These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12381#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1644 fasta sequence [AACACACATCATTTT-GTTTACCAAACACACTGAAACACGGAGCAATGGCGGCTTTGCTCCTTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCTCCTCGCACACTCACGACGCTGCCTCCCGCCGGGACCCCGTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCGCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGT-CGCCCGCGAGTTCCTGCAGAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCTGGCTGCCCCCCGGGCCGCGGTGGCGC-GAGCTCCGCAAGATCATGGCGACGGAGCTGTTCTCCACGCGCCGGCTCGACGCGCTCCACGAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCGACCACGTGGCGGGTCTGGCGCGCGACGGCACGGCGGTGGACATCGGCCGCGTGGCGTTCACCACGAGCCTGAACCTCGTCGCGCGCACCATCTTCTCGCACGACCTGACGAGCCTCGACGACCACGGCGCGTCGAAGGAGTTCCAGCGACTGATCACGGACGTCATGGAGGCAGTCGGCAGCCCGAACCTGTCGGACTTCTTCCCCGCGCTCGCCGCCGTCGACCTGCAGGGCTGGCGCCGGCGGCTGTCTGGGCTGTTTGCGCGGCTGCACCGGCTGTTCGACGCCGAGATGGACCATCGCAGGCTGCACGGAATGAAGGAGAAGGACGGCGACTTCCTGGAGGTGCTCCTGAGGCTCGCCGCGCGGGACGACGACACGGCGAGGCTCGACGGCGACACGCTCCGGTCACTGTTCACGGACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTACGAGGACGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGTGTGGGCCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTACTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGGTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGCACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGAATAGTTTTGTAAATTTCTGGGTA] [+] EMBL AK108519 [AACACACATCATTTT GTTTACCAAACACACTGAAACACGGAGCAATGGCGGCTTTGCTCCTTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCTCCTCGCACACTCACGACGCTGCCTCCCGCCGGGACCCCGTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCGCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGT CGCCCGCGAGTTCCTGCAGAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCTGGCTGCCCCCCGGGCCGCGGTGGCGC GAGCTCCGCAAGATCATGGCGACGGAGCTGTTCTCCACGCGCCGGCTCGACGCGCTCCACGAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCGACCACGTGGCGGGTCTGGCGCGCGACGGCACGGCGGTGGACATCGGCCGCGTGGCGTTCACCACGAGCCTGAACCTCGTCGTGCGCACCATCTTCTCGCACGACCTGACGAGCCTCGACGACCACGGCGCGTCGAAGGAGTTCCAGCGACTGATCACGGACGTCATGGAGGCAGTCGGCAGCCCGAACCTGTCGGACTTCTTCCCCGCGCTCGCCGCCGTCGACCTGCAGGGCTGGCGCCGGCGGCTGTCTGGGCTGTTTGCGCGGCTGCACCGGCTGTTCGACGCCGAGATGGACCATCGCAGGCTGCACGGAATGAAGGAGAAGGACGGCGACTTCCTGGAGGTGCTCCTGAGGCTCGCCGCGCGGGACGACGACACGGCGAGGCTCGACGGCGACACGCTCCGGTCACTGTTCACGGACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTACGAGGACGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGTGTGGGCCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTACTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGGTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGCACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGA ] [+] EMBL CB669329 [ ATTTTAGTTTACCACACACACTGAAACACGGAGCAATGGCGGCTTTGCTCCTTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCTCCTCGCACACTCACGACGCTGCCTCCCGCCGGGACCCCGTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCGCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGT CGCCCGCGAGTTCCTGCAGAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCCGGCTGCCCCCCGGGCCGCGGTGGCGCTGAGCTCCGCAAGATCATGGCGACGGAGCTGTTCTCCACGCGCCGGCTCGACGCGCTCCACGAGCTCCGGAAAGAGAAGGTGGCGGAGCTCGTCGACCACGTGGCGGGTCTGGCGCGCGACGGCACGGCGGTGGACATCCGCCGCGTGGAGTTCACCACGAGCCTGAACCTCGTCGCGCGCACCATCTTCTCGCACGATCTGA ] [+] EMBL CB671858 [ ACCAAACACACTGAAACACGGAGCAATGGCGGCTTTGCTCCTTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCTCCTCGCACACTCACGACGCTGCCTCCCGCCGGGACCCCGTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCGCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGT CGCCCGCGAGTTCCTGCAGAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCTGGCTGCCCCCCGGGCCGCGGTGGCGC GAGCTCCGCAAGATCATGGCGACGGAGCTGTTCTCCACGCGCCGGCTCGACGCGCTCCACGAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCGACCACGTGGCGGGTCTGGCGCGCGACGGCACGGCGGTGGACATCGGCCGCGTGGCGTTCACCACGAGCCTGAACCTCGTCGCGCGCACCATCTTCTCGCACGACCTGACGAGCCTCGACGACCACGGCGCGTCGAAGGAGTTCCAGCGACTGATCACGGACGTCATGGAGGCAGTCGGCAGCCCGAACCTGTCGGACTTCTTCCCCGCGCTCGCCGCCGTCGACCTGCAAGGCTGGCGCCGGCGGCTGTCTGGGCTGTTT ] [+] EMBL CB669410 [ cACACACTGAAACACGGAGCAATGGCGGCTTTGCTCCTTTGGCTGTCATGGCTTCTAATCTCCCTCCTCTCCATCTACCTCCTCGACCTCCTCGCACACTCACGACTCTGCCTCCCGCCGGGACCCCGTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCCCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGTGCGCCCGCGAGTTCCTGCACAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCCGGCTGCCCCCCGGGCCGCGGTGGCGC GAGCTCCGCAAGATCATGGCGACAGAGCTGTTCTCCACACGCCGGCTCGACGCGCTCCACGAGCTCC ] [+] EMBL CB647542 [ CGGGACCCCCTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCGCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGT CGCCCGCGAGTTCCTGCAGAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCTGGCTGCCCCCCGGGCCGCGGTGGCGC GAGCTCCGCAAGATCATGGCGACGGAGCTGTTCTCCACGCGCCGGCTCGACGCGCTCCACGAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCCACCACGTGGCGGGTCTGGCGCGCGACGGCACGGCGGTGGACATCGGCCGCGTGGCGTTCCCCACGAGCCTGAACCTCGTCGCGCGCACCATCTTCTCGCACGACCTGACGAGCC ] [-] EMBL CB669330 [ GGCGAGGCTCGACGGCGACACGCTCCGGTCACTGTTCACGGACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTACGAGGACGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGTGTGGGCCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTACTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGGTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGCACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGAA ] [-] EMBL CB647543 [ AATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTACGAGGACGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGTGTGGGCCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTACTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGGTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGCACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGAATAGTTTTGTAAATTTCTGGGTA] consensusID : consensus_12381#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 778 fasta sequence [GCGCGGGACGACGACACGGCGAGGCTCGACGGCGACACGCTCCGGTCACTGTTCACGGACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGTTAAAATATGCGATGAGATAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGTCTGCATTCTCCAGCTCCGTTATTATTACCACGTCAAGGTACGAGGAGGATCCAAATAATGGGTTATACAATACCTAAAGGTTCTAGAGTGTTAATAAACGTGTGGGCCATGGGTGGAGACGAAGATATATGTCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGGCAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTCCTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGCTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGTGTGTGACTTTAGCAAAAGCCAATCATTTATGTGGGATGGCCGCACCAACGTAAGTCAATCAGGCTTTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGAATAGTTTCGTACAAAAAAGGG] [-] EMBL CB669411 [GCGCGGGACGACGACACGGCGAGGCTCGACGGCGACACGCTCCGGTCACTGTTCACGGACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGTTAAAATATGCGATGAGATAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGTCTGCATTCTCCAGCTCCGTTATTATTACCACGTCAAGGTACGAGGAGGATCCAAATAATGGGTTATACAATACCTAAAGGTTCTAGAGTGTTAATAAACGTGTGGGCCATGGGTGGAGACGAAGATATATGTCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGGCAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTCCTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGCTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGTGTGTGACTTTAGCAAAAGCCAATCATTTATGTGGGATGGCCGCACCAACGTAAGTCAATCAGGCTTTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGAATAGTTTCGTACAAAAAAGGG] consensusID : consensus_12381#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 717 fasta sequence [GACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTACGAGGACGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGTGTGGGCCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTACTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGGTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGCACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAAAAGGATTATTGGTGCAAATAAATGAATAGTTTTTCCTTAAAGGA] [-] EMBL CB685427 [GACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTGCTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGTTGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAAGAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTACGAGGACGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGTGTGGGCCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCCTAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTACTTCTTGCATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGTAGAAGGAAATAGAATTGATATGACGGAGAAGTTTGGTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGCACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGGAAACATTCCATCAGGAAAAGGATTATTGGTGCAAATAAATGAATAGTTTTTCCTTAAAGGA] consensusID : consensus_12381#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence [ACCCCCTTAATGAAACACGGAGCAATGGCGGCTTTGCTCCTTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCTCCTCGCACACTCACGACGCTGCCTCCCGCCGGGACCCCGTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCGCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGTCGCCCGCGAGTTCCTGCAGAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCTGGCTGCCCCCCGGGCCGCGGTGGCGCGAGCTCCGCAAGATCATGGCGACGGAGCTGTTCTCCACGCGCCGGCTCGACGCGCTCCACGAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCGACCACGTGGCGGGTCTGGCGCGCGACGGCACGGCGGTGGACATCGGCCGCGTGGCGTTCACCACGAGCCTGAACCTCACCGCGCGCACCATCTTCTCG] [+] EMBL CB685426 [ACCCCCTTAATGAAACACGGAGCAATGGCGGCTTTGCTCCTTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCTCCTCGCACACTCACGACGCTGCCTCCCGCCGGGACCCCGTCCGCTGCCGCTGATCGGCAGCCTCCACCTGCTCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGACTTACGGCCCTCTCATGTCGCTCCGCCTTGGCGCTGTCACCACGGTGGTCGCCTCCTCGCCGGAGGTCGCCCGCGAGTTCCTGCAGAAGCACGACGCCGTCTTCGCCACCCGTTCAACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCGTCGCCTGGCTGCCCCCCGGGCCGCGGTGGCGCGAGCTCCGCAAGATCATGGCGACGGAGCTGTTCTCCACGCGCCGGCTCGACGCGCTCCACGAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCGACCACGTGGCGGGTCTGGCGCGCGACGGCACGGCGGTGGACATCGGCCGCGTGGCGTTCACCACGAGCCTGAACCTCACCGCGCGCACCATCTTCTCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12381#0 ------------------------------------------------------------ consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 GCGCGGGACGACGACACGGCGAGGCTCGACGGCGACACGCTCCGGTCACTGTTCACGGAC 60 consensus_12381#2 ---------------------------------------------------------GAC 3 consensus_12381#0 --AACACACATCATTTTGTTTACCAAACACACTGAAACACG--GAGCAATGGCGGCTTTG 56 consensus_12381#3 ---------------------ACCCC-CTTAATGAAACACG--GAGCAATGGCGGCTTTG 36 consensus_12381#1 TTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTG 120 consensus_12381#2 TTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGCCGAATTG 63 ** * * * * ******** * *** consensus_12381#0 CTCC----TTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCT 112 consensus_12381#3 CTCC----TTTGGCTGTCATGGCTTCTACTCTCCCTCCTCTCCATCTACCTCCTCGACCT 92 consensus_12381#1 CTACAGAACCCAATATCAATGGTTAAAATATGCGATGAGATAAGACGAGTTGTTGGGTCA 180 consensus_12381#2 CTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGTTGGGTCA 123 ** * **** * * * * * * * * * * consensus_12381#0 CCTCGCACACTC-ACGACGCTGCCTCCCGCCGGG-ACCCCGTCCGCT-GCCGC--TGATC 167 consensus_12381#3 CCTCGCACACTC-ACGACGCTGCCTCCCGCCGGG-ACCCCGTCCGCT-GCCGC--TGATC 147 consensus_12381#1 AGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAA 240 consensus_12381#2 AGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGTCATAAAA 183 * * * * * ** *** * * *** * ** ** * * * consensus_12381#0 GGCAGCCTCCACCTGC-TCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGAC 226 consensus_12381#3 GGCAGCCTCCACCTGC-TCGGCGACCTGCCACACCGCTCGCTCGCCGGCCTCGCCAAGAC 206 consensus_12381#1 GAAACATTTCGTCTGCATTCTCCAGCTCCGTTATTATTACCACGTCAAGGTA--CGAGGA 298 consensus_12381#2 GAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTA--CGAGGA 241 * * * * **** * * * ** * * * * ** * * * ** consensus_12381#0 TTACGGCCCTCTCATGTCGCTCCGC-CTTGGCGCTGTCACCACGGTGGTCGCCTCCTCG- 284 consensus_12381#3 TTACGGCCCTCTCATGTCGCTCCGC-CTTGGCGCTGTCACCACGGTGGTCGCCTCCTCG- 264 consensus_12381#1 GGATCCAAATAATGGGTTATACAATACCTAAAGGTTCTAGAGTGTTAATAAACGTGTGGG 358 consensus_12381#2 CGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGTGTGGG 301 * * ** * * * * * * * * * * * * consensus_12381#0 CCGGAGGTCGCC-CGCGAGTTCCTG--CAGAAGCACGACGCCGTCTTCGCCACCCGTTCA 341 consensus_12381#3 CCGGAGGTCGCC-CGCGAGTTCCTG--CAGAAGCACGACGCCGTCTTCGCCACCCGTTCA 321 consensus_12381#1 CCATGGGTGGAGACGAAGATATATGTCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCC 418 consensus_12381#2 CCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAGATTCC 361 ** *** * ** * ** ******* ** * *** * *** consensus_12381#0 ACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCG---TCGCCTGGCTGCCCCCCGGG 398 consensus_12381#3 ACCCCCGACGCCACCGGTGACCACGCCAGGAACTCCG---TCGCCTGGCTGCCCCCCGGG 378 consensus_12381#1 -TAGAAAGGGCAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGA 477 consensus_12381#2 -TAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGCGGGA 420 * * * ** * * * * * * ** * * * ** consensus_12381#0 CCGCGGTGGCGC----GAGCTCCGCAAGATCATGGCGACGGAGC-TGTTCTCCACGCGCC 453 consensus_12381#3 CCGCGGTGGCGC----GAGCTCCGCAAGATCATGGCGACGGAGC-TGTTCTCCACGCGCC 433 consensus_12381#1 CGACGAATCTGCCCTGGAATGCCATTAGCTGTTAG-GATGGTGCATGTCCTTCTTGCATC 536 consensus_12381#2 CGACGAATCTGCCCTGGAATGCCATTAGCTGTTAG-GATGGTGCATGTACTTCTTGCATC 479 * ** ** ** ** ** * * * ** ** ** *** ** * ** * consensus_12381#0 GGC-TCGACGCGCTCCAC-----GAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCGACC 507 consensus_12381#3 GGC-TCGACGCGCTCCAC-----GAGCTCCGGCAAGAGAAGGTGGCGGAGCTCGTCGACC 487 consensus_12381#1 CCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGCTAGAAGGAAATAGAATTGATA 596 consensus_12381#2 CCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGG-TAGAAGGAAATAGAATTGATA 538 * * * * * ** ** ** * * * * * ** consensus_12381#0 ACGTGGCGGGTCTGGCGCGCGACGGCA-CGGCGGTGGACATCGGCCGCGTGGCGTTCACC 566 consensus_12381#3 ACGTGGCGGGTCTGGCGCGCGACGGCA-CGGCGGTGGACATCGGCCGCGTGGCGTTCACC 546 consensus_12381#1 TGACGGAGAAGTTTGTGTGTGACTTTAGCAAAAGCCAATCATTTATGTGGGATGGCCGC- 655 consensus_12381#2 TGACGGAGAAGTTTG-GTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGC- 596 ** * * * * * *** * * * * * * * * * * consensus_12381#0 ACGAGCCTGAACC--TCG-----TCGCGCGCACCATCTTCTCGCACGACCTGACGAGCCT 619 consensus_12381#3 ACGAGCCTGAACC--TCA-----CCGCGCGCACCATCTTCTCG----------------- 582 consensus_12381#1 ACCAACGTAAGTCAATCAGGCTTTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGG 715 consensus_12381#2 ACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGG 656 ** * * * * * ** * * * * * * * * consensus_12381#0 CGACGACCACGGCGCGTCGAAGGAGTTCCAGCGACTGATCACGGACGTCATGGAGGCAGT 679 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 AAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGAATAGTTTCGTACAAAAAA 775 consensus_12381#2 AAACATTCCATCAGGAAAAGGATTATTGGTGCAAATAAATGAATAGTTTTTCCTTAAAGG 716 consensus_12381#0 CGGCAGCCCGAACCTGTCGGACTTCTTCCCCGCGCTCGCCGCCGTCGACCTGCAGGGCTG 739 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 GGG--------------------------------------------------------- 778 consensus_12381#2 A----------------------------------------------------------- 717 consensus_12381#0 GCGCCGGCGGCTGTCTGGGCTGTTTGCGCGGCTGCACCGGCTGTTCGACGCCGAGATGGA 799 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 CCATCGCAGGCTGCACGGAATGAAGGAGAAGGACGGCGACTTCCTGGAGGTGCTCCTGAG 859 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 GCTCGCCGCGCGGGACGACGACACGGCGAGGCTCGACGGCGACACGCTCCGGTCACTGTT 919 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 CACGGACTTGTTTACTGCAGGTAGTGACACAAGTTCTAGCACAGTAGAATGGGCAATGGC 979 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 CGAATTGCTACAGAACCCAATATCAATGGCTAAACTATGCGATGAGCTAAGACGAGTTGT 1039 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 TGGGTCAAGAAGAAGAATTGAAGAATCTGAAATTGGTCAATTGCCCTATTTGCAAGCTGT 1099 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 CATAAAAGAAACATTTCGACTGCATTCACCAGCTCCGTTATTATTACCACGGCAAGCTAC 1159 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 GAGGACGATCCAAATAATGGGTTATACAATACCTAAAGGTACTAGAGTGTTAATAAACGT 1219 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 GTGGGCCATGGGTCGAGACGAAGATATATGGCCAGAAGCGGGAAAGTTTATTCCGGAGAG 1279 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 ATTCCTAGAAAGGACAATTGACTACAAAGGTGGAGATTTGGAGCTCATCCCATTTGGTGC 1339 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 GGGACGACGAATCTGCCCTGGAATGCCATTAGCTGTTAGGATGGTGCATGTACTTCTTGC 1399 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 ATCCCTGTTAATTCATTTTAAATGGAGACTCCCAGCTGAGGTAGAAGGAAATAGAATTGA 1459 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 TATGACGGAGAAGTTTGGTGTGACTTTAGCAAAAGCCAATCATTTATGTGCGATGGCCGC 1519 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 ACCAACGTAAGTCAATCAGGCTCTTGTGGGTAAAAAGTAATAGATTGCCTTTACAAATGG 1579 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 AAACATTCCATCAGGAATGTGATTATTGGTGCAAATAAATGAATAGTTTTGTAAATTTCT 1639 consensus_12381#3 ------------------------------------------------------------ consensus_12381#1 ------------------------------------------------------------ consensus_12381#2 ------------------------------------------------------------ consensus_12381#0 GGGTA 1644 consensus_12381#3 ----- consensus_12381#1 ----- consensus_12381#2 ----- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||