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Oryza sativa
cluster # 12324 cluster # 12324       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12324#0 length = 1933 sequences # 1  
consensus_12324#1 length = 1667 sequences # 4  
consensus_12324#2 length = 1591 sequences # 4  
consensus_12324#3 length = 631 sequences # 1  

consensusID : consensus_12324#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1933
fasta sequence
                              [CACTTGTTCAGGGAAGTGTACAGGTTAGATTCTAAAAGTTTTCAACAATTTGCACAGGGATTTCTTCTTCAGCTGCACCGCGAAGAAACATGGATAAGCTCGATGGCTCTGCCCGTCTTATGATAGTTTCCGATCTTGACCAGACAATGATTGATCACAATGATCCGAAGAACTTGTCCTTGCTTAGGTTCCAGGCGCTATGGGAGTCCGAGTTCTCCCAAGATTCTCTACTGGTCTTCTCGACTGGAAGATCACCTATCAGTTACAGGGGTTTGAGAACACAGAAGCCTTTGATCACTCCAGACATCACTATCATGTCTGTGGGCACTGTGATAGCATATGGTGAAGAGATGATTCATGATGTTGGCTGGGCTGAATTCCTTAGCAACAAATGGGATAGGGATATCGTTGTCGAGGAGACAGCTAAGTTCCCTAAGCTGAAGCCTCAGCCAGAGAGGAGTCAGGGTCCTCATAAGGTTAGCTTTTTTGTCGACAAGGAGGGTGCTCGGGAAGTTATGGATTCTCTCCCTGAGACGTTAAATCGGCGTGGGCTAGATGTTAAAATAATCTTCAGTAGTGGTGAGGCCCTTGATGTATTACCACAAGGTGCAGGAAAAGGCCAGGCTCTTCTATATTTGCTGAAAAAGTTCAATTCAGATGGGAAACCACCAAACAGTACTCTTGTTTGTGGTGACTCTGGCAATGATGCAGAATTATTCAGTGTCCCATCTGTTCATGGTGTCATGGTCAGCAATGCCCAAGAGGAGCTGCTTCAGTGGTATGAAGAAAATGCCAGGGGCAATCCTATGATGATTCATGCAACCGAGAGGTGTGCTGCTGGCATCATGCAAGCTATTGGACACTTCAATTTAGGACCTAACGTTTCCCCAAGAGATCTTGAATTCCCTTACCCGAAGTTAGACGCCATCAAACCTGCAGATGTTGTGGTGAAGTTTTATGTTCTCTATGAAAAATGGCGGCAGGGTGAGGTTCAAAAGGCCCCATTCATTATCCAGTATTTGAAAAGGATTACTGTAAGTACATTCCTCAGCTACATTCTTAGAATAACTCAGTCTAGCTTTGTTCATAAACCCCTCTTTTTGAAATCAATCATACCTTTTGTCGACTGCTATAGTTAGGTTATGAAAAGAGGTAACTATATAATTTGTGTCAGCATGTTATCTATAATTTTGCAAAAGTAATTTCAGACCATATGATACCACTTGTCTCTTGTCTGGCGAAATGTACATATTTATGATTCTTTTTTTTTGGCGAGGATATTACTGGTTCATATTGGCTTCCTTGAGCAACATTTAAACCGATCTTCTTCTTCTTCTTTTATGTGTGTTAGCATCCTAATGGAACAACTATTCATCCTTCTGGAAGGGAGTGTTCACTTCATGCATCCATTGATGCACTGAGTTCATGTTATGCTGATAAACAAGGCAAGAAGTTCCGAGTATGGGTGGATAGAATTGTCGCTTCATCAATCGGTACAATTAATTGGCTGGTGAGGTTTGACAAGTGGGAAATGGAAGGCAATGTTCGGTATTGCTGCCTCACAACTCTTCTGCTGACTATGAAGCCTGAGACTGAAGATGGCTTCGAGATTACACACATCCACAAGACCTGGCTTGAAGGATACTCTGCAGGAAATGAGCATGCATGCATCCTGTAGGCCATTTAAATACAGGCAACTTACACAGAAACATGAGGAAATTTTCATCAGGAGTCAAGATAGAATAACAAGTGTACTCACTGTTGCGTGGATTTGATCCCAAATACTCGTAGTGTTATACTGGGGTACTCACAAATGGATTGATGCTCTTGCTGATTCATGTACAGTTCATGAAATTAAGCAAATAAACTCACTGTACCAGAAATTTTCTCGATGTACATGGATCTTGATACTTTCTTAAAGCTCATTTTAAGG]

[+] EMBL AK064563             [CACTTGTTCAGGGAAGTGTACAGGTTAGATTCTAAAAGTTTTCAACAATTTGCACAGGGATTTCTTCTTCAGCTGCACCGCGAAGAAACATGGATAAGCTCGATGGCTCTGCCCGTCTTATGATAGTTTCCGATCTTGACCAGACAATGATTGATCACAATGATCCGAAGAACTTGTCCTTGCTTAGGTTCCAGGCGCTATGGGAGTCCGAGTTCTCCCAAGATTCTCTACTGGTCTTCTCGACTGGAAGATCACCTATCAGTTACAGGGGTTTGAGAACACAGAAGCCTTTGATCACTCCAGACATCACTATCATGTCTGTGGGCACTGTGATAGCATATGGTGAAGAGATGATTCATGATGTTGGCTGGGCTGAATTCCTTAGCAACAAATGGGATAGGGATATCGTTGTCGAGGAGACAGCTAAGTTCCCTAAGCTGAAGCCTCAGCCAGAGAGGAGTCAGGGTCCTCATAAGGTTAGCTTTTTTGTCGACAAGGAGGGTGCTCGGGAAGTTATGGATTCTCTCCCTGAGACGTTAAATCGGCGTGGGCTAGATGTTAAAATAATCTTCAGTAGTGGTGAGGCCCTTGATGTATTACCACAAGGTGCAGGAAAAGGCCAGGCTCTTCTATATTTGCTGAAAAAGTTCAATTCAGATGGGAAACCACCAAACAGTACTCTTGTTTGTGGTGACTCTGGCAATGATGCAGAATTATTCAGTGTCCCATCTGTTCATGGTGTCATGGTCAGCAATGCCCAAGAGGAGCTGCTTCAGTGGTATGAAGAAAATGCCAGGGGCAATCCTATGATGATTCATGCAACCGAGAGGTGTGCTGCTGGCATCATGCAAGCTATTGGACACTTCAATTTAGGACCTAACGTTTCCCCAAGAGATCTTGAATTCCCTTACCCGAAGTTAGACGCCATCAAACCTGCAGATGTTGTGGTGAAGTTTTATGTTCTCTATGAAAAATGGCGGCAGGGTGAGGTTCAAAAGGCCCCATTCATTATCCAGTATTTGAAAAGGATTACTGTAAGTACATTCCTCAGCTACATTCTTAGAATAACTCAGTCTAGCTTTGTTCATAAACCCCTCTTTTTGAAATCAATCATACCTTTTGTCGACTGCTATAGTTAGGTTATGAAAAGAGGTAACTATATAATTTGTGTCAGCATGTTATCTATAATTTTGCAAAAGTAATTTCAGACCATATGATACCACTTGTCTCTTGTCTGGCGAAATGTACATATTTATGATTCTTTTTTTTTGGCGAGGATATTACTGGTTCATATTGGCTTCCTTGAGCAACATTTAAACCGATCTTCTTCTTCTTCTTTTATGTGTGTTAGCATCCTAATGGAACAACTATTCATCCTTCTGGAAGGGAGTGTTCACTTCATGCATCCATTGATGCACTGAGTTCATGTTATGCTGATAAACAAGGCAAGAAGTTCCGAGTATGGGTGGATAGAATTGTCGCTTCATCAATCGGTACAATTAATTGGCTGGTGAGGTTTGACAAGTGGGAAATGGAAGGCAATGTTCGGTATTGCTGCCTCACAACTCTTCTGCTGACTATGAAGCCTGAGACTGAAGATGGCTTCGAGATTACACACATCCACAAGACCTGGCTTGAAGGATACTCTGCAGGAAATGAGCATGCATGCATCCTGTAGGCCATTTAAATACAGGCAACTTACACAGAAACATGAGGAAATTTTCATCAGGAGTCAAGATAGAATAACAAGTGTACTCACTGTTGCGTGGATTTGATCCCAAATACTCGTAGTGTTATACTGGGGTACTCACAAATGGATTGATGCTCTTGCTGATTCATGTACAGTTCATGAAATTAAGCAAATAAACTCACTGTACCAGAAATTTTCTCGATGTACATGGATCTTGATACTTTCTTAAAGCTCATTTTAAGG]


>consensus_12324#0 CACTTGTTCAGGGAAGTGTACAGGTTAGATTCTAAAAGTTTTCAACAATTTGCACAGGGA TTTCTTCTTCAGCTGCACCGCGAAGAAACATGGATAAGCTCGATGGCTCTGCCCGTCTTA TGATAGTTTCCGATCTTGACCAGACAATGATTGATCACAATGATCCGAAGAACTTGTCCT TGCTTAGGTTCCAGGCGCTATGGGAGTCCGAGTTCTCCCAAGATTCTCTACTGGTCTTCT CGACTGGAAGATCACCTATCAGTTACAGGGGTTTGAGAACACAGAAGCCTTTGATCACTC CAGACATCACTATCATGTCTGTGGGCACTGTGATAGCATATGGTGAAGAGATGATTCATG ATGTTGGCTGGGCTGAATTCCTTAGCAACAAATGGGATAGGGATATCGTTGTCGAGGAGA CAGCTAAGTTCCCTAAGCTGAAGCCTCAGCCAGAGAGGAGTCAGGGTCCTCATAAGGTTA GCTTTTTTGTCGACAAGGAGGGTGCTCGGGAAGTTATGGATTCTCTCCCTGAGACGTTAA ATCGGCGTGGGCTAGATGTTAAAATAATCTTCAGTAGTGGTGAGGCCCTTGATGTATTAC CACAAGGTGCAGGAAAAGGCCAGGCTCTTCTATATTTGCTGAAAAAGTTCAATTCAGATG GGAAACCACCAAACAGTACTCTTGTTTGTGGTGACTCTGGCAATGATGCAGAATTATTCA GTGTCCCATCTGTTCATGGTGTCATGGTCAGCAATGCCCAAGAGGAGCTGCTTCAGTGGT ATGAAGAAAATGCCAGGGGCAATCCTATGATGATTCATGCAACCGAGAGGTGTGCTGCTG GCATCATGCAAGCTATTGGACACTTCAATTTAGGACCTAACGTTTCCCCAAGAGATCTTG AATTCCCTTACCCGAAGTTAGACGCCATCAAACCTGCAGATGTTGTGGTGAAGTTTTATG TTCTCTATGAAAAATGGCGGCAGGGTGAGGTTCAAAAGGCCCCATTCATTATCCAGTATT TGAAAAGGATTACTGTAAGTACATTCCTCAGCTACATTCTTAGAATAACTCAGTCTAGCT TTGTTCATAAACCCCTCTTTTTGAAATCAATCATACCTTTTGTCGACTGCTATAGTTAGG TTATGAAAAGAGGTAACTATATAATTTGTGTCAGCATGTTATCTATAATTTTGCAAAAGT AATTTCAGACCATATGATACCACTTGTCTCTTGTCTGGCGAAATGTACATATTTATGATT CTTTTTTTTTGGCGAGGATATTACTGGTTCATATTGGCTTCCTTGAGCAACATTTAAACC GATCTTCTTCTTCTTCTTTTATGTGTGTTAGCATCCTAATGGAACAACTATTCATCCTTC TGGAAGGGAGTGTTCACTTCATGCATCCATTGATGCACTGAGTTCATGTTATGCTGATAA ACAAGGCAAGAAGTTCCGAGTATGGGTGGATAGAATTGTCGCTTCATCAATCGGTACAAT TAATTGGCTGGTGAGGTTTGACAAGTGGGAAATGGAAGGCAATGTTCGGTATTGCTGCCT CACAACTCTTCTGCTGACTATGAAGCCTGAGACTGAAGATGGCTTCGAGATTACACACAT CCACAAGACCTGGCTTGAAGGATACTCTGCAGGAAATGAGCATGCATGCATCCTGTAGGC CATTTAAATACAGGCAACTTACACAGAAACATGAGGAAATTTTCATCAGGAGTCAAGATA GAATAACAAGTGTACTCACTGTTGCGTGGATTTGATCCCAAATACTCGTAGTGTTATACT GGGGTACTCACAAATGGATTGATGCTCTTGCTGATTCATGTACAGTTCATGAAATTAAGC AAATAAACTCACTGTACCAGAAATTTTCTCGATGTACATGGATCTTGATACTTTCTTAAA GCTCATTTTAAGG



consensusID : consensus_12324#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1667
fasta sequence
                              [CGCACACACCTCTCCCTCTCCCTCCTCCCCCGCGCGCCCCGCGGCCTCCGCCACCCGCGCCCTCGCCGTCGCCGCCCCGTCCCGTGCCTCCTGCTCCCTCCGCCGCCGCGCGCGCGGCGCGTCGCAGGCTGGTAAAATGGATAAGCTCAATGGTTCTGCGCGTCTCATGATTGTTTCAGATCTTGACCATACAATGGTTGATCATCATGACGAGGAGAACCTGTCATTGCTTAGATTTGGTGCCCTGTGGGAGTCTGTTTACTGCCAGGATTCTTTACTTGTATTTTCGACTGGAAGATCACCTACCCTGTATATGGAATTGAGGAAAGAGAAACCTATGCTAACTCCAGACATCACTATCATGTCTGTGGGCACTGAGATAACATATGGTGAGGAAATGGTTCCTGATGATGGCTGGGTGGAATATCTGAATAATAAGTGGGACAGGAATATTGTTGTTGAGGAGACAGCAAATGTTTCCGAGCTGAAACTTCAGGTAGAGTCGGAACAGCGTCCACATAAGGTCAGCTTCTATGTTGACAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCTGAGAAGTTGGAGAAACGTGGGCTAGATGTTAAAATAATCTATAGCGGTGGCCAGGACCTTGATGTATTACCTCAAGGTGCTGGAAAGGGTCAGGCACTTGCATATTTGCTCAAGAAGTTAAGCTCATGTGGAAAACCACCCAATAATACTCTTGCTTGCGGTGACTCTGGCAACGATGCAGAATTATTCAGCATCCCTGGTGTACATGGTGTCATGGTCAGCAATGCCCAAGAGGAACTACTTCAGTGGTATTCAGAAAATGCGAAGGATAATCCTAAGATAATTCATGCAACTGAGAGGTGTGCTGCTGGAATCATACAAGCCATTGGACACTTCAAACTAGGACCTAATGTTTCTCCCCGAGACGTGGATTTCCCTTATGTCAAGGAGAACCCGGTAAAGCCTACGGATGCTGTTGTAAAGTTTTATGTTCTCTACGAGAAGTGGCGTAGGGCTGAGGTTCCAAAGTCTGATTCGGTTACACAGTATTTCAAAAATATAACTCATGCAAATGGAGTTATTATTCATCCTGCTGGGCTTGAGTGTTCTCTTCATGCATCAATTGATGCATTGGGGTCATGTTACGGTGACAAACAAGGGAAGAAATACAGAGCATGGGTGGACAGACTGGTTGTCTCACAATGTGGTTCAGAGGGTTGGCTGGTGAGATTTAACTTGTGGGAGTTGGAAGGTGATGTGTGGTCGTGTTGTCTGACAAGTCTTGCACTGAATGCGAAGCCTGAAACCCCCGAGGGCTTCGTGGTAACACACATCCACAAAACATGGCTCAAAGGGTACTCATCAGCGGATGAGCAATCGTCCAAGCTTTAGAACCTTTTCTGCACCTCCGTGTGCACATGGAAGGAATTTACTCGAGGATAAATAATGAATCTTCTCTTGAGATTACTTCCTTTTCTTGTCTATATTGTCAATTTTGTTCAAAATACTATGCTGGAGGATTCCCAGAGCCCCAAATTAAGTTTGACACATCCTTGTTTGATGTGTAAGATAAATCATAAATGTTACTGTATATCTCATGATTATCATGAGCGCATAAAGCAAAACTACTTCACTTGAATATATGTTACTA]

[+] EMBL AK063330             [CGCACACACCTCTCCCTCTCCCTCCTCCCCCGCGCGCCCCGCGGCCTCCGCCACCCGCGCCCTCGCCGTCGCCGCCCCGTCCCGTGCCTCCTGCTCCCTCCGCCGCCGCGCGCGCGGCGCGTCGCAGGCTGGTAAAATGGATAAGCTCAATGGTTCTGCGCGTCTCATGATTGTTTCAGATCTTGACCATACAATGGTTGATCATCATGACGAGGAGAACCTGTCATTGCTTAGATTTGGTGCCCTGTGGGAGTCTGTTTACTGCCAGGATTCTTTACTTGTATTTTCGACTGGAAGATCACCTACCCTGTATATGGAATTGAGGAAAGAGAAACCTATGCTAACTCCAGACATCACTATCATGTCTGTGGGCACTGAGATAACATATGGTGAGGAAATGGTTCCTGATGATGGCTGGGTGGAATATCTGAATAATAAGTGGGACAGGAATATTGTTGTTGAGGAGACAGCAAATGTTTCCGAGCTGAAACTTCAGGTAGAGTCGGAACAGCGTCCACATAAGGTCAGCTTCTATGTTGACAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCTGAGAAGTTGGAGAAACGTGGGCTAGATGTTAAAATAATCTATAGCGGTGGCCAGGACCTTGATGTATTACCTCAAGGTGCTGGAAAGGGTCAGGCACTTGCATATTTGCTCAAGAAGTTAAGCTCATGTGGAAAACCACCCAATAATACTCTTGCTTGCGGTGACTCTGGCAACGATGCAGAATTATTCAGCATCCCTGGTGTACATGGTGTCATGGTCAGCAATGCCCAAGAGGAACTACTTCAGTGGTATTCAGAAAATGCGAAGGATAATCCTAAGATAATTCATGCAACTGAGAGGTGTGCTGCTGGAATCATACAAGCCATTGGACACTTCAAACTAGGACCTAATGTTTCTCCCCGAGACGTGGATTTCCCTTATGTCAAGGAGAACCCGGTAAAGCCTACGGATGCTGTTGTAAAGTTTTATGTTCTCTACGAGAAGTGGCGTAGGGCTGAGGTTCCAAAGTCTGATTCGGTTACACAGTATTTCAAAAATATAACTCATGCAAATGGAGTTATTATTCATCCTGCTGGGCTTGAGTGTTCTCTTCATGCATCAATTGATGCATTGGGGTCATGTTACGGTGACAAACAAGGGAAGAAATACAGAGCATGGGTGGACAGACTGGTTGTCTCACAATGTGGTTCAGAGGGTTGGCTGGTGAGATTTAACTTGTGGGAGTTGGAAGGTGATGTGTGGTCGTGTTGTCTGACAAGTCTTGCACTGAATGCGAAGCCTGAAACCCCCGAGGGCTTCGTGGTAACACACATCCACAAAACATGGCTCAAAGGGTACTCATCAGCGGATGAGCAATCGTCCAAGCTTTAGAACCTTTTCTGCACCTCCGTGTGCACATGGAAGGAATTTACTCGAGGATAAATAATGAATCTTCTCTTGAGATTACTTCCTTTTCTTGTCTATATTGTCAATTTTGTTCAAAATACTATGCTGGAGGATTCCCAGAGCCCCAAATTAAGTTTGACACATCCTTGTTTGATGTGTAAGATAAATCATAAATGTTACTGTATATCTCATGATTATCATGAGCGCATAAAGCAAAACTACTTCACTTGAATATATGTTACTA]
[+] EMBL CF323423             [     ACACCTCTCCCTCTCCCTCCTCCCCCGCGCGCCCCGCGGCCTCCGCCACCCGCGCCCTCGCCGTCGCCGCCCCGTCCCGTGCCTCCTGCTCCCTCCGCCGCCGCGCGCGCGGCGCGTCGCAGGCTGGTAAAATGGATAAGCTCAATGGTTCTGCGCGTCTCATGATTGTTTCAGATCTTGACCATACAATGGTTGATCATCATGACGAGGAGAACCTGTCATTGCTTAGATTTGGTGCCCTGTGGGAGTCTGTTTACTGCCAGGATTCTTTACTTGTATTTTCGACTGGAAGATCACCTACCCTGTATATGGAATTGAGGAAAGAGAAACCTATGCTAACTCCAGACATCACTATCATGTCTGTGGGCACTGAGATAACATATGGTGAGGAAATGGTTCCTGATGATGGCTGGGTGGAATATCTGAATAATAAGTGGGACAGGAATATTGTTGTTGAGGAGACAGCAAATGTTTCCGAGCTGAAACTTCAGGTAGAGTCGGAACAGCGTCCACATAAGGTCAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB674401             [             CCCTCTCCCTCCTCCCCCGCGCGCCCCGCGGCCTCCGCCACCCGCGCCCTCGCCGTCGCCGCCCCGTCCCGTGCCTCCTGCTCCCTCCGCCGCCGCGCGCGCGGCGCGTCGCAGGCTGGTAAAATGGATAAGCTCAATGGTTCTGCGCGTCTCATGATTGTTTCAGATCTTGACCATACAATGGTTGATCATCATGACGAGGAGAACCTGTCATTGCTTAGATTTGGTGCCCTGTGGGAGTCTGTTTACTGCCAGGATTCTTTACTTGTATTTTCGACTGGAAGATCACCTACCCTGTATATGGAATTGAGGAAAGAGAAACCTATGCTAACTCCAGACATCACTATCATGTCTGTGGGCACTGAGATAACATATGGTGAGGAAATGGTTCCTGATGATGGCTGGGTGGAATATCTGAATAATAAGTGGGACAGGAATATTGTTGTTGAGGAGACAGCAAATGTTTCCGAGCTGAAACTTCAGGTAGAGTCGGAACAGCGTCCACATAAGGTCAGCTTCTATGTTGACAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCTGAGAAGTTGGAGAAACGTGGGCTAGATGTTAAAATAATCTATAGCGGTGGCCAGGACCTTGATGTATTACCTCAAGGTGCTGGAAAGGGTCAGGCACTTGCATATTTGCTCAAGAAGTTAAGCTCATGTGGAAAACCACCCAATAATACTCTTGCTTGCGGTGACTCTGGCAACGATGCAGAATTATTCAGCATCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB674402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATAATCTATAGCGGTGGCCAGGACCTTGATGTATTACCTCAAGGTGCTGGAAAGGGTCAGGCACTTGCATATTTGCTCAAGAAGTTAAGCTCATGTGGAAAACCACCCAATAATACTCTTGCTTGCGGTGACTCTGGCAACGATGCAGAATTATTCAGCATCCCTGGTGTACATGGTGTCATGGTCAGCAATGCCCAAGAGGAACTACTTCAGTGGTATTCAGAAAATGCGAAGGATAATCCTAAGATAATTCATGCAACTGAGAGGTGTGCTGCTGGAATCATACAAGCCATTGGACACTTCAAACTAGGACCTAATGTTTCTCCCCGAGACGTGGATTTCCCTTATGTCAAGGAGAACCCGGTAAAGCCTACGGATGCTGTTGTAAAGTTTTATGTTCTCTACGAGAAGTGGCGTAGGGCTGAGGTTCCAAAGTCTGATTCGGTTACACAGTATTTCAAAAATATAACTCATGCAAATGGAGTTATTATTCATCCTGCTGGGCTTGAGTGTTCTCTTCATGCATCAATTGATGCATTGGGGTCATGTTACGGTGACAAACAAGGGAAGAAATACAGAGCATGGGTGGACAGACTGGTTGTCTCACAATGTGGTTCAGAGGGTTGGCTGGTGAGATTTAACTTGTGGGAGTTGGAAGGTGATGTGTGGTCGTGTTGTCTGACAAGTCTTGCACTGAATGCGAAGCCTGAAACCCCCGAGGGCTTCGTGGTAACACACATCCACAAAACATGGCTCAAAGGGTACTCATCAGCGGATGAGCAATCGTCCAAGCTTTAGAACCTTTTCTGCACCTCCGTGTGCACAAGGAA                                                                                                                                                                                                                                   ]


>consensus_12324#1 CGCACACACCTCTCCCTCTCCCTCCTCCCCCGCGCGCCCCGCGGCCTCCGCCACCCGCGC CCTCGCCGTCGCCGCCCCGTCCCGTGCCTCCTGCTCCCTCCGCCGCCGCGCGCGCGGCGC GTCGCAGGCTGGTAAAATGGATAAGCTCAATGGTTCTGCGCGTCTCATGATTGTTTCAGA TCTTGACCATACAATGGTTGATCATCATGACGAGGAGAACCTGTCATTGCTTAGATTTGG TGCCCTGTGGGAGTCTGTTTACTGCCAGGATTCTTTACTTGTATTTTCGACTGGAAGATC ACCTACCCTGTATATGGAATTGAGGAAAGAGAAACCTATGCTAACTCCAGACATCACTAT CATGTCTGTGGGCACTGAGATAACATATGGTGAGGAAATGGTTCCTGATGATGGCTGGGT GGAATATCTGAATAATAAGTGGGACAGGAATATTGTTGTTGAGGAGACAGCAAATGTTTC CGAGCTGAAACTTCAGGTAGAGTCGGAACAGCGTCCACATAAGGTCAGCTTCTATGTTGA CAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCTGAGAAGTTGGAGAAACGTGGGCT AGATGTTAAAATAATCTATAGCGGTGGCCAGGACCTTGATGTATTACCTCAAGGTGCTGG AAAGGGTCAGGCACTTGCATATTTGCTCAAGAAGTTAAGCTCATGTGGAAAACCACCCAA TAATACTCTTGCTTGCGGTGACTCTGGCAACGATGCAGAATTATTCAGCATCCCTGGTGT ACATGGTGTCATGGTCAGCAATGCCCAAGAGGAACTACTTCAGTGGTATTCAGAAAATGC GAAGGATAATCCTAAGATAATTCATGCAACTGAGAGGTGTGCTGCTGGAATCATACAAGC CATTGGACACTTCAAACTAGGACCTAATGTTTCTCCCCGAGACGTGGATTTCCCTTATGT CAAGGAGAACCCGGTAAAGCCTACGGATGCTGTTGTAAAGTTTTATGTTCTCTACGAGAA GTGGCGTAGGGCTGAGGTTCCAAAGTCTGATTCGGTTACACAGTATTTCAAAAATATAAC TCATGCAAATGGAGTTATTATTCATCCTGCTGGGCTTGAGTGTTCTCTTCATGCATCAAT TGATGCATTGGGGTCATGTTACGGTGACAAACAAGGGAAGAAATACAGAGCATGGGTGGA CAGACTGGTTGTCTCACAATGTGGTTCAGAGGGTTGGCTGGTGAGATTTAACTTGTGGGA GTTGGAAGGTGATGTGTGGTCGTGTTGTCTGACAAGTCTTGCACTGAATGCGAAGCCTGA AACCCCCGAGGGCTTCGTGGTAACACACATCCACAAAACATGGCTCAAAGGGTACTCATC AGCGGATGAGCAATCGTCCAAGCTTTAGAACCTTTTCTGCACCTCCGTGTGCACATGGAA GGAATTTACTCGAGGATAAATAATGAATCTTCTCTTGAGATTACTTCCTTTTCTTGTCTA TATTGTCAATTTTGTTCAAAATACTATGCTGGAGGATTCCCAGAGCCCCAAATTAAGTTT GACACATCCTTGTTTGATGTGTAAGATAAATCATAAATGTTACTGTATATCTCATGATTA TCATGAGCGCATAAAGCAAAACTACTTCACTTGAATATATGTTACTA



consensusID : consensus_12324#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1591
fasta sequence
                              [TCCCGACTCCTGAGAGAAGAAGAACCGCTGCTTCTCCACCCGTCGCGGAGCCCCGTGTCCATCCTCCGGCGCGGCGGCCGCCCCCCAGCGATCCGCCTCAGGTTGCTAAAATGGATAAGCTCAGTGGTTCTGCACGTCTTATTATCGTTTCAGATCTTGACCACACGATGGTTGATCATCACGATGAGGAGAACTTATCCTTGCTTAGATTTGGCGCCCTGTGGGAGTCCGTTTACTGTCAGGATTCTCTACTAGTATTTTCAACTGGAAGATCCCCTACTCTTTATAAGGAATTGAGGAAAGAGAAGCCTATGCTAACTCCAGACATCACTATCATGTCTGTGGGGACTGAGATAACATATGGTGAGGCAATGGTTCCTGATGATGGTTGGGAGGAATATCTGAACAATAAGTGGGACAGGAATGTAGTTGTGGAGGAGACAGCTAAGTTTTCTGAGCTGAAGCTTCAGCCAGAGACAGAACAGCGTCCACATAAGGTCAGCTTTTTTGTTGATAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCCGGTAATATGGAGAAATGCGGGCTTGATGTTAAAATAATCTACAGTGGTGGCCAAGACCTTGACATATTACCTCAGGGCGCTGGGAAGGGTCAAGCACTTGCATATTTGCTTAAGAAGTTAAGCTCCTGTGGAAAACCACCAAACAATACTCTTGTTTGTGGGGACTCTGGTAATGATGCAGAATTATTTAGCATCCCTGGTGTACATGGTGTCATGGTTAGCAATGCCCAAGAGGAATTGCTTCAGTGGTATGCAGAAAATGCGAAGGGTAACCCTAAAATTATTCATGCAACTGAGAGGTGCGCCGCTGGTATTATCGAAGCTATTGGACACTTCAAACTAGGACCTAGTGTTTCTCCAAGAGATGTGGGGTTTCCTTATGTTAAGGAGGACCATATCAAACCTACAGATGCTGTTGTAAAGTTTTACGTTCTCTATGAGAAGTGGCGCAGGGCTGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCACTCATGCAAATGGTGTTATCATTCAACCTTCTGGGCTTGAATGTTCTCTCCATGCCTCTGTTGATGCATTGAGTTCATGTTATGGTGAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGAGGCAGAAGGTGATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCTGGCTTCCTGATAACACATGTACACAAAACATGGCTCAAAGGATACTCTTCAGCGGATGAGCAGTCCTCCAAGCTTTAAACCCTTTTTCACCCCTGTGCACACGGAATGAATTTACTTGATGATAAATGAAGGACCTGCTCGTCTGAGAATCTCATTTTCTTATTTAATGTAATATAAATGATCTGTCTCGTGACTCGTGCGATGATAAAGTGAACGATCTCAGAAGGCAACTTCAACAAATGTTGGATATGATTTTACAGAGAGTTCAGAATTAGATTTCATGACAC]

[+] EMBL AK071525             [TCCCGACTCCTGAGAGAAGAAGAACCGCTGCTTCTCCACCCGTCGCGGAGCCCCGTGTCCATCCTCCGGCGCGGCGGCCGCCCCCCAGCGATCCGCCTCAGGTTGCTAAAATGGATAAGCTCAGTGGTTCTGCACGTCTTATTATCGTTTCAGATCTTGACCACACGATGGTTGATCATCACGATGAGGAGAACTTATCCTTGCTTAGATTTGGCGCCCTGTGGGAGTCCGTTTACTGTCAGGATTCTCTACTAGTATTTTCAACTGGAAGATCCCCTACTCTTTATAAGGAATTGAGGAAAGAGAAGCCTATGCTAACTCCAGACATCACTATCATGTCTGTGGGGACTGAGATAACATATGGTGAGGCAATGGTTCCTGATGATGGTTGGGAGGAATATCTGAACAATAAGTGGGACAGGAATGTAGTTGTGGAGGAGACAGCTAAGTTTTCTGAGCTGAAGCTTCAGCCAGAGACAGAACAGCGTCCACATAAGGTCAGCTTTTTTGTTGATAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCCGGTAATATGGAGAAATGCGGGCTTGATGTTAAAATAATCTACAGTGGTGGCCAAGACCTTGACATATTACCTCAGGGCGCTGGGAAGGGTCAAGCACTTGCATATTTGCTTAAGAAGTTAAGCTCCTGTGGAAAACCACCAAACAATACTCTTGTTTGTGGGGACTCTGGTAATGATGCAGAATTATTTAGCATCCCTGGTGTACATGGTGTCATGGTTAGCAATGCCCAAGAGGAATTGCTTCAGTGGTATGCAGAAAATGCGAAGGGTAACCCTAAAATTATTCATGCAACTGAGAGGTGCGCCGCTGGTATTATCGAAGCTATTGGACACTTCAAACTAGGACCTAGTGTTTCTCCAAGAGATGTGGGGTTTCCTTATGTTAAGGAGGACCATATCAAACCTACAGATGCTGTTGTAAAGTTTTACGTTCTCTATGAGAAGTGGCGCAGGGCTGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCACTCATGCAAATGGTGTTATCATTCAACCTTCTGGGCTTGAATGTTCTCTCCATGCCTCTGTTGATGCATTGAGTTCATGTTATGGTGAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGAGGCAGAAGGTGATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCTGGCTTCCTGATAACACATGTACACAAAACATGGCTCAAAGGATACTCTTCAGCGGATGAGCAGTCCTCCAAGCTTTAAACCCTTTTTCACCCCTGTGCACACGGAATGAATTTACTTGATGATAAATGAAGGACCTGCTCGTCTGAGAATCTCATTTTCTTATTTAATGTAATATAAATGATCTGTCTCGTGACTCGTGCGATGATAAAGTGAACGATCTCAGAAGGCAACTTCAACAAATGTTGGATATGATTTTACAGAGAGTTCAGAATTAGATTTCATGACAC]
[+] EMBL CF196797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGAGGAATTGCTTCAGTGGTATGCAGAAAATGCGAAGGGTAACCCTAAAATTATTCATGCAACTGAGAGGTGCGCCGCTGGTATTATCGAAGCTATTGGACACTTCAAACTAGGACCTAGTGTTTCTCCAAGAGATGTGGGGTTTCCTTATGTTAAGGAGGACCATATCAAACCTACAGATGCTGTTGTAAAGTTTTACGTTCTCTATGAGAAGTGGCGCAGGGCTGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCACTCATGCAAATGGTGTTATCATTCAACCTTCTGGGCTTGAATGTTCTCTCCATGCCTCTGTTGATGCATTGAGTTCATGTTATGGTGAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGAGGCAGAAGGTGATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGNNNCCCCTGCTGGCTTCCTGATAACACATGTACACAAAACATGGCTCAAAGGATACTCTTCAGCGGATGNNNNGTCCT                                                                                                                                                                                                                            ]
[-] EMBL BI305761             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATTGAGTTCATGTTATGGTGAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGAGGCAGAAGGTGATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCTGGCTTCCTGATAACACATGTACACAAAACATGGCTCAAAGGATACTCTTCAGCGGATGAGCAGTCCTCCAAGCTTTAAACCCTTTTTCACCCCTGTGCACACGGAATGAATTTACTTGATGATAAATGAAGGACCTGCTCGTCTGAGAATCTCATTTTCTTATTTAATGTAATATAAATGATCTGTCTCGTGACTCGTGCGATGATAAAGTGAACGATCTCAGAAGGCAACTTCAACAAATGTTGGATATGAT                                  ]
[-] EMBL BI306039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATTGAGTTCATGTTATGGTGAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGAGGCAGAAGGTGATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCTGGCTTCCTGATAACACATGTACACAAAACATGGCTCAAAGGATACTCTTCAGCGGATGAGCAGTCCTCCAAGCTTTAAACCCTTTTTCACCCCTGTGCACACGGAATGAATTTACTTGATGATAAATGAAGGACCTGCTCGTCTGAGAATCTCATTTTCTTATTTAATGTAATATAAATGATCTGTCTCGTGACTCGTGCGATGATAAAGTGAACGATCTCAGAAGGCAACTTCAACAAATGTTGGATATGAT                                  ]


>consensus_12324#2 TCCCGACTCCTGAGAGAAGAAGAACCGCTGCTTCTCCACCCGTCGCGGAGCCCCGTGTCC ATCCTCCGGCGCGGCGGCCGCCCCCCAGCGATCCGCCTCAGGTTGCTAAAATGGATAAGC TCAGTGGTTCTGCACGTCTTATTATCGTTTCAGATCTTGACCACACGATGGTTGATCATC ACGATGAGGAGAACTTATCCTTGCTTAGATTTGGCGCCCTGTGGGAGTCCGTTTACTGTC AGGATTCTCTACTAGTATTTTCAACTGGAAGATCCCCTACTCTTTATAAGGAATTGAGGA AAGAGAAGCCTATGCTAACTCCAGACATCACTATCATGTCTGTGGGGACTGAGATAACAT ATGGTGAGGCAATGGTTCCTGATGATGGTTGGGAGGAATATCTGAACAATAAGTGGGACA GGAATGTAGTTGTGGAGGAGACAGCTAAGTTTTCTGAGCTGAAGCTTCAGCCAGAGACAG AACAGCGTCCACATAAGGTCAGCTTTTTTGTTGATAAAAAGAGTGCTCAGGAAGTGATAA AGTCTCTCTCCGGTAATATGGAGAAATGCGGGCTTGATGTTAAAATAATCTACAGTGGTG GCCAAGACCTTGACATATTACCTCAGGGCGCTGGGAAGGGTCAAGCACTTGCATATTTGC TTAAGAAGTTAAGCTCCTGTGGAAAACCACCAAACAATACTCTTGTTTGTGGGGACTCTG GTAATGATGCAGAATTATTTAGCATCCCTGGTGTACATGGTGTCATGGTTAGCAATGCCC AAGAGGAATTGCTTCAGTGGTATGCAGAAAATGCGAAGGGTAACCCTAAAATTATTCATG CAACTGAGAGGTGCGCCGCTGGTATTATCGAAGCTATTGGACACTTCAAACTAGGACCTA GTGTTTCTCCAAGAGATGTGGGGTTTCCTTATGTTAAGGAGGACCATATCAAACCTACAG ATGCTGTTGTAAAGTTTTACGTTCTCTATGAGAAGTGGCGCAGGGCTGAGGTTCCAAAAT CAGATTCAGTTGTACAGTACTTCAAAAATATCACTCATGCAAATGGTGTTATCATTCAAC CTTCTGGGCTTGAATGTTCTCTCCATGCCTCTGTTGATGCATTGAGTTCATGTTATGGTG AGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTT CAGACAGTTGGCTGGTCAGATTTGACTTGTGGGAGGCAGAAGGTGATGCGCGGTTGTGCT GTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCTGGCTTCCTGATAACAC ATGTACACAAAACATGGCTCAAAGGATACTCTTCAGCGGATGAGCAGTCCTCCAAGCTTT AAACCCTTTTTCACCCCTGTGCACACGGAATGAATTTACTTGATGATAAATGAAGGACCT GCTCGTCTGAGAATCTCATTTTCTTATTTAATGTAATATAAATGATCTGTCTCGTGACTC GTGCGATGATAAAGTGAACGATCTCAGAAGGCAACTTCAACAAATGTTGGATATGATTTT ACAGAGAGTTCAGAATTAGATTTCATGACAC



consensusID : consensus_12324#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence
                              [CNCGATGCCGCTTTANNACTGCCGAATTCGGCACCNNGTTTCCTAATGTTAAGGANGACATATCAAACCTACAGATGCTGTTGTAAAGTTTTACNTTCTCTATGANAAGTGGCGCAGGGCTGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCACTCATGCAAATGGTGTTATCATTCAACCTTCTGGGCTTGAATGTTCTCTCCATGCCTCTGTTGATGCATTGAAGTTCATGTTATGGTGAAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGANGCAGAANGTGATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCTGGCTTCCTGATAACACATGTTACACAAAACATGGCTCAAAGGGATACTCTTCACGGGATGANCAGTCCTCCAAAGCTTTAAACCCTTTTTCACCCCTGTGCACACGGAAATGAAATTTACTTGATGAATAAATGAAAGAACTGCTCGTCTGAAAAATCTCATTTTTCTTATTTAATGTTAATATAAAATGATCTGTCTCCGTGACTCCGTG]

[+] EMBL AA752973             [CNCGATGCCGCTTTANNACTGCCGAATTCGGCACCNNGTTTCCTAATGTTAAGGANGACATATCAAACCTACAGATGCTGTTGTAAAGTTTTACNTTCTCTATGANAAGTGGCGCAGGGCTGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCACTCATGCAAATGGTGTTATCATTCAACCTTCTGGGCTTGAATGTTCTCTCCATGCCTCTGTTGATGCATTGAAGTTCATGTTATGGTGAAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGANGCAGAANGTGATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCTGGCTTCCTGATAACACATGTTACACAAAACATGGCTCAAAGGGATACTCTTCACGGGATGANCAGTCCTCCAAAGCTTTAAACCCTTTTTCACCCCTGTGCACACGGAAATGAAATTTACTTGATGAATAAATGAAAGAACTGCTCGTCTGAAAAATCTCATTTTTCTTATTTAATGTTAATATAAAATGATCTGTCTCCGTGACTCCGTG]


>consensus_12324#3 CNCGATGCCGCTTTANNACTGCCGAATTCGGCACCNNGTTTCCTAATGTTAAGGANGACA TATCAAACCTACAGATGCTGTTGTAAAGTTTTACNTTCTCTATGANAAGTGGCGCAGGGC TGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCACTCATGCAAATGG TGTTATCATTCAACCTTCTGGGCTTGAATGTTCTCTCCATGCCTCTGTTGATGCATTGAA GTTCATGTTATGGTGAAGAAACAAGGGAAAAAATACCGAACATGGGTGGACAGACTATTT GTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTGACTTGTGGGANGCAGAANGT GATGCGCGGTTGTGCTGTTTGACAAGTCTTGCGCTGAATGTAAAGCCTGAAACCCCTGCT GGCTTCCTGATAACACATGTTACACAAAACATGGCTCAAAGGGATACTCTTCACGGGATG ANCAGTCCTCCAAAGCTTTAAACCCTTTTTCACCCCTGTGCACACGGAAATGAAATTTAC TTGATGAATAAATGAAAGAACTGCTCGTCTGAAAAATCTCATTTTTCTTATTTAATGTTA ATATAAAATGATCTGTCTCCGTGACTCCGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12324#2      --------------------------TCCCGACTCCTGAGAGAAGAAGAACCGCTGCTTC 34
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      CGCACACACCTCTCCCTCTCCCTCCTCCCCCGCGCGCCCCGCGGCCTCCGCCACCCGCGC 60
consensus_12324#0      ---------------------------------------------CACTTGTTCAGGGAA 15
                                                                                   

consensus_12324#2      TCCACCCGTCGCGGAGCCCCGTGTCCATCCTCCGGCGCGGCGGCCGCCCCCCAGCGATCC 94
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      CCTCGCCGTCGCCGCCCCGTCCCGTGCCTCCTGCTCCCTCCGCCGCCGCGCGCGCGGCGC 120
consensus_12324#0      GTGTACAGGTTAGATTCTAAAAGTTTTCAACAATTTGCACAGGGATTTCTTCTTCAG--C 73
                                                                                   

consensus_12324#2      GCCTCAGGTTGCTAAAATGGATAAGCTCAGTGGTTCTGCACGTCTTATTATCGTTTCAGA 154
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      GTCGCAGGCTGGTAAAATGGATAAGCTCAATGGTTCTGCGCGTCTCATGATTGTTTCAGA 180
consensus_12324#0      TGCACCGCGAAGAAACATGGATAAGCTCGATGGCTCTGCCCGTCTTATGATAGTTTCCGA 133
                                                                                   

consensus_12324#2      TCTTGACCACACGATGGTTGATCATCACGATGAGGAGAACTTATCCTTGCTTAGATTTGG 214
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      TCTTGACCATACAATGGTTGATCATCATGACGAGGAGAACCTGTCATTGCTTAGATTTGG 240
consensus_12324#0      TCTTGACCAGACAATGATTGATCACAATGATCCGAAGAACTTGTCCTTGCTTAGGTTCCA 193
                                                                                   

consensus_12324#2      CGCCCTGTGGGAGTCCGTTTACTGTCAGGATTCTCTACTAGTATTTTCAACTGGAAGATC 274
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      TGCCCTGTGGGAGTCTGTTTACTGCCAGGATTCTTTACTTGTATTTTCGACTGGAAGATC 300
consensus_12324#0      GGCGCTATGGGAGTCCGAGTTCTCCCAAGATTCTCTACTGGTCTTCTCGACTGGAAGATC 253
                                                                                   

consensus_12324#2      CCCTACTCTTTATAAGGAATTGAGGAAAGAGAAGCCTATGCTAACTCCAGACATCACTAT 334
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      ACCTACCCTGTATATGGAATTGAGGAAAGAGAAACCTATGCTAACTCCAGACATCACTAT 360
consensus_12324#0      ACCTATCAGTTACAGGGGTTTGAGAACACAGAAGCCTTTGATCACTCCAGACATCACTAT 313
                                                                                   

consensus_12324#2      CATGTCTGTGGGGACTGAGATAACATATGGTGAGGCAATGGTTCCTGATGATGGTTGGGA 394
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      CATGTCTGTGGGCACTGAGATAACATATGGTGAGGAAATGGTTCCTGATGATGGCTGGGT 420
consensus_12324#0      CATGTCTGTGGGCACTGTGATAGCATATGGTGAAGAGATGATTCATGATGTTGGCTGGGC 373
                                                                                   

consensus_12324#2      GGAATATCTGAACAATAAGTGGGACAGGAATGTAGTTGTGGAGGAGACAGCTAAGTTTTC 454
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      GGAATATCTGAATAATAAGTGGGACAGGAATATTGTTGTTGAGGAGACAGCAAATGTTTC 480
consensus_12324#0      TGAATTCCTTAGCAACAAATGGGATAGGGATATCGTTGTCGAGGAGACAGCTAAGTTCCC 433
                                                                                   

consensus_12324#2      TGAGCTGAAGCTTCAGCCAGAGACAGAACAGCGTCCACATAAGGTCAGCTTTTTTGTTGA 514
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      CGAGCTGAAACTTCAGGTAGAGTCGGAACAGCGTCCACATAAGGTCAGCTTCTATGTTGA 540
consensus_12324#0      TAAGCTGAAGCCTCAGCCAGAGAGGAGTCAGGGTCCTCATAAGGTTAGCTTTTTTGTCGA 493
                                                                                   

consensus_12324#2      TAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCCGGTAATATGGAGAAATGCGGGCT 574
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      CAAAAAGAGTGCTCAGGAAGTGATAAAGTCTCTCTCTGAGAAGTTGGAGAAACGTGGGCT 600
consensus_12324#0      CAAGGAGGGTGCTCGGGAAGTTATGGATTCTCTCCCTGAGACGTTAAATCGGCGTGGGCT 553
                                                                                   

consensus_12324#2      TGATGTTAAAATAATCTACAGTGGTGGCCAAGACCTTGACATATTACCTCAGGGCGCTGG 634
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      AGATGTTAAAATAATCTATAGCGGTGGCCAGGACCTTGATGTATTACCTCAAGGTGCTGG 660
consensus_12324#0      AGATGTTAAAATAATCTTCAGTAGTGGTGAGGCCCTTGATGTATTACCACAAGGTGCAGG 613
                                                                                   

consensus_12324#2      GAAGGGTCAAGCACTTGCATATTTGCTTAAGAAGTTAAGCTCCTGTGGAAAACCACCAAA 694
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      AAAGGGTCAGGCACTTGCATATTTGCTCAAGAAGTTAAGCTCATGTGGAAAACCACCCAA 720
consensus_12324#0      AAAAGGCCAGGCTCTTCTATATTTGCTGAAAAAGTTCAATTCAGATGGGAAACCACCAAA 673
                                                                                   

consensus_12324#2      CAATACTCTTGTTTGTGGGGACTCTGGTAATGATGCAGAATTATTTAGCATCCCTGGTGT 754
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      TAATACTCTTGCTTGCGGTGACTCTGGCAACGATGCAGAATTATTCAGCATCCCTGGTGT 780
consensus_12324#0      CAGTACTCTTGTTTGTGGTGACTCTGGCAATGATGCAGAATTATTCAGTGTCCCATCTGT 733
                                                                                   

consensus_12324#2      ACATGGTGTCATGGTTAGCAATGCCCAAGAGGAATTGCTTCAGTGGTATGCAGAAAATGC 814
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      ACATGGTGTCATGGTCAGCAATGCCCAAGAGGAACTACTTCAGTGGTATTCAGAAAATGC 840
consensus_12324#0      TCATGGTGTCATGGTCAGCAATGCCCAAGAGGAGCTGCTTCAGTGGTATGAAGAAAATGC 793
                                                                                   

consensus_12324#2      GAAGGGTAACCCTAAAATTATTCATGCAACTGAGAGGTGCGCCGCTGGTATTATCGAAGC 874
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      GAAGGATAATCCTAAGATAATTCATGCAACTGAGAGGTGTGCTGCTGGAATCATACAAGC 900
consensus_12324#0      CAGGGGCAATCCTATGATGATTCATGCAACCGAGAGGTGTGCTGCTGGCATCATGCAAGC 853
                                                                                   

consensus_12324#2      TATTGGACACTTCAAACTAGGACCTAGTGTTTCTCCAAGAGATGTGGGGTTTCCTTATGT 934
consensus_12324#3      -----------CNCGATGCCGCTTTANNACTGCCGAATTCGGCACCNNGTTTCCTAATGT 49
consensus_12324#1      CATTGGACACTTCAAACTAGGACCTAATGTTTCTCCCCGAGACGTGGATTTCCCTTATGT 960
consensus_12324#0      TATTGGACACTTCAATTTAGGACCTAACGTTTCCCCAAGAGATCTTGAATTCCCTTACCC 913
                                           *   **    * *       *        ** *** *   

consensus_12324#2      TAAGGAGGACCATATCAAACCTACAGATGCTGTTGTAAAGTTTTACGTTCTCTATGAGAA 994
consensus_12324#3      TAAGGANGAC-ATATCAAACCTACAGATGCTGTTGTAAAGTTTTACNTTCTCTATGANAA 108
consensus_12324#1      CAAGGAGAACCCGGTAAAGCCTACGGATGCTGTTGTAAAGTTTTATGTTCTCTACGAGAA 1020
consensus_12324#0      GAAGTTAGACGCCATCAAACCTGCAGATGTTGTGGTGAAGTTTTATGTTCTCTATGAAAA 973
                        ***    **    * ** *** * **** *** ** ********  ******* ** **

consensus_12324#2      GTGGCGCAGGGCTGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCAC 1054
consensus_12324#3      GTGGCGCAGGGCTGAGGTTCCAAAATCAGATTCAGTTGTACAGTACTTCAAAAATATCAC 168
consensus_12324#1      GTGGCGTAGGGCTGAGGTTCCAAAGTCTGATTCGGTTACACAGTATTTCAAAAATATAAC 1080
consensus_12324#0      ATGGCGGCAGGGTGAGGTTCAAAAGGCCCCATTCATTATCCAGTATTTGAAAAGGATTAC 1033
                        *****   ** ******** ***  *    *   **   ***** ** ****  ** **

consensus_12324#2      TCATGCAAATGGTGTTATCATTCAACCTTCTGGGCT---TGAAT---GTTCTCTCCATG- 1107
consensus_12324#3      TCATGCAAATGGTGTTATCATTCAACCTTCTGGGCT---TGAAT---GTTCTCTCCATG- 221
consensus_12324#1      TCATGCAAATGGAGTTATTATTCATCCTGCTGGGCT---TGAGT---GTTCTCTTCATG- 1133
consensus_12324#0      T---GTAAGTACATTCCTCAGCTACATTCTTAGAATAACTCAGTCTAGCTTTGTTCATAA 1090
                       *   * ** *    *  * *   *   *  * *  *   * * *   * * * * ***  

consensus_12324#2      -CCTCTGTTGATGCATTGA-GTTCATGTTATGGTGA-GAAACAAGGGAAAAAATACCGAA 1164
consensus_12324#3      -CCTCTGTTGATGCATTGAAGTTCATGTTATGGTGAAGAAACAAGGGAAAAAATACCGAA 280
consensus_12324#1      -CATCAATTGATGCATTGG-GGTCATGTTACGGTGA-CAAACAAGGGAAGAAATACAGAG 1190
consensus_12324#0      ACCCCTCTTTTTGAAATCAATCATACCTTTTGTCGA--CTGCTATAGTTAGGTTAT-GAA 1147
                        *  *  **  ** * *       *  **  *  **     * *  *      **  ** 

consensus_12324#2      CATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTG 1224
consensus_12324#3      CATGGGTGGACAGACTATTTGTCTCACAGTCTGGTTCAGACAGTTGGCTGGTCAGATTTG 340
consensus_12324#1      CATGGGTGGACAGACTGGTTGTCTCACAATGTGGTTCAGAGGGTTGGCTGGTGAGATTTA 1250
consensus_12324#0      AAGAGGTAACTATATAATTTGTGTCAGCATGTTATCTATAATTTTGCAAAAGTAATTTCA 1207
                        *  ***    * *    **** ***   * *  *  * *   ***       *  **  

consensus_12324#2      ACTTGTGGGAGGCAGAAGGTGA--TGCGCGGT----TGTGCTGTTTGACAAGTCTTGCGC 1278
consensus_12324#3      ACTTGTGGGANGCAGAANGTGA--TGCGCGGT----TGTGCTGTTTGACAAGTCTTGCGC 394
consensus_12324#1      ACTTGTGGGAGTTGGAAGGTGA--TGTGTGGT----CGTGTTGTCTGACAAGTCTTGCAC 1304
consensus_12324#0      GACCATATGATACCACTTGTCTCTTGTCTGGCGAAATGTACATATTTATGATTCTTTTTT 1267
                            *  **        **    **   **      **      * *  * ****    

consensus_12324#2      TGAATGTAAAGCCTGA--AACCCCTGCTGGCTTCCTGATAACACATGT-ACACAAAACAT 1335
consensus_12324#3      TGAATGTAAAGCCTGA--AACCCCTGCTGGCTTCCTGATAACACATGTTACACAAAACAT 452
consensus_12324#1      TGAATGCGAAGCCTGA--AACCCCCGAGGGCTTCGTGGTAACACACAT-CCACAAAACAT 1361
consensus_12324#0      TTTGGCGAGGATATTACTGGTTCATATTGGCTTCCTTGAGCAACATTT-AAACCGATCTT 1326
                       *            * *      *     ****** *      ***  *   **  * * *

consensus_12324#2      GG-------CTCAAAGG-ATACTCTTCAGCGGATG-AGCAGTCCTCCAA-GCTTTAAAC- 1384
consensus_12324#3      GG-------CTCAAAGGGATACTCTTCACGGGATG-ANCAGTCCTCCAAAGCTTTAAAC- 503
consensus_12324#1      GG-------CTCAAAGG-GTACTCATCAGCGGATG-AGCAATCGTCCAA-GCTTTAGAA- 1410
consensus_12324#0      CTTCTTCTTCTTTTATGTGTGTTAGCATCCTAATGGAACAACTATTCATCCTTCTGGAAG 1386
                                **   * *  *  *         *** * **    * **    * *  *  

consensus_12324#2      --------CCTTTTT--CACCCCTGTGCACACGGAAT--GAATTTACTTGATGA-TAAAT 1431
consensus_12324#3      --------CCTTTTT--CACCCCTGTGCACACGGAAATGAAATTTACTTGATGAATAAAT 553
consensus_12324#1      --------CCTTTTCTGCACCTCCGTGTGCACATGGAAGGAATTTACTCGAGGA-TAAAT 1461
consensus_12324#0      GGAGTGTTCACTTCATGCATCCATTGATGCACTGAGTTCATGTTATGCTGATAAACAAGG 1446
                               *  **    ** *        ***          **     **  *  **  

consensus_12324#2      GAAGGACCTGCTCGTCTGAGAA-TCTCATTTT-CTTATTTAATGT-AATAT-----AAA- 1482
consensus_12324#3      GAAAGAACTGCTCGTCTGAAAAATCTCATTTTTCTTATTTAATGTTAATAT-----AAAA 608
consensus_12324#1      AATGAATCTTCTCTTGAGATTACTTCCTTTTCTTGTCTATATTGTCAATTTTGTTCAAAA 1521
consensus_12324#0      CAAGAAGTTCCGAGTATGGGTGGATAGAATTGTCGCTTCATCAATCGGTAC------AAT 1500
                        *   *  * *   *  *           **      *      *   *        ** 

consensus_12324#2      TGATCTGTCTC-GTGACTC-----GTGCGATGATAAAGTGAACGA--TCT-CAGAAGGCA 1533
consensus_12324#3      TGATCTGTCTCCGTGACTCC----GTG--------------------------------- 631
consensus_12324#1      TACTATG-CTGGAGGATTCCCAGAGCCCCAAATTAAGTTTGACACATCCT-TGTTTGATG 1579
consensus_12324#0      TAATTGGCTGGTGAGGTTTGACAAGTGGGAAATGGAAGGCAATGTTCGGTATTGCTGCCT 1560
                       *  *  *       *  *      *                                   

consensus_12324#2      ACTTCAACAAATGTTGGATATGA---TTTTACAGAGAGTTCAGAATTAGATTTCATGACA 1590
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      TGTAAGATAAATCATAAATGTTA---CTGTATATCTCATGATTATCATGAGCGCATAAAG 1636
consensus_12324#0      CACAACTCTTCTGCTGACTATGAAGCCTGAGACTGAAGATGGCTTCGAGATTACACACAT 1620
                                                                                   

consensus_12324#2      C----------------------------------------------------------- 1591
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      CAAAACTACTTCACTTGAATATATGTTACTA----------------------------- 1667
consensus_12324#0      CCACAAGACCTGGCTTGAAGGATACTCTGCAGGAAATGAGCATGCATGCATCCTGTAGGC 1680
                                                                                   

consensus_12324#2      ------------------------------------------------------------
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      ------------------------------------------------------------
consensus_12324#0      CATTTAAATACAGGCAACTTACACAGAAACATGAGGAAATTTTCATCAGGAGTCAAGATA 1740
                                                                                   

consensus_12324#2      ------------------------------------------------------------
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      ------------------------------------------------------------
consensus_12324#0      GAATAACAAGTGTACTCACTGTTGCGTGGATTTGATCCCAAATACTCGTAGTGTTATACT 1800
                                                                                   

consensus_12324#2      ------------------------------------------------------------
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      ------------------------------------------------------------
consensus_12324#0      GGGGTACTCACAAATGGATTGATGCTCTTGCTGATTCATGTACAGTTCATGAAATTAAGC 1860
                                                                                   

consensus_12324#2      ------------------------------------------------------------
consensus_12324#3      ------------------------------------------------------------
consensus_12324#1      ------------------------------------------------------------
consensus_12324#0      AAATAAACTCACTGTACCAGAAATTTTCTCGATGTACATGGATCTTGATACTTTCTTAAA 1920
                                                                                   

consensus_12324#2      -------------
consensus_12324#3      -------------
consensus_12324#1      -------------
consensus_12324#0      GCTCATTTTAAGG 1933
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)