These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12303#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1510 fasta sequence [TAGGCCGTGCTCAGGCTTCATCATCATACACATCAAGTAGTATACTCAGATCACTGATGGCAGCACTAGAAGAAATAGAGCTACATGCACATAATGAGACAGTGAGGTCAAGCTATTCACACATGTATCTGTGCATATTGAGAGTACAACAGTTGTTTGATCTTATACCATTTTCAAGAACGATTGATAATGTTGGTCAAGATGAAGCAACTGCATGTACGCTTTTGAAGAATATGGCTTTGAATATATATGAACATGTTGGGGTGAGGATGCATCGCCTTTCTGTGTGTCAGTGGGAAGTGAAGTTATGGTTGGATTGTGATGGACAAGCAAGCGGTGCTTGGAGAGTAGTTGTTACCAATGTAACTGGCCACACCTGCACTGTCGATATTTACCGAGAAGTGGAGGATTCTAATACACATAAACTTTTCTACCACTCTGTTACACCATCACTGGGTCCTTTGCATGGCATTGTGTTGGATGAACCATACAAGCCATTGGATGCTATTGACCTCAAACGTTACTCTGCTAGGAAGAACGAAACTACGTACTGCTATGACTTCCCGCTGGCTTTTGAAACAGCACTGAAGAGGTCATGGAAATCAACCCTCTCTGTTGTTGCTGAAGCTAATGAGCATAATAAGAGCTATGCTAAAGTGACAGAGCTTATGTTTGCTGATTCAACTGGATCATGGGGTACTCCTTTGGTTCCAGTTGAGCGTTCTCCAGGTATCAATGATATTGGCATTGTCGCTTGGATCATGAAGCTCTCCACACCAGAATTTCCAAGTGGCCGGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTAGGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAGCAACTGCTGGTGCTAGGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACCTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGAACTGAAA-CTAGAAAGTGGAGAAACTAGATGGGTTGTTGATACCATTGTTGGAAAAGAGGATGGACTCGGTTGTGAGAACTTGCATGGAAGTGGTGCCATTGCCAGTGCCTATTCTAAAGCATACAAGGAGACCTTTACTCTGACATTCGTAACTGGACGAGCTGTTGGAATTGGTGCTTATCTTGCTCGGTTAAGCATGAGGTGTATACAGCGTCTTGATCAGCCAATTATTTTGACAGGATTTTCTGCGCTGAATAAGCTTCTGGGGCGGGAGGTATACAGCTCTCACATGCAACTAGGTGGCCCCAAAATCATGGCTACAAATGGTGTCGTCCATCTGACTGTGTCAGATGACCTTGAAGGTGTTTCTGCAATCTTGAAATGGCTCAGCTATGTTCCTCCTTATGTTGGTGGTCCTCTTCCTATCATGAA] [+] EMBL CB637772 [TAGGCCGTGCTCAGGCTTCATCATCATACACATCAAGTAGTATACTCAGATCACTGATGGCAGCACTAGAAGAAATAGAGCTACATGCACATAATGAGACAGTGAGGTCAAGCTATTCACACATGTATCTGTGCATATTGAGAGTACAACAGTTGTTTGATCTTATACCATTTTCAAGAACGATTGATAATGTTGGTCAAGATGAAGCAACTGCATGTACGCTTTTGAAGAATATGGCTTTGAATATATATGAACATGTTGGGGTGAGGATGCATCGCCTTTCTGTGTGTCAGTGGGAAGTGAAGTTATGGTTGGATTGTGATGGACAAGCAAGCGGTGCTTGGAGAGTAGTTGTTACCAATGTAACTGGCCACACCTGCACTGTCGATATTTACCGAGAAGTGGAGGATTCTAATACACATAAACTTTTCTACCACTCTGTTACACCATCACTGGGTCCTTTGCATGGCATTGTGTTGGATGAACCATACAAGCCATTGGATGCTATTGACCTCAAACGTTACTCTGCTAGGAAGAACGAAACTACGTACTGCTATGACTTCCCGCTGG ] [+] EMBL CB629532 [ TATACCCTTTTCAAGAACGATTGATAATGTTGGTCAAGATGAAGCAACTGCATGTACGCTTTTGAAGAATATGGCTTTGAATATATATGAACATGTTGGGGTGAGGATGCATCGCCTTTCTGTGTGTCAGTGGGAAGTGAAGTTATGGTTGGATTGTGATGGACAAGCAAGCGGTGCTTGGAGAGTAGTTGTTACCAATGTAACTGGCCACACCTGCACTGTCGATATTTACCGAGAAGTGGAGGATTCTAATACACATCAACTTTTCTACCACTCTGTTACACCATCACTGGGTCCTTTGCATGGCATTGCGTTGGATGAACCATACAAGCCATTGGATGCTATTGACCTCAAACGTTACTCTGCTAGGAAGAACGAAACTACGTACTGCTATGACTTCCCGCTGGCTTTTGAAACAGCACTGAAGAGGTCATGGAAATCAACCCTCTCTGTTGTTGCTGAAGCTAATGAGCATAATAAGAGCTATGCTAAAGTGACAGAGCTTATGTTTGCTGATTCAACTGGATCATGGGGTACTCCTTTGGTTCCAGTTGAGCGTTCTCCAGGTATCAATGATATTGGCATTGTCGCTTGGATCATGAAGCTCTCCACACCAGAATTTCCAAGTGGCCGGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTAGGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAGCAACTGCTGGTGCTAGGCTCGGTGTAGCTGAag ] [+] EMBL CB659853 [ TACACCATCACTGGGTCCTTTGCATGGCATTGTGTTGGATGAACCATACAAGCCATTGGATGCTATTGACCTCAAACGTTACTCTGCTAGGAAGAACGAAACTACGTACTGCTATGACTTCCCGCTGGCTTTTGAAACAGCACTGAAGAGGTCATGGAAATCAACCCTCTCTGTTGTTGCTGAAGCTAATGAGCATAATAAGAGCTATGCTAAAGTGACAGAGCTTATGTTTGCTGATTCAACTGGATCATGGGGTACTCCTTTGGTTCCAGTTGAGCGTTCTCCAGGTATCAATGATATTGGCATTGTCGCTTGGATCATGAAGCTCTCCACACCAGAATTTCCAAGTGGCCGGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTAGGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAGCAACTGCTGGTGCTAGGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACCTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGAACTGAAA CTAGAAAGTGGAGAAACTAGATGGGTTGTTGATACCATTGTTGGAAAAGAGGATGGACTCGGTTGTGAGAACTTGCATGGAAGTGGTGCCATTGCCAGTGCCTATTCTAAAGCATACAAGGAGACCTTTACTCTGACATTCGTAACTGGACGAGCTGTTGGAATTGGTGCTTATCTTGCTCGGTTAAGCATGAGGTGTATACA ] [+] EMBL BF430541 [ TTACTCTGCTAGGAAGAACGAAACTACGTACTGCTATGACTTCCCGCTGGCTTTTGAAACAGCACTGAAGAGGTCATGGAAATCAACCCTCTCTGTTGTTGCTGAAGCTAATGAGCATAATAAGAGCTATGCTAAAGTGACAGAGCTTATGTTTGCTGATTCAACTGGATCATGGGGTACTCCTTTGGTTCCAGTTGAGCGTTCTCCAGGTATCAATGATATTGGCATTGTCGCTTGGATCATGAAGCTCTCCACACCAGAATTTCCAAGTGGCCGGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTAGGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAGCAACTGCTGGTGCTAGGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACCTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGAACTGAAA CTAGAAAGTGGAGAAACTAGATGGGTTGGTGATACCATTGTTGGAAAAGAGGATGGACTCGGTTGTGAGAACTTGCATGGGAGTGGTGCCATTGCCAGTGCCTATT ] [+] EMBL CB637826 [ ACTTCCCGCTGGCTTTTGAAACAGCACTGAAGAGGTCATGGAAATCAACCCTCTCTGTTGTTGCTGAAGCTAATGAGCATAATAAGAGCTATGCTAAAGTGACAGAGCTTATGTTTGCTGATTCAACTGGATCATGGGGTACTCCTTTGGTTCCAGTTGAGCGTTCTCCAGGTATCAATGATATTGGCATTGTCGCTTGGATCATGAAGCTCTCCACACCAGAATTTCCAAGTGGCCGGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTAAGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAACAACTGCTGGTGCTAAGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACCTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGAACTGAAA CTAGAAAGTGGAGAAACTAGATGGGTTGTTGATACCATTGTTGGAAAAGAGGATGGACTCGGTTGTGAGAACTTGCA ] [+] EMBL CB637861 [ TATGCTAAAGTGACAGACCTTATGTTTGCTGATTCAACTGGATCATGGGGTACTCCTTTGGTTCCAGTTGAGCGTTCTCCACGTATCAATGATATTGGCATTGTCGCTTGGATCATGAAGCTCTCCACACCAGAATTTCCAAGTGGCCGGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTATGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCACCAACTGCTGGTGCTAGGCTCAGTGTCGCTGAGGAAATATAAGCATGCTTGAATGTTGGTTGGTCTGATGACGACAG ] [+] EMBL CB646502 [ CCAGAATTTCCAAGTGGCCGGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTAGGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAGCAACTGCTGGTGCTAGGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACCTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGAACTGAAA CTAGAAAGTGGAGAAACTAGATGGGTTGTTGATACCATTGTTGGAAAAGAGGATGGACTCGGTTGTGAGAACTTGCATGGAAGTGGTGCCATTGCCAGTGCCTATTCTAAAGCATACAAGGAGACCTTTACTCTGACATTCGTAACTGGACGAGCTGTTGGAATTGGTGCTTATCTTGCTCGGTTAGGCATGAGGTGTATACAGCGTCTTGATCAGCCAATTATTTTGACAGGATTTTCTGCGCTGAATAAGCTTCTGGGGCGGGAGGTATACAGCTCTCACATGCAACTAGGTGGCCCCAAAATCATGGCTACAAATGGTGTCGTCCATCTGACTGTGTCAGATGACCTTGAAGGTGTTTCTGCAATCTTGAAATGGCTCAGCTATGTTCCTCCTTATGTTGGTGGTCCTCTTCCTATCATGAA] [+] EMBL OSS10652A [ GGGAGATTATTGTTGTTTCAAATGATGTGACATTTAAAGCTGGATCATTTGGTCCTAGGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAGCAACTNCTGGTGCTAGGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACNTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGNACTGAAACCTAGAAAGTGGAGAAAC ] [+] EMBL CB641371 [ TTTAAAGCTGGATCATTTGGTCCTAGGGAAGATGCTTTCTTTGATGCGGTCACCAATCTTGCTTGTGAGAGGAAACTTCCTCTTATCTACTTGTCAGCAACTGCTGGTGCTAGGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACCTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGAACTGAAA CTAGAAAGTGGAGAAACTAGATGGGTTGTTGATACCATTGTTGGAAAAGAGGATGGACTCGGTTGTGAGAACTTGCATGGAAGTGGTGCCATTGCCAGTGCCTATTCTAAAGCATACAAGGAGACCTTTACTCTGACATTCGTAACTGGACGAGCTGTTGGAATTGGTGCTTATCTTGCTCGGTTAGGCATGAGGTGTATACAGCGTCTTGATCAGCCAATTATTTTGACAGGATTTTCTGCGCTGAATAAGCTTCTGGGGCGGGAGGTATACAGCTCTCACATGCAACTAGGTGGCCCCAAAATCATGGCTACAAATGGTGTCGTCCATCTGACTGTGTCA ] [+] EMBL CB640471 [ AAACTTCCTCTTATCTACTTGTCAGCAACTGCTGGTGCTAGGCTCGGTGTAGCTGAGGAAATAAAAGCATGCTTCAATGTTGGTTGGTCTGATGACGAGAGCCCTGAACGTGGTTTTCATTACATTTACCTCACTGAACAAGATTATTCGCGCCTGAGTTCTTCGGTTATAGCCCATGAACTGAAA CTAGAAAGTGGAGAAACTAGATGGGTTGTTGATACCATTGTTGGAAAAGAGGATGGACTCGGTTGTGAGAACTTGCATGGAAGTGGTGCCATTGCCAGTGCCTATTCTAAAGCATACAAGGAGACCTTTACTCTGACATTCGTAACTGGACGAGCTGTTGGAATTGGTGCTTATCTTGCTCGGTTAAGCATGAGGTGTATAC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||