cluster # 12299

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Oryza sativa
cluster # 12299 cluster # 12299 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12299#0 length = 1740 sequences # 1
consensus_12299#1 length = 600 sequences # 7

consensus_12299#2 length = 450 sequences # 1
consensus_12299#3 length = 431 sequences # 1

consensusID : consensus_12299#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1740
fasta sequence

                              [TCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGCAAGCGTCTATGGATATTGAACCTATGATTTCACAAAACTTATTTGCTTGCAAAAACTATATATATGCATAAGTTGAATTGCCTTAAAATGTCGGTAACGGGTAGAGTTGTTTATATCCAAGTTCATGCATTTCCCTTCCTTTAATATATTGTTGCCATGTAACCTTGTCACCTTCAATTGTAAATGGTTAGGATGGTTTATTCTATCATCGAATGCTTAGCCATGCTTAGGTCTACTGTTGTTAGAAATCGATGGATGGAGCCATCGGATGAACTTATTCACCACCCGCGATTTATGGGCATTAAAATCTGATTACCTCACTCAATGATTAATATGGAAACATGCTTTAGCTTGGACGTGTGATAGGGCGATGACGGGATGGTCATTTTCCCTGATGCAAGTAGCCTTGTCTGGGTTGTTAAGGACCGAACATGTTGACGTCTATTCAAGCACCATACGTACTTCCACACACCTTATTTGGGACCGGCTTGTCTTAGTACTATGTTGCACTGTGCTCATCTACGTCTTGCTGGTCATTCGTGAGGGTGGTTTTCCCTTTGGATTGCCCCGGGTGTGCCTGATTTTGGCAGGGGGTTTCTCCCGCGATGGTGAGCTGGCCACATCACACGCACGTGGCTAAGTCGACGGGGGCCTAGGCGTGGTTTAGGTGGTTGGGGTGTCACTAGGAAAGGACATGTTATGAGCTTGTATCACTTGTAGGTCACACCTGTGTGCGTGTGAAGCATTTGATCCTTGTTCATTTCGTGTGGGTAAAGTTGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCGTGTCCACGGTTATAGGACGATCGCTTGATGTGTTAGTCAGTCTATGTTAGCATCAAACTTGGGTTAAATGGCTGGTTTAGTCATGGATATGGTGATAGTTATGTTTGGAATCCATGGTTGGGCAACGGTAGCCCATGGATGGTGATGAGAGCACCGGTTGTGCTCATTTGTGATTCAATTTCAGATTTACTTGCTTGCTGTCCTAAATTTCGGATTATGCTATTTTGTACAAATGTTATATTTGCAACTTACTACTTGCTCAACAAAATTAGCTCTATGCAAAATCTGAACCACTTAGCCATTTCCTTTGATGTAGAAATTTGCATACTCCTTTGTACTATCATATATGGTGTAAGTCTTGCGGAGTACCTTTCGTACTCATGTTGCTATTTTCAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGT]

[+] EMBL AK105548             [TCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGCAAGCGTCTATGGATATTGAACCTATGATTTCACAAAACTTATTTGCTTGCAAAAACTATATATATGCATAAGTTGAATTGCCTTAAAATGTCGGTAACGGGTAGAGTTGTTTATATCCAAGTTCATGCATTTCCCTTCCTTTAATATATTGTTGCCATGTAACCTTGTCACCTTCAATTGTAAATGGTTAGGATGGTTTATTCTATCATCGAATGCTTAGCCATGCTTAGGTCTACTGTTGTTAGAAATCGATGGATGGAGCCATCGGATGAACTTATTCACCACCCGCGATTTATGGGCATTAAAATCTGATTACCTCACTCAATGATTAATATGGAAACATGCTTTAGCTTGGACGTGTGATAGGGCGATGACGGGATGGTCATTTTCCCTGATGCAAGTAGCCTTGTCTGGGTTGTTAAGGACCGAACATGTTGACGTCTATTCAAGCACCATACGTACTTCCACACACCTTATTTGGGACCGGCTTGTCTTAGTACTATGTTGCACTGTGCTCATCTACGTCTTGCTGGTCATTCGTGAGGGTGGTTTTCCCTTTGGATTGCCCCGGGTGTGCCTGATTTTGGCAGGGGGTTTCTCCCGCGATGGTGAGCTGGCCACATCACACGCACGTGGCTAAGTCGACGGGGGCCTAGGCGTGGTTTAGGTGGTTGGGGTGTCACTAGGAAAGGACATGTTATGAGCTTGTATCACTTGTAGGTCACACCTGTGTGCGTGTGAAGCATTTGATCCTTGTTCATTTCGTGTGGGTAAAGTTGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCGTGTCCACGGTTATAGGACGATCGCTTGATGTGTTAGTCAGTCTATGTTAGCATCAAACTTGGGTTAAATGGCTGGTTTAGTCATGGATATGGTGATAGTTATGTTTGGAATCCATGGTTGGGCAACGGTAGCCCATGGATGGTGATGAGAGCACCGGTTGTGCTCATTTGTGATTCAATTTCAGATTTACTTGCTTGCTGTCCTAAATTTCGGATTATGCTATTTTGTACAAATGTTATATTTGCAACTTACTACTTGCTCAACAAAATTAGCTCTATGCAAAATCTGAACCACTTAGCCATTTCCTTTGATGTAGAAATTTGCATACTCCTTTGTACTATCATATATGGTGTAAGTCTTGCGGAGTACCTTTCGTACTCATGTTGCTATTTTCAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGT]




>consensus_12299#0
TCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTC
TTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCT
TTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAG
AGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCG
GAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAA
GGCAAGCGTCTATGGATATTGAACCTATGATTTCACAAAACTTATTTGCTTGCAAAAACT
ATATATATGCATAAGTTGAATTGCCTTAAAATGTCGGTAACGGGTAGAGTTGTTTATATC
CAAGTTCATGCATTTCCCTTCCTTTAATATATTGTTGCCATGTAACCTTGTCACCTTCAA
TTGTAAATGGTTAGGATGGTTTATTCTATCATCGAATGCTTAGCCATGCTTAGGTCTACT
GTTGTTAGAAATCGATGGATGGAGCCATCGGATGAACTTATTCACCACCCGCGATTTATG
GGCATTAAAATCTGATTACCTCACTCAATGATTAATATGGAAACATGCTTTAGCTTGGAC
GTGTGATAGGGCGATGACGGGATGGTCATTTTCCCTGATGCAAGTAGCCTTGTCTGGGTT
GTTAAGGACCGAACATGTTGACGTCTATTCAAGCACCATACGTACTTCCACACACCTTAT
TTGGGACCGGCTTGTCTTAGTACTATGTTGCACTGTGCTCATCTACGTCTTGCTGGTCAT
TCGTGAGGGTGGTTTTCCCTTTGGATTGCCCCGGGTGTGCCTGATTTTGGCAGGGGGTTT
CTCCCGCGATGGTGAGCTGGCCACATCACACGCACGTGGCTAAGTCGACGGGGGCCTAGG
CGTGGTTTAGGTGGTTGGGGTGTCACTAGGAAAGGACATGTTATGAGCTTGTATCACTTG
TAGGTCACACCTGTGTGCGTGTGAAGCATTTGATCCTTGTTCATTTCGTGTGGGTAAAGT
TGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCGTGTCCACGGTTATAGGACGAT
CGCTTGATGTGTTAGTCAGTCTATGTTAGCATCAAACTTGGGTTAAATGGCTGGTTTAGT
CATGGATATGGTGATAGTTATGTTTGGAATCCATGGTTGGGCAACGGTAGCCCATGGATG
GTGATGAGAGCACCGGTTGTGCTCATTTGTGATTCAATTTCAGATTTACTTGCTTGCTGT
CCTAAATTTCGGATTATGCTATTTTGTACAAATGTTATATTTGCAACTTACTACTTGCTC
AACAAAATTAGCTCTATGCAAAATCTGAACCACTTAGCCATTTCCTTTGATGTAGAAATT
TGCATACTCCTTTGTACTATCATATATGGTGTAAGTCTTGCGGAGTACCTTTCGTACTCA
TGTTGCTATTTTCAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCA
AGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTG
GGGTTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTG
CTATATTTTGTGTTGTATGATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGT

consensusID : consensus_12299#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 600
fasta sequence

                              [TCCTCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGA-TTGGTTGCCCTTGT-G--GGG-TTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGAT-GGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATGCATTTGTGATGTTTATCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF328734             [TCCTCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGCTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCGAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGA TTGGTTGCCCTTGT GGNGGGTTTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGAT GGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATGCATTTGTGATGTTTATCAAAAA                              ]
[+] EMBL CF315763             [TCCTCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGA TTGGTTGCCCTTGTGG  GGG TTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGAT GGGCTTGTGAACCCCGTTATGAAAaaaaa                                                                                 ]
[-] EMBL CF331378             [                              GCTCTCTCCTAATGTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTNTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGA TTGGTTGCCCTTGT G  GGG TTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGAT GGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAaaaaa                                                       ]
[+] EMBL C27476               [                                               TCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCTGCATGTNACACCACTAGATCCTTGTNATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTNAAGTTCGNTCTTGCCCCGATTTGGTTCCCCTTGT G  GGG TTTTTGG ACACCACAGGTTTTTCTTTTGCTTATG GGAATTTTGAAA                                                                                                                                             ]
[-] EMBL CF315764             [                                                                          AGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTTTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGA TTGGTTGCCCTTGT G  GGG TTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGGCTTGTGAACCCCGTTATGAAAaaaaaa                                                                                ]
[-] EMBL CF328733             [                                                                                                                                TCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGCTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCGAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGA TTGGTTGCCCTTGT G  GGG TTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGAT GGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATGCATTTGTGATGTTTATCAAAAAA                             ]
[-] EMBL CF329149             [                                                                                                                                                                                                                           CTTTGTTTTCCTCCACTTGATTTGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTAATACTATCCCCCCAAGGGTGGCGAGGGTAGCGAGTAGTTTAAGTTTGCTTTTGCCCCGA TTGGTTGCCCTTGT G  GGG TTGTTGGCACACCACAGGTTTTTTTTTTGGTTATGAGAAATTATGAAACTTCCGCTGGTATATTTTGTGTTGTATGAA GGGGTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATTTAGATTTAAGCATTTGTGATGTTTATCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12299#1
TCCTCCCTTGTCTGTTCTCCCATGAGCTGAGCTCTCTCCTAATTTTCTCCTTCCCGAATC
TTCTTGAAAATGCAAGAATCAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAA
GCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAA
AAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGAT
TCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAG
CAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAG
GGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGC
ACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGT
GTTGTATGATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTA
GATTTATGCATTTGTGATGTTTATCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12299#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence

                              [GACTGGACTGAAGGAGTAGAAAGCAGTATCTCTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATGCATTTGTGATGTTTATCANANAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCGTTACGTACCGTAT]

[+] EMBL CF329150             [GACTGGACTGAAGGAGTAGAAAGCAGTATCTCTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACAGGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATGCATTTGTGATGTTTATCANANAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCGTTACGTACCGTAT]




>consensus_12299#2
GACTGGACTGAAGGAGTAGAAAGCAGTATCTCTTCGTTTTCCTCCACTTGATTCGGAGAA
TTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGA
GGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGA
GTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACA
GGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATG
ATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATG
CATTTGTGATGTTTATCANANAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAACCACTGTCATGCCGTTACGTACCGTAT

consensusID : consensus_12299#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence

                              [TGACTGGACTGAAGGAGTAGAAAACCCTTTTGCCGCCGTCACTCCCCTCTCGCCTTCCTTTCCCAACTAATACACCTAACTCCTCGCCGACGCCTCCGACTACGCCTCATCGAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGT]

[+] EMBL CF315564             [TGACTGGACTGAAGGAGTAGAAAACCCTTTTGCCGCCGTCACTCCCCTCTCGCCTTCCTTTCCCAACTAATACACCTAACTCCTCGCCGACGCCTCCGACTACGCCTCATCGAAGCCCTGCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCACATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAGTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAGACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTGCCCCGATTGGT]




>consensus_12299#3
TGACTGGACTGAAGGAGTAGAAAACCCTTTTGCCGCCGTCACTCCCCTCTCGCCTTCCTT
TCCCAACTAATACACCTAACTCCTCGCCGACGCCTCCGACTACGCCTCATCGAAGCCCTG
CATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCAC
ATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCAG
TAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAAG
ACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGATGCCGGCGTTGATGTTG
TGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTCGCTCTTG
CCCCGATTGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12299#0      -------------------------------TCCCTTGTCTGTTCTCCCATGAGCTGAGC 29
consensus_12299#3      TGACTGGACTGAAGGAGTAGAAAACCCTTTTGCCGCCGTCACTCCCCTCTCGCCTTCCTT 60
consensus_12299#1      ---------------------------------TCCTCCCTTGTCTGTTCTCCCATGAGC 27
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TCTCTCCTAAT-----TTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCT 84
consensus_12299#3      TCCCAACTAATACACCTAACTCCTCGCCGACGCCTCC-GACTACGCCTCATCGAAGCCCT 119
consensus_12299#1      TGAGCTCTCTCCTAATTTTCTCCTTCCCGAATCTTCTTGAAAATGCAAGAATCAAGCCCT 87
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCA 144
consensus_12299#3      GCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCA 179
consensus_12299#1      GCATGTCACACCACTAGATCCTTGTGATTCTAAGCTTTCCATCCATCCAAATGGCTTGCA 147
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      CATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCA 204
consensus_12299#3      CATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCA 239
consensus_12299#1      CATGCATAGATTTGTGAGGGAGATCGAGAAGAAAAGAGAAGGAGCTTGCTGCTTGGTGCA 207
consensus_12299#2      -----------------------------------------GACTGGACTGAAGGAGTAG 19
                                                                **     ***   *     

consensus_12299#0      GTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAA 264
consensus_12299#3      GTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAA 299
consensus_12299#1      GTAGCAGTAACACTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAA 267
consensus_12299#2      AAAGCAGTATCTCTTCGTTTTCCTCCACTTGATTCGGAGAATTTGGAATACGTGGAGCAA 79
                         ******* * ************************************************

consensus_12299#0      GACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGCAAGCGTCTATGGATATTGAAC 324
consensus_12299#3      GACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGA--TGCCGGCGTTGATG 357
consensus_12299#1      GACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGA--TGCCGGCGTTGATG 325
consensus_12299#2      GACTCAGAGGTTGAGTGTGTTTCCGCACAGCAGCAAGGTGAGGA--TGCCGGCGTTGATG 137
                       **************************************  **    *   *   ****  

consensus_12299#0      CTATGATTTCACAAAACTTATTTGCTTGCAAAAACTATATATATGCATAAGTTGAATTGC 384
consensus_12299#3      TTGTGCCCTACTA----CTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTC 413
consensus_12299#1      TTGTGCCCTACTA----CTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTC 381
consensus_12299#2      TTGTGCCCTACTA----CTATCCCACCAAGGGTGGCGAGGGTAGCGAGTAGTTGAAGTTC 193
                        * **   *   *     ***                    **   *  ******* * *

consensus_12299#0      CTTAAAATGTCGGTAACGGG---TAGAGTTGTTTATATCCAAGTTCATGCATTTCCCTTC 441
consensus_12299#3      GCTCTTGCCCCGATTGGT------------------------------------------ 431
consensus_12299#1      GCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACAGGTTTTTCTTTTG 441
consensus_12299#2      GCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACAGGTTTTTCTTTTG 253
                         *       ** *                                              

consensus_12299#0      CTT-TAATATATTGTTGCCATGTAACCTTGTCACCTTCAATTGTA-AATGGTTAGGATGG 499
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      CTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGCTTGTGAA 501
consensus_12299#2      CTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATGATGGGCTTGTGAA 313
                                                                                   

consensus_12299#0      TTTATTCTATCATCGAATGCTTAGCCATGCTTAGGTCTACTGTTGTTAGAAATCGATGGA 559
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      CCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATGCATTTGTGATGTT 561
consensus_12299#2      CCCCGTTATGAAATATGTACCTTGCTGTCCTTGTATCTAGATTTATGCATTTGTGATGTT 373
                                                                                   

consensus_12299#0      TGGAGCCATCGGATGAACTTATTCACCACCCGCGATTTATGGGCATTAAAATCTGATTAC 619
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      TATCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------- 600
consensus_12299#2      TATCANANAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCAT 433
                                                                                   

consensus_12299#0      CTCACTCAATGATTAATATGGAAACATGCTTTAGCTTGGACGTGTGATAGGGCGATGACG 679
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      GCCGTTACGTACCGTAT------------------------------------------- 450
                                                                                   

consensus_12299#0      GGATGGTCATTTTCCCTGATGCAAGTAGCCTTGTCTGGGTTGTTAAGGACCGAACATGTT 739
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GACGTCTATTCAAGCACCATACGTACTTCCACACACCTTATTTGGGACCGGCTTGTCTTA 799
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GTACTATGTTGCACTGTGCTCATCTACGTCTTGCTGGTCATTCGTGAGGGTGGTTTTCCC 859
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TTTGGATTGCCCCGGGTGTGCCTGATTTTGGCAGGGGGTTTCTCCCGCGATGGTGAGCTG 919
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GCCACATCACACGCACGTGGCTAAGTCGACGGGGGCCTAGGCGTGGTTTAGGTGGTTGGG 979
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GTGTCACTAGGAAAGGACATGTTATGAGCTTGTATCACTTGTAGGTCACACCTGTGTGCG 1039
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TGTGAAGCATTTGATCCTTGTTCATTTCGTGTGGGTAAAGTTGTACACCTCTGATCAGAG 1099
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TAAAACTATTCGAATAGCCGTGTCCACGGTTATAGGACGATCGCTTGATGTGTTAGTCAG 1159
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TCTATGTTAGCATCAAACTTGGGTTAAATGGCTGGTTTAGTCATGGATATGGTGATAGTT 1219
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      ATGTTTGGAATCCATGGTTGGGCAACGGTAGCCCATGGATGGTGATGAGAGCACCGGTTG 1279
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TGCTCATTTGTGATTCAATTTCAGATTTACTTGCTTGCTGTCCTAAATTTCGGATTATGC 1339
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TATTTTGTACAAATGTTATATTTGCAACTTACTACTTGCTCAACAAAATTAGCTCTATGC 1399
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      AAAATCTGAACCACTTAGCCATTTCCTTTGATGTAGAAATTTGCATACTCCTTTGTACTA 1459
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      TCATATATGGTGTAAGTCTTGCGGAGTACCTTTCGTACTCATGTTGCTATTTTCAGGTGA 1519
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GGATGCCGGCGTTGATGTTGTGCCCTACTACTATCCCACCAAGGGTGGCGAGGGTAGCGA 1579
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GTAGTTGAAGTTCGCTCTTGCCCCGATTGGTTGCCCTTGTGGGGTTGTTGGCACACCACA 1639
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      GGTTTTTCTTTTGCTTATGAGAAATTATGAAACTTCCGCTGCTATATTTTGTGTTGTATG 1699
consensus_12299#3      ------------------------------------------------------------
consensus_12299#1      ------------------------------------------------------------
consensus_12299#2      ------------------------------------------------------------
                                                                                   

consensus_12299#0      ATGGGCTTGTGAACCCCGTTATGAAATATGTACCTTGCTGT 1740
consensus_12299#3      -----------------------------------------
consensus_12299#1      -----------------------------------------
consensus_12299#2      -----------------------------------------