cluster # 12333

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Oryza sativa
cluster # 12333 cluster # 12333 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12333#0 length = 2448 sequences # 9

consensus_12333#1 length = 511 sequences # 1

consensusID : consensus_12333#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2448
fasta sequence

                              [CTATATAAATCTCCATCCCCCCCGCCCCCAGAGATCCCCCAATCCACTCGATTCGATCCAATCCGGCGAGGTACAGGATGCTGCCGGGGTCGGCGGCGCCGGCGGCTGGGAGCGGCATGTTCGTGCCAACGCAGACGGTGGGCACGGTGCTGTGCTGCATCTGCGGCGTGGCGATGCAGCCCAACCCGGCCAACATGTGCGCGCGCTGCATCCGCGCCCGCGTCGACATCACCGAGGGCGTCCCGCGCCACGCCGCCGTCGTCTA-CTGCCCCGAC-TGCACCTCCTACCTCCAGCCGCC-GCGCTCCTGGCTCCGCGCCGGCCCGGAGTCCCCCGAGCTCATGCAGATCCTCCTCCGCCGCCTCAACCGCCCCCTCGCCCGCCTCCGCGTCTCCCTCTCCGCCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCTTCAACGCCGTCGTCCTCGAGCAGACCCACCCCGTCGAGTTCACCGTCCACGATCGCCTCTGCGATGCCTGCGCCCGCGCCCAGTCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCACCTTCCTCTACCTCGAGCAGCTCCTCCTCAAGCACGGCCAGGCCTCCCTCGCCCTCCGCGTCGCCGCCGCCCCCGGCGGCCTCGACTTCTTCTTCGGCTCCCGCTCGCACGCCGCCCGCCTCGTCGACTTCCTCGCCACCGTCGCCCCCGTCCAGACCCAGACCGCCAAGCAGCTCGTCTCCCACGACACCAAGAGCAACGTCTACAACTACAAGCACACCTTCTCCGTCGAGATCTGCCCCATCTGCCGGGAGGACCTCATCGCCCTTAGCCCTCAGGTGTCCCGCGATCTTGGAGGCCTTGGACCTATCGTCCTCTGCATCAAGGTCACCAATGCCATCGCTCTGCTTGACCCCCTCACCCTGCGTGTGCACCACCTCGAGGAAAAGAAGTACAGGGTCTACAACTTCAAGGCTGCTCTCACCAGCAAGCAGCTCGTCGAGTACATCGTGCTAGACATCGAGCACGAGTCACCAGAGATTACCATTGACGGATCTCGCTACCAGTTGGCTTATGCCCAGGTCGCCCGGGTCTCCGACTTTGGGAAAAACGACACCATGTTCACCGTGCGGACTCATCTTGGCCACCTGCTGAATCCTGGAGACCTTGCCCTTGGGTATGATCTTTATGGTGCCAACTTGAATGATGATGACATGGACACAGCTATGATGCGCCACAGTCTGCCTGAAGTCATTCTTGTTAAGAAGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCC-AATGGAGGAAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGTTTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATA-CAAGGATGAGGACTA-CAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTGAGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGCCTTCTGGT-GA-T-GGTTGCTGCCAACCGCAGATC-ATAGG-TCTGAACTGCATCTGTTTAA-TCCGTATAAGTTTTGTTCTCCCCTTTA-CTTC---TA---TAA--GTTATAAGTTTTGTTGCTAAATTGTTTCAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATC-CTGTATCTGGTGTTGCAGCTTGGCTTAAATTATATTTCTCTATTCTTATTGTCTGTGATATGTTGTTTTCTTGCCATAGTGTGGCTGATCACAACATATCTTAAAATAGATGCATTGTTTGATTTCCAAAACATCTAGTTTGGTGTTTAGATTGTGCCAGATTCATATTTTTACTATATGTTTTTAGTCCCCATTATGTGGTTTGCAAGCGTGGAATATGATTGTGGATTTATGCTGAGTCATGACTAGAGAATTGTAGGTATGACCTGAAAACGTCTGCCATGTTGAGTGTCACTCCAATAAATTGATTAAAAAACTAATAAAGATAAGTGTAGTATAATATCATACCCAGGAGCCATGATGAGACAATAATGTGCATTTTTAGTGATTGCAATTCAACTGCTGCTGTTTTATCAGGCACTTCATTCAGACTATGCCTACATCGTGCAATAAGAGGTTAGATGTAGAGTTGATGGACAGAACAGATGGTGCTCCACTAATAAGCGATGAGTACTGGTTTGGTAAAACTTTAATAAGTTAAGAATTTTACGGATCTTTTTTTTCTTTTACTTTCACAAGGTGGTGCTGTTCTCAAACCTAATGAC]

[+] EMBL C72416               [CTATATAAATCTCCATCCCCCCCGCCCCCAGAGATCCCCCAATCCACTCGATTCGATCCAATCCGGCGAGGTACAGGATGCTGCCGGGGTCGGCGGCG CGGCGGCTGGGAGCGGCATGTTCGTGCCAACGCAGACGGTGGGCACGGTGCTGTGCTGCATCTGCGGCGTGGCGATGCAGCCCAACCCGGCCAACATGTGCGCGCGCTGCATCCGCGCCCGCGTCGACATCACCGAGGGCGTCCCGCGCCACGCCGCCGTCGTCTANTTGCCCCGACTTGCACCTCCTACCTCCAGCCGCCGGCGCTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK101216             [                                       CAATCCACTCGATTCGATCCAATCCGGCGAGGTACAGGATGCTGCCGGGGTCGGCGACGCCGGCGGCTGGGAGCGGCATGTTCGTGCCAACGCAGACGGTGGGCACGGTGCTGTGCTGCATCTGCGGCGTGGCGATGCAGCCCAACCCGGCCAACATGTGCGCGCGCTGCATCCGCGCCCGCGTCGACATCACCGAGGGCGTCCCGCGCCACGCCGCCGTCGTCTA CTGCCCCGAC TGCACCTCCTACCTCCAGCCGCC GCGCTCCTGGCTCCGCGCCGGCCCGGAGTCCCCCGAGCTCATGCAGATCCTCCTCCGCCGCCTCAACCGCCCCCTCGCCCGCCTCCGCGTCTCCCTCTCCGCCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCTTCAACGCCGTCGTCCTCGAGCAGACCCACCCCGTCGAGTTCACCGTCCACGATCGCCTCTGCGATGCCTGCGCCCGCGCCCAGTCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCACCTTCCTCTACCTCGAGCAGCTCCTCCTCAAGCACGGCCAGGCCTCCCTCGCCCTCCGCGTCGCCGCCGCCCCCGGCGGCCTCGACTTCTTCTTCGGCTCCCGCTCGCACGCCGCCCGCCTCGTCGACTTCCTCGCCACCGTCGCCCCCGTCCAGACCCAGACCGCCAAGCAGCTCGTCTCCCACGACACCAAGAGCAACGTCTACAACTACAAGCACACCTTCTCCGTCGAGATCTGCCCCATCTGCCGGGAGGACCTCATCGCCCTTAGCCCTCAGGTGTCCCGCGATCTTGGAGGCCTTGGACCTATCGTCCTCTGCATCAAGGTCACCAATGCCATCGCTCTGCTTGACCCCCTCACCCTGCG CTGCACCACCTCGAGGAAAAGAAGTACAGGGTCTACAACTTCAAGGCTGCTCTCACCAGCAAGCAGCTCGTCGAGTACATCGTGCTAGACATCGAGCACGAGTCACCAGAGATTACCATTGACGGATCTCGCTACCAGTTGGCTTATGCCCAGGTCGCCCGGGTCTCCGACTTTGGGAAAAACGACACCATGTTCACCGTGCGGACTCATCTTGGCCACCTGCTGAATCCTGGAGACCTTGCCCTTGGGTATGATCTTTATGGTGCCAACTTGAATGATGATGACATGGACACAGCTATGATGCGCCACAGTCTGCCTGAAGTCATTCTTGTTAAGAAGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCC AATGGAGGAAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGTTTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATA CAAGGATGAGGACTA CAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTGAGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGCCTTCTGGT GA T GGTTGCTGCCAACCGCAGATC ATAGG TCTGAACTGCATCTGTTTAA TCCGTATAAGTTTTGTTCTCCCCTTTA CTTC   TA   TAA  GTTATAAGTTTTGTTGCTAAATTGTTTCAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATC CTGTATCTGGTGTTGCAGCTTGGCTTAAATTATATTTCTCTATTCTTATTGTCTGTGATATGTTGTTTTCTTGCCATAGTGTGGCTGATCACAACATATCTTAAAATAGATGCATTGTTTGATTTCCAAAACATCTAGTTTGGTGTTTAGATTGTGCCAGATTCATATTTTTACTATATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK060642             [                                                  ATTCGATCCAATCCGGCGAGGTACAGGATGCTGCCGGGGTCGGCGGCGCCGGCGGCTGGGAGCGGCATGTTCGTGCCAACGCAGACGGTGGGCACGGTGCTGTGCTGCATCTGCGGCGTGGCGATGCAGCCCAACCCGGCCAACATGTGCGCGCGCTGCATCCGCGCCCGCGTCGACATCACCGAGGGCGTCCCGCGCCACGCCGCCGTCGTCTA CTGCCCCGAC TGCACCTCCTACCTCCAGCCGCC GCGCTCCTGGCTCCGCGCCGGCCCGGAGTCCCCCGAGCTCATGCAGATCCTCCTCCGCCGCCTCAACCGCCCCCTCGCCCGCCTCCGCGTCTCCCTCTCCGCCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCTTCAACGCCGTCGTCCTCGAGCAGACCCACCCCGTCGAGTTCACCGTCCACGATCGCCTCTGCGATGCCTGCGCCCGCGCCCAGTCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCACCTTCCTCTACCTCGAGCAGCTCCTCCTCAAGCACGGCCAGGCCTCCCTCGCCCTCCGCGTCGCCGCCGCCCCCGGCGGCCTCGACTTCTTCTTCGGCTCCCGCTCGCACGCCGCCCGCCTCGTCGACTTCCTCGCCACCGTCGCCCCCGTCCAGACCCAGACCGCCAAGCAGCTCGTCTCCCACGACACCAAGAGCAACGTCTACAACTACAAGCACACCTTCTCCGTCGAGATCTGCCCCATCTGCCGGGAGGACCTCATCGCCCTTAGCCCTCAGGTGTCCCGCGATCTTGGAGGCCTTGGACCTATCGTCCTCTGCATCAAGGTCACCAATGCCATCGCTCTGCTTGACCCCCTCACCCTGCGTGTGCACCACCTCGAGGAAAAGAAGTACAGGGTCTACAACTTCAAGGCTGCTCTCACCAGCAAGCAGCTCGTCGAGTACATCGTGCTAGACATCGAGCACGAGTCACCAGAGATTACCATTGACGGATCTCGCTACCAGTTGGCTTATGCCCAGGTCGCCCGGGTCTCCGACTTTGGGAAAAACGACACCATGTTCACCGTGCGGACTCATCTTGGCCACCTGCTGAATCCTGGAGACCTTGCCCTTGGGTATGATCTTTATGGTGCCAACTTGAATGATGATGACATGGACACAGCTATGATGCGCCACAGTCTGCCTGAAGTCATTCTTGTTAAGAAGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCC AATGGAGGAAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGTTTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATA CAAGGATGAGGACTA CAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTGAGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGTTATGGTGGGATGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C74790               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCCGTCGAGATCTGCCCCATCTGCCGGGAGGACCTCATCGCCCTTAGCCCTCAGGTGTCCCGCGATCTTGGAGGCCTTGGACCTATCGTCCTCTGCATCAAGGTCACCAATGCCATCGCTCTGCTTGACCCCCTCACCCTGCGTGTGCACCACCTCGAGGAAAAGAAGTACAGGGTCTACAACTTCAAGGCTGCTCTCACCAGCAAGCAGCTCGTCGAGTACATCGTGCTAGACATCGAGCACGAGTCACCAGAGATTACCATTGACGGATCTCGCTACCAGTTGGCTTATGCCCAGGTCGCNCGGGTCTCCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK073206             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TACAGGGTCTACAACTTCAAGGCTGCTCTCACCAGCAAGCAGCTCGTCGAGTACATCGTGCTAGACATCGAGCACGAGTCACCAGAGATTACCATTGACGGATCTCGCTACCAGTTGGCTTATGCCCAGGTCGCCCGGGTCTCCGACTTTGGGAAAAACGACACCATGTTCACCGTGCGGACTCATCTTGGCCACCTGCTGAATCCTGGAGACCTTGCCCTTGGGTATGATCTTTATGGTGCCAACTTGAATGATGATGACATGGACACAGCTATGATGCGCCACAGTCTGCCTGAAGTCATTCTTGTTAAGAAGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCC AATGGAGGAAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGTTTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATA CAAGGATGAGGACTA CAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTGAGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGCCTTCTGGT GA T GGTTGCTGCCAACCGCAGATC ATAGG TCTGAACTGCATCTGTTTAA TCCGTATAAGTTTTGTTCTCCCCTTTA CTTC   TA   TAA  GTTATAAGTTTTGTTGCTAAATTGTTTCAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATC CTGTATCTGGTGTTGCAGCTTGGCTTAAATTATATTTCTCTATTCTTATTGTCTGTGATATGTTGTTTTCTTGCCATAGTGTGGCTGATCACAACATATCTTAAAATAGATGCATTGTTTGATTTCCAAAACATCTAGTTTGGTGTTTAGATTGTGCCAGATTCATATTTTTACTATATGTTTTTAGTCCCCATTATGTGGTTTGCAAGCGTGGAATATGATTGTGGATTTATGCTGAGTCATGACTAGAGAATTGTAGGTATGACCTGAAAACGTCTGCCATGTTGAGTGTCACTCCAATAAATTGATTAAAAAACTAATAAAGATAAGTGTAGTATAATATCATACCCAGGAGCCATGATGAGACAATAATGTGCATTTTTAGTGATTGCAATTCAACTGCTGCTGTTTTATCAGGCACTTCATTCAGACTATGCCTACATCGTGCAATAAGAGGTTAGATGTAGAGTTGATGGACAGAACAGATGGTGCTCCACTAATAAGCGATGAGTACTGGTTTGGTAAAACTTTAATAAGTTAAGAATTTTACGGATCTTTTTTTTCTTTTACTTTCACAAGGTGGTGCTGTTCTCAAACCTAATGAC]
[-] EMBL CB637443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGACATGGACACAGCTATGATGCGCCACAGTCTGCCTGAAGTCATTCTTGTTAAGAAGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCC AATGGAGGAAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGTTTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATA CAAGGATGAGGACTA CAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTGAGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGCCTTCTGGT GA T GGTTGCTGCCAACCGCAGATC ATAGG TCTGAACTGCATCTGTTTAA TCCGTATAAGTTTTGTTCTCCCCTTTA CTTC   TA   TAA  GTTATAAGTTTTGTTGCTAAATTGTTTCAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATC CTGTATCTGGTGTTGCAGCTTGGCTTAAATTA ATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI806877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 tcTGTAAAGAAGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCCAAATGGAGGAAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGTTTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATA CAAGGATGAGGACTA CAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTGAGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGCCTTCTGGT GA T GGTTGCTGCCAACCGCAGATC ATAGG TCTGAACTGCATCTGTTTAA TCCGTATAAGTTTTGTTCTCCCCTTTACCTTCCCTTAATTTAAAGGTTATAAGTTTTGTTGCTAAATTGTTTCAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATC CTGTATCTGGTGTTGCAGCTTGGCTTAAATTATAaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI806940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCC AATGGAGGAAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGTTTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATACCAAGGATGAGGACTACCAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTGAGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGCCTTCTGGT GA T GGTTGCTGCCAACCGCAGATC ATAGG TCTGAACTGCATCTGTTTAA TCCGTATAAGTTTTGTTCTCCCCTTTA CTTC   TA   TAA  GTTATAAGTTTTGTTGCTAAATTGTTTCAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATC CTGTATCTGGTGTTGCAGCTTGGCTTAAATTATAaaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU165491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGCCTTCTGGTGGANTGGGTTGCTGCCAACCNCAGATCTATAGGTTCTGAACTGCATCTGTTTAATTCCGTATAAGTTTTGTTCTCCCCTTTA CTTC   TA   TAA  GTTATAAGTTTTGTTGCTAAATTGTTTCAANTTTTGNTGTTTCTCATGATAGATGTTGTATCACCTTATCNCTGTATCTGGTGTTGCAGCTTGGCTTAAATTATATTTCTCTATTCTTATTGTCTGTGATATGTTGTTTTCTTGCCATAGTGTGGCTGATCACAACATATCTTAAAATAGATGCATTGTTTGATTTCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_12333#0
CTATATAAATCTCCATCCCCCCCGCCCCCAGAGATCCCCCAATCCACTCGATTCGATCCA
ATCCGGCGAGGTACAGGATGCTGCCGGGGTCGGCGGCGCCGGCGGCTGGGAGCGGCATGT
TCGTGCCAACGCAGACGGTGGGCACGGTGCTGTGCTGCATCTGCGGCGTGGCGATGCAGC
CCAACCCGGCCAACATGTGCGCGCGCTGCATCCGCGCCCGCGTCGACATCACCGAGGGCG
TCCCGCGCCACGCCGCCGTCGTCTACTGCCCCGACTGCACCTCCTACCTCCAGCCGCCGC
GCTCCTGGCTCCGCGCCGGCCCGGAGTCCCCCGAGCTCATGCAGATCCTCCTCCGCCGCC
TCAACCGCCCCCTCGCCCGCCTCCGCGTCTCCCTCTCCGCCGCCGAGTTCGTCTTCTCCG
AGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCTTCAACGCCG
TCGTCCTCGAGCAGACCCACCCCGTCGAGTTCACCGTCCACGATCGCCTCTGCGATGCCT
GCGCCCGCGCCCAGTCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACG
TCCCGCACCGCCGCACCTTCCTCTACCTCGAGCAGCTCCTCCTCAAGCACGGCCAGGCCT
CCCTCGCCCTCCGCGTCGCCGCCGCCCCCGGCGGCCTCGACTTCTTCTTCGGCTCCCGCT
CGCACGCCGCCCGCCTCGTCGACTTCCTCGCCACCGTCGCCCCCGTCCAGACCCAGACCG
CCAAGCAGCTCGTCTCCCACGACACCAAGAGCAACGTCTACAACTACAAGCACACCTTCT
CCGTCGAGATCTGCCCCATCTGCCGGGAGGACCTCATCGCCCTTAGCCCTCAGGTGTCCC
GCGATCTTGGAGGCCTTGGACCTATCGTCCTCTGCATCAAGGTCACCAATGCCATCGCTC
TGCTTGACCCCCTCACCCTGCGTGTGCACCACCTCGAGGAAAAGAAGTACAGGGTCTACA
ACTTCAAGGCTGCTCTCACCAGCAAGCAGCTCGTCGAGTACATCGTGCTAGACATCGAGC
ACGAGTCACCAGAGATTACCATTGACGGATCTCGCTACCAGTTGGCTTATGCCCAGGTCG
CCCGGGTCTCCGACTTTGGGAAAAACGACACCATGTTCACCGTGCGGACTCATCTTGGCC
ACCTGCTGAATCCTGGAGACCTTGCCCTTGGGTATGATCTTTATGGTGCCAACTTGAATG
ATGATGACATGGACACAGCTATGATGCGCCACAGTCTGCCTGAAGTCATTCTTGTTAAGA
AGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCCAATGGAGG
AAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGT
TTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATACAAGGATG
AGGACTACAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTG
AGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAG
GCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGC
CTTCTGGTGATGGTTGCTGCCAACCGCAGATCATAGGTCTGAACTGCATCTGTTTAATCC
GTATAAGTTTTGTTCTCCCCTTTACTTCTATAAGTTATAAGTTTTGTTGCTAAATTGTTT
CAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATCCTGTATCTGGTGTTGCA
GCTTGGCTTAAATTATATTTCTCTATTCTTATTGTCTGTGATATGTTGTTTTCTTGCCAT
AGTGTGGCTGATCACAACATATCTTAAAATAGATGCATTGTTTGATTTCCAAAACATCTA
GTTTGGTGTTTAGATTGTGCCAGATTCATATTTTTACTATATGTTTTTAGTCCCCATTAT
GTGGTTTGCAAGCGTGGAATATGATTGTGGATTTATGCTGAGTCATGACTAGAGAATTGT
AGGTATGACCTGAAAACGTCTGCCATGTTGAGTGTCACTCCAATAAATTGATTAAAAAAC
TAATAAAGATAAGTGTAGTATAATATCATACCCAGGAGCCATGATGAGACAATAATGTGC
ATTTTTAGTGATTGCAATTCAACTGCTGCTGTTTTATCAGGCACTTCATTCAGACTATGC
CTACATCGTGCAATAAGAGGTTAGATGTAGAGTTGATGGACAGAACAGATGGTGCTCCAC
TAATAAGCGATGAGTACTGGTTTGGTAAAACTTTAATAAGTTAAGAATTTTACGGATCTT
TTTTTTCTTTTACTTTCACAAGGTGGTGCTGTTCTCAAACCTAATGAC

consensusID : consensus_12333#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 511
fasta sequence

                              [GCCCAAGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGANTTTCTCAGGGANTTGGAGCACAATTGTGATATTAGATTCCGGATTGATCTATACANGGATGAGGANTACAGGTNGGAGATGGCATCNACTATNGGTGATGATGTTCCCACTGTGCNGATNGAGGAACTAATTGAGGACTTAANTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGATATGGGGGGANGAGTTAANATGTNAACCTGTGCTGTGCTTCTGCCTTCNGGNGATGGTTGCTGCCAACCGCAGATCATAGGTNNGAACTGCATCTGTTTAATCNGTATAAGTTTTGTTNTCCCCTTNANTTCNATAAGTNATAAGTTTTGTTGCTAAATTGTTTNGACTTTTGCTGTTTNTCATGATAGATGTTATATCACCTTATCCTGTATCTGGTGTTGCAGCTTGGCTTAAANATATTTNTCTANAAAAAACNNANACNAAAAANACG]

[-] EMBL BE228960             [GCCCAAGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGANTTTCTCAGGGANTTGGAGCACAATTGTGATATTAGATTCCGGATTGATCTATACANGGATGAGGANTACAGGTNGGAGATGGCATCNACTATNGGTGATGATGTTCCCACTGTGCNGATNGAGGAACTAATTGAGGACTTAANTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGATATGGGGGGANGAGTTAANATGTNAACCTGTGCTGTGCTTCTGCCTTCNGGNGATGGTTGCTGCCAACCGCAGATCATAGGTNNGAACTGCATCTGTTTAATCNGTATAAGTTTTGTTNTCCCCTTNANTTCNATAAGTNATAAGTTTTGTTGCTAAATTGTTTNGACTTTTGCTGTTTNTCATGATAGATGTTATATCACCTTATCCTGTATCTGGTGTTGCAGCTTGGCTTAAANATATTTNTCTANAAAAAACNNANACNAAAAANACG]




>consensus_12333#1
GCCCAAGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGANTTTCTCAGGGANTTGGAG
CACAATTGTGATATTAGATTCCGGATTGATCTATACANGGATGAGGANTACAGGTNGGAG
ATGGCATCNACTATNGGTGATGATGTTCCCACTGTGCNGATNGAGGAACTAATTGAGGAC
TTAANTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAGGCAACCAACATGCTGAT
ATGGGGGGANGAGTTAANATGTNAACCTGTGCTGTGCTTCTGCCTTCNGGNGATGGTTGC
TGCCAACCGCAGATCATAGGTNNGAACTGCATCTGTTTAATCNGTATAAGTTTTGTTNTC
CCCTTNANTTCNATAAGTNATAAGTTTTGTTGCTAAATTGTTTNGACTTTTGCTGTTTNT
CATGATAGATGTTATATCACCTTATCCTGTATCTGGTGTTGCAGCTTGGCTTAAANATAT
TTNTCTANAAAAAACNNANACNAAAAANACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12333#0      CTATATAAATCTCCATCCCCCCCGCCCCCAGAGATCCCCCAATCCACTCGATTCGATCCA 60
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      ATCCGGCGAGGTACAGGATGCTGCCGGGGTCGGCGGCGCCGGCGGCTGGGAGCGGCATGT 120
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TCGTGCCAACGCAGACGGTGGGCACGGTGCTGTGCTGCATCTGCGGCGTGGCGATGCAGC 180
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      CCAACCCGGCCAACATGTGCGCGCGCTGCATCCGCGCCCGCGTCGACATCACCGAGGGCG 240
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TCCCGCGCCACGCCGCCGTCGTCTACTGCCCCGACTGCACCTCCTACCTCCAGCCGCCGC 300
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      GCTCCTGGCTCCGCGCCGGCCCGGAGTCCCCCGAGCTCATGCAGATCCTCCTCCGCCGCC 360
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TCAACCGCCCCCTCGCCCGCCTCCGCGTCTCCCTCTCCGCCGCCGAGTTCGTCTTCTCCG 420
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      AGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCTTCAACGCCG 480
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TCGTCCTCGAGCAGACCCACCCCGTCGAGTTCACCGTCCACGATCGCCTCTGCGATGCCT 540
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      GCGCCCGCGCCCAGTCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACG 600
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TCCCGCACCGCCGCACCTTCCTCTACCTCGAGCAGCTCCTCCTCAAGCACGGCCAGGCCT 660
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      CCCTCGCCCTCCGCGTCGCCGCCGCCCCCGGCGGCCTCGACTTCTTCTTCGGCTCCCGCT 720
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      CGCACGCCGCCCGCCTCGTCGACTTCCTCGCCACCGTCGCCCCCGTCCAGACCCAGACCG 780
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      CCAAGCAGCTCGTCTCCCACGACACCAAGAGCAACGTCTACAACTACAAGCACACCTTCT 840
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      CCGTCGAGATCTGCCCCATCTGCCGGGAGGACCTCATCGCCCTTAGCCCTCAGGTGTCCC 900
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      GCGATCTTGGAGGCCTTGGACCTATCGTCCTCTGCATCAAGGTCACCAATGCCATCGCTC 960
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TGCTTGACCCCCTCACCCTGCGTGTGCACCACCTCGAGGAAAAGAAGTACAGGGTCTACA 1020
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      ACTTCAAGGCTGCTCTCACCAGCAAGCAGCTCGTCGAGTACATCGTGCTAGACATCGAGC 1080
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      ACGAGTCACCAGAGATTACCATTGACGGATCTCGCTACCAGTTGGCTTATGCCCAGGTCG 1140
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      CCCGGGTCTCCGACTTTGGGAAAAACGACACCATGTTCACCGTGCGGACTCATCTTGGCC 1200
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      ACCTGCTGAATCCTGGAGACCTTGCCCTTGGGTATGATCTTTATGGTGCCAACTTGAATG 1260
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      ATGATGACATGGACACAGCTATGATGCGCCACAGTCTGCCTGAAGTCATTCTTGTTAAGA 1320
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      AGAGCTTCGCCAAGAGGCCACGCACACGCCGATGGAAGCTGAAGAGGCTTCCAATGGAGG 1380
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      AAGATGCTGTAAATAAGGCCAAGGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGAGT 1440
consensus_12333#1      -----------------GCCCAAGGGGAGCTAGAGAAGAGGGCTGATGAGTATGAGGANT 43
                                        *** * *********************************** *

consensus_12333#0      TTCTCAGGGACTTGGAGCACAACTCTGATATTAGATTCCAGATTGATCTATACAAGGATG 1500
consensus_12333#1      TTCTCAGGGANTTGGAGCACAATTGTGATATTAGATTCCGGATTGATCTATACANGGATG 103
                       ********** *********** * ************** ************** *****

consensus_12333#0      AGGACTACAGGTCGGAGATGGCATCTACTATTGGTGATGATGTTCCCACTGTGCCGATTG 1560
consensus_12333#1      AGGANTACAGGTNGGAGATGGCATCNACTATNGGTGATGATGTTCCCACTGTGCNGATNG 163
                       **** ******* ************ ***** ********************** *** *

consensus_12333#0      AGGAACTAATTGAGGACCTAAGTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAG 1620
consensus_12333#1      AGGAACTAATTGAGGACTTAANTCTTGGTGATGATGAGGAGGAGGATGAAGGTGGGGAAG 223
                       ***************** *** **************************************

consensus_12333#0      GCAACCAACATGCTGTTATGGTGGGATGAGTTAATATGTTTACCTGTGCTGTGCTTCTGC 1680
consensus_12333#1      GCAACCAACATGCTGATATGGGGGGANGAGTTAANATGTNAACCTGTGCTGTGCTTCTGC 283
                       *************** ***** **** ******* ****  *******************

consensus_12333#0      CTTCTGGTGATGGTTGCTGCCAACCGCAGATCATAGGTCTGAACTGCATCTGTTTAATCC 1740
consensus_12333#1      CTTCNGGNGATGGTTGCTGCCAACCGCAGATCATAGGTNNGAACTGCATCTGTTTAATCN 343
                       **** ** ******************************  ******************* 

consensus_12333#0      GTATAAGTTTTGTTCTCCCCTTTACTTCTATAAGTTATAAGTTTTGTTGCTAAATTGTTT 1800
consensus_12333#1      GTATAAGTTTTGTTNTCCCCTTNANTTCNATAAGTNATAAGTTTTGTTGCTAAATTGTTT 403
                       ************** ******* * *** ****** ************************

consensus_12333#0      CAACTTTTGCTGTTTCTCATGATAGATGTTGTATCACCTTATCCTGTATCTGGTGTTGCA 1860
consensus_12333#1      NGACTTTTGCTGTTTNTCATGATAGATGTTATATCACCTTATCCTGTATCTGGTGTTGCA 463
                         ************* ************** *****************************

consensus_12333#0      GCTTGGCTTAAATTATATTTCTCTATTCTTATTGTCTGTGATATGTTGTTTTCTTGCCAT 1920
consensus_12333#1      GCTTGGCTTAAAN-ATATTTNTCTANAAAAAACNNANACNAAAAANACG----------- 511
                       ************  ****** ****     *         * *                 

consensus_12333#0      AGTGTGGCTGATCACAACATATCTTAAAATAGATGCATTGTTTGATTTCCAAAACATCTA 1980
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      GTTTGGTGTTTAGATTGTGCCAGATTCATATTTTTACTATATGTTTTTAGTCCCCATTAT 2040
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      GTGGTTTGCAAGCGTGGAATATGATTGTGGATTTATGCTGAGTCATGACTAGAGAATTGT 2100
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      AGGTATGACCTGAAAACGTCTGCCATGTTGAGTGTCACTCCAATAAATTGATTAAAAAAC 2160
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TAATAAAGATAAGTGTAGTATAATATCATACCCAGGAGCCATGATGAGACAATAATGTGC 2220
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      ATTTTTAGTGATTGCAATTCAACTGCTGCTGTTTTATCAGGCACTTCATTCAGACTATGC 2280
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      CTACATCGTGCAATAAGAGGTTAGATGTAGAGTTGATGGACAGAACAGATGGTGCTCCAC 2340
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TAATAAGCGATGAGTACTGGTTTGGTAAAACTTTAATAAGTTAAGAATTTTACGGATCTT 2400
consensus_12333#1      ------------------------------------------------------------
                                                                                   

consensus_12333#0      TTTTTTCTTTTACTTTCACAAGGTGGTGCTGTTCTCAAACCTAATGAC 2448
consensus_12333#1      ------------------------------------------------