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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12307#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1583 fasta sequence
[CAGCGAAATCACAGGACTAGAATACTTGCTGACTACTGAGGCGAAAGGATACCGGGTGGCGAAGATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAGGAGCCAATGCTCCAGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCAAGTTCTTCCCCAGGAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCGACGATCCTGCAACAAGGGCAAAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACACTGTCATGTCAAAGGAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAACACTGACGCCACGGCTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCAGCCCGTGCCGCCCTTGGTGAATGGGGGCGTCCAGCAGCTGACATCACCCACCTTGTCTACATCTCGTCCAGTGAGCTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCTCCATCCAAACACCGTCCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGCGCTGCCGCGCTCCGCACCGCCAAGGACATTGCTGAGAACAACCCAGGGAGCCGCGTCCTTGTAGTAGCCGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCA-TTG-CTG-CTGA-GGAGAGT-CCCTTCCTAGAGCTTCAG-TTCTCAA-CACAGGAGTT-CCTACCAGGGACGGA-CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT-CAAACTGGGGCGTGATTTG-CCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT-GGGCTGTGCATCCTGGTGGTCCAGCAATAC-TGAACAGGC-TAGAGG-TTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATAGTTATTGTTTTACTGTAATCTATGTTTTATGTATCAAACAATGTGAGGTACTCTAGTTTGAATGCAAGATACTTGAAAAAATATCAGGCAATACATTGCATCCTGTTACATTGTCAAAAAAAAAAATTTTCCAGAGTATCTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK105510 [CAGCGAAATCACAGGACTAGAATACTTGCTGACTACTGAGGCGAAAGGATACCGGGTGGCGAAGATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAGGAGCCAATGCTCCAGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCAAGTTCTTCCCCAGGAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCGACGATCCTGCAACAAGGGCAAAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACACTGTCATGTCAAAGGAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAACACTGACGCCACGGCTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCAGCCCGTGCCGCCCTTGGTGAATGGGGGCGTCCAGCAGCTGACATCACCCACCTTGTCTACATCTCGTCCAGTGAGCTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCTCCATCCAAACACCGTCCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGCGCTGCCGCGCTCCGCACCGCCAAGGACATTGCTGAGAACAACCCAGGGAGCCGCGTCCTTGTAGTAGCCGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCA TTG CTG CTGA GGAGAGT CCCTTCCTAGAGCTTCAG TTCTCAA CACAGGAGTT CCTACCAGGGACGGA CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT CAAACTGGGGCGTGATTTG CCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT GGGCTGTGCATCCTGGTGGTCCAGCAATAC TGAACAGGC TAGAGG TTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATAGTTATTGTTTTACTGTAATCTATGTTTTATGTATCAAACAATGTGAGGTACTCTAGTTTGAATGC ]
[+] EMBL BP184631 [ CAGGACTAGAATACTTGCTGACTACTGAGGCGAAAGGATACCGGGTGGCGAAGATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAGGAGCCAATGCTCCAGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCAAGTTCTTCCCCAGGAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCGACGATCCTGCAACAAGGGCAAAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACACTGTCATGTCAAAGGAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAACACTGACGCCACGGCTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCA CCCGTGCCG CCTTGGTGAATGGGGGCGTCCAGCAGCTGACATCACCCACCTTGTCTACATCTCGTCCAGTGAGCTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCTCCATCCAA ]
[+] EMBL AB110182 [ CAGGACTAGAATACTTGCTGACTACTGAGGCGAAAGGATACCGGGTGGCGAAGATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAGGAGCCAATGCTCCAGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCAAGTTCTTCCCCAGGAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCGACGATCCTGCAACAAGGGCAAAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACACTGTCATGTCAAAGGAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAACACTGACGCCACGGCTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCAGCCCGTGCCGCCCTTGGTGAATGGGGGCGTCCAGCAGCTGACATCACCCACCTTGTCTACATCTCGTCCAGTGAGCTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCTCCATCCAAACACCGTCCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGCGCTGCCGCGCTCCGCACCGCCAAGGACATTGCTGAGAACAACCCAGGGAGCCGCGTCCTTGTAGTAGCCGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCA TTG CTG CTGA GGAGAGT CCCTTCCTAGAGCTTCAG TTCTCAA CACAGGAGTT CCTACCAGGGACGGA CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT CAAACTGGGGCGTGATTTG CCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT GGGCTGTGCATCCTGGTGGTCCAGCAATAC TGAACAGGC TAGAGG TTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATAGTTATTGTTTTACTGTAATCTATGT ]
[+] EMBL OSCHSLKGN [ ATACTTGCTGACTACTGAGGCGAAAGGATACCGGGTGGCGAAGATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAGGAGCCAATGCTCCAGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCAAGTTCTTCCCCAGGAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCAACGATCCTGCAACAAGGGCAAAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACACTGTCATGTCAAAGGAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAACACTGACGCCACGGCTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCAGCCCGTGCCGCCCTTGGTGAATGGGGGCGTCCAGCAGTTGACATTACCCACCTTGTCTACATCTCGTCCAGTGAGCTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCTCCATCCAAACACCGTCCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGCGCTGCCGCGTTCCGCACCGCCAAGGACATTGCTGAGAACAACCCAGGGAGCCGCGTCCTTGTAGTAGCCGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCA TTG CTG CTGA GGAGAGT CCCTTCCTAGAGCTTCAG TTCTCAA CACAGGAGTT CCTACCAGGGACGGA CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT CAAACTGGGGCGTGATTTG CCCGAAAAGATTGAAAGCCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT GGGCTGTGCATCCTGGTGGTCCAGCAATAC TGAACAGGC TAGAGG TTTGCTTTGAACTCCAGCGAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTACGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTAAGGGCTGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAA GGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGACCTTG AACATCTCATTAGGAGCATAGTTGTCTTTACAGCATCTGTGCACTCCATAGTTATTGTTTTACTGTAATCTCTG TTTATGTTTCAAACAATGTGAGGTACCCTAGTTTGAATGCCAGATACTTGGGAAAATTTCGGGCAATACATTGCATCCTGTTACATTGTCATGTATAGTAATTTTCCAGAGTATCTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL D50576 [ ATACCGGGTGGCGAAGATGGCTGACCTTGGATTCGGCGATGCCAGGAGTGGCAATGGCAGCAGGAGCCAATGCTCCAGGGGGAAGGCGATGCTGCTCGCCCTCGGCAAGGGCCTCCCTGAGCAAGTTCTTCCCCAGGAGAAGGTCGTCGAGACCTACCTCCAGGACACCATCTGCGACGATCCTGCAACAAGGGCAAAGCTGGAAAGACTTTGCAAGACCACCACAGTGAGGACAAGGTACACTGTCATGTCAAAGGAGCTCCTAGACGAGCACCCAGAGCTCAGGACTGAGGGAACTCCAACACTGACGCCACGGCTTGACATCTGCAATGCTGCAGTGCTTGAGCTTGGTGCTACTGCAGCCCGTGCCGCCCTTGGTGAATGGGGGCGTCCAGCAGCTGACATCACCCACCTTGTCTACATCTCGTCCAGTGAGCTTCGCCTCCCAGGGGGTGACCTTTTCCTGGCAACTCGCCTTGGCCTCCATCCAAACACCGTCCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGCGCTGCCGCGCTCCGCACCGCCAAGGACATTGCTGAGAACAACCCAGGGAGCCGCGTCCTTGTAGTAGCCGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCA TTG CTG CTGA GGAGAGT CCCTTCCTAGAGCTTCAG TTCTCAA CACAGGAGTT CCTACCAGGGACGGA CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT CAAACTGGGGCGTGATTTG CCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT GGGCTGTGCATCCTGGTGGTCCAGCAATAC TGAACAGGC TAGAGG TTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATAGTTATTGTTTTACTGTAATCTATGTTTTATGTATCAAACAATGTGAGGTACTCTA ]
[+] EMBL AU162247 [ TCCTTGTAGTAGCCGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCA TTG CTG CTGA GGAGAGT CCCTTCCTAGAGCTTCAG TTCTCAA CACAGGAGTT CCTACCAGGGACGGA CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT CAAACTGGGGCGTGATTTG CCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT GGGCTGTGCATCCTGGTGGTCCAGCAATAC TGAACAGGC TAGAGG TTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAGAA ]
[+] EMBL AU164145 [ TCCTTGTAGTAGCCGCGGAGACGACGGTGCTGGGATTCCGGCCACCAAGTCCTGACCGTCCTTACGATCTTGTTGGTGCTGCCCTGTTTGGTGACGGCGCATCAGCTGCGATCATTGGAGCAGGCCCCA TTG CTG CTGA GGAGAGT CCCTTCCTAGAGCTTCAG TTCTCAA CACAGGAGTT CCTACCAGGGACGGA CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT CAAACTGGGGCGTGATTTG CCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCTGGGGCTGTGCATCCTGGTGGTCCAGCAATACTTGANCAGGCTTAGAGGTTTTGCCTTGAACc ]
[+] EMBL BP184632 [ CCA TTG CTG CTGA GGAGAGT CCCTTCCTAGAGCTTCAG TTCTCAA CACAGGAGTT CCTACCAGGGACGGA CAAGGTAATTGATGGCAAGATCACTGAGGAAGGGATTAATTT CAAACTGGGGCGTGATTTG CCCGAAAAGATTGAAAACCGTATAGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT GGGCTGTGCATCCTGGTGGTCCAGCAATAC TGAACAGGC TAGAGG TTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATAGTTATTGTTTTACTGTAATCTATGTTTTATGTATCAAAAAA ]
[+] EMBL C99729 [ CCATTTGCCTGCCTGAGGGAGANTCCCCTCCCTAGGGCTTCAGTTTCTCAACCCCNGGAGTTCCCTACCAGGGACGGACCAAGGTNATTGATGGCAAGATCACTGAGGAAGGGATTAATTTCCAAACTGGGGCGTGATTTGCCCCGAAAAGATTGAAAACCGTATNGAAGGGTTCTGCAGGACACTCATGGATCGGGTTGGGATAAAGGAGTTCAATGATGTATTCT GGGCTGTGCATCCTGGTGGTCCAGCAATAC TGAACAGGC TAGAGG TTTGCCTTGAACTCCAGCCAGAGAAGCTCAAGATCAGTAGAAAGGCCCTGATGAACTATGGTAATGTGAGCAGCAACACCGTCTTCTATGTGTTGGAGTATTTGAGGGATGAGTTGAAGAAAGGGATGATAAGGGAAGAATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCACATTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATAGTTATTGTTTTACTGTAATCTATGTTTTATGTATCAAACAATGTGAGGTACTCTAGTTTGAATGCAAGATACTTGAAAAAATATCAGGCAATACATTGCATCCTGTTACATTGTCAAAAAAAAA ]
[+] EMBL C99520 [ gaanATGGGGACTGATCTTGGCTTTTGGCCCAGGCATCAC TTTGAAGGAATGCTAGTTCGAGGCATTAACTGAGACTGAAAGGGGTCCAAGAAGACTTTCAGCTAGATGGAAGAATCACAAACATACCATTTCCAGGTTAAGTATATAGTATGAACTTGAAACATCTCATAAGGAGCATAGATGTCTTGACAGCATCTGTGCACTACATAGTTATTGTTTTACTGTAATCTATGTTTTATGTATCAAACAATGTGAGGTACTCTAGTTTGAATGCAAGATACTTGAAAAAATATCAGGCAATACATTGCATCCTGTTACATTGTCAAAAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||