAGCAGAACGTTCAACTTCA 3060
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CCAGGGTATCAGCCTTGAATATTATGTGCCCAAGAATAGCAAGTTACTGGTTTTGTCCAG 3120
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      CAGTAGTTTTTCAGTCTCAACTACTTGAAGAAAATGTCAATGACCGATGTTATATCATCT 3180
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GTAATTCTGCAAACGTACCCAATTCTTGCTAATTCAGAGTTGTAAAGACTGATCGACCGT 3240
consensus_12292#1      ------------------------------------------------------------
                                                                                   

consensus_12292#0      GCGTAACCATTTAAGGCAACAATGGAACAT 3270
consensus_12292#1      ------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)