cluster # 1239

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Oryza sativa
cluster # 1239 cluster # 1239 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1239#0 length = 815 sequences # 2

consensusID : consensus_1239#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 815
fasta sequence

                              [GAGGACCTGGTGGAGAAGGGTAGGGCTTGGGTGCTGGCGCTCGCGGCGGCCGTGGTGGCCGCGGCGAGGAGGTTCTTCCACTGGGTGGTGTCCGGGGACTGGATGAGCTGGTGGCCCTTCTGGCGGCCCGACCGGCGACTGCAGCGGCTGATCGACGACGCGGACGCCAACCCCGC-GGATCCCGCCAAGCAGAGCGCGCTGCTCCACGAGCTCAACAAGTTCAGCCCAGAAGATGTCATCAAAAGGTTCGAGCAAAGAAGCCATGCTGTGGACAGCAGAGGTGTTGCAGAATACCTTCGGGCTCTTATTCTCACCAATGGCATAGCTGATTACCTTCCAGACGAACAGTCTGGGAGGTCTGCAAGTCTGCCAGCCCTGCTGCAAGAATTGAAGCAACGTGTATCTGGGAACGAGGACAAGCCTTTCATGAATCCCGGCATATCAGAAAAGCAACCATTACATGTAGTTATGGTTGACCCTAAAGCTACAGGTAGATCAACCCGGTTTGCTCAAGAAATCTTCTCGACTGTGCTGTTTACAATTGCTGTTGGACTAATGTGGGTAATGGGTGCTGCTGCTCTTCAAAAGTATATTGGTAGCTTAGGTGGAATAGGGGCATCTGGTGTTGGTTCCAGTTCATCATATTCTCCTAAAGAATTGAATAAGGATATCATGCCGGAGAAGAATGTCAAGACATTTAAAGATGTCACAGGGTGTGATGCACGCAAGAAAGAACTCGAGGAGGTAGTTGAGTATCTAAAAAACCCCTTCAAGTTTACTCGGCTTGGTGGAAAACTACCGAAGGGAATACTTTT]

[+] EMBL CB668377             [GAGGACCTGGTGGAGAAGGGTAGGGCTTGGGTGCTGGCGCTCGCGGCGGCCGTGGTGGCCGCGGCGAGGAGGTTCTTCCACTGGGTGGTGTCCGGGGACTGGATGAGCTGGTGGCCCTTCTGGCGGCCCGACCGGCGACTGCAGCGGCTGATCGACGACGCGGACGCCAACCCCGC GGATCCCGCCAAGCAGAGCGCGCTGCTCCACGAGCTCAACAAGTTCAGCCCAGAAGATGTCATCAAAAGGTTCGAGCAAAGAAGCCATGCTGTGGACAGCAGAGGTGTTGCAGAATACCTTCGGGCTCTTATTCTCACCAATGGCATAGCTGATTACCTTCCAGACGAACAGTCTGGGAGGTCTGCAAGTCTGCCAGCCCTGCTGCAAGAATTGAAGCAACGTGTATCTGGGAACGAGGACAAGCCTTTCATGAATCCCGGCATATCAGAAAAGCAACCATTACATGTAGTTATGGTTGACCCTAAAGCTACAGGTAGATCAACCCGGTTTGCTCAAGAAATCTTCTCGACTGTGCTGTTTACAATTGCTGTTGGACTAATGTGGGTAATGGGTGCTGCTGCTCTTCAAAAGTATATTGGTAGCTTAGGTGGAATAGGGGCATCTGGTGTTGGTTCCAGTTCATCATATTCTCCTAAAGAATTGAATAAGGATATCATGCCGGAGAAGAATGTCAAGACATTTAAAGATGTCACAGGGTGTGATGCACGCAAGAAAGAACTCGAGGAGGTAGTTGAGTATCTAAAAAACCCCTTCAAGTTTACTCGGCTTGGTGGAAAACTACCGAAGGGAATACTTTT]
[+] EMBL CB640159             [                       GGCTTGGGTGCTGGCGCTCGCGGCGGCCGTGGTGGCCGCGGCGAGGAGGTTCTTCGACTGGGTGGTGTCCGGGGACTGGATGAGCTGGTGGCCCTTCTGGCGGCCCGACCGGCGACTGCAGCGGCTGATCGACGACGCGGACGCCAACCCCTCTGTATCCCGCCAAGCAGAGCGCTCTGCTCCACGAGCTCAACAAGTTCAGCCCAGAAGATGTCATCAAAAGGTTCGAGCAAAGAAGCCATGCTGTGGACAGCAGAGGTGTTGCAGAATACCTTCGGGCTCTTATTCTCACCAATGGCATAGCTGATTACCTTCCAGACGAACAGTCTGGGAGGTCTGCAAGTCTGCCAGCCCTGCTGCAAGAATTGAAGCAACGTGTATCTGGGAACGAGGACAAGCCTTTCATGAATCCCGGCATATCAGAAAAGCAACCATTACATGTAGTTATGGTTGACCCTAAAGCTACAGGTAGATCAACCCGGTTTGCTCAAGAAATCTTCTCGACTGTGCTGTTTACAATTGCTGTTGGACTAATGTGGGTAATGGGTGCTGCTGCTCTTC AAAGTA                                                                                                                                                                                                                                 ]




>consensus_1239#0
GAGGACCTGGTGGAGAAGGGTAGGGCTTGGGTGCTGGCGCTCGCGGCGGCCGTGGTGGCC
GCGGCGAGGAGGTTCTTCCACTGGGTGGTGTCCGGGGACTGGATGAGCTGGTGGCCCTTC
TGGCGGCCCGACCGGCGACTGCAGCGGCTGATCGACGACGCGGACGCCAACCCCGCGGAT
CCCGCCAAGCAGAGCGCGCTGCTCCACGAGCTCAACAAGTTCAGCCCAGAAGATGTCATC
AAAAGGTTCGAGCAAAGAAGCCATGCTGTGGACAGCAGAGGTGTTGCAGAATACCTTCGG
GCTCTTATTCTCACCAATGGCATAGCTGATTACCTTCCAGACGAACAGTCTGGGAGGTCT
GCAAGTCTGCCAGCCCTGCTGCAAGAATTGAAGCAACGTGTATCTGGGAACGAGGACAAG
CCTTTCATGAATCCCGGCATATCAGAAAAGCAACCATTACATGTAGTTATGGTTGACCCT
AAAGCTACAGGTAGATCAACCCGGTTTGCTCAAGAAATCTTCTCGACTGTGCTGTTTACA
ATTGCTGTTGGACTAATGTGGGTAATGGGTGCTGCTGCTCTTCAAAAGTATATTGGTAGC
TTAGGTGGAATAGGGGCATCTGGTGTTGGTTCCAGTTCATCATATTCTCCTAAAGAATTG
AATAAGGATATCATGCCGGAGAAGAATGTCAAGACATTTAAAGATGTCACAGGGTGTGAT
GCACGCAAGAAAGAACTCGAGGAGGTAGTTGAGTATCTAAAAAACCCCTTCAAGTTTACT
CGGCTTGGTGGAAAACTACCGAAGGGAATACTTTT

clustalw multiple alignements is not computed in this case