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Oryza sativa
cluster # 12424 cluster # 12424       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12424#0 length = 1238 sequences # 8  
consensus_12424#1 length = 545 sequences # 2  

consensusID : consensus_12424#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1238
fasta sequence
                              [CGCGTCCGGTTTCTCCCTGTCCACTTCTGTCCGATTCCTCCTCACCTCTTATCGATTGGACGACCATGGCGGCGCCGCGCGAGCCGGAGGTGATCCGCGACAAGGCGGCGATGCGCGCATGGTCGCGCCGCCGCCGCGCCGAGGGCAAGACCGTCGCGGTCGTACCCACCATGGGCTACCTCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGCCTCCGCTGATCCCGTCGCCATCGTCGTCACCATCTACGTCAACCCCAGCCAGTTCGCGCCCTCAGAGGACCTCGCCACCTACCCTTCCGACTTCGCCGGTGACCTCCGCAAGCTCGCCTCCACCGGCGTCGTGGATGCCGTCTTCAACCCCCCTGACCTCTACGTCCGTGGCGCCGGTCGCCGCGGCGCCGCCTCCGGAGGCGCGATCTCCTGCCTGGAGGAGGCGGCCGGGGATGGGCACGAGACGTGGGTTCGGGTGGAGCGATTGGAGAAGGGGATGTGCGGGGCCAGCCGTCCCGTGTTCTTCCGAGGCGTGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTGCTGTGTTCGGGAAGAAGGATTATCAGCAGTGGCGCGTCATC-TGCCGTATGGTTCGTGATCTTGATTTTGCCATAGAGATAATAGGATC-AGAAATTGTGCGAGAAGCTGATGGTCTTGCCATGAGCTCCCGGAATGTGCACCTATCACGCGAGGAGAGGG-AAAAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGA-AGGGAAACACTGATTGCAAACAAATCAAAA-ACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGA-TACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAGATTCCGCTGAAGTATTGCTCT]

[+] EMBL OSPANC               [CGCGTCCGGTTTCTCCCTGTCCACTTCTGTCCGATTCCTCCTCACCTCTTATCGATTGGACGACCATGGCGGCGCCGCGCGAGCCGGAGGTGATCCGCGACAAGGCGGCGATGCGCGCATGGTCGCGCCGCCGTCGCGCCGAGGGCAAGACCGTCGCGGTCGTACCCACCATGGGCTACCTCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGCCTCCGCTGATCCCGTCGCCATCGTCGTCACCATCTACGTCAACCCCAGCCAGTTCGCGCCCTCAGAGGACCTCGCCACCTACCCTTCCGACTTCGCCGGTGACCTCCGCAAGCTCGCCTCCACCGGCGTCGTGGATGCCGTCTTCAACCCCCCTGACCTCTACGTCCGTGGCGCCGGTCGCCGCGGGGCCGGCTCCGGAGGCGCGATCTCCTGCCTGGAGGAGGCGGCCGGGGATGGGCACGAGACGTGGGTTCGGGTGGAGCGATTGGAGAAGGGATTGTGCGGGGCCAGCCGTCCCGTGTTCTTCCGAGGCGTGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTCCTGTGTTCGGGAAGAAGGATTATCAGCAGTGGCGCGTCATCTTGCCGTATTGGTCGGGA CTTGATTTTGGCATAGAGATAATGGGATCAAGAAATTGTGCGAGAA CTGATGGTCTTGCCATGAACTCCCGGAATGTGCACCTATCACGCGAGGA AGGGAAAAAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGA AGGGAAACACTGATTCCAAACAAATCAAAA ACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGA TACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAGATTC                 ]
[+] EMBL AK066656             [               CCTGTCCACTTCTGTCCGATTCCTCCTCACCTCTTATCGATTGGACGACCATGGCGGCGCCGCGCGAGCCGGAGGTGATCCGCGACAAGGCGGCGATGCGCGCATGGTCGCGCCGCCGCCGCGCCGAGGGCAAGACCGTCGCGGTCGTACCCACCATGGGCTACCTCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGCCTCCGCTGATCCCGTCGCCATCGTCGTCACCATCTACGTCAACCCCAGCCAGTTCGCGCCCTCAGAGGACCTCGCCACCTACCCTTCCGACTTCGCCGGTGACCTCCGCAAGCTCGCCTCCACCGGCGTCGTGGATGCCGTCTTCAACCCCCCTGACCTCTACGTCCGTGGCGCCGGTCGCCGCGGCGCCGCCTCCGGAGGCGCGATCTCCTGCCTGGAGGAGGCGGCCGGGGATGGGCACGAGACGTGGGTTCGGGTGGAGCGATTGGAGAAGGGGATGTGCGGGGCCAGCCGTCCCGTGTTCTTCCGAGGCGTGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTGCTGTGTTCGGGAAGAAGGATTATCAGCAGTGGCGCGTCATC TGCCGTATGGTTCGTGATCTTGATTTTGCCATAGAGATAATAGGATC AGAAATTGTGCGAGAAGCTGATGGTCTTGCCATGAGCTCCCGGAATGTGCACCTATCACGCGAGGAGAGGG AAAAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGA AGGGAAACACTGATTGCAAACAAATCAAAA ACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGA TACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACA                      ]
[+] EMBL OSR29421A            [                 TGTCCACTTCTGTCCGATTCCTCCTCACCTCTTATCGATTGGACGACCATGGCGGCGCCGCGCGAGCCGGAGGTGATCCGCGACAAGGCGGCGATGCGCGCATGGTCGCGCCGCCGCCGCGCCGAGGGCAAGACCGTCGCGGTCGTACCCACCATGGGCTACCTCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGNCTCCGCTGATCCCGTCGCCATCGTCGTCACCATCTACGTCAACCCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK104812             [                                                                                       AGGTGATCCGCGACAAGGCGGCGATGCGCGCATGGTCGCGCCGCCGCCGCGCCGAGGGCAAGACCGTCGCGGTCGTACCCACCATGGGCTACCTCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGCCTCCGCTGATCCCGTCGCCATCGTCGTCACCATCTACGTCAACCCCAGCCAGTTCGCGCCCTCAGAGGACCTCGCCACCTACCCTTCCGACTTCGCCGGTGACCTCCGCAAGCTCGCCTCCACCGGCGTCGTGGATGCCGTCTTCAACCCCCCTGACCTCTACGTCCGTGGCGCCGGTCGCCGCGGCGCCGCCTCCGGAGGCGCGATCTCCTGCCTGGAGGAGGCGGCCGGGGATGGGCACGAGACGTGGGTTCGGGTGGAGCGATTGGAGAAGGGGATGTGCGGGGCCAGCCGTCCCGTGTTCTTCCGAGGCGTGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTGCTGTGTTCGGGAAGAAGGATTATCAGCAGTGGCGCGTCATC TGCCGTATGGTTCGTGATCTTGATTTTGCCATAGAGATAATAGGATC AGAAATTGTGCGAGAAGCTGATGGTCTTGCCATGAGCTCCCGGAATGTGCACCTATCACGCGAGGAGAGGG AAAAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGA AGGGAAACACTGATTGCAAACAAATCAAAA ACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGA TACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAGATTCCGCTGAA          ]
[+] EMBL CB629807             [                                                                                                                                                                           TGGGGTANCTCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGCCTCCGCTGATCCCGTCGCCATCGTCGTCACCATCTACGTCAACCCCAGCCAGTTCGCGCCCTCAGAGGACCTCGCCACCTACCCTTCCGACTTTGCCGGTGACCTCCGCAAGCTCGCCTCCACCGGCGTCGTGGATGCCGTCTTCAACCCCCCTGACCTCTACGTTCGTGGAGCCGGTCGTCGCGGCGCCGCCTCCGGAGGCGCGATCTCCTGCCTGGAGGAGGCGGTCGGGGATGGGCACGAGACGTGGGTTCGGGTGGAGCGATTGGAGAAGGGGATGTGCGGGGCCAGCCGTCCCGTGTTCTTCCGAGGCGTGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTGCTGTGTTCGGGAAGAAGGATTATCAGTAGTGGCGCGTCATC TGCCGTATGGTTCGTGATCTTGATTTTGCCATAGAGATAATAGGATC AGAAATTGTGCGAGAAGCTGATGGTCTTGCCATGAGCTGTCGGAATGTGCACATATCATGCGAGGAGAGGG AAAAGGCATTATTCATCAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB629808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCCAGCCGTCCCGTGTTCTTCCGAGGCGTGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTGCTGTGTTCGGGAAGAAGGATTATCAGCAGTGGCGCGTCATC TGCCGTATGGTTCGTGATCTTGATTTTGCCATAGAGATAATAGGATC AGAAATTGTGCGAGAAGCTGATGGTCTTGCCATGAGCTCTCGGAATGTGCACCTATCACGCGAGGAGAGGG AAAAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGA AGGGAAACACTGATTGCAAACAAATCAAAA ACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGA TACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGATGGTTGATTACAGATTCCGCTGAAGTATTGCTCT]
[+] EMBL BM419808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATCACGCGAGGAGAGGG AAAAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGANAGGGAAACACTGATTGCAAACNAATCAAAANACNAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGAGTACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTAaaaaaaaaa               ]
[+] EMBL AU173408             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAACCCCTGATTGCAANCAAATCAAAA NCAAAATAGTCCAGCCCCTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGA TACNCGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTTGTACGCTGTAACAATCNCAGAGAGAAAATATGCAGGAGTACNCTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAGATTCCGCTGAAaaaaaaa   ]


>consensus_12424#0 CGCGTCCGGTTTCTCCCTGTCCACTTCTGTCCGATTCCTCCTCACCTCTTATCGATTGGA CGACCATGGCGGCGCCGCGCGAGCCGGAGGTGATCCGCGACAAGGCGGCGATGCGCGCAT GGTCGCGCCGCCGCCGCGCCGAGGGCAAGACCGTCGCGGTCGTACCCACCATGGGCTACC TCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGCCTCCGCTGATCCCG TCGCCATCGTCGTCACCATCTACGTCAACCCCAGCCAGTTCGCGCCCTCAGAGGACCTCG CCACCTACCCTTCCGACTTCGCCGGTGACCTCCGCAAGCTCGCCTCCACCGGCGTCGTGG ATGCCGTCTTCAACCCCCCTGACCTCTACGTCCGTGGCGCCGGTCGCCGCGGCGCCGCCT CCGGAGGCGCGATCTCCTGCCTGGAGGAGGCGGCCGGGGATGGGCACGAGACGTGGGTTC GGGTGGAGCGATTGGAGAAGGGGATGTGCGGGGCCAGCCGTCCCGTGTTCTTCCGAGGCG TGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTGCTGTGTTCGGGA AGAAGGATTATCAGCAGTGGCGCGTCATCTGCCGTATGGTTCGTGATCTTGATTTTGCCA TAGAGATAATAGGATCAGAAATTGTGCGAGAAGCTGATGGTCTTGCCATGAGCTCCCGGA ATGTGCACCTATCACGCGAGGAGAGGGAAAAGGCATTATCCATCAGTAGATCACTGGTTG ATGCTAGAACTGGCGCCTTGAAGGGAAACACTGATTGCAAACAAATCAAAAACAAAATAG TACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAA GTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTG GAAAGGTCAGGCTGATCGATAATATCGAAATCGATACACGATCCTGAGGTTTTGGGGGGA TTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGA TGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACT GACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATC ATGCTTGTTGATTACAGATTCCGCTGAAGTATTGCTCT



consensusID : consensus_12424#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 545
fasta sequence
                              [TTTTTTTTTCGCTAGCTCACCATGACTTTTGCCAATGGTTGTATTATTTCTTTTGTAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGAAGGGAAACACTGATTGCAAACAAATCAAAAACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGATACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTCGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAAAAAAAAAAAAAAAAAACTCGAG]

[-] EMBL BE040497             [TTTTTTTTTCGCTAGCTCACCATGACTTTTGCCAATGGTTGTATTATTTCTTTTGTAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGAAGGGAAACACTGATTGCAAACAAATCAAAAACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGATACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTCGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAAAAAAAAAAAAAAAAAACTCGAG]
[-] EMBL CA758922             [ TTTTTTTTCGCTAGCTCACCATGAACTTTGCCAATGGTTGTATTATTTCTTTTGTAGGCATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGAAGGGAAACACTGATTGCAAGCAAATCAAAAACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGATACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTCGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAAAAAAAAAAAAAAAAAACTCGAG]


>consensus_12424#1 TTTTTTTTTCGCTAGCTCACCATGACTTTTGCCAATGGTTGTATTATTTCTTTTGTAGGC ATTATCCATCAGTAGATCACTGGTTGATGCTAGAACTGGCGCCTTGAAGGGAAACACTGA TTGCAAACAAATCAAAAACAAAATAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGA CTATGTTGAGATCGTGGAGCAAGAAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGT GGTCATTTGCGTTGCGGCGTGGTTTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGA TACACGATCCTGAGGTTTTGGGGGGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCG TTTGAAATACCTTTTGTTTCGCGTGATGATTCGCGTCATGTCGTACGCTGTAACAATCAC AGAGAGAAAATATGCAGGAGTACACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGA GGCCTGATGCTGTAACAGGGGAAATCATGCTTGTTGATTACAAAAAAAAAAAAAAAAAAC TCGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12424#0      CGCGTCCGGTTTCTCCCTGTCCACTTCTGTCCGATTCCTCCTCACCTCTTATCGATTGGA 60
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      CGACCATGGCGGCGCCGCGCGAGCCGGAGGTGATCCGCGACAAGGCGGCGATGCGCGCAT 120
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      GGTCGCGCCGCCGCCGCGCCGAGGGCAAGACCGTCGCGGTCGTACCCACCATGGGCTACC 180
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      TCCACCAAGGCCACCTCTCCCTCATCTCCGCCGCCGCCGCCGCCGCCTCCGCTGATCCCG 240
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      TCGCCATCGTCGTCACCATCTACGTCAACCCCAGCCAGTTCGCGCCCTCAGAGGACCTCG 300
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      CCACCTACCCTTCCGACTTCGCCGGTGACCTCCGCAAGCTCGCCTCCACCGGCGTCGTGG 360
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      ATGCCGTCTTCAACCCCCCTGACCTCTACGTCCGTGGCGCCGGTCGCCGCGGCGCCGCCT 420
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      CCGGAGGCGCGATCTCCTGCCTGGAGGAGGCGGCCGGGGATGGGCACGAGACGTGGGTTC 480
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      GGGTGGAGCGATTGGAGAAGGGGATGTGCGGGGCCAGCCGTCCCGTGTTCTTCCGAGGCG 540
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      TGGCCACCATAGTCTCCAAGCTGTTTAACATCATCGAGCCGGATGTTGCTGTGTTCGGGA 600
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      AGAAGGATTATCAGCAGTGGCGCGTCATCTGCCGTATGGTTCGTGATCTTGATTTTGCCA 660
consensus_12424#1      ------------------------------------------------------------
                                                                                   

consensus_12424#0      TAGAGATAATAGGATCAGAAATTGTGCGAGAAGCTGATGGTCTTGCCATGAGCTC-CCGG 719
consensus_12424#1      -------------------------------------TTTTTTTTTCGCTAGCTCACCAT 23
                                                            *  * **  *   ***** **  

consensus_12424#0      AATGTGCACCTATCACGCGAGGAGAGGGA--AAAGGCATTATCCATCAGTAGATCACTGG 777
consensus_12424#1      GACTTTTGCCAATGGTTGTATTATTTCTTTTGTAGGCATTATCCATCAGTAGATCACTGG 83
                        *  *   ** **      *  *          ***************************

consensus_12424#0      TTGATGCTAGAACTGGCGCCTTGAAGGGAAACACTGATTGCAAACAAATCAAAAACAAAA 837
consensus_12424#1      TTGATGCTAGAACTGGCGCCTTGAAGGGAAACACTGATTGCAAACAAATCAAAAACAAAA 143
                       ************************************************************

consensus_12424#0      TAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAG 897
consensus_12424#1      TAGTACAGACACTAACTGAAACTGGCGGTCAGGTTGACTATGTTGAGATCGTGGAGCAAG 203
                       ************************************************************

consensus_12424#0      AAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGT 957
consensus_12424#1      AAAGTTTGGTCCCTGTAGAACAGATCGACGGCCCTGTGGTCATTTGCGTTGCGGCGTGGT 263
                       ************************************************************

consensus_12424#0      TTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGATACACGATCCTGAGGTTTTGGGG 1017
consensus_12424#1      TTGGAAAGGTCAGGCTGATCGATAATATCGAAATCGATACACGATCCTGAGGTTTTGGGG 323
                       ************************************************************

consensus_12424#0      GGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCG 1077
consensus_12424#1      GGATTCACTTGCTGTCTGCTGTGACCTTGGCATTGCGTTTGAAATACCTTTTGTTTCGCG 383
                       ************************************************************

consensus_12424#0      TGATGATTCGCGTCATGTTGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTAC 1137
consensus_12424#1      TGATGATTCGCGTCATGTCGTACGCTGTAACAATCACAGAGAGAAAATATGCAGGAGTAC 443
                       ****************** *****************************************

consensus_12424#0      ACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAA 1197
consensus_12424#1      ACTGACTGAAGGCAAATTTATAAGTACAAACTGTAGAGGCCTGATGCTGTAACAGGGGAA 503
                       ************************************************************

consensus_12424#0      ATCATGCTTGTTGATTACAGATTCCGCTGAAGTATTGCTCT-- 1238
consensus_12424#1      ATCATGCTTGTTGATTACAAAAAAAAA-AAAAAAAAACTCGAG 545
                       ******************* *        **  *   ***   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)