cluster # 12353

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Oryza sativa
cluster # 12353 cluster # 12353 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12353#0 length = 1206 sequences # 10
consensusID : consensus_12353#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1206
fasta sequence
                              [AGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGA-GGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGC--TGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCA-CCGCGGCGAGCCCCTCCGCTCCGTCA-AGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAAAAAGAATA-AATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTTGTTGTTGATTAATAAA-C-GTGTTAATAAAAGAGGGAAGGATTCTTTTAAAAAAAAAAAAAAAAAGGA]

[+] EMBL AK064924             [AGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGA GGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGC  TGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCA CCGCGGCGAGCCCCTCCGCTCCGTCA AGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAAAAAGAATA AATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTTGTTGTTGATTAATAAA C GTGTTAATAAAAGAGGGAA                              ]
[+] EMBL AK072141             [AGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGGATTATAATCCTTTGATGGGTTGGA GGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGC  TGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCA CCGCGGCGAGCCCCTCCGCTCCGTCA AGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGT                                                                                                                                       ]
[+] EMBL CF325640             [             CGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGAGGGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU030240             [                                                                                                                                                                            CATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGTCGACGCGCATNACGTCTTCGAATTATAATCCTTTGATGGGTTGGA GGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCNACATCCAAACNACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCG CTTCCGCAAGACACATn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB628994             [                                                                                                                                                                                                                                                                                                                                                                                                            GATATTCTGATGAACAACGATCCCGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGC  TGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCA CCGCGGCGAGCCCCTCCGCTCCGTCA AGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGAGATGAAGCATTGATCGTACTTTTTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTATGAATCTGGATATGTTCTATCTGATTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAAAAAGAATA AATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTTGTTGTTGATTAATAAA C GTG TGATAAAAGAGGGAAG                             ]
[-] EMBL CB628954             [                                                                                                                                                                                                                                                                                                                                                                                                                                       AAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGC  TGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCA CCGCGGCGAGCCCCTCCGCTCCGTCA AGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGAGATGAAGCATTGATCGTACTTTTTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTATGAATCTGGATATGTTCTATCTGATTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAAAAAGAATA AATTTTGTGCGAAACGGAAGGTGTGATTGTCCTTTTTGTACGTCCATTGTTTGTTGTTGATTAATAAA C GTGTTAATAAAAGAGGGAAGGATTCTTTTAAAAAAAAAAAAAAAAAGGA]
[-] EMBL CB619377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGC  TGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCA CCGCGGCGAGCCCCTCCGCTCCGTCA AGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGAGATGAAGCATTGATCGTACTTTTTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTATGAATCTGGATATGTTCTATCTGATTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAAAAGGAATANAATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTAGTGGTTGATTAATAAATC GTGTTAATAAAAGAGGGAAGGAATCGTTaat                  ]
[+] EMBL AU030241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACNCNTGGATNCCGNCATGGNATCA NNNTTCGANTTCCCNTTNAANCTNCCGGNCTTNNCNC  TNCTCCGGNTGGTNGTNCACNNGTCCGACANCCACCNGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGCGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCA CCGCGGCGAGCCCCTCCGCTCCGTCA AGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTCGTNGTNGTTCCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATAGCNATGTNGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGNNGTTTTGTTTTAAAAAAGAATA AATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTTGTTGTTGATTAATAAA C GTGTTAATAAAAGAGGGANGGATTCTTTTAAAAAAAAA           ]
[+] EMBL BI806235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCC GCATGGGATCACNAGTTC AGTTCCCGTTGAGCGTG CGGAGCTGGCGCCTTGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCACCCGCGGCGAGCCCCTCCGCTCCGTCATAGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATA CAATGTAGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTT                                                                                                                                                   ]
[+] EMBL AU184715             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  cgGGCGAGCCCCTCCGGTCCGTCA AGCTCCTCATGCGCTTNGACTTCCCCTGACTACTCCATCTTNTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAAAAAGAATA AATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTTGTTGTTGATTAATAAA CGGTGTTAATAAAAGAGGGAAGGATTNTTTTAAAAAAAAAAAAA       ]




>consensus_12353#0
AGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGC
GCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCG
ATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCA
CCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGT
CGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGAGGTATGGAGTTCAGA
TGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCC
GAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAG
ATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGT
ACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCC
CAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGA
CGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGA
GCGTGCCGGAGCTGGCGCTGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGG
ACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCG
TCAGGCTCTGCGACCACCGCGGCGAGCCCCTCCGCTCCGTCAAGCTCCTCATGCGCTTCG
ACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTT
CCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATAG
CAATGTAGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTT
CTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAA
AAAGAATAAATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTT
GTTGTTGATTAATAAACGTGTTAATAAAAGAGGGAAGGATTCTTTTAAAAAAAAAAAAAA
AAAGGA
clustalw multiple alignements is not computed in this case