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Oryza sativa
cluster # 12379 cluster # 12379       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12379#0 length = 911 sequences # 2  
consensus_12379#1 length = 837 sequences # 6  
consensus_12379#2 length = 754 sequences # 2  

consensusID : consensus_12379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 911
fasta sequence
                              [GGGAGGCTCGTCCCTGTCCGTCGCTCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGGTTAGATTCACGCCTCTCCAACCTCCTCCCCCAACCCCAAGAATTCCCGATCGATTGATTGACTGGCCGACCCGCCCGTTGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCAGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAATTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTG-CGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCT-GGACCTGGTCACAGCATCGCTGTGACAAACAGCGGTGCAGTGTATACTTTTGGGTCCAACAGCTCTGGTCAACTTGGGCCATGGTAAGTTGTAGAAGAAGGAGTGGGAAGGNCACGGAATTAATCAGA]

[+] EMBL CB661000             [GGGAGGCTCGTCCCTGTCCGTCGCTCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGGTTAGATTCACGCCTCTCCAACCTCCTCCCCCAACCCCAAGAATTCCCGATCGATTGATTGACTGGCCGACCCGCCCGTTGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCAGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAATTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTG CGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCT GGACCTGGTCACAGCATCGCTGTGACAAACAGCGGTGCAGTGTATACTTTTGGGTCCAACAGC                                                                 ]
[+] EMBL AU056854             [                                                                                                                                                                                                                                                                                                                                            CCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAATTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGNCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGCAGTGTATACTTTTGGGTCCAANAGCTCTGGTCAACTTGGGCCATGGTAAGTTGTAGAAGAAGGAGTGGGAAGGNCACGGAATTAATCAGA]


>consensus_12379#0 GGGAGGCTCGTCCCTGTCCGTCGCTCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCC CCCGTTTCTCGGTTAGATTCACGCCTCTCCAACCTCCTCCCCCAACCCCAAGAATTCCCG ATCGATTGATTGACTGGCCGACCCGCCCGTTGAATGGTCCTGTACTTAATTCACTCTGGA CTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGC AGCCGTGGCAGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACC TTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCAC AGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAA TTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGG CAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAATTGATATTGCCACTGATGAAATTTG TGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTT CAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAA CCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTG GTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATC GCTGGACCTGGTCACAGCATCGCTGTGACAAACAGCGGTGCAGTGTATACTTTTGGGTCC AACAGCTCTGGTCAACTTGGGCCATGGTAAGTTGTAGAAGAAGGAGTGGGAAGGNCACGG AATTAATCAGA



consensusID : consensus_12379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 837
fasta sequence
                              [TCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGGTTAGATTCACGCCTCTCCAACCTCCTCCCCCAACCCCAAGAATTCCCGATCGATTGATTGACTGGCCGACCCGCCCGTTGGTGCGTGTTCGTTGATCCTTTTTTTGCCTCTGGTGAGGAGGAGGGGGTTTGATTCTTTTGTGTTCTTGGTCCAAGAACCAAGGGGGGAATTAGCGGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGCAGTGTATACTTTTGGGT]

[+] EMBL CB627014             [TCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGGTTAGATTCACGCCTCTCCAACCTCCTCCCCCAACCCCAAGAATTCCCGATCGATTGATTGACTGGCCGACCCGCCCGTTGGTGCGTGTTCGTTGATCCTTTTTTTGCCTCTGGTGAGGAGGAGGGGGTTTGATTCTTTTGTGTTCTTGGTCCAAGAACCAAGGGGGGAATTAGCGGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGANAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTG                  ]
[+] EMBL CB662535             [                                                                                                            ACTGGCCGACCCGCCCGTTGGTGCGTGTTCGTTGATCCTTTTTTTGCCTCTGGTGAGGAGGAGGGGGTTTGATTCTTTTGTGTTCTTGGTCCAAGAACCAAGGGGGGAATTAGCGGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCAGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCANGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGCAGTGTATACTTTTGGGT]
[+] EMBL CF303868             [                                                                                                                                                                                                                                                                                                                                                                                                    TCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGCAGTGTATACTTTTGGGT]
[+] EMBL CF302990             [                                                                                                                                                                                                                                                                                                                                                                                                    TCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGCAGTGTATACTTTTGGGT]
[+] EMBL CF303916             [                                                                                                                                                                                                                                                                                                                                                                                                    TCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGCAGTGTATACTTTTGGGT]
[+] EMBL CF304833             [                                                                                                                                                                                                                                                                                                                                                                                                    TCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCACGCAATCGCTGG                                                     ]


>consensus_12379#1 TCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGGTTAGATTCACGC CTCTCCAACCTCCTCCCCCAACCCCAAGAATTCCCGATCGATTGATTGACTGGCCGACCC GCCCGTTGGTGCGTGTTCGTTGATCCTTTTTTTGCCTCTGGTGAGGAGGAGGGGGTTTGA TTCTTTTGTGTTCTTGGTCCAAGAACCAAGGGGGGAATTAGCGGAATGGTCCTGTACTTA ATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGC AGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTC TACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGT TTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTG CAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCG CTCACTTGGAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTC AGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAAC CTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGG TTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCG CTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGCAGTGTATACTTTTGGGT



consensusID : consensus_12379#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 754
fasta sequence
                              [AGGCTCGTCCCTGTCCGTCGCTCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAATTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTT-GC-GGCGGGAGTTG-GAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGT-GCAGTGTATACTTTTGGGT]

[+] EMBL CB628820             [AGGCTCGTCCCTGTCCGTCGCTCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGACGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAATTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTT GC GGCGGGAGTTG GAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGT GCAGTGTATACTTTTGGGT]
[+] EMBL AU056857             [                                                                                                                                                                                                                                                        CCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAATTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCAACGTTGGCGGGCGGGAGTTGNGAAGCTGGTTCTTAGGTTTANAATGGCAGGTGAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAGCGGTGGCAGTGTATACTTTTGGGT]


>consensus_12379#2 AGGCTCGTCCCTGTCCGTCGCTCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCC GTTTCTCGAATGGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCAC AAGTTTGAGATAAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGA CGAGCAGTGGAGCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCC TTGTTTCTCCGTTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTG CTCCTGGAGAATTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCAT GCAATCTGGAACCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCT CCAATGTAGAATTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCG TTTTTCCGGAAGCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCA GCGTTGGATATGTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAA ATGTTTAAGCAACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGT GAAGCATGTTGCCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCT GTGACAACAAGCGGTGCAGTGTATACTTTTGGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12379#0      ------------------------------------------------------------
consensus_12379#2      ------------------------------------------------------------
consensus_12379#1      TCGCCTGCTCTCATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGGTTAGATTCACGC 60
                                                                                   

consensus_12379#0      -----------------------GGGAGGCTCGTCCCTGTCCGTCGCTCGCCTGCTC--T 35
consensus_12379#2      --------------------------AGGCTCGTCCCTGTCCGTCGCTCGCCTGCTC--T 32
consensus_12379#1      CTCTCCAACCTCCTCCCCCAACCCCAAGAAT--TCCCGATCGATTGATTGACTGGCCGAC 118
                                                 **  *  ****  **  * * * * ***  *   

consensus_12379#0      CATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCGGTTAGATTCACGCCTCTCCAACCT 95
consensus_12379#2      CATCCTCTCCCTCTCTCTCTCCTCCCCCGTTTCTCG------------------------ 68
consensus_12379#1      CCGCCCGTTGGTGCGTGTTCGTTGATCCTTTTTTTGCCTCTGGTGAGGAGGAGGGGGTTT 178
                       *  **  *   *   * *    *   ** *** * *                        

consensus_12379#0      CCTCCCCCAACCCCAAGAATTCCCGATCGATTGATTGACTGGCCGACCCGCCCGTTGAAT 155
consensus_12379#2      ---------------------------------------------------------AAT 71
consensus_12379#1      GATTCTTTTGTGTTCTTGGTCCAAGAACCAAGGGGGGAATTAGCG-----------GAAT 227
                                                                                ***

consensus_12379#0      GGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGAT 215
consensus_12379#2      GGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGAT 131
consensus_12379#1      GGTCCTGTACTTAATTCACTCTGGACTTCTGGAGAGCCAGGAACACCACAAGTTTGAGAT 287
                       ************************************************************

consensus_12379#0      AAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCAGATGGACGCCACGACGAGCAGTGGA 275
consensus_12379#2      AAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGACGAGCAGTGGA 191
consensus_12379#1      AAAAGCATAAGGCAGTGCAAGTCGCAGCCGTGGCGGATGGACGCCACGACGAGCAGTGGA 347
                       ********************************** *************************

consensus_12379#0      GCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCG 335
consensus_12379#2      GCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCG 251
consensus_12379#1      GCTTCCTCCTCTCTACCCCTCCACCTTATCATAGATGATGCTCTTGCCCTTGTTTCTCCG 407
                       ************************************************************

consensus_12379#0      TTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAA 395
consensus_12379#2      TTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAA 311
consensus_12379#1      TTGCAGCAGTCGTTTCAGAGGTCACAGCGCCATTGCTTTGGTGGCTCTGCTCCTGGAGAA 467
                       ************************************************************

consensus_12379#0      TTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAA 455
consensus_12379#2      TTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAA 371
consensus_12379#1      TTCCCCTTGGCTGCAAACCCATCAATTGTCCTCCATGTCCTCACATCATGCAATCTGGAA 527
                       ************************************************************

consensus_12379#0      CCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAA 515
consensus_12379#2      CCTGATGACCTCGCTCACTTGGAGGCAAGTAGTGTTTTGTTCTTCCTCTCCAATGTAGAA 431
consensus_12379#1      CCTGATGACCTCGCTCACTTGGAGGCAA-------------------------------- 555
                       ****************************                                

consensus_12379#0      TTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAA 575
consensus_12379#2      TTGATATTGCCACTGATGAAATTTGTGCTTGCGATAGGCAACATGCTCGTTTTTCCGGAA 491
consensus_12379#1      -----------------------------------------CATGCTCGTTTTTCCGGAA 574
                                                                *******************

consensus_12379#0      GCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATAT 635
consensus_12379#2      GCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATAT 551
consensus_12379#1      GCCTGCCAATTTCCCTCCCGATTTTCAGTTGTCAATGTCAGAACTCGCAGCGTTGGATAT 634
                       ************************************************************

consensus_12379#0      GTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCA 695
consensus_12379#2      GTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCA 611
consensus_12379#1      GTGCCAGAAACGGGCGATATTTAAACCTATGACTCAACAAGAAAGAGAAATGTTTAAGCA 694
                       ************************************************************

consensus_12379#0      ACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTG 755
consensus_12379#2      ACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTG 671
consensus_12379#1      ACGTTGCGGCGGGAGTTGGAAGCTGGTTCTTAGGTTTATAATGGCAGGTGAAGCATGTTG 754
                       ************************************************************

consensus_12379#0      CCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAAACAG 815
consensus_12379#2      CCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAG 731
consensus_12379#1      CCGGAGGGAAAAATCTCAGGCAATCGCTGGACCTGGTCACAGCATCGCTGTGACAACAAG 814
                       ********************************************************  **

consensus_12379#0      CGGTGCAGTGTATACTTTTGGGTCCAACAGCTCTGGTCAACTTGGGCCATGGTAAGTTGT 875
consensus_12379#2      CGGTGCAGTGTATACTTTTGGGT------------------------------------- 754
consensus_12379#1      CGGTGCAGTGTATACTTTTGGGT------------------------------------- 837
                       ***********************                                     

consensus_12379#0      AGAAGAAGGAGTGGGAAGGNCACGGAATTAATCAGA 911
consensus_12379#2      ------------------------------------
consensus_12379#1      ------------------------------------
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)