Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12368 cluster # 12368       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12368#0 length = 2286 sequences # 5  
consensus_12368#1 length = 1374 sequences # 1  
consensus_12368#2 length = 722 sequences # 4  

consensusID : consensus_12368#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2286
fasta sequence
                              [TTCTTCCTCCCTGTGCTTTTCCCCTTTCCTTTCTCTGATTTCTCTCAAATGAATTACTGTTACCAGTTGGTGTGATTCTCCAGCCGAAACTTCACCAACCAAGCAGGAATGGCGCTCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCGGCACCGAGTACCTCCGCCGCTTCCTGGGCGGCGCCGCCGGCGACGACGACGACGTGCGAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGCACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGTTCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCTACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCCCCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTGGCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTCGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGCAGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTCAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGGATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTTCAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCGTTGGTCTCACCAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCATCCCATGTGTCATATGCATTGCTTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGGATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTCACTACCTTTGCAGGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATGCGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTTGGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAGATAATAATTGTACTGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGTCCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGATCCACTCATCTCCATCTTGGCACGTCCTTTTTCAGTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATAGCCTTTGGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGACTGTGT]

[+] EMBL AK099376             [TTCTTCCTCCCTGTGCTTTTCCCCTTTCCTTTCTCTGATTTCTCTCAAATGAATTACTGTTACCAGTTGGTGTGATTCTCCAGCCGAAACTTCACCAACCAAGCAGGAATGGCGCTCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCGGCACCGAGTACCTCCGCCGCTTCCTGGGCGGCGCCGCCGGCGACGACGACGACGTGCGAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGCACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGTTCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCTACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCCCCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTGGCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTCGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGCAGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTCAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGGATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTTCAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCGTTGGTCTCACCAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCATCCCATGTGTCATATGCATTGCTTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGGATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTCACTACCTTTGCAGGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATGCGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTTGGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAGATAATAATTGTACTGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGTCCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGATCCACTCATCTCCATCTTGGCACGTCCTTTTTCAGTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATAGCCTTTGGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGA      ]
[+] EMBL AK064372             [                                                                AGTTGGTGTGATTCTCCAGCCGAAACTTCACCAACCAAGCAGGAATGGCGCTCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCGGCACCGAGTACCTCCGCCGCTTCCTGGGCGGCGCCGCCGGCGACGACGACGACGTGCGAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGCACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGTTCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCTACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCCCCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTGGCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTCGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGCAGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTCAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGGATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTTCAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCGTTGGTCTCACCAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCATCCCATGTGTCATATGCATTGCTTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGGATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTCACTACCTTTGCAGGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATGCGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTTGGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAGATAATAATTGTACTGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGTCCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGATCCACTCATCTCCATCTTGGCACGTCCTTTTTCAGTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATAGCCTTTGGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGACTGTGT]
[+] EMBL CA767214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTCACTACCTTTGCAGGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCCACAATGCGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTTGGGTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATGCCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAANGNTTTTCAGCCAAGCAACTNCCAGCTGTCGTTCAGCCGAATTTGAGAGGAAATAATAATTGTACTGNCTGNTCGGTTGGCGTCTCGGTGACAGGANAAGGCATGNTCCTTATG AAAGGTCAGTCCTGATCACGAATAAGTGGCGCANCATTGCAATTCGTGCNCTGGANAAGGATGATCCAC                                                                                                                                                                                           ]
[+] EMBL CF307302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGATTGTCACTACCTTTGCAGGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATGCGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTTGGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF323786             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATGCGACGCCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATAAGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTTGGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_12368#0 TTCTTCCTCCCTGTGCTTTTCCCCTTTCCTTTCTCTGATTTCTCTCAAATGAATTACTGT TACCAGTTGGTGTGATTCTCCAGCCGAAACTTCACCAACCAAGCAGGAATGGCGCTCCTG CTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCACC GCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCGGC ACCGAGTACCTCCGCCGCTTCCTGGGCGGCGCCGCCGGCGACGACGACGACGTGCGAGAC GCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACCGC GTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCCTC AGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGGAG CTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGCAC ACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGTTCGCC TTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCTACTAC CACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCCCCCTG GAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTGGCCTA CTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTCGGGGG ATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGCAGCTC AGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTCAAGGA TCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGGATGGG ATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTTCAATG TCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCGTTGGTCTCACCAATC TATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCATCCCAT GTGTCATATGCATTGCTTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGGATGAA AATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTT GTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTCACTACCTTTGCA GGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATGCGACG CCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATA AGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTT GGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTAT ATCCTTTTCTGGGAGCTGACCAATACCTGTGATAGCAATGTTGCCATTGACATCGACCAA ACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAA ATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTT GATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCG ACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTT TTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAGATAATAATTGTAC TGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGT CCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGATCCACT CATCTCCATCTTGGCACGTCCTTTTTCAGTCTGGAATTTGGTCTCAGGAGTATCATTTCG TGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATAGCCTTTGGGCG TAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGA CTGTGT



consensusID : consensus_12368#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1374
fasta sequence
                              [TTCACCAACCAAGCAGGAATGGCGCTCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCGGCACCGAGTACCTCCGCCGCTTCCTAGGCGGCGCCGCCGGCGACGACGACGACGTGCGAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGCACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGTTCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCTACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCCCCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTGGCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTCGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGCAGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTCAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGGATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTTCAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCATTGGTCTCACCAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCATCCCATGTGTCATATGCATTGCCTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGGATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTTGATGCTATGAGTTGATTGTCACTACCTTTGCAGGCAAGCTGTTGGGCTACTTTTTATCCCTTTTTTTTCAGACATGGCTAGGTTTATCTTATATCTGATCATTGAAAGCTCTCATC]

[+] EMBL AK107353             [TTCACCAACCAAGCAGGAATGGCGCTCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCGGCACCGAGTACCTCCGCCGCTTCCTAGGCGGCGCCGCCGGCGACGACGACGACGTGCGAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGCACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGTTCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCTACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCCCCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTGGCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTCGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGCAGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTCAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGGATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTTCAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCATTGGTCTCACCAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCATCCCATGTGTCATATGCATTGCCTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGGATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTTGATGCTATGAGTTGATTGTCACTACCTTTGCAGGCAAGCTGTTGGGCTACTTTTTATCCCTTTTTTTTCAGACATGGCTAGGTTTATCTTATATCTGATCATTGAAAGCTCTCATC]


>consensus_12368#1 TTCACCAACCAAGCAGGAATGGCGCTCCTGCTGCCGGAGTTCGACCCGGCGGACGTCCGC GCCGGCCGCGACCTCATCCACCGCCTCACCGCCGACGCCGCCGGCATCCAGCGGGGCGTC CTCCGCGAGATCCTCTCCCGGAACTCCGGCACCGAGTACCTCCGCCGCTTCCTAGGCGGC GCCGCCGGCGACGACGACGACGTGCGAGACGCATTCAAGAGGCGCGTCCCCGTGTCCGGC TACGAGGATGTCAAGCCGTACGTCGACCGCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCC CTCCTCTGCTCCGACCCCATCACCTGCCTCAGCAGGAGCTCCGGCACGTCCGGCGGGCAG CAGAAGCTGTTGCCGTCCACCGCGGAGGAGCTCGACAGGAAGGTATTCTTCTATGCTGTC CAGGCGCTCGTGAGGAACATGAGCTTGCACACCGATCATGGTGAAGACGACGACGGCGGT GGTGGCGAGGGAATGTACCTCATGTTCGCCTTCCACGGTGACCGGACATTGTCTGGCCTG CCCATCCAGTCTGCTCTAACTACCTACTACCACAGCAGACAGTTTCAGGAATGCGACATT GGCGGGTTTGATAAGTGCACAAGCCCCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAG AGCATGTACTGCCAGTTGCTCTGTGGCCTACTTCACCGATGCAGAGTGGACCGTGTTGGT GCCAGCTTTGCCGCTGGGTTGGTTCGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAG ATGTGCTTCAACATCCGGAGCGGGCAGCTCAGCGACTGGATCACGCATACTCCTCTGCGT GATGCGGTCACTGGACAGTATCTTCAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCA TCCGAGTGTGCGAGGAAACCTTGGGATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGG TATATCCGGACCATTGTGACTGGTTCAATGTCACAGTACATTCCAATTCTTGAGGTTTAT GGTGGCGGGCTACCATTGGTCTCACCAATCTATGCATCTACAGAATGCGCTGCCGGGATA AATCTGAGGCCACTTGATCCACCATCCCATGTGTCATATGCATTGCCTCCAAACATTGCT TACTTTGAGTTCTTGGAGGTCATGGATGAAAATGGTGAAAAGGTACAAGGAACTACCAGG CTTGATGACAATTTGGGTGAGGTAAAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTTGA TGCTATGAGTTGATTGTCACTACCTTTGCAGGCAAGCTGTTGGGCTACTTTTTATCCCTT TTTTTTCAGACATGGCTAGGTTTATCTTATATCTGATCATTGAAAGCTCTCATC



consensusID : consensus_12368#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 722
fasta sequence
                              [AAGGGGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATGCCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAAATAATAATTGTACTGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGTCCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGATCCACTCATCTCCATCTTGGCACGTCCTTTTTTA-GTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATCGCCTTTGGCCTTCGGCCGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGACTGTGTTCTCAAAAAAA]

[+] EMBL CB096425             [AAGGGGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATGCCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAAATAATAATTGTACTGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGTCCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGATCCACTCATCTCCATCTTGGCACGTCCTTTTTTA GTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCCTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTNCACATCGCCTTTGGCCTTCGGCCGGCGTAACTGTAGACACAACCCTTGCTNCGANGTTTAT                                           ]
[+] EMBL BI798472             [                                                                                                                                                                                                   TTCTTACCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGTCTAGAGGGACATCAGCGAGTCAATAC AAACTCCGACACCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTCGTTCAGCCGAATTTGAGAGGAAATAATAATTGTACTGCCTGTTCGGTTGGCGTCTCGGTGACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGTCCTGATCACGAATAAGTGGCGCAGCATTGCAATTCGTGCACTGGAGAAGGATGATCCACTCATCTCCATCTTGGCACGTCCTTTTTTACGTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATC CCTTT GCCTTCGGCCGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGACTGTGTTCTCAAAAAAA]
[-] EMBL AI978342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGATCCACTCATCTCCATCTTGGCACGTCCTTTTTTA GTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATCGCCTTTGGCCTTCGGCCGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGACTGTGTTC         ]
[+] EMBL AI978343             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACTCATCTCCATCTTGGCACGTCCTTTTTTA GTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAACTTCTGTACTGCTCCTTCCACATCGCCTTTGGCCTTCGGCCGGCGTAACTGTAGACACAACCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGACTGTGTTCTCAAgtc  ]


>consensus_12368#2 AAGGGGCAGACATATCCACTTTGCCTGGCCACTATATCCTTTTCTGGGAGCTGACCAATG CCTGTGATAGCAATGTTGCCATTGACATCGACCAAACTGCCATGGAGAAGTGTTGCTTGG CAGTGGAAGACCACTTCGATGAAATGTACCGCAAAATTAGGCACCGTGGCTCAATCAGTG CGCTCGAGATAAGGATTCTTAGCCATGGTGCGTTTGATGCTCTGATGGACTTCTTTGTGT CTAGAGGGACATCAGCGAGTCAATACAAAACTCCGACAGCCATTCGGTCGAAAGAGGCGA TGATGGTATTGGAGGAAAGGGTTGTAGGAAGGTTTTTCAGCCAAGCAACTCCCAGCTGTC GTTCAGCCGAATTTGAGAGGAAATAATAATTGTACTGCCTGTTCGGTTGGCGTCTCGGTG ACAGGAGAGGGCATGTTCCTTATGAAAAGTTCAGTCCTGATCACGAATAAGTGGCGCAGC ATTGCAATTCGTGCACTGGAGAAGGATGATCCACTCATCTCCATCTTGGCACGTCCTTTT TTAGTCTGGAATTTGGTCTCAGGAGTATCATTTCGTGTTTTCTTGTAAATTCAGAAAGAA CTTCTGTACTGCTCCTTCCACATCGCCTTTGGCCTTCGGCCGGCGTAACTGTAGACACAA CCCTTGCTCCGAGGTTTATAAGTTACCTCCGAATTTACTGATTGACTGTGTTCTCAAAAA AA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12368#0      TTCTTCCTCCCTGTGCTTTTCCCCTTTCCTTTCTCTGATTTCTCTCAAATGAATTACTGT 60
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      TACCAGTTGGTGTGATTCTCCAGCCGAAACTTCACCAACCAAGCAGGAATGGCGCTCCTG 120
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      CTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCACC 180
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      GCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCGGC 240
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      ACCGAGTACCTCCGCCGCTTCCTGGGCGGCGCCGCCGGCGACGACGACGACGTGCGAGAC 300
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      GCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACCGC 360
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      GTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCCTC 420
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      AGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGGAG 480
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      CTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGCAC 540
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      ACCGATCATGGTGAAGACGACGACGGCGGTGGTGGCGAGGGAATGTACCTCATGTTCGCC 600
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      TTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCTACTAC 660
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      CACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCCCCCTG 720
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      GAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTGGCCTA 780
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      CTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGCCGCTGGGTTGGTTCGGGGG 840
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      ATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGGCAGCTC 900
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      AGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTTCAAGGA 960
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      TCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGGGATGGG 1020
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      ATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGTTCAATG 1080
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      TCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCGTTGGTCTCACCAATC 1140
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      TATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCATCCCAT 1200
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      GTGTCATATGCATTGCTTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATGGATGAA 1260
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      AATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTAAAAGTT 1320
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      GTTGACCTTGTGGATGTCAAAGTTGGTCGATGCTATGAGTTGATTGTCACTACCTTTGCA 1380
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      ------------------------------------------------------------
                                                                                   

consensus_12368#0      GGTCTTTACAGGTACCGGGTGGGTGACCTGTTTACTGTGAGTGGCTTCTACAATGCGACG 1440
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      --------------------------------TTCACCAACCAAGCAGGAATGGCGCTCC 28
                                                                                   

consensus_12368#0      CCATTGTTTCACTTCTCAGGACGGCATGATGTCATCCTAAGCATAGATTACGAGAAGATA 1500
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      TGCTGCCGGAGTTCGACCCGGCGGACGTCCGCGCCGGCCGCGACCTCATCCACCGCCTCA 88
                                                                                   

consensus_12368#0      AGTGAGGAGGACCTTCTCAATGCCATTGCAGAAACAGATAAGTTCCACCTCAGGCCTCTT 1560
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      CCGCCGACGCCGCCGGCATCCAGCGGGGCGTCCTCCGCGAGATCCTCTCCCGGAACTCCG 148
                                                                                   

consensus_12368#0      GGCTACATGCTTGTTGGTAGCACTGCATATGCAGACATATCCACTTTGCCTGGCCACTAT 1620
consensus_12368#2      -------------------------AAGGGGCAGACATATCCACTTTGCCTGGCCACTAT 35
consensus_12368#1      GCACCGAGTACCTCCGCCGCTTCCTAGGCGGCGCCGCCGGCGACGACGACGACGTGCGAG 208
                                                     **        * **   * *      * * 

consensus_12368#0      ATCCTTTTCTGGGA-GCTGACCAATACCTG-TGATAGCAATGTTGCCATTGACATCGACC 1678
consensus_12368#2      ATCCTTTTCTGGGA-GCTGACCAATGCCTG-TGATAGCAATGTTGCCATTGACATCGACC 93
consensus_12368#1      ACGCATTCAAGAGGCGCGTCCCCGTGTCCGGCTACGAGGATGTCAAGCCGTACGTCGACC 268
                       *  * **   * *  **   **  *  * *   *     ****        ** ******

consensus_12368#0      AAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCA 1738
consensus_12368#2      AAACTGCCATGGAGAAGTGTTGCTTGGCAGTGGAAGACCACTTCGATGAAATGTACCGCA 153
consensus_12368#1      GCGTCGCGTCCGGCGGCGAGCCCTCCTCTGCCCTCCTCTGCTCCGACCCCATCACCTGCC 328
                            **    *          **   * *       *  ** ***    **   * ** 

consensus_12368#0      AAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTC--TTAGCCATGGTGC 1796
consensus_12368#2      AAATTAGGCACCGTGGCTCAATCAGTGCGCTCGAGATAAGGATTC--TTAGCCATGGTGC 211
consensus_12368#1      TCAGCAGGAGCTCCGGCACGTCCGGCGGGCAGCAGAAGCTGTTGCCGTCCACCGCGGAGG 388
                         *  ***  *   *** *   * * * **   ***    * * *  *   **  ** * 

consensus_12368#0      -GTTTGATGCTCTGATGGACTTCTTTG-TGTCTAGAGGGACATCAGCGAGTCAATACAAA 1854
consensus_12368#2      -GTTTGATGCTCTGATGGACTTCTTTG-TGTCTAGAGGGACATCAGCGAGTCAATACAAA 269
consensus_12368#1      AGCTCGACAGGAAGGTATTCTTCTATGCTGTCCAGGCGCTCGTGAGGAACATGAGCTTGC 448
                        * * **      * *   ***** ** **** **  *  * * **  *    *      

consensus_12368#0      ACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGA 1914
consensus_12368#2      ACTCCGACAGCCATTCGGTCGAAAGAGGCGATGATGGTATTGGAGGAAAGGGTTGTAGGA 329
consensus_12368#1      ACACCGATCATGGTGAAGACGACGACGGCGGTGGTGGC---GAGGGAATGTACCTCATGT 505
                       ** ****      *   * ***    **** ** ***    *  **** *      * * 

consensus_12368#0      AGGTTTTTCA-----GCCAAGCAACTCCCAGCTG--TCGTTCAGCCGAATTTGAGAGGAG 1967
consensus_12368#2      AGGTTTTTCA-----GCCAAGCAACTCCCAGCTG--TCGTTCAGCCGAATTTGAGAGGAA 382
consensus_12368#1      TCGCCTTCCACGGTGACCGGACATTGTCTGGCCTGCCCATCCAGTCTGCTCTAACTACCT 565
                         *  ** **      **   **    *  **     * * *** *   * * *      

consensus_12368#0      ATAATAATTGTACTGCCTGTTCGGTTGGCGTC-TCGGTGAC----AGGAGAGGGCATGTT 2022
consensus_12368#2      ATAATAATTGTACTGCCTGTTCGGTTGGCGTC-TCGGTGAC----AGGAGAGGGCATGTT 437
consensus_12368#1      ACTACCACAGCAGACAGTTTCAGGAATGCGACATTGGCGGGTTTGATAAGTGCACAAGCC 625
                       *  *  *  * *     * *  **   *** * * ** *      *  ** *  ** *  

consensus_12368#0      CCTTATGAAAAGT--TCAGTCCTGATCACGAATAAGTGGCGCA---------GCATTGCA 2071
consensus_12368#2      CCTTATGAAAAGT--TCAGTCCTGATCACGAATAAGTGGCGCA---------GCATTGCA 486
consensus_12368#1      CCCTGGAGGCAATCCTCTGCCCCTATGGCGAGCAGAGCATGTACTGCCAGTTGCTCTGTG 685
                       ** *      * *  ** * **  **  ***  *      * *         **  **  

consensus_12368#0      ATTCG-TGCACTGGAGAAGGATGATCCAC-TCATCTCCATCTTGGCACGTCCTTTTTCAG 2129
consensus_12368#2      ATTCG-TGCACTGGAGAAGGATGATCCAC-TCATCTCCATCTTGGCACGTCCTTTTTTAG 544
consensus_12368#1      GCCTACTTCACCGATGCAGAGTGGACCGTGTTGGTGCCAGCTTTGC-CGCTGGGTTGGTT 744
                             * *** *  * **  **  **   *     *** *** ** **     **    

consensus_12368#0      TCTGGAATTTGGTCTCAGGAGTATCATTTCGTG----TTTTCTTGTAAATTCAGAAAGAA 2185
consensus_12368#2      TCTGGAATTTGGTCTCAGGAGTATCATTTCGTG----TTTTCTTGTAAATTCAGAAAGAA 600
consensus_12368#1      CGGGGGATCAAGTTCTTGGAAAATCACTGGGAGGAGATGTGCTTCAACATCCGGAGCGGG 804
                          ** **   **    ***  **** *  * *    * * ***  * ** * **  *  

consensus_12368#0      CTTCTGTACTGCTCCTTC-CACATAGCCTTTGG----------GCGT--AACTGTAGACA 2232
consensus_12368#2      CTTCTGTACTGCTCCTTC-CACATCGCCTTTGGCCTTCGGCCGGCGT--AACTGTAGACA 657
consensus_12368#1      CAGCTCAGCGACTGGATCACGCATACTCCTCTGCGTGATGCGGTCACTGGACAGTATCTT 864
                       *  **   *  **   ** * ***   * *  *           *     ** ***    

consensus_12368#0      CAACCCTTGCTCCGAGGTTTAT------AAGTTACCTCCGAATTTACTGATTGACTGTGT 2286
consensus_12368#2      CAACCCTTGCTCCGAGGTTTAT------AAGTTACCTCCGAATTTACTGATTGACTGTGT 711
consensus_12368#1      CAAGGATCTAACCCAGCTTTAGCCGATGAGATTGCATCCGAGTGTGCGAGGAAACCTTGG 924
                       ***   *    ** ** ****       *  ** * ***** * * *      **  ** 

consensus_12368#0      ------------------------------------------------------------
consensus_12368#2      TCTCAAAAAAA------------------------------------------------- 722
consensus_12368#1      GATGGGATAGTCAGGAGGCTATGGCCTAGGGCACGGTATATCCGGACCATTGTGACTGGT 984
                                                                                   

consensus_12368#0      ------------------------------------------------------------
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      TCAATGTCACAGTACATTCCAATTCTTGAGGTTTATGGTGGCGGGCTACCATTGGTCTCA 1044
                                                                                   

consensus_12368#0      ------------------------------------------------------------
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      CCAATCTATGCATCTACAGAATGCGCTGCCGGGATAAATCTGAGGCCACTTGATCCACCA 1104
                                                                                   

consensus_12368#0      ------------------------------------------------------------
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      TCCCATGTGTCATATGCATTGCCTCCAAACATTGCTTACTTTGAGTTCTTGGAGGTCATG 1164
                                                                                   

consensus_12368#0      ------------------------------------------------------------
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      GATGAAAATGGTGAAAAGGTACAAGGAACTACCAGGCTTGATGACAATTTGGGTGAGGTA 1224
                                                                                   

consensus_12368#0      ------------------------------------------------------------
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      AAAGTTGTTGACCTTGTGGATGTCAAAGTTGGTTGATGCTATGAGTTGATTGTCACTACC 1284
                                                                                   

consensus_12368#0      ------------------------------------------------------------
consensus_12368#2      ------------------------------------------------------------
consensus_12368#1      TTTGCAGGCAAGCTGTTGGGCTACTTTTTATCCCTTTTTTTTCAGACATGGCTAGGTTTA 1344
                                                                                   

consensus_12368#0      ------------------------------
consensus_12368#2      ------------------------------
consensus_12368#1      TCTTATATCTGATCATTGAAAGCTCTCATC 1374
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)