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Oryza sativa
cluster # 124 cluster # 124       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_124#0 length = 2713 sequences # 2  

consensusID : consensus_124#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2713
fasta sequence
                              [CTTTGCCGCAACACGAGAGAGGAAGGAATCCCTCACGCCGTTCTCGTCTCGCCGTCGGCGCGGCGTGACGGCGTCGCGATGGACCCCGCCGCCGCTGCCGCCGCCGGCGGCGGCGCCGGTCCAAAATCTGATGCGGCCCCTTCCGCACCGGCGCTGCACGGCCTGCCGGTGGAGATGACGACGGGGGAGATGGAGGCCGCCATCGCCGCCCTCCCCGCGAAGAAGGAGGCGCTGCGCGAGGCCTTCGACGTCCTCGCCGCCTGCTCGCCCTTCCCGCTCCCCTTCGCCTGGGGCGACCTCGACTCCTACATCTCCTCGCTCCAGTCGTCGATCGACCGGCGGTTCGGCCAGCTCCGGGTCCTCGAGGCGGCCCGCCCCGCGCTTGCAGGTCCCGCCGCCGCCTCCACAAGCGACGGCGAGAAGGGCGGGAAGCAGGAAGAGGACAGCGACGAGGAGGAGAAAGAGGAGGAGGAGGAAGAGGTTGAGGAGGAAGAAGTTGAGGAAGAGGAGGAGATTGAGGAGGAAGAGGTCGAGGAGGAGATTGAGGAGGAAGAAGAGGAGATTGAGGAGGAGGAAGAGGAAGTCAGAGAAGAGGTTCAGGAGGCCGGGGAGGAGGTCGACGAGGAGCAGCAGGGAGCCAACGAGGAGATGCAGAAGTCCAAAGAAGATGCTGATGAGTCTTCCAAGAGTGCGATTCCAGTGCAGAAACAGGAAGAGGATGAGGCAGAGAAGGAGATAATTGAGGCCAAAGATGAGGAGCAACATGGGGACAAGCTGGCCTCTCAAGAACACGACATTGGGGAGAATGGGGATGTGGATGCCCAAGGGGTTCAGCAGGTGGCTGACGGTGAGACAATGGAGGCCAAATCGGAGGAGCAAAATGAGGCTAAGGTGACATCTATGGAGCATGACATCGAGGAGGGCGACGAGAAAGCGTCTCGAGAACAAGGCAATCGAGCTCTTCCAAGTTGCAGCGATCATCTTAGGGGAGTGTGTGCTGGCATGGACGTCAGGGGGCTGTTGAAATTGGTGTGTAAGAACCAGAGCATTTGCCTCTGGCATGAGTACCCCGTGGTGATGCGCCATGCCCCAGATGCTGCTGCCCTTGTCCTCCAAGTCGTCCAGGGTTTCCTTCTCAGCAAGAAGATGAAGACCACCAAGGTTTGGGGTAACTGTGTTGGGCTGATTCGGTGCTTACCTGCAGTGAATGCCTCGCTGTCCTCAGACACAATGAAGCAGGCCAAGCAGCTGGCGAAGGATTGGAAGGAGATGATTGACAGCACTGGAAGCAGCAGGGACGTTTTGAACCTGTCCTCCTGGGGCCTCCTGTATTTTCTCATTTCTTACAACATTGTATCGGAGTTTTCTGTTGATGAGATCTTCTGTATCTTTGGTACTCTTTCACGCAAACAACAGAAAAAGAACTGCATCGAACTCTGCAAAGGTCTTGGGCCTGTCAATAGGATCACTGACTTAATTGATTATTTGATTGGAAATGGTCAACAACTCGAAGCCTTACTGTTAACACAAGCTTTTAATTTGATAGACAAATATACTCCACTTTCTCTTCTGAAGGGATATGTTGAAAGGGCAAAACAGAATGCTCTGGATATAATTAATATGAATTCTCCACGCAAGTCTCTGAGTCCACTTATAACGAAGGAGGTGGATAGTCTAATGGTTGCACAGAACATAGTTCAACAGCAGATCACTGATTTCAACGTGCGCAGTGGTATGCTGGCAGAAATGAAGAAATTATTAGATCAATATGCAACGAAGCGAAGTTCAGGGGATGCTTGTTCTGCCTCAACTTCAAATTCAGAGCAGCAGCAGCAGCAGCAGCAAAAGCATACAAACAAGAAGCGCAAGAGAGAGCAGCTCGAGCAGCAACAGCACAGGGGACAAGAGATCCAGCAGCAGAAGCAACAGATTAAACCACAAGGGAAGAAGGGGCAGCAGCAAACTAAGCCAGAACAGAAGAAGCAACAACAGCTAAACACAAATAAGCCTCAAGAGCAACAACAACAGCAGCAGCAGAAGCAACAAATTAAGCCGCAAGAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAGCAGCAGCAGCAACAAAAGACAAATAGGCCTCAAGAACAACAGCATAAGAAGCCACGGAAAAAACAGCAGCAGCAACAACAACAACAGCAAAGTAAGCCACAAGAGAAACGCCCAAGGCCATGCACCACCAAGCTGCCAACACCATCTATCCCTGCTTCCATATCACCTATGGTTCCGCATATTGTGCAGGTTGATTCTGTTGGGCATTCACCATATGCTGCAATGCCTATATCTCACACTTATGCTGCCCAACTAGGTTGGCCTGGAAATCAGAGCGCTGCATTTGCACAAAATGTTGGAGTTTCTCAATTTATGGGTATGTTTAATCCCCAACAGCCTAATTATCCCTTCTACCGTCATCCACCGTTCTATCCCAGGTAGCACTTGCTGCAATGGGTTGTTGAGTAAACTAGAGAAAGATATAGATGCTTACAGGAGTTTTCCTCTTGAATTGTGTTGGCTCAATTGCCTCATGTTGTGTTGGACATTTATTTACATTAACATGTATATACAATTTTGGCCATTCTCTTTGTTGTAATAGCTTTTCAATAGTTCTGCCCTTTGAAGGTGCAGCTTGTCGATTTAAGTGACAGTTGACATGCTCCTTGTTTCGTTTGTT]

[+] EMBL AK120221             [CTTTGCCGCAACACGAGAGAGGAAGGAATCCCTCACGCCGTTCTCGTCTCGCCGTCGGCGCGGCGTGACGGCGTCGCGATGGACCCCGCCGCCGCTGCCGCCGCCGGCGGCGGCGCCGGTCCAAAATCTGATGCGGCCCCTTCCGCACCGGCGCTGCACGGCCTGCCGGTGGAGATGACGACGGGGGAGATGGAGGCCGCCATCGCCGCCCTCCCCGCGAAGAAGGAGGCGCTGCGCGAGGCCTTCGACGTCCTCGCCGCCTGCTCGCCCTTCCCGCTCCCCTTCGCCTGGGGCGACCTCGACTCCTACATCTCCTCGCTCCAGTCGTCGATCGACCGGCGGTTCGGCCAGCTCCGGGTCCTCGAGGCGGCCCGCCCCGCGCTTGCAGGTCCCGCCGCCGCCTCCACAAGCGACGGCGAGAAGGGCGGGAAGCAGGAAGAGGACAGCGACGAGGAGGAGAAAGAGGAGGAGGAGGAAGAGGTTGAGGAGGAAGAAGTTGAGGAAGAGGAGGAGATTGAGGAGGAAGAGGTCGAGGAGGAGATTGAGGAGGAAGAAGAGGAGATTGAGGAGGAGGAAGAGGAAGTCAGAGAAGAGGTTCAGGAGGCCGGGGAGGAGGTCGACGAGGAGCAGCAGGGAGCCAACGAGGAGATGCAGAAGTCCAAAGAAGATGCTGATGAGTCTTCCAAGAGTGCGATTCCAGTGCAGAAACAGGAAGAGGATGAGGCAGAGAAGGAGATAATTGAGGCCAAAGATGAGGAGCAACATGGGGACAAGCTGGCCTCTCAAGAACACGACATTGGGGAGAATGGGGATGTGGATGCCCAAGGGGTTCAGCAGGTGGCTGACGGTGAGACAATGGAGGCCAAATCGGAGGAGCAAAATGAGGCTAAGGTGACATCTATGGAGCATGACATCGAGGAGGGCGACGAGAAAGCGTCTCGAGAACAAGGCAATCGAGCTCTTCCAAGTTGCAGCGATCATCTTAGGGGAGTGTGTGCTGGCATGGACGTCAGGGGGCTGTTGAAATTGGTGTGTAAGAACCAGAGCATTTGCCTCTGGCATGAGTACCCCGTGGTGATGCGCCATGCCCCAGATGCTGCTGCCCTTGTCCTCCAAGTCGTCCAGGGTTTCCTTCTCAGCAAGAAGATGAAGACCACCAAGGTTTGGGGTAACTGTGTTGGGCTGATTCGGTGCTTACCTGCAGTGAATGCCTCGCTGTCCTCAGACACAATGAAGCAGGCCAAGCAGCTGGCGAAGGATTGGAAGGAGATGATTGACAGCACTGGAAGCAGCAGGGACGTTTTGAACCTGTCCTCCTGGGGCCTCCTGTATTTTCTCATTTCTTACAACATTGTATCGGAGTTTTCTGTTGATGAGATCTTCTGTATCTTTGGTACTCTTTCACGCAAACAACAGAAAAAGAACTGCATCGAACTCTGCAAAGGTCTTGGGCCTGTCAATAGGATCACTGACTTAATTGATTATTTGATTGGAAATGGTCAACAACTCGAAGCCTTACTGTTAACACAAGCTTTTAATTTGATAGACAAATATACTCCACTTTCTCTTCTGAAGGGATATGTTGAAAGGGCAAAACAGAATGCTCTGGATATAATTAATATGAATTCTCCACGCAAGTCTCTGAGTCCACTTATAACGAAGGAGGTGGATAGTCTAATGGTTGCACAGAACATAGTTCAACAGCAGATCACTGATTTCAACGTGCGCAGTGGTATGCTGGCAGAAATGAAGAAATTATTAGATCAATATGCAACGAAGCGAAGTTCAGGGGATGCTTGTTCTGCCTCAACTTCAAATTCAGAGCAGCAGCAGCAGCAGCAGCAAAAGCATACAAACAAGAAGCGCAAGAGAGAGCAGCTCGAGCAGCAACAGCACAGGGGACAAGAGATCCAGCAGCAGAAGCAACAGATTAAACCACAAGGGAAGAAGGGGCAGCAGCAAACTAAGCCAGAACAGAAGAAGCAACAACAGCTAAACACAAATAAGCCTCAAGAGCAACAACAACAGCAGCAGCAGAAGCAACAAATTAAGCCGCAAGAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAGCAGCAGCAGCAACAAAAGACAAATAGGCCTCAAGAACAACAGCATAAGAAGCCACGGAAAAAACAGCAGCAGCAACAACAACAACAGCAAAGTAAGCCACAAGAGAAACGCCCAAGGCCATGCACCACCAAGCTGCCAACACCATCTATCCCTGCTTCCATATCACCTATGGTTCCGCATATTGTGCAGGTTGATTCTGTTGGGCATTCACCATATGCTGCAATGCCTATATCTCACACTTATGCTGCCCAACTAGGTTGGCCTGGAAATCAGAGCGCTGCATTTGCACAAAATGTTGGAGTTTCTCAATTTATGGGTATGTTTAATCCCCAACAGCCTAATTATCCCTTCTACCGTCATCCACCGTTCTATCCCAGGTAGCACTTGCTGCAATGGGTTGTTGAGTAAACTAGAGAAAGATATAGATGCTTACAGGAGTTTTCCTCTTGAATTGTGTTGGCTCAATTGCCTCATGTTGTGTTGGACATTTATTTACATTAACATGTATAT                                                                                                             ]
[-] EMBL CB631689             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCCGCAAGAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAGCAGCAGCAGCAACAAAAGACAAATAGGCCTCAAGAACAACAGCATAAGAAGCCACAGAAAAAACAGCAGCAGCAGCAACAACAACAGCAAAGTAAGCCACAAGAGAAACGCCCAAGGCCATGCGCCACCAAGCTGCCAACACCATCTATCCCTGCTTCCATATCACCTATGGTTCCGCATATTGTGCAGGTTGATTCTGTTGGGCATTCACCATATGCTGCAATGCCTATATCTCACACTTATGCTGCCCAACTAGGCTGGCCTGGAAATCAGAGCGCTGCATTTGCACAAAATGTTGGAGTTTCTCAATTTATGGGTATGTTTAATCCCCAACAGCCTAATTATCCCTTCTACCGTCATCCACCGTTCTATCCCAGGTAGCACTTGCTGCAATGGGTTGTTGAGTAAACTAGAGAAAGATATAGATGCTTACAGGAGTTTTCCTCTTGAATTGTGTTGGCTCAATTGCCTCATGTTGTGTTGGACATTTATTTACATTAACATGTATATACAATTTTGGCCATTCTCTTTGTTGTAATAGCTTTTCAATAGTTCTGCCCTTTGAAGGTGCAGCTTGTCGATTTAAGTGACAGTTGACATGCTCCTTGTTTCGTTTGTT]


>consensus_124#0 CTTTGCCGCAACACGAGAGAGGAAGGAATCCCTCACGCCGTTCTCGTCTCGCCGTCGGCG CGGCGTGACGGCGTCGCGATGGACCCCGCCGCCGCTGCCGCCGCCGGCGGCGGCGCCGGT CCAAAATCTGATGCGGCCCCTTCCGCACCGGCGCTGCACGGCCTGCCGGTGGAGATGACG ACGGGGGAGATGGAGGCCGCCATCGCCGCCCTCCCCGCGAAGAAGGAGGCGCTGCGCGAG GCCTTCGACGTCCTCGCCGCCTGCTCGCCCTTCCCGCTCCCCTTCGCCTGGGGCGACCTC GACTCCTACATCTCCTCGCTCCAGTCGTCGATCGACCGGCGGTTCGGCCAGCTCCGGGTC CTCGAGGCGGCCCGCCCCGCGCTTGCAGGTCCCGCCGCCGCCTCCACAAGCGACGGCGAG AAGGGCGGGAAGCAGGAAGAGGACAGCGACGAGGAGGAGAAAGAGGAGGAGGAGGAAGAG GTTGAGGAGGAAGAAGTTGAGGAAGAGGAGGAGATTGAGGAGGAAGAGGTCGAGGAGGAG ATTGAGGAGGAAGAAGAGGAGATTGAGGAGGAGGAAGAGGAAGTCAGAGAAGAGGTTCAG GAGGCCGGGGAGGAGGTCGACGAGGAGCAGCAGGGAGCCAACGAGGAGATGCAGAAGTCC AAAGAAGATGCTGATGAGTCTTCCAAGAGTGCGATTCCAGTGCAGAAACAGGAAGAGGAT GAGGCAGAGAAGGAGATAATTGAGGCCAAAGATGAGGAGCAACATGGGGACAAGCTGGCC TCTCAAGAACACGACATTGGGGAGAATGGGGATGTGGATGCCCAAGGGGTTCAGCAGGTG GCTGACGGTGAGACAATGGAGGCCAAATCGGAGGAGCAAAATGAGGCTAAGGTGACATCT ATGGAGCATGACATCGAGGAGGGCGACGAGAAAGCGTCTCGAGAACAAGGCAATCGAGCT CTTCCAAGTTGCAGCGATCATCTTAGGGGAGTGTGTGCTGGCATGGACGTCAGGGGGCTG TTGAAATTGGTGTGTAAGAACCAGAGCATTTGCCTCTGGCATGAGTACCCCGTGGTGATG CGCCATGCCCCAGATGCTGCTGCCCTTGTCCTCCAAGTCGTCCAGGGTTTCCTTCTCAGC AAGAAGATGAAGACCACCAAGGTTTGGGGTAACTGTGTTGGGCTGATTCGGTGCTTACCT GCAGTGAATGCCTCGCTGTCCTCAGACACAATGAAGCAGGCCAAGCAGCTGGCGAAGGAT TGGAAGGAGATGATTGACAGCACTGGAAGCAGCAGGGACGTTTTGAACCTGTCCTCCTGG GGCCTCCTGTATTTTCTCATTTCTTACAACATTGTATCGGAGTTTTCTGTTGATGAGATC TTCTGTATCTTTGGTACTCTTTCACGCAAACAACAGAAAAAGAACTGCATCGAACTCTGC AAAGGTCTTGGGCCTGTCAATAGGATCACTGACTTAATTGATTATTTGATTGGAAATGGT CAACAACTCGAAGCCTTACTGTTAACACAAGCTTTTAATTTGATAGACAAATATACTCCA CTTTCTCTTCTGAAGGGATATGTTGAAAGGGCAAAACAGAATGCTCTGGATATAATTAAT ATGAATTCTCCACGCAAGTCTCTGAGTCCACTTATAACGAAGGAGGTGGATAGTCTAATG GTTGCACAGAACATAGTTCAACAGCAGATCACTGATTTCAACGTGCGCAGTGGTATGCTG GCAGAAATGAAGAAATTATTAGATCAATATGCAACGAAGCGAAGTTCAGGGGATGCTTGT TCTGCCTCAACTTCAAATTCAGAGCAGCAGCAGCAGCAGCAGCAAAAGCATACAAACAAG AAGCGCAAGAGAGAGCAGCTCGAGCAGCAACAGCACAGGGGACAAGAGATCCAGCAGCAG AAGCAACAGATTAAACCACAAGGGAAGAAGGGGCAGCAGCAAACTAAGCCAGAACAGAAG AAGCAACAACAGCTAAACACAAATAAGCCTCAAGAGCAACAACAACAGCAGCAGCAGAAG CAACAAATTAAGCCGCAAGAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAGCAGCAG CAGCAACAAAAGACAAATAGGCCTCAAGAACAACAGCATAAGAAGCCACGGAAAAAACAG CAGCAGCAACAACAACAACAGCAAAGTAAGCCACAAGAGAAACGCCCAAGGCCATGCACC ACCAAGCTGCCAACACCATCTATCCCTGCTTCCATATCACCTATGGTTCCGCATATTGTG CAGGTTGATTCTGTTGGGCATTCACCATATGCTGCAATGCCTATATCTCACACTTATGCT GCCCAACTAGGTTGGCCTGGAAATCAGAGCGCTGCATTTGCACAAAATGTTGGAGTTTCT CAATTTATGGGTATGTTTAATCCCCAACAGCCTAATTATCCCTTCTACCGTCATCCACCG TTCTATCCCAGGTAGCACTTGCTGCAATGGGTTGTTGAGTAAACTAGAGAAAGATATAGA TGCTTACAGGAGTTTTCCTCTTGAATTGTGTTGGCTCAATTGCCTCATGTTGTGTTGGAC ATTTATTTACATTAACATGTATATACAATTTTGGCCATTCTCTTTGTTGTAATAGCTTTT CAATAGTTCTGCCCTTTGAAGGTGCAGCTTGTCGATTTAAGTGACAGTTGACATGCTCCT TGTTTCGTTTGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)