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Oryza sativa
cluster # 12346 cluster # 12346       Sequences # 10       consensus # 8


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12346#0 length = 1344 sequences # 3  
consensus_12346#1 length = 760 sequences # 1  
consensus_12346#2 length = 756 sequences # 1  
consensus_12346#3 length = 705 sequences # 1  
consensus_12346#4 length = 672 sequences # 1  
consensus_12346#5 length = 666 sequences # 1  
consensus_12346#6 length = 518 sequences # 1  
consensus_12346#7 length = 462 sequences # 1  

consensusID : consensus_12346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1344
fasta sequence
                              [TTGAAGGAGACGCACATCCATCCCGGCGGAGAGGATGCTGCTGCTGCGCGCCGCCAGGGCGTCGCCGGCGATGGCCGCCGTCGTCAGGTGCAAACCCACCAGGCTGACCCCAATCGCGGGCCTCTCCTCCTCGTCGGGTGGGGCAGGAGGAAGAAGGCCGGGCGGCGGGGCGAGGCCAAGCCCCCACCCCCACCCCCGCCGCAGCTGCGGGGCGGCGAGACGAAGAAGAAGAAGAAGCCAGACGCGAGGACGGCGGCGGAGGCGGCGCAAGGGTTGCAGAGGCATGAGGTCGAGAGGAGGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCGAAGCAGGAGAAGGCGAAGCGCGTGGTGCGGTGGAAGTGCGCGGCCGGGTGCGGCGCGTGCTGCAAGCTGGACAAGGGCCCCGACTTCCCCTCCCCCGAGGAGATCTTCGCCGAGCACCCCGAGGACCTCAAGCTGTACAAGAGCATGATCGGCGCCGATGGATGGTGTATCAACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCAGCACGTTTGACAGGGAAGCTTGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAGTCCGCGGAGCTAACTAACTTTAAACGTGTCATAAGGGAAGAAAGTAAAAAGCATGAAGCTAGCCTGAACCAAGATAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATACTGACCTAGCTAATCTCACTCAGATTT-GATTCTGAATGATTAAATCCCAACCT-AATCCCATTCACGATTTGGTTTTGGTCTTTTGAGGTGATAAAATATGTTCCCTGTATTTTTTTCCCTTTCCTATTACACTTGCAATATGTTCCCTGTATTTGTTTTCCTTTTTTATTCCACTTAAGAAACATTTCTGCTGGAGATATAATCATATAAATATCGCTCTCATTCTACCCAAAAAAAAAA]

[+] EMBL AK099518             [TTGAAGGAGACGCACATCCATCCCGGCGGAGAGGATGCTGCTGCTGCGCGCCGCCAGGGCGTCGCCGGCGATGGCCGCCGTCGTCAGGTGCAAACCCACCAGGCTGACCCCAATCGCGGGCCTCTCCTCCTCGTCGGGTGGGGCAGGAGGAAGAAGGCCGGGCGGCGGGGCGAGGCCAAGCCCCCACCCCCACCCCCGCCGCAGCTGCGGGGCGGCGAGACGAAGAAGAAGAAGAAGCCAGACGCGAGGACGGCGGCGGAGGCGGCGCAAGGGTTGCAGAGGCATGAGGTCGAGAGGAGGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCGAAGCAGGAGAAGGCGAAGCGCGTGGTGCGGTGGAAGTGCGCGGCCGGGTGCGGCGCGTGCTGCAAGCTGGACAAGGGCCCCGACTTCCCCTCCCCCGAGGAGATCTTCGCCGAGCACCCCGAGGACCTCAAGCTGTACAAGAGCATGATCGGCGCCGATGGATGGTGTATCAACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCAGCACGTTTGACAGGGAAGCTTGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAGTCCGCGGAGCTAACTAACTTTAAACGTGTCATAAGGGAAGAAAGTAAAAAGCATGAAGCTAGCCTGAACCAAGATAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATACTGACCTAGCTAATCTCACTCAGATTT GATTCTGAATGATTAAATCCCAACCT AATCCCATTCACGATTTGGTTTTGGTCTTTTGAGGTGATAAAATATGTTCCCTGTATTTTTTTCCCTTTCCTATTACACTTGCAATATGTTCCCTGTATTTGTTTTCCTTTTTTATTCCACTTAAGAAACA                                                        ]
[+] EMBL AU031345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACCATCAAGATGGTGTATGGTGAGGAGTCCGCGGNGCTAACTAACTTTAAACGTGTCATAAGGGAAGAAAGTNAAAAGCATGAAGCTAGCCTGACCCAAGATAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGNCCATATATTTATGTTNCCTGCTGTTTGATGTGCATCAGTNCCTCAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATACTGACCTAGCTAATCTCACTCAGATTT GATTCTGAATGATTAAATCCCAACCT AATCCCATTCACGATTTGGTTTTGGTCTTTTGAGGTGATAAAATATGTTCCCTGTATTTTTTTCCCTTTCCTATTACACTTGCAATATGTTCCCTGTATTTGTTTTCCTTTTTTATTCCACTTAAGAAACATTTCTGCTGGAGATATAATCATATAAATATCGCTCTCATTCTACCCAAAAAAAAAA]
[+] EMBL AU031344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGATGGTGTATGGTGAGGAGTCCGCGGA CTAACTAACTTTAAACGTGTCATAAGGGAAGAAAGTAAAAAGCATGAAGCTAGCCTGAACCAAGATAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATACTGACCTAGCTAATCTCACTCAGATTTGGATTCTGAATGATTAAATCCCAACCTAAATCCCATTCACGATTTGGTTTTGGTCTTTTGAGGNGATAAAATATGTTCCCTGTATTTTTTTCCCTTTCCCATTACACTTGCAATATGTTC                                                                                               ]


>consensus_12346#0 TTGAAGGAGACGCACATCCATCCCGGCGGAGAGGATGCTGCTGCTGCGCGCCGCCAGGGC GTCGCCGGCGATGGCCGCCGTCGTCAGGTGCAAACCCACCAGGCTGACCCCAATCGCGGG CCTCTCCTCCTCGTCGGGTGGGGCAGGAGGAAGAAGGCCGGGCGGCGGGGCGAGGCCAAG CCCCCACCCCCACCCCCGCCGCAGCTGCGGGGCGGCGAGACGAAGAAGAAGAAGAAGCCA GACGCGAGGACGGCGGCGGAGGCGGCGCAAGGGTTGCAGAGGCATGAGGTCGAGAGGAGG AAGAAGCCGCCGCCGCCGCCGCCGCCGCCGAAGCAGGAGAAGGCGAAGCGCGTGGTGCGG TGGAAGTGCGCGGCCGGGTGCGGCGCGTGCTGCAAGCTGGACAAGGGCCCCGACTTCCCC TCCCCCGAGGAGATCTTCGCCGAGCACCCCGAGGACCTCAAGCTGTACAAGAGCATGATC GGCGCCGATGGATGGTGTATCAACTACGACAAGTCCACTCGCACCTGCAACATCTACGAA GAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCA AGCCGACCCAGCACGTTTGACAGGGAAGCTTGCAGTGCTTGTGTGGATACCATCAAGATG GTGTATGGTGAGGAGTCCGCGGAGCTAACTAACTTTAAACGTGTCATAAGGGAAGAAAGT AAAAAGCATGAAGCTAGCCTGAACCAAGATAAATTGTTGGATACATAGCTCCTGGTAAAT TCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTG ATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTT TTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAA GGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTT TCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAA TGCCTTCATCCAATTCTGATGATACTGACCTAGCTAATCTCACTCAGATTTGATTCTGAA TGATTAAATCCCAACCTAATCCCATTCACGATTTGGTTTTGGTCTTTTGAGGTGATAAAA TATGTTCCCTGTATTTTTTTCCCTTTCCTATTACACTTGCAATATGTTCCCTGTATTTGT TTTCCTTTTTTATTCCACTTAAGAAACATTTCTGCTGGAGATATAATCATATAAATATCG CTCTCATTCTACCCAAAAAAAAAA



consensusID : consensus_12346#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 760
fasta sequence
                              [TGTATCAACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGGTAGTCACAAACTCAACAGGACGAATCCTGTATGACCCTGGTGTGTAATGGGCCATTTCACCTGACACTGTTCTGGTTGATGCGTCGCGAAACTTGCGATCGTAGAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCAGCACGTTTGACAGGGAAGCTTGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAGTCCGCGGAGCTAACTAACTTTAAACGTGTCATAAGGGAAGAAAGTAAAAATCATGAAGCTAGCCTGAACCAAGATAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATACTGACCTAGCTAATCTCACTCAGATTTGATTCTGAATGAATGAATC]

[-] EMBL CB643174             [TGTATCAACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGGTAGTCACAAACTCAACAGGACGAATCCTGTATGACCCTGGTGTGTAATGGGCCATTTCACCTGACACTGTTCTGGTTGATGCGTCGCGAAACTTGCGATCGTAGAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCAGCACGTTTGACAGGGAAGCTTGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAGTCCGCGGAGCTAACTAACTTTAAACGTGTCATAAGGGAAGAAAGTAAAAATCATGAAGCTAGCCTGAACCAAGATAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATACTGACCTAGCTAATCTCACTCAGATTTGATTCTGAATGAATGAATC]


>consensus_12346#1 TGTATCAACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGGTAGTCACAAACTC AACAGGACGAATCCTGTATGACCCTGGTGTGTAATGGGCCATTTCACCTGACACTGTTCT GGTTGATGCGTCGCGAAACTTGCGATCGTAGAGAGGCCTGTCTTCTGCAGGGTGGAACCG AAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCAGCACGTTTGACAGGGAAGCT TGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAGTCCGCGGAGCTAACT AACTTTAAACGTGTCATAAGGGAAGAAAGTAAAAATCATGAAGCTAGCCTGAACCAAGAT AAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAA GGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCTCAAATGGTTAAACG TGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGA GGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCT TGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAA AGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATACTGACC TAGCTAATCTCACTCAGATTTGATTCTGAATGAATGAATC



consensusID : consensus_12346#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 756
fasta sequence
                              [ACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCGGCACGTTCGACAGGGAAGCTTGCAGGTTTGCTTCTCCTGTCCTGCCTTGTGTATCGCTGGGTTGGTTCGTCAAAGGTGGTGATTTCGGGTTTGTTTACTTGTTCGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAATCTGCGGAGCTAACAAACTTTAAACGTGTCATAAGGGAAGAAAGTAAGAAGCATGAAGCTAGCCTGAACCAAGAAAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGAGGGAGTTTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTTGGTGGTATTTAATTTTTTTCCCCGNTATTGGTAACAATTGNTCGCTAAAGCATAGAGCAATAGTTAGCTTGGGTTTGAATGCCTTCATCCAATTCTGA]

[+] EMBL CA767324             [ACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCGGCACGTTCGACAGGGAAGCTTGCAGGTTTGCTTCTCCTGTCCTGCCTTGTGTATCGCTGGGTTGGTTCGTCAAAGGTGGTGATTTCGGGTTTGTTTACTTGTTCGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAATCTGCGGAGCTAACAAACTTTAAACGTGTCATAAGGGAAGAAAGTAAGAAGCATGAAGCTAGCCTGAACCAAGAAAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGAGGGAGTTTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTTGGTGGTATTTAATTTTTTTCCCCGNTATTGGTAACAATTGNTCGCTAAAGCATAGAGCAATAGTTAGCTTGGGTTTGAATGCCTTCATCCAATTCTGA]


>consensus_12346#2 ACTACGACAAGTCCACTCGCACCTGCAACATCTACGAAGAGAGGCCTGTCTTCTGCAGGG TGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGCCGACCCGGCACGTTCGACA GGGAAGCTTGCAGGTTTGCTTCTCCTGTCCTGCCTTGTGTATCGCTGGGTTGGTTCGTCA AAGGTGGTGATTTCGGGTTTGTTTACTTGTTCGCAGTGCTTGTGTGGATACCATCAAGAT GGTGTATGGTGAGGAATCTGCGGAGCTAACAAACTTTAAACGTGTCATAAGGGAAGAAAG TAAGAAGCATGAAGCTAGCCTGAACCAAGAAAAATTGTTGGATACATAGCTCCTGGTAAA TTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTT GATGTGCATCAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGT TTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAG AAGAGGGAGTTTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTT GCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTTGG TGGTATTTAATTTTTTTCCCCGNTATTGGTAACAATTGNTCGCTAAAGCATAGAGCAATA GTTAGCTTGGGTTTGAATGCCTTCATCCAATTCTGA



consensusID : consensus_12346#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 705
fasta sequence
                              [CTTCCCTTCTTCAGTAGGCTGGGAGGCCTGCGGGTGGGGCGGCGGCGGGCAAAGCAGGCAGGGGACAACGCGGTGGTGGGTGGCAGGCGAAAGGCGAAGCAGACAGGGGGCGGGGCGCATCACCTGCGGCCGCGCGACAACCGAGGCCCGCTCCAGCACGGCCGCTCCCTCTCCACGGAGGCCATCCTTGCCGTGCAATCCCTCAAGCGCATCACCTCTTTTGACCGCTCCCCAGCCGCCGCCGTGCCCTCGACTTCCCTCGGCGCCTCCTCAAGAGCGACCTCCTCGCCGCCATGGCTGAGCTCCAGCGTCAAGGCTGTTGGTCCCTCGCCCTCTCCCCACTCCACGTCGCCCGCATCGAGCCTTGGTACTACCCCAACCCAGCTCTCTACGCCACGTTCGTGTCCTCCTCGCCAGTCACTGAGGATGGCACCGCCGCCGCCATGGACGTGCTCGTGGAGGCGTTCCTAGAGGAGGAGCGAGGCGGCGGGTTCGTGGAGGGGGAGGAGGACGTGTACAAGCTGATGCGGCTTGTGCGCACGCTGGTGGCGAAGGAGAGGGCGCGCGCGGCGTGGAGGGTGTACTAGCTGGCGCGTGTGGGGACTACAGACAGACTTAGATGTAAAGCTGAGGGACTTCAGATGAACTTATTCCGACCGGGAATGCCTGGGCCCAATCGGACCATATACTCCGGCACTGGGCCCA]

[+] EMBL CB643173             [CTTCCCTTCTTCAGTAGGCTGGGAGGCCTGCGGGTGGGGCGGCGGCGGGCAAAGCAGGCAGGGGACAACGCGGTGGTGGGTGGCAGGCGAAAGGCGAAGCAGACAGGGGGCGGGGCGCATCACCTGCGGCCGCGCGACAACCGAGGCCCGCTCCAGCACGGCCGCTCCCTCTCCACGGAGGCCATCCTTGCCGTGCAATCCCTCAAGCGCATCACCTCTTTTGACCGCTCCCCAGCCGCCGCCGTGCCCTCGACTTCCCTCGGCGCCTCCTCAAGAGCGACCTCCTCGCCGCCATGGCTGAGCTCCAGCGTCAAGGCTGTTGGTCCCTCGCCCTCTCCCCACTCCACGTCGCCCGCATCGAGCCTTGGTACTACCCCAACCCAGCTCTCTACGCCACGTTCGTGTCCTCCTCGCCAGTCACTGAGGATGGCACCGCCGCCGCCATGGACGTGCTCGTGGAGGCGTTCCTAGAGGAGGAGCGAGGCGGCGGGTTCGTGGAGGGGGAGGAGGACGTGTACAAGCTGATGCGGCTTGTGCGCACGCTGGTGGCGAAGGAGAGGGCGCGCGCGGCGTGGAGGGTGTACTAGCTGGCGCGTGTGGGGACTACAGACAGACTTAGATGTAAAGCTGAGGGACTTCAGATGAACTTATTCCGACCGGGAATGCCTGGGCCCAATCGGACCATATACTCCGGCACTGGGCCCA]


>consensus_12346#3 CTTCCCTTCTTCAGTAGGCTGGGAGGCCTGCGGGTGGGGCGGCGGCGGGCAAAGCAGGCA GGGGACAACGCGGTGGTGGGTGGCAGGCGAAAGGCGAAGCAGACAGGGGGCGGGGCGCAT CACCTGCGGCCGCGCGACAACCGAGGCCCGCTCCAGCACGGCCGCTCCCTCTCCACGGAG GCCATCCTTGCCGTGCAATCCCTCAAGCGCATCACCTCTTTTGACCGCTCCCCAGCCGCC GCCGTGCCCTCGACTTCCCTCGGCGCCTCCTCAAGAGCGACCTCCTCGCCGCCATGGCTG AGCTCCAGCGTCAAGGCTGTTGGTCCCTCGCCCTCTCCCCACTCCACGTCGCCCGCATCG AGCCTTGGTACTACCCCAACCCAGCTCTCTACGCCACGTTCGTGTCCTCCTCGCCAGTCA CTGAGGATGGCACCGCCGCCGCCATGGACGTGCTCGTGGAGGCGTTCCTAGAGGAGGAGC GAGGCGGCGGGTTCGTGGAGGGGGAGGAGGACGTGTACAAGCTGATGCGGCTTGTGCGCA CGCTGGTGGCGAAGGAGAGGGCGCGCGCGGCGTGGAGGGTGTACTAGCTGGCGCGTGTGG GGACTACAGACAGACTTAGATGTAAAGCTGAGGGACTTCAGATGAACTTATTCCGACCGG GAATGCCTGGGCCCAATCGGACCATATACTCCGGCACTGGGCCCA



consensusID : consensus_12346#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence
                              [TCCGCTCTCTTCTCCGCACCTCATGGCGTCCCTCCTCTCCCTCCCGCGTCTCACTCTCACCCCGACCCCACGCGCGAACCCCGGCCGCCGCAGCGCCCGCCCCACGCCGGCGAGCATCACCTGCGGCCCGCGCGACAACCGCGGCCCGCTCCAGCGCGGCCGCTCCCTCTCCACGGAGGCCATCCTCGCCGTGCAATCCCTCAAGCGCCTCACCTCCTCCGACCGCTCCCCGGCCGCCGCCGCCGCCGCGGCCTCGACCTCCCTCGGCCGCCTCCTCAAGGGCGACCTCCTCGCCGCCATGGCCGAGCTCCAGCGCCAGGGCCACTGGTCCCTCGCCCTCGCCGCGCTCCACGTCGCCCGCGCCGAGCCCTGGTACCGCCCCGACCCGGCCCTCTACGCCACGTTCGTCTCCTCCTCGCCGGCCACCGAGGACGGCGCCGCCGCCGTGGACGCGCTCGTGGAGGCGTTCCTGGAGGAGAAGGAGCGGGGCGGCGGGTTCGTGGATGGGGAGGAGGACGTGTACAAGCTGACGCGGCTGGTGCGCGCGCTGGTGGCGAAGGGGAGGGCGCGCGCGGCGTGGAGGGTGTACGAGGCGGCGGTGAGGATGGGAGGCTGCGAGGTGGACGAGTACATGTACAGGGTGATGGCGAGGGGGATGAAGCGGCTGGGCTT]

[+] EMBL AK109233             [TCCGCTCTCTTCTCCGCACCTCATGGCGTCCCTCCTCTCCCTCCCGCGTCTCACTCTCACCCCGACCCCACGCGCGAACCCCGGCCGCCGCAGCGCCCGCCCCACGCCGGCGAGCATCACCTGCGGCCCGCGCGACAACCGCGGCCCGCTCCAGCGCGGCCGCTCCCTCTCCACGGAGGCCATCCTCGCCGTGCAATCCCTCAAGCGCCTCACCTCCTCCGACCGCTCCCCGGCCGCCGCCGCCGCCGCGGCCTCGACCTCCCTCGGCCGCCTCCTCAAGGGCGACCTCCTCGCCGCCATGGCCGAGCTCCAGCGCCAGGGCCACTGGTCCCTCGCCCTCGCCGCGCTCCACGTCGCCCGCGCCGAGCCCTGGTACCGCCCCGACCCGGCCCTCTACGCCACGTTCGTCTCCTCCTCGCCGGCCACCGAGGACGGCGCCGCCGCCGTGGACGCGCTCGTGGAGGCGTTCCTGGAGGAGAAGGAGCGGGGCGGCGGGTTCGTGGATGGGGAGGAGGACGTGTACAAGCTGACGCGGCTGGTGCGCGCGCTGGTGGCGAAGGGGAGGGCGCGCGCGGCGTGGAGGGTGTACGAGGCGGCGGTGAGGATGGGAGGCTGCGAGGTGGACGAGTACATGTACAGGGTGATGGCGAGGGGGATGAAGCGGCTGGGCTT]


>consensus_12346#4 TCCGCTCTCTTCTCCGCACCTCATGGCGTCCCTCCTCTCCCTCCCGCGTCTCACTCTCAC CCCGACCCCACGCGCGAACCCCGGCCGCCGCAGCGCCCGCCCCACGCCGGCGAGCATCAC CTGCGGCCCGCGCGACAACCGCGGCCCGCTCCAGCGCGGCCGCTCCCTCTCCACGGAGGC CATCCTCGCCGTGCAATCCCTCAAGCGCCTCACCTCCTCCGACCGCTCCCCGGCCGCCGC CGCCGCCGCGGCCTCGACCTCCCTCGGCCGCCTCCTCAAGGGCGACCTCCTCGCCGCCAT GGCCGAGCTCCAGCGCCAGGGCCACTGGTCCCTCGCCCTCGCCGCGCTCCACGTCGCCCG CGCCGAGCCCTGGTACCGCCCCGACCCGGCCCTCTACGCCACGTTCGTCTCCTCCTCGCC GGCCACCGAGGACGGCGCCGCCGCCGTGGACGCGCTCGTGGAGGCGTTCCTGGAGGAGAA GGAGCGGGGCGGCGGGTTCGTGGATGGGGAGGAGGACGTGTACAAGCTGACGCGGCTGGT GCGCGCGCTGGTGGCGAAGGGGAGGGCGCGCGCGGCGTGGAGGGTGTACGAGGCGGCGGT GAGGATGGGAGGCTGCGAGGTGGACGAGTACATGTACAGGGTGATGGCGAGGGGGATGAA GCGGCTGGGCTT



consensusID : consensus_12346#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence
                              [CGNGGACGAGACAAGGGGAGCTTGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAATCTGCGGAGCTAACAAACTTTAAACGTGTCATAAGGGAAGAAAGTAAGAAGCATGAAGCTAGCCTGAACCAAGAAAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTGTCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTCCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATCCTGACCTAGCTAATCTCACTCAGATTTGATTCTGAATGATTAAATCCCAACCTAATCCTATTCACGATTTGGTTTTGGTCTTTTGANGTGATAAAATATGT]

[+] EMBL CB096992             [CGNGGACGAGACAAGGGGAGCTTGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGGTGAGGAATCTGCGGAGCTAACAAACTTTAAACGTGTCATAAGGGAAGAAAGTAAGAAGCATGAAGCTAGCCTGAACCAAGAAAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGACATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTGTCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTCCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTTTTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGAATGCCTTCATCCAATTCTGATGATCCTGACCTAGCTAATCTCACTCAGATTTGATTCTGAATGATTAAATCCCAACCTAATCCTATTCACGATTTGGTTTTGGTCTTTTGANGTGATAAAATATGT]


>consensus_12346#5 CGNGGACGAGACAAGGGGAGCTTGCAGTGCTTGTGTGGATACCATCAAGATGGTGTATGG TGAGGAATCTGCGGAGCTAACAAACTTTAAACGTGTCATAAGGGAAGAAAGTAAGAAGCA TGAAGCTAGCCTGAACCAAGAAAAATTGTTGGATACATAGCTCCTGGTAAATTCAGAAGA CATCAATGGCCTATAATGTAAAGGTCCATATATTTATGTTTCCTGCTGTTTGATGTGCAT CAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATGTTGAGGGAGTTTTACCTGA GATGTTGCTGTCACGGTTCGGAGGAAATGAATTGACACTTGCAAGTTAAGAAGAGGGAGT TTTACCTGAGATGTTGCTATCACGGTCCGGAGGAAATGAATTGACACTTGCAAGTTAAGA AGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGTGAGGGTTGGTGGTATTATTTT TTCCCCGTTATTGTTAACAATTGTTTGCTAAAGCATAGAGCAATAGTTAGCTTGGTTTGA ATGCCTTCATCCAATTCTGATGATCCTGACCTAGCTAATCTCACTCAGATTTGATTCTGA ATGATTAAATCCCAACCTAATCCTATTCACGATTTGGTTTTGGTCTTTTGANGTGATAAA ATATGT



consensusID : consensus_12346#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 518
fasta sequence
                              [ANACCATCAAAATGGGTATGGTTGAGGAGTCCCCGGACCTNACTTAACTTTAACGTGTCATAAGGGAAGAAAGTTATAAGCATGAAGCTACCTGAACCACAGATAAATTGTTGGATACATAGCTCCTGGGNAAATTCAGAAGACATCCATGGCCTATAATGTAAAGGNCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCCGTCCTCCAATGGTTAAACGTGGGACACGCCCCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTCACAGTTATAGAAGCCCTCGGATATGCTCAATTTATAANCTTTTGAATGANGTTGTGGTATTATTTTTTCCCCCTTATTGTTAACCAATTGTGTTGCTAAACCATAGACCCATATTACCTTGGTTTGAAACCCTCAACCACATTCTGATGATCTGACCTACCTAATCTTCNCTCCAAATTTGATTCTGAATGATTAAATCCCCACCTAATCCCCAC]

[+] EMBL BI806044             [ANACCATCAAAATGGGTATGGTTGAGGAGTCCCCGGACCTNACTTAACTTTAACGTGTCATAAGGGAAGAAAGTTATAAGCATGAAGCTACCTGAACCACAGATAAATTGTTGGATACATAGCTCCTGGGNAAATTCAGAAGACATCCATGGCCTATAATGTAAAGGNCCATATATTTATGTTTCCTGCTGTTTGATGTGCATCCGTCCTCCAATGGTTAAACGTGGGACACGCCCCGAGATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTTCACAGTTATAGAAGCCCTCGGATATGCTCAATTTATAANCTTTTGAATGANGTTGTGGTATTATTTTTTCCCCCTTATTGTTAACCAATTGTGTTGCTAAACCATAGACCCATATTACCTTGGTTTGAAACCCTCAACCACATTCTGATGATCTGACCTACCTAATCTTCNCTCCAAATTTGATTCTGAATGATTAAATCCCCACCTAATCCCCAC]


>consensus_12346#6 ANACCATCAAAATGGGTATGGTTGAGGAGTCCCCGGACCTNACTTAACTTTAACGTGTCA TAAGGGAAGAAAGTTATAAGCATGAAGCTACCTGAACCACAGATAAATTGTTGGATACAT AGCTCCTGGGNAAATTCAGAAGACATCCATGGCCTATAATGTAAAGGNCCATATATTTAT GTTTCCTGCTGTTTGATGTGCATCCGTCCTCCAATGGTTAAACGTGGGACACGCCCCGAG ATGTTGAGGGAGTTTTACCTGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACAC TTCACAGTTATAGAAGCCCTCGGATATGCTCAATTTATAANCTTTTGAATGANGTTGTGG TATTATTTTTTCCCCCTTATTGTTAACCAATTGTGTTGCTAAACCATAGACCCATATTAC CTTGGTTTGAAACCCTCAACCACATTCTGATGATCTGACCTACCTAATCTTCNCTCCAAA TTTGATTCTGAATGATTAAATCCCCACCTAATCCCCAC



consensusID : consensus_12346#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 462
fasta sequence
                              [TAGATGCCATTAAGAGGGACTTCAGATGAACTTATTCCGACCGGGAATGCCTGGGCCCAATCGGACCATATACTCCGGCACCGGGCCCAATTGGGCCTGCAAGAAACAGCCCGTCGTCACCTGTGGTGGCTTGCTTTTCTTGCCATTGGAAGGGTGGAGGAGGAGGGGATAAGCGAGGTTGAAGGAGACGCACATCCATCCCGGCGGAGAGGATGCTGCTGCTGCGCGCCGCCAGGGCGTCGCCGGCGATGGCCGCCGTCGTCAGGTGCAAACCCACCAGGCTGACCCCAATCGCGGGCCTCTCCTCCTCGTCGGGTGGGGGCAGGAGGAAGAAGGCCGGGCGGCGGGGCGAGGCCAAGCCCCCACCCCCACCCCCGCCGCAGCTGCGGGGCGGCGAGACGAAGAAGAAGAAGAAGCCAGACGCGAGGACGGCGGTTATGACACNTTTAAAGTTACTTAGCT]

[+] EMBL CB652101             [TAGATGCCATTAAGAGGGACTTCAGATGAACTTATTCCGACCGGGAATGCCTGGGCCCAATCGGACCATATACTCCGGCACCGGGCCCAATTGGGCCTGCAAGAAACAGCCCGTCGTCACCTGTGGTGGCTTGCTTTTCTTGCCATTGGAAGGGTGGAGGAGGAGGGGATAAGCGAGGTTGAAGGAGACGCACATCCATCCCGGCGGAGAGGATGCTGCTGCTGCGCGCCGCCAGGGCGTCGCCGGCGATGGCCGCCGTCGTCAGGTGCAAACCCACCAGGCTGACCCCAATCGCGGGCCTCTCCTCCTCGTCGGGTGGGGGCAGGAGGAAGAAGGCCGGGCGGCGGGGCGAGGCCAAGCCCCCACCCCCACCCCCGCCGCAGCTGCGGGGCGGCGAGACGAAGAAGAAGAAGAAGCCAGACGCGAGGACGGCGGTTATGACACNTTTAAAGTTACTTAGCT]


>consensus_12346#7 TAGATGCCATTAAGAGGGACTTCAGATGAACTTATTCCGACCGGGAATGCCTGGGCCCAA TCGGACCATATACTCCGGCACCGGGCCCAATTGGGCCTGCAAGAAACAGCCCGTCGTCAC CTGTGGTGGCTTGCTTTTCTTGCCATTGGAAGGGTGGAGGAGGAGGGGATAAGCGAGGTT GAAGGAGACGCACATCCATCCCGGCGGAGAGGATGCTGCTGCTGCGCGCCGCCAGGGCGT CGCCGGCGATGGCCGCCGTCGTCAGGTGCAAACCCACCAGGCTGACCCCAATCGCGGGCC TCTCCTCCTCGTCGGGTGGGGGCAGGAGGAAGAAGGCCGGGCGGCGGGGCGAGGCCAAGC CCCCACCCCCACCCCCGCCGCAGCTGCGGGGCGGCGAGACGAAGAAGAAGAAGAAGCCAG ACGCGAGGACGGCGGTTATGACACNTTTAAAGTTACTTAGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      TTGAAGGAGACGCACATCCATCCCGGCGGAGAGGATGCTGCTGCTGCGCGCCGCCAGGGC 60
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      GTCGCCGGCGATGGCCGCCGTCGTCAGGTGCAAACCCACCAGGCTGACCCCAATCGCGGG 120
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      CCTCTCCTCCTCGTCGGGTGGGGCAGGAGGAAGAAGGCCGGGCGGCGGGGCGAGGCCAAG 180
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      CCCCCACCCCCACCCCCGCCGCAGCTGCGGGGCGGCGAGACGAAGAAGAAGAAGAAGCCA 240
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      GACGCGAGGACGGCGGCGGAGGCGGCGCAAGGGTTGCAGAGGCATGAGGTCGAGAGGAGG 300
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      AAGAAGCCGCCGCCGCCGCCGCCGCCGCCGAAGCAGGAGAAGGCGAAGCGCGTGGTGCGG 360
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ----------------------------------------------------------AC 2
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------TGTATCAACTACGACAAGTCCACTCGCACC 30
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      TGGAAGTGCGCGGCCGGGTGCGGCGCGTGCTGCAAGCTGGACAAGGGCCCCGACTTCCCC 420
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      TACGACAAGTCCACTCGCACCTGCAACATCTACGAAGAGAGGCCTGTCTTCTGCAGGGTG 62
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      TGCAACATCTACGAAGGTAGTCACAAACTCAACAGGACGAATCCTGTATGACCCTGGTGT 90
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      TCCCCCGAGGAGATCTTCGCCGAGCACCCCGAGGACCTCAAGCTGTACAAGAGCATGATC 480
consensus_12346#3      --------------------------------------------CTTCCCTTCTTCAGTA 16
consensus_12346#4      --------------------------------------------TCCGCTCTCTTCTCCG 16
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      GAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCAAGC-CGACCCGGCACGTTCGACAG 121
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      GTAATGGGCCATTTCACCTGACACTGTTCTGGTTGATGCGTCGCGAAACTTGCGATCGTA 150
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      GGCGCCGATGGATGGTGTATCAACTACGACAAGTCCACTCGCACCTGCAACATCTACGAA 540
consensus_12346#3      GGCTGGGAGGCCTGCGGGTGGGGCGGCGGCGGGCAAAGCAGGCAGGGGACAACGCGGTGG 76
consensus_12346#4      CACCTCATGGCGTCCCTCC---TCTCCCTCCCGCGTCTCACTCTCACCCCGACCCCACGC 73
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      GGAAGCTTGCAGGTTTGCTTCTCCTGTCCTGCCTTGTGTATCGCTGGGTTGGTTCGTCAA 181
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      GAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCA 210
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      GAGAGGCCTGTCTTCTGCAGGGTGGAACCGAAGGTTTTCGAGGAGTACTTCGGCGTGCCA 600
consensus_12346#3      TGGGTGGCAGGCGAAAGGCGAAGCAGACAGGGGGCGGGGCGCATCACCTGCGGCC-GCGC 135
consensus_12346#4      GCGAACCCCGGCCGCCGCAGCGCCCGCCCCACGCCGGCGAGCATCACCTGCGGCCCGCGC 133
consensus_12346#7      ----------------------TAGATGCCATTAAGAGGGACTTCAGATGAACTTATTCC 38
                                                                                   

consensus_12346#2      AGGTGGTGATTTCGGGTTTGTTTACTTGTTCGCAGTGCTTGTGTGGATACCATCAAGATG 241
consensus_12346#5      ------CGNGGACGAGACAAGGGGA--GCTTGCAGTGCTTGTGTGGATACCATCAAGATG 52
consensus_12346#1      AGCCGACCCAGCACGTTTGACAGGGAAGCTTGCAGTGCTTGTGTGGATACCATCAAGATG 270
consensus_12346#6      ----------------------------------------------ANACCATCAAAATG 14
consensus_12346#0      AGCCGACCCAGCACGTTTGACAGGGAAGCTTGCAGTGCTTGTGTGGATACCATCAAGATG 660
consensus_12346#3      GACAACCGAGGCCCGC-TCCAGCACGGCCGCTCCCT-CTC-CACGGAGGCCATCCTTGCC 192
consensus_12346#4      GACAACCGCGGCCCGC-TCCAGCGCGGCCGCTCCCT-CTC-CACGGAGGCCATCCTCGCC 190
consensus_12346#7      GACCGGGAATGCCTGGGCCCAATCGGACCATATACT-CCGGCACCGGGCCCAATTGGGCC 97
                                                                        ***        

consensus_12346#2      GTGTATGGT----GAGGAATCTGCGGAGCTAACAAACTTTAAACGT-GTCATAAGGGAAG 296
consensus_12346#5      GTGTATGGT----GAGGAATCTGCGGAGCTAACAAACTTTAAACGT-GTCATAAGGGAAG 107
consensus_12346#1      GTGTATGGT----GAGGAGTCCGCGGAGCTAACTAACTTTAAACGT-GTCATAAGGGAAG 325
consensus_12346#6      G-GTATGGTT---GAGGAGTCCCCGGACCTNACTTAACTTTAACGT-GTCATAAGGGAAG 69
consensus_12346#0      GTGTATGGT----GAGGAGTCCGCGGAGCTAACTAACTTTAAACGT-GTCATAAGGGAAG 715
consensus_12346#3      GTGCAATCCCTCAAGCGCATCACCTCTTTTGACCGCTCCCCAGCC--GCCGCCGT----- 245
consensus_12346#4      GTGCAATCCCTCAAGCGCCTCACCTCCTCCGACCGCTCCCCGGCC--GCCGCCGCCGCCG 248
consensus_12346#7      -TGCAAGAAAC--AGCCCGTCGTCACCTGTGGTGGCTTGCTTTTCTTGCCATTGGAAGGG 154
                         * *              **  *                       * *          

consensus_12346#2      -AAAGTAAGAAGCATGAAGCTAGCCTGAACCA-AGAAAAATTGTTGGATACATAGCTCCT 354
consensus_12346#5      -AAAGTAAGAAGCATGAAGCTAGCCTGAACCA-AGAAAAATTGTTGGATACATAGCTCCT 165
consensus_12346#1      -AAAGTAAAAATCATGAAGCTAGCCTGAACCA-AGATAAATTGTTGGATACATAGCTCCT 383
consensus_12346#6      -AAAGTTATAAGCATGAAGCTA-CCTGAACCACAGATAAATTGTTGGATACATAGCTCCT 127
consensus_12346#0      -AAAGTAAAAAGCATGAAGCTAGCCTGAACCA-AGATAAATTGTTGGATACATAGCTCCT 773
consensus_12346#3      -GCCCTCGACTTCCCTCGGC-GCCTCCTCAAGAGCG-ACCTCCTCGCCGCCATGGCTGA- 301
consensus_12346#4      CGGCCTCGACCTCCCTCGGCCGCCTCCTCAAGGGCG-ACCTCCTCGCCGCCATGGCCGA- 306
consensus_12346#7      TGGAGGAGGAGGGGATAAGCGAGGTTGAAGGAGACGCACATCCATCCCGGCGGAGAGGAT 214
                                         **                 *  *         *   *     

consensus_12346#2      GG-TAAATTCAGAAGACATCAATGGCCTATAAT-GTAAAGGTCCATATATTTATGTTTCC 412
consensus_12346#5      GG-TAAATTCAGAAGACATCAATGGCCTATAAT-GTAAAGGTCCATATATTTATGTTTCC 223
consensus_12346#1      GG-TAAATTCAGAAGACATCAATGGCCTATAAT-GTAAAGGTCCATATATTTATGTTTCC 441
consensus_12346#6      GGGNAAATTCAGAAGACATCCATGGCCTATAAT-GTAAAGGNCCATATATTTATGTTTCC 186
consensus_12346#0      GG-TAAATTCAGAAGACATCAATGGCCTATAAT-GTAAAGGTCCATATATTTATGTTTCC 831
consensus_12346#3      GCTCCAGCGTCAAGGCTGTTGGTCCCTCGCCCTCTCCCCACTCCACGTCGCCCGCATCGA 361
consensus_12346#4      GCTCCAGCGCCAGGGCCACTGGTCCCTCGCCCTCGCCGCGCTCCACGTCGCCCGCGCCGA 366
consensus_12346#7      GCTGCTGCTGC-GCGCCGCCAGGGCGTCGCCG--GCGATGGCCGCCGTCGTCAGGTGCAA 271
                       *             *                           *    *            

consensus_12346#2      TGCT--GTTTGATGTGCATCAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATG 470
consensus_12346#5      TGCT--GTTTGATGTGCATCAGTGCCACAAATGGTTAAACGTGGAACACGCACCGAGATG 281
consensus_12346#1      TGCT--GTTTGATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATG 499
consensus_12346#6      TGCT--GTTTGATGTGCATCCGT-CCTCCAATGGTTAAACGTGGGACACGCCCCGAGATG 243
consensus_12346#0      TGCT--GTTTGATGTGCATCAGTGCCTCAAATGGTTAAACGTGGAACACGCACCGAGATG 889
consensus_12346#3      GCCTTGGTACTACCCCAACCCAGCTCTCTACGCCACGTTCGTGTC-CTCCTCGCCAGTCA 420
consensus_12346#4      GCCCTGGTACCGCCCCGACCCGGCCCTCTACGCCACGTTCGTCTC-CTCCTCGCCGGCCA 425
consensus_12346#7      ACCC----ACCAGGCTGACCCCAATCGCGGGCCTCTCCTCCTCGT-CGGGTGGGGGCAGG 326
                         *              * *     * *           * *    *             

consensus_12346#2      TTGAGGGAGTTTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGAATTGACACTT 530
consensus_12346#5      TTGAGGGAGTTTTACCTG-AGATGTTGCTGTCACGGTTCGGAGGAAATGAATTGACACTT 340
consensus_12346#1      TTGAGGGAGTTTTACCTG------------------------------------------ 517
consensus_12346#6      TTGAGGGAGTTTTACCTG------------------------------------------ 261
consensus_12346#0      TTGAGGGAGTTTTACCTG------------------------------------------ 907
consensus_12346#3      CTGAGGATGGCACCGCCGCCGC-------------------CATGGACGTGCTCGTGGAG 461
consensus_12346#4      CCGAGGACGGC---GCCGCCGC-------------------CGTGGACGCGCTCGTGGAG 463
consensus_12346#7      AGGAAGAAGGCCGGGCGGCGGGG------------------CGAGGCCAAGCCCCCACCC 368
                         ** *  *      * *                                          

consensus_12346#2      GCAAGTTAAGAAGAGGGAGTTTTACCTGGAGATGTTGCTATCACGGTTCGGAGGAAATGA 590
consensus_12346#5      GCAAGTTAAGAAGAGGGAGTTTTACCTG-AGATGTTGCTATCACGGTCCGGAGGAAATGA 399
consensus_12346#1      -----------------------------AGATGTTGCTATCACGGTTCGGAGGAAATGA 548
consensus_12346#6      -----------------------------AGATGTTGCTATCACGGTTCGGAGGAAATGA 292
consensus_12346#0      -----------------------------AGATGTTGCTATCACGGTTCGGAGGAAATGA 938
consensus_12346#3      GCGTTCCTAGAGGAG--------------GAGCGAGGCGGCGGGTTCGTGGAGGGGGAGG 507
consensus_12346#4      GCGTTCCTGGAGGAGAAG-----------GAGCGGGGCGGCGGGTTCGTGGATGGGGAGG 512
consensus_12346#7      CCACCCCCGCCGCAG--------------CTGCGGGGCGGCGAGA-CGAAGAAGAAGAAG 413
                                                        *  **            ** *      

consensus_12346#2      ATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGT 650
consensus_12346#5      ATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGT 459
consensus_12346#1      ATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGT 608
consensus_12346#6      ATTGACACTTCACAGTTATAGAAGCCCTCGGATATGCTCAA-TTTATAANCTT-TTGAAT 350
consensus_12346#0      ATTGACACTTGCAAGTTAAGAAGGCAGTCGGATATGCTCAAGTTTATAAGCTTGTTGAGT 998
consensus_12346#3      AG-GACGTGTACAAGCTGATGCGGCTTGTGCGCACGCTGGTGGCGAAGGAGAGGGCGCGC 566
consensus_12346#4      AG-GACGTGTACAAGCTGACGCGGCTGGTGCGCGCGCTGGTGGCGAAGGGGAGGGCGCGC 571
consensus_12346#7      AA-GCCAGACGCGAG--GACGGCGGTTATG-ACACNTTTAAAGTTACTTAGCT------- 462
                       *  * *       **        *     *       *       *              

consensus_12346#2      GAGGGTTTGGTGGTATTTAATTTTTTTC--CCCGNTATTGGTAAC-AATTGN-TCGCTAA 706
consensus_12346#5      GAGGGTT-GGTGGTATTA---TTTTTTC--CCCGTTATTGTTAAC-AATTGT-TTGCTAA 511
consensus_12346#1      GAGGGTT-GGTGGTATTA---TTTTTTC--CCCGTTATTGTTAAC-AATTGT-TTGCTAA 660
consensus_12346#6      GANGTT---GTGGTATTA---TTTTTTC--CCCCTTATTGTTAACCAATTGTGTTGCTAA 402
consensus_12346#0      GAGGGTT-GGTGGTATTA---TTTTTTC--CCCGTTATTGTTAAC-AATTGT-TTGCTAA 1050
consensus_12346#3      GCGGCGTGGAGGGTGTACTAGCTGGCGCGTGTGGGGACTACAGACAGACTTAGATGTAAA 626
consensus_12346#4      GCGGCGTGGAGGGTGTACGAGGCGGCG---GTGAGGAT----GGGAGGCTGCGAGGTGGA 624
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      AGCATAGAGCAATAGTTAGCTTGGGTTTGAATGCCTTCATCCAATTCTGA---------- 756
consensus_12346#5      AGCATAGAGCAATAGTTAGCTTGG-TTTGAATGCCTTCATCCAATTCTGATGATCCTGAC 570
consensus_12346#1      AGCATAGAGCAATAGTTAGCTTGG-TTTGAATGCCTTCATCCAATTCTGATGATACTGAC 719
consensus_12346#6      ACCATAGACCCATA-TTACCTTGG-TTTGAAACCCTCAACCACATTCTGATGAT-CTGAC 459
consensus_12346#0      AGCATAGAGCAATAGTTAGCTTGG-TTTGAATGCCTTCATCCAATTCTGATGATACTGAC 1109
consensus_12346#3      GCTGAGGGACTTCAGATGAACTTATTCCGACCGGGAATGCCTGGGCCCAATCGGACCATA 686
consensus_12346#4      CGAGTACATGTACAGGGTGATGGCGAGGGGGATGAAGCGGCTGGGCTT------------ 672
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      CTAGCTAATCT-CACTC-AGATTTGATTCTGAATGATTAAATCCCAACCTAATCCTATTC 628
consensus_12346#1      CTAGCTAATCT-CACTC-AGATTTGATTCTGAATGAATGAATC----------------- 760
consensus_12346#6      CTACCTAATCTTCNCTCCAAATTTGATTCTGAATGATTAAATCCCCACCTAATCCCCAC- 518
consensus_12346#0      CTAGCTAATCT-CACTC-AGATTTGATTCTGAATGATTAAATCCCAACCTAATCCCATTC 1167
consensus_12346#3      TACTCCGGCACTGGGCCCA----------------------------------------- 705
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ACGATTTGGTTTTGGTCTTTTGANGTGATAAAATATGT---------------------- 666
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      ACGATTTGGTTTTGGTCTTTTGAGGTGATAAAATATGTTCCCTGTATTTTTTTCCCTTTC 1227
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ------------------------------------------------------------
consensus_12346#5      ------------------------------------------------------------
consensus_12346#1      ------------------------------------------------------------
consensus_12346#6      ------------------------------------------------------------
consensus_12346#0      CTATTACACTTGCAATATGTTCCCTGTATTTGTTTTCCTTTTTTATTCCACTTAAGAAAC 1287
consensus_12346#3      ------------------------------------------------------------
consensus_12346#4      ------------------------------------------------------------
consensus_12346#7      ------------------------------------------------------------
                                                                                   

consensus_12346#2      ---------------------------------------------------------
consensus_12346#5      ---------------------------------------------------------
consensus_12346#1      ---------------------------------------------------------
consensus_12346#6      ---------------------------------------------------------
consensus_12346#0      ATTTCTGCTGGAGATATAATCATATAAATATCGCTCTCATTCTACCCAAAAAAAAAA 1344
consensus_12346#3      ---------------------------------------------------------
consensus_12346#4      ---------------------------------------------------------
consensus_12346#7      ---------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)