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Oryza sativa
cluster # 12372 cluster # 12372       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12372#0 length = 1957 sequences # 9  
consensus_12372#1 length = 145 sequences # 1  

consensusID : consensus_12372#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1957
fasta sequence
                              [AAACCCTCTTCCTCTCTCTCTCTCGCTTCGTCTTCCTCCTCCACACGAAGCGGCAGCGCCACCACCACCTCCGCCGCTCTCTCCACTGCGCCGCCGGCGCCATGAGCCTCCTCAGCAACTCCCTCCTGCTCCAAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGTGGCGGCGGCGGCGATGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAACAACATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCACTACCTATTGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCCACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTGATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAACCTTTACAACTTCTTGATCTCCACTTGTGGGAAAAGCAAAAACTCAGATGCAGCGATCATGCTTTTAGAAGAAATGAAGGCACATGGCGTTAAGTTGAAAGGTGAAACATACACTTGTCTTTTGAATGCACTTGCAGCAACAGGGCGTACAGATCAAGTGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAAACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGGAGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAAGAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATAACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTTATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGACACTTGAAGTACTTCTTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGATGCAAGCTATGAGGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAAGCTCAAAATCCCCGCCTGCAGAGTTGTATGTGACACTTGCTGAGGGAGCTATGATTGGGCATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGAGAAGATGACTTCGAGAAATTTCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGACTGGTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCG-CAGAATCACTCCATCACTT-CCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATGATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTAACGCACAGGCATAATGTCGTCGTCACTAAT-CCAATGCGAGTTAGATTTTGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAACTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCAT-CCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTGCTACCTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATAATTGTTGTGAGTTTAACTTCAAAGAATCACTGGAAGAATTTTATGCAAAGGAATATTATGACTCCCTGGTTCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101887             [AAACCCTCTTCCTCTCTCTCTCTCGCTTCGTCTTCCTCCTCCACACGAAGCGGCAGCGCCACCACCACCTCCGCCGCTCTCTCCACTGCGCCGCCGGCGCCATGAGCCTCCTCAGCAACTCCCTCCTGCTCCAAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGTGGCGGCGGCGGCGATGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAACAACATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCACTACCTATTGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCCACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTGATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAACCTTTACAACTTCTTGATCTCCACTTGTGGGAAAAGCAAAAACTCAGATGCAGCGATCATGCTTTTAGAAGAAATGAAGGCACATGGCGTTAAGTTGAAAGGTGAAACATACACTTGTCTTTTGAATGCACTTGCAGCAACAGGGCGTACAGATCAAGTGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAAACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGGAGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAAGAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATAACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTTATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGACACTTGAAGTACTTCTTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGAT CCAGCTATGAGGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAAGCTCAAAATCCCCGCCTGCAGAGTTGTATGTGACACTTGCTGAGGGAGCTATGATTGGGCATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGAGAAGATGACTTCGAGAAATTTCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGACTGGTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCG CAGAATCACTCCATCACTT CCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATGATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTAACGCACAGGCATAATGTCGTCGTCACTAAT CCAATGCGAGTTAGATTTTGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAACTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCAT CCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTGCTACCTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATAATTGTTGTGAGTTTAACTTCAAAGAATCACTGGAAG                                                             ]
[+] EMBL AK063945             [ AACCCTCTTCCTCTCTCTCTCTCGCTTCGTCTTCCTCCTCCACACGAAGCGGCAGCGCCACCACCACCTCCGCCGCTCTCTCCACTGCGCCGCCGGCGCCATGAGCCTCCTCAGCAACTCCCTCCTGCTCCAAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGTGGCGGCGGCGGCGATGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAACAACATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCACTACCTATTGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCCACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTGATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAACCTTTACAACTTCTTGATCTCCACTTGTGGGAAAAGCAAAAACTCAGATGCAGCGATCATGCTTTTAGAAGAAATGAAGGCACATGGCGTTAAGTTGAAAGGTGAAACATACACTTGTCTTTTGAATGCACTTGCAGCAACAGGGCGTACAGATCAAGTGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAAACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGGAGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAAGAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATAACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTTATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGACACTTGAAGTACTTCTTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGATGCAAGCTATGAGGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAAGCTCAAAATCCCCGCCTGCAGAGTTGTATGTGACACTTGCTGAGGGAGCTATGATTGGGCATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGAGAAGATGACTTCGAGAAATTTCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGACTGGTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCG CAGAATCACTCCATCACTT CCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATGATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTAACGCACAGGCATAATGTCGTCGTCACTAAT CCAATGCGAGTTAGATTTTGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAACTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCAT CCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTGCTACCTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATAATTGTTGTGAGTTTAACTTCAAAGAATCACTGGAAGAATTTTATGCAAAGGAAT                                           ]
[+] EMBL CB656933             [                                                                 CACCTCCTCCGCTCTCTCCACTGCGCCGCCGGCGCCATGAGCCTCCTCAGCAACTCCCTCCTGCTCCAAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGAGGCGGCGGCGGCGATGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAACAACATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCACTACCTATTGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCCACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTGATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAACCTTTACAACTTCTTGATCTCCACTTGTGGGAAAAGCAAAAACTCAGATGCAGCGATCATGCTTTTAGAAGAAATGAAGGCACATGGCGTTAAGTTGAAAGGTGAAACATACACTTGTCTTTTGAATGCACTTGCAGCAACAGGGCGTACAGATCAAGTGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAAACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGGAGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAAGAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATAACCTGCCAACAGCTGAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU068183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCATTCAAGAACAAGGCACCAACCACTGAGGAGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAAGAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATAACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTTATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGACACTTGAAGTACTTCTTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGATGCAAGCTATGAGGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAAGCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB656934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATGTGACACTTGCTGAGGGAGCTATGATTGGGCATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGAGAAGATGACTTCGAGAAATTTCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGACTGGTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCG CAGAATCACTCCATCACTT CCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATGATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTAACGCACAGGCATAATGTCGTCGTCACTAAT CCAATGCGAGTTAGATTTTGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAACTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCAT CCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTGCTACCTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATAATTGTTGTGAGTTTAACTTCAAAGAATCACTGGAAGAATTTTATGCAAAGGAATAT                                         ]
[-] EMBL CA757236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTCTACTTGCAGCTTCAGGTGAAAAGACTGGTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCG CAGAATCACTCCATCACTT CCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATGATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTAACGCACAGGCATAATGTCGTCTTCACTAAT CCAATGCGAGTTAGATTTTGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAACTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCAT CCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTGCTACCTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATAATTGTTGTGAGTTTAACTTCAAAGAAT                                                                      ]
[+] EMBL AU068184             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     acCCGCCGGAATCACTCCATCACTTCCCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATGATCCNCGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTNACGCNCAGGCATAATGTCGTCGTCACTAATCCCAATGCGAGTTAGATTTTGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAACTGAAATTAGGATAGCNCAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCATCCCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTGCTA CTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATAATTGTTGTGAGTTTAACTTCAAAGAATCACTGGAAGAATTTTATGCAAAGGAATATTATGACTCCCTGGTTCAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AA750650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTCGTCGTCACTAAT CCAATGCGAGTTAGATTTTGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAACTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCAT CCGCATCGGGAAAAATCTGATTCT                                                                                                                                                                                                                                                                           ]
[-] EMBL CA999495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAAACCATCAAGAGATGAAACCATCAAGCATGATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCAT CCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTG                                                                                                                                                                                            ]


>consensus_12372#0 AAACCCTCTTCCTCTCTCTCTCTCGCTTCGTCTTCCTCCTCCACACGAAGCGGCAGCGCC ACCACCACCTCCGCCGCTCTCTCCACTGCGCCGCCGGCGCCATGAGCCTCCTCAGCAACT CCCTCCTGCTCCAAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGTGGCGGCGGCGGCGA TGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAACA ACATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCACTACCTAT TGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCC ACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTG ATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAACCTTTACAACTTCTTGATCTCCA CTTGTGGGAAAAGCAAAAACTCAGATGCAGCGATCATGCTTTTAGAAGAAATGAAGGCAC ATGGCGTTAAGTTGAAAGGTGAAACATACACTTGTCTTTTGAATGCACTTGCAGCAACAG GGCGTACAGATCAAGTGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAA ACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGG AGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAA GAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATA ACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTT ATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGACACTTGAAGTACTTC TTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGATGCAAGCTATGA GGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAA GCTCAAAATCCCCGCCTGCAGAGTTGTATGTGACACTTGCTGAGGGAGCTATGATTGGGC ATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGAGAAGATGACTTCGAGAAATT TCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGACTG GTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCGCAGAATCACTCCAT CACTTCCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATG ATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAA GGAGAAACAGTAACGCACAGGCATAATGTCGTCGTCACTAATCCAATGCGAGTTAGATTT TGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAA CTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCAT GATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCATCCGCATCGCGGAAA ATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTAT CACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTG CTACCTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATA ATTGTTGTGAGTTTAACTTCAAAGAATCACTGGAAGAATTTTATGCAAAGGAATATTATG ACTCCCTGGTTCAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12372#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 145
fasta sequence
                              [CCTGAAGGATTTTCATCCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTGGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAAAAAAAAAAAAAAAAAAAAAAAACT]

[-] EMBL CA998190             [CCTGAAGGATTTTCATCCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTGGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGAAAAAAAAAAAAAAAAAAAAAAAACT]


>consensus_12372#1 CCTGAAGGATTTTCATCCGCATCGCGGAAAATCTGATTCTCAAGTTTCTTTTAACTTTTG TAAACTTACTGTGGTCGGAATGTTACTTATCACACTGGTTTAGAGAGTTTATTCTGCTGA AAAAAAAAAAAAAAAAAAAAAAACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12372#0      AAACCCTCTTCCTCTCTCTCTCTCGCTTCGTCTTCCTCCTCCACACGAAGCGGCAGCGCC 60
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ACCACCACCTCCGCCGCTCTCTCCACTGCGCCGCCGGCGCCATGAGCCTCCTCAGCAACT 120
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      CCCTCCTGCTCCAAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGTGGCGGCGGCGGCGA 180
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      TGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAACA 240
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ACATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCACTACCTAT 300
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      TGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCC 360
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTG 420
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAACCTTTACAACTTCTTGATCTCCA 480
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      CTTGTGGGAAAAGCAAAAACTCAGATGCAGCGATCATGCTTTTAGAAGAAATGAAGGCAC 540
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ATGGCGTTAAGTTGAAAGGTGAAACATACACTTGTCTTTTGAATGCACTTGCAGCAACAG 600
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      GGCGTACAGATCAAGTGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAA 660
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGG 720
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      AGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAA 780
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      GAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATA 840
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTT 900
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGACACTTGAAGTACTTC 960
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      TTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGATGCAAGCTATGA 1020
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      GGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAA 1080
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      GCTCAAAATCCCCGCCTGCAGAGTTGTATGTGACACTTGCTGAGGGAGCTATGATTGGGC 1140
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGAGAAGATGACTTCGAGAAATT 1200
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      TCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGACTG 1260
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      GTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCGCAGAATCACTCCAT 1320
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      CACTTCCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATG 1380
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAA 1440
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      GGAGAAACAGTAACGCACAGGCATAATGTCGTCGTCACTAATCCAATGCGAGTTAGATTT 1500
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      TGTGTTAATAAAACTGCTGGATACATCATCAATATGTTAGCACTTGAGAAGATCAACGAA 1560
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      CTGAAATTAGGATAGCACAAAGCGAATATGAAACCATCAAGAGATGAAACCATCAAGCAT 1620
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      GATGACAAGGATCAGGGTACCCAAGTCCAACCTGAAGGATTTTCATCCGCATCGCGGAAA 1680
consensus_12372#1      ------------------------------CCTGAAGGATTTTCATCCGCATCGCGGAAA 30
                                                     ******************************

consensus_12372#0      ATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTTGTCGGAATGTTACTTAT 1740
consensus_12372#1      ATCTGATTCTCAAGTTTCTTTTAACTTTTGTAAACTTACTGTGGTCGGAATGTTACTTAT 90
                       ****************************************** *****************

consensus_12372#0      CACACTGGTTTAGAGAGTTTATTCTGCTGAGTAATTTGACATTAGATGTCCATTCCATTG 1800
consensus_12372#1      CACACTGGTTTAGAGAGTTTATTCTGCTGAAAAAAAAAAAAAAAAAAAAAAAACT----- 145
                       ******************************  **    * *  * *     *        

consensus_12372#0      CTACCTTTCAGGCTTCAGCTGCGAGTGTATCTGAATGGTCATTTCTCAGTTTGACAAATA 1860
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ATTGTTGTGAGTTTAACTTCAAAGAATCACTGGAAGAATTTTATGCAAAGGAATATTATG 1920
consensus_12372#1      ------------------------------------------------------------
                                                                                   

consensus_12372#0      ACTCCCTGGTTCAAAAAAAAAAAAAAAAAAAAAAAAA 1957
consensus_12372#1      -------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)