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Oryza sativa
cluster # 12405 cluster # 12405       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12405#0 length = 1088 sequences # 7  
consensus_12405#1 length = 642 sequences # 1  
consensus_12405#2 length = 511 sequences # 1  
consensus_12405#3 length = 437 sequences # 1  

consensusID : consensus_12405#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1088
fasta sequence
                              [TCCCTTTCCTCCTCCATTCCAACCTTCCAACCCAACAACCTCAACCCTCCTCCCTCAGTATCCCCCCAAGAACGCGAGGAGCCGAGTCCGTACTAGGCCCAGGTCATCTTTTGTTGTAGAGGCGATGCAGACGGCGGCGGCGGCGGCGGTGGCGTGGGCGCCGAGCCCATCGCCGTCCACCTCCACCTCATCGCCGCCCCCCTTCAAGGTGGGGATCGCGTCGCCGTGTGGGACGGCTGCTCACGCCTCCTCCGCGCCGAGGTTGGTTGCTGCGGCCACTCACCGGGGGCGGCGGCGGCAGCAGCAAGT-GGTTAAGGCTATTGCC-AACCCAGACCCAGCAGTTGAGCTGCCATTGACAGCTGAAAATGTTGAGATTGTATTGGATGAAGTTCGACCATACCTTATGGCAGACGGAGGAAATGTTGCATTGCATGAAATT-GATGGGAATGTGGTGAGGTTGAAGCTGCAAGGAGCATGTG-GATCATGCCCAGCTTCAGTAACAACAATGAAGAT-GGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGAC-TGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACC-TATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGCTACAATAA-TCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTACAAAAGGTTTTGGGCTTCTATGATTTTGTCTGTACATTTGTGAATATCACTCTTTTATTTGGAAGTTCGTTGAAATAGAAAAGGGCACTACATTTTAAAAAAA]

[+] EMBL AU069021             [TCCCTTTCCTCCTCCATTCCAACCTTCCAACCCAACAACCTCAACCCTCCTCCCTCAGTATCCCCCCAAGAACGCGAGGAGCCGAGTCCGTACTAGGCCCAGGTCATCTTTTGTTGTAGAGGCGATGCAGACGGCGGCGGCGGCGGCGGTGGCGTGGGCGCCGAGCCCATCGCCGTCCACCTCCACCTCATCGCCGCCCCCCTTCAAGGTGGGGATCGCNTCGCCGTGTGGGACGGCTGCTCACGNCTCCTCCGCGCCGAGGTTGGTTGCTGCGGCCACTCACCGGGGGCGGCGGCGGCANAAGCAAGTGGGTTAAGGCTATTTCCAAACCCAGANCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK067601             [   CTTTCCTCCTCCATTCCAACCTTCCAACCCAACAACCTCAACCCTCCTCCCTCAGTATCCCCCCAAGAACGCGAGGAGCCGAGTCCGTACTAGGCCCAGGTCATCTTTTGTTGTAGAGGCGATGCAGACGGCGGCGGCGGCGGCGGTGGCGTGGGCGCCGAGCCCATCGCCGTCCACCTCCACCTCATCGCCGCCCCCCTTCAAGGTGGGGATCGCGTCGCCGTGTGGGACGGCTGCTCACGCCTCCTCCGCGCCGAGGTTGGTTGCTGCGGCCACTCACCGGGGGCGGCGGCGGCAGCAGCAAGT GGTTAAGGCTATTGCC AACCCAGACCCAGCAGTTGAGCTGCCATTGACAGCTGAAAATGTTGAGATTGTATTGGATGAAGTTCGACCATACCTTATGGCAGACGGAGGAAATGTTGCATTGCATGAAATT GATGGGAATGTGGTGAGGTTGAAGCTGCAAGGAGCATGTG GATCATGCCCAGCTTCAGTAACAACAATGAAGAT GGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGAC TGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACC TATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGCTACAATAA TCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTACAAAAGGT                                                                                               ]
[+] EMBL AK060074             [                        TTCCAACCCAACAACCTCAACCCTCCTCCCTCAGTATCCCCCCAAGAACGCGAGGAGCCGAGTCCGTACTAGGCCCAGGTCATCTTTTGTTGTAGAGGCGATGCAGACGGCGGCGGCGGCGGCGGTGGCGTGGGCGCCGAGCCCATCGCCGTCCACCTCCACCTCATCGCCGCCCCCCTTCAAGGTGGGGATCGCGTCGCCGTGTGGGACGGCTGCTCACGCCTCCTCCGCGCCGAGGTTGGTTGCTGCGGCCACTCACCGGGGGCGGCGGCGGCAGCAGCAAGT GGTTAAGGCTATTGCC AACCCAGACCCAGCAGTTGAGCTGCCATTGACAGCTGAAAATGTTGAGATTGTATTGGATGAAGTTCGACCATACCTTATGGCAGACGGAGGAAATGTTGCATTGCATGAAATT GATGGGAATGTGGTGAGGTTGAAGCTGCAAGGAGCATGTG GATCATGCCCAGCTTCAGTAACAACAATGAAGAT GGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGAC TGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACC TATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGCTACAATAA TCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTACAAAAGGTTTTG                                                                                           ]
[+] EMBL AU162670             [                                                CCTCCCTCAGTATCCCCCCAAGAACGCGAGGAGCCGAGTCCGTACTAGGCCCAGGTCATCTTTTGTTGTAGAGGCGATGCAGACGGCGGCGGCGGCGGCGGTGGCGTGGGCGCCGAGCCCATCGCCGTCCACCTCCACCTCATCGCCGCCCCCCTTCAAGGTGGGGATCGCGTCGCCGTGTGGGACGGCTGCTCACGCCTCCTCCGCGCCGAGGTTGGTTGCTGCGGCCACTCACCGGGGGCGGCGGCGGCAGCAGCAAGT GGTTAAGGCTATTGCC AACCCAGACCCAGCAGTTGAGCTGCCATTGACAGCTGAAAATGTTGAGATTGTATTGGATGAAGTTCGACCATACCTTATGGCAGACGGAGGAAATGTTGCATTGCATGAAATTGGATGGGAATGTGGTGAGGTTGAAGCTGCAAGGAGCATGTG GATCATGCCCAGCTTCAGTAACAACAATGAAGAT GGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGAC TGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGNGGAACC TATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTA                                                                                                                                                                                                                                                                                       ]
[+] EMBL BE229482             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cgagGAGGTTGAAGCTGCAAGGAGCATGTGAGATCATGCCCAGCTTCAGTAACAACAATGAAGATGGGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGACTTGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTCTBGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCYWTTCGTCAAGGTTAGGCTTACGGGCCCAVCTGCT GTGTGATGACAATT                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI805031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGATTA GCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACC TATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAAC ACCCCTGC ATGTAAATGTGCCGCTAC ATAA TCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTAC AAAGGTTTTGGGCTTCTATGATTTTGTCTGTACATTTGTGAATATCACTCTTTTATTTGGAAGTTCGTTGAAATAGAAAAGGGCACTACATTTTAAAAAAA]
[+] EMBL BQ905945             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATGTGCCGCTACAATAATTCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGCTGTTCCTACTGGATTTATTTACAAAAa                                                                                                 ]


>consensus_12405#0 TCCCTTTCCTCCTCCATTCCAACCTTCCAACCCAACAACCTCAACCCTCCTCCCTCAGTA TCCCCCCAAGAACGCGAGGAGCCGAGTCCGTACTAGGCCCAGGTCATCTTTTGTTGTAGA GGCGATGCAGACGGCGGCGGCGGCGGCGGTGGCGTGGGCGCCGAGCCCATCGCCGTCCAC CTCCACCTCATCGCCGCCCCCCTTCAAGGTGGGGATCGCGTCGCCGTGTGGGACGGCTGC TCACGCCTCCTCCGCGCCGAGGTTGGTTGCTGCGGCCACTCACCGGGGGCGGCGGCGGCA GCAGCAAGTGGTTAAGGCTATTGCCAACCCAGACCCAGCAGTTGAGCTGCCATTGACAGC TGAAAATGTTGAGATTGTATTGGATGAAGTTCGACCATACCTTATGGCAGACGGAGGAAA TGTTGCATTGCATGAAATTGATGGGAATGTGGTGAGGTTGAAGCTGCAAGGAGCATGTGG ATCATGCCCAGCTTCAGTAACAACAATGAAGATGGGTATTGAGCGACGCTTGATGGAGAA AATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAA CCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGG TGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACGGGCCC AGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACC TAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAACCCCTG CAATGTAAATGTGCCGCTACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTG TAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTA AGGGTGTTCCTACTGGATTTATTTACAAAAGGTTTTGGGCTTCTATGATTTTGTCTGTAC ATTTGTGAATATCACTCTTTTATTTGGAAGTTCGTTGAAATAGAAAAGGGCACTACATTT TAAAAAAA



consensusID : consensus_12405#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 642
fasta sequence
                              [TGGATGANGTTCGCCCTACCTTATNGCAGACGGAGGAAATGTTGCATTGCCTGAAAATTGATGGGAATGTGGTTGAAGGTTGAAGCTGCAAGGAGCATGTGNATCATGCCCNAGCTTCAGTAACAACAATGAAGATGGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTNTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACNCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGTACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTACAAAAGGTTTTGGGCTTCAAAAAAAAAAAAAAAAA]

[+] EMBL AU056311             [TGGATGANGTTCGCCCTACCTTATNGCAGACGGAGGAAATGTTGCATTGCCTGAAAATTGATGGGAATGTGGTTGAAGGTTGAAGCTGCAAGGAGCATGTGNATCATGCCCNAGCTTCAGTAACAACAATGAAGATGGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTNTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACNCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGTACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTACAAAAGGTTTTGGGCTTCAAAAAAAAAAAAAAAAA]


>consensus_12405#1 TGGATGANGTTCGCCCTACCTTATNGCAGACGGAGGAAATGTTGCATTGCCTGAAAATTG ATGGGAATGTGGTTGAAGGTTGAAGCTGCAAGGAGCATGTGNATCATGCCCNAGCTTCAG TAACAACAATGAAGATGGGTATTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTG CTNTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATATTGAAA AGGTACNCGATGAGATTAGGCCATACCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCG TTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGA CAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCC AGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGT ACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTC TACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGAT TTATTTACAAAAGGTTTTGGGCTTCAAAAAAAAAAAAAAAAA



consensusID : consensus_12405#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 511
fasta sequence
                              [CGAGCTCGTGCCGAATTCGGCACGACTGCAAGGAGCATGTGGATCNTGCCCAGCTTCNGTAACAACAATGAAGATGGGTNTTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATNTTGAAAAGGTNCTCGATGAGATTAGGCCATNCCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGANGAACCTATCGTCNAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTNACTCNGAAGCTCNGAGAAAAGATNCCTNANATCGCNGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTNNAAAACAACCCCNGCNATGTTANTGTGCCGCTACNATAATCNCCANGAAAGATTGTTTTGGGCNTAAAGCTTTGTTACCTGTTACTCTATTCTACTTGAACTACNAATAGTGATCATCCATAT]

[+] EMBL BE228357             [CGAGCTCGTGCCGAATTCGGCACGACTGCAAGGAGCATGTGGATCNTGCCCAGCTTCNGTAACAACAATGAAGATGGGTNTTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATNTTGAAAAGGTNCTCGATGAGATTAGGCCATNCCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGANGAACCTATCGTCNAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTNACTCNGAAGCTCNGAGAAAAGATNCCTNANATCGCNGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTNNAAAACAACCCCNGCNATGTTANTGTGCCGCTACNATAATCNCCANGAAAGATTGTTTTGGGCNTAAAGCTTTGTTACCTGTTACTCTATTCTACTTGAACTACNAATAGTGATCATCCATAT]


>consensus_12405#2 CGAGCTCGTGCCGAATTCGGCACGACTGCAAGGAGCATGTGGATCNTGCCCAGCTTCNGT AACAACAATGAAGATGGGTNTTGAGCGACGCTTGATGGAGAAAATTCCTGAAATTGTTGC TGTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATNTTGAAAA GGTNCTCGATGAGATTAGGCCATNCCTTTCTGGCACAGGAGGTGGTGAGCTTGAATTCGT TGCGATCGANGAACCTATCGTCNAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGAC AGTTCGCGTTGCCCTNACTCNGAAGCTCNGAGAAAAGATNCCTNANATCGCNGCTGTCCA GCTATTGTCGTAAGCCTGAAAACATTTNNAAAACAACCCCNGCNATGTTANTGTGCCGCT ACNATAATCNCCANGAAAGATTGTTTTGGGCNTAAAGCTTTGTTACCTGTTACTCTATTC TACTTGAACTACNAATAGTGATCATCCATAT



consensusID : consensus_12405#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence
                              [AGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTNTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTNGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGCTACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTNTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTAAAAAAAAAAAAAAAA]

[+] EMBL AU181705             [AGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTNTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTATTGTNGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGCTACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTNTACTTGAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATTTAAAAAAAAAAAAAAAA]


>consensus_12405#3 AGCCCATTGCTGATGAGGAGACTGGCCTTGAGTTGAACCAGGAGAATATTGAAAAGGTAC TCGATGAGATTAGGCCATACCTTTNTGGCACAGGAGGTGGTGAGCTTGAATTCGTTGCGA TCGAGGAACCTATCGTCAAGGTTAGGCTTACGGGCCCAGCTGCTGGTGTGATGACAGTTC GCGTTGCCCTAACTCAGAAGCTCAGAGAAAAGATACCTAAAATCGCAGCTGTCCAGCTAT TGTNGTAAGCCTGAAAACATTTAGAAAACAACCCCTGCAATGTAAATGTGCCGCTACAAT AATCGCCAGGAAAGATTGTAATGGGCTTAAAGCTTTGTAACCTGTTACTCTATTNTACTT GAACTACGAATAGTGATCATCAATATGAAATGTTGTAAGGGTGTTCCTACTGGATTTATT TAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12405#1      ------------------------------------------------------------
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      TCCCTTTCCTCCTCCATTCCAACCTTCCAACCCAACAACCTCAACCCTCCTCCCTCAGTA 60
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      ------------------------------------------------------------
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      TCCCCCCAAGAACGCGAGGAGCCGAGTCCGTACTAGGCCCAGGTCATCTTTTGTTGTAGA 120
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      ------------------------------------------------------------
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      GGCGATGCAGACGGCGGCGGCGGCGGCGGTGGCGTGGGCGCCGAGCCCATCGCCGTCCAC 180
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      ------------------------------------------------------------
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      CTCCACCTCATCGCCGCCCCCCTTCAAGGTGGGGATCGCGTCGCCGTGTGGGACGGCTGC 240
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      ------------------------------------------------------------
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      TCACGCCTCCTCCGCGCCGAGGTTGGTTGCTGCGGCCACTCACCGGGGGCGGCGGCGGCA 300
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      ------------------------------------------------------------
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      GCAGCAAGTGGTTAAGGCTATTGCCAACCCAGACCCAGCAGTTGAGCTGCCATTGACAGC 360
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      --------------------TGGATGANGTTCGCCC-TACCTTATNGCAGACGGAGGAAA 39
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      TGAAAATGTTGAGATTGTATTGGATGAAGTTCGACCATACCTTATGGCAGACGGAGGAAA 420
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      TGTTGCATTGCCTGAAAATTGATGGGAATGTGGTTGAAG-GTTGAAGCTGCAAGGAGCAT 98
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      TGTTGCATTGCATGAAA-TTGATGGGAATGTGGT--GAG-GTTGAAGCTGCAAGGAGCAT 476
consensus_12405#2      ----------------------CGAGCTCGTGCCGAATTCGGCACGACTGCAAGGAGCAT 38
                                                                                   

consensus_12405#1      GTGNATCATGCCCNAGCTTCAGTAACAACAATGAAGATGGGTATTGAGCGACGCTTGATG 158
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      GTGGATCATGCCCA-GCTTCAGTAACAACAATGAAGATGGGTATTGAGCGACGCTTGATG 535
consensus_12405#2      GTGGATCNTGCCCA-GCTTCNGTAACAACAATGAAGATGGGTNTTGAGCGACGCTTGATG 97
                                                                                   

consensus_12405#1      GAGAAAATTCCTGAAATTGTTGCTNTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAG 218
consensus_12405#3      ----------------------------AGCCCATTGCTGATGAGGAGACTGGCCTTGAG 32
consensus_12405#0      GAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAG 595
consensus_12405#2      GAGAAAATTCCTGAAATTGTTGCTGTCGAGCCCATTGCTGATGAGGAGACTGGCCTTGAG 157
                                                   ********************************

consensus_12405#1      TTGAACCAGGAGAATATTGAAAAGGTACNCGATGAGATTAGGCCATACCTTTCTGGCACA 278
consensus_12405#3      TTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTNTGGCACA 92
consensus_12405#0      TTGAACCAGGAGAATATTGAAAAGGTACTCGATGAGATTAGGCCATACCTTTCTGGCACA 655
consensus_12405#2      TTGAACCAGGAGAATNTTGAAAAGGTNCTCGATGAGATTAGGCCATNCCTTTCTGGCACA 217
                       *************** ********** * ***************** ***** *******

consensus_12405#1      GGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACG 338
consensus_12405#3      GGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACG 152
consensus_12405#0      GGAGGTGGTGAGCTTGAATTCGTTGCGATCGAGGAACCTATCGTCAAGGTTAGGCTTACG 715
consensus_12405#2      GGAGGTGGTGAGCTTGAATTCGTTGCGATCGANGAACCTATCGTCNAGGTTAGGCTTACG 277
                       ******************************** ************ **************

consensus_12405#1      GGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAG 398
consensus_12405#3      GGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAG 212
consensus_12405#0      GGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTAACTCAGAAGCTCAGAGAAAAG 775
consensus_12405#2      GGCCCAGCTGCTGGTGTGATGACAGTTCGCGTTGCCCTNACTCNGAAGCTCNGAGAAAAG 337
                       ************************************** **** ******* ********

consensus_12405#1      ATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAAC 458
consensus_12405#3      ATACCTAAAATCGCAGCTGTCCAGCTATTGTNGTAAGCCTGAAAACATTTAGAAAACAAC 272
consensus_12405#0      ATACCTAAAATCGCAGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTAGAAAACAAC 835
consensus_12405#2      ATNCCTNANATCGCNGCTGTCCAGCTATTGTCGTAAGCCTGAAAACATTTNNAAAACAAC 397
                       ** *** * ***** **************** ******************  ********

consensus_12405#1      CCCTGCAATGTAAATGTGCCG-TACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAG 517
consensus_12405#3      CCCTGCAATGTAAATGTGCCGCTACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAG 332
consensus_12405#0      CCCTGCAATGTAAATGTGCCGCTACAATAATCGCCAGGAAAGATTGTAATGGGCTTAAAG 895
consensus_12405#2      CCCNGCNATGTTANTGTGCCGCTACNATAATCNCCANGAAAGATTGTTTTGGGCNTAAAG 457
                       *** ** **** * ******* *** ****** *** **********  ***** *****

consensus_12405#1      CTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATG 577
consensus_12405#3      CTTTGTAACCTGTTACTCTATTNTACTTGAACTACGAATAGTGATCATCAATATGAAATG 392
consensus_12405#0      CTTTGTAACCTGTTACTCTATTCTACTTGAACTACGAATAGTGATCATCAATATGAAATG 955
consensus_12405#2      CTTTGTTACCTGTTACTCTATTCTACTTGAACTACNAATAGTGATCATCCATAT------ 511
                       ****** *************** ************ ************* ****      

consensus_12405#1      TTGTAAGGGTGTTCCTACTGGATTTATTTACAAAAGGTTTTGGGCTTCAAAAAAAAAAAA 637
consensus_12405#3      TTGTAAGGGTGTTCCTACTGGATTTATTTAAAAAA-------------AAAAAAAAAA-- 437
consensus_12405#0      TTGTAAGGGTGTTCCTACTGGATTTATTTACAAAAGGTTTTGGGCTTCTATGATTTTGTC 1015
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      AAAAA------------------------------------------------------- 642
consensus_12405#3      ------------------------------------------------------------
consensus_12405#0      TGTACATTTGTGAATATCACTCTTTTATTTGGAAGTTCGTTGAAATAGAAAAGGGCACTA 1075
consensus_12405#2      ------------------------------------------------------------
                                                                                   

consensus_12405#1      -------------
consensus_12405#3      -------------
consensus_12405#0      CATTTTAAAAAAA 1088
consensus_12405#2      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)