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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12460#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1859 fasta sequence
[GGTTCCCACTATATGGGTTTGTATAACTATATAAAAGATATACATAGCGCTGAGCTCTAGCTGCCGAAACTAGAGGACACCGAGTTCTACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTCTAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATCCACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTACACTTACACTTGCAATTGACGAAAGCAATGGTTCAGAAGAAAAACCATTTTTTAATCTCAAGGGATACATTGCTGGAAATCCAGTGACAGATTACAAGATTGATGAAGATGGTAGAATTCCATTTCTGCATGGCATGGGACTTATATCTGATGAACTTTACGAACATGCAAAGGAGACCTGCGGAGAAAAATACAGTGCTCCGAGCAATGCTCAATGTGCGCATTCCGTCCAAGCAATAAACGATGACATCAACAGGGGACACATTCTTGAGCCATTATGTGAAGAACTCCAGAGCCCCATCCATAACACTGCAGCGAGAGATGTAATGAGTAGGCTCATGCTGGAGTCTCGTCCTGCTGCTGCCGATGATGACATTATTATATTTGAGTGTAGAAAAGCTTCCCACGTGTTATTAAAAATATGGGCAAATGATGAAACAGTAAGGGAGAGTCTTGGTGTGCAAAAGGGAACAGTTGGAGAGTGGAAACGATGCAATCGCGATATAGATTACAATAGCGATGTCCGTAGTACAGTGGAATATCATTTGACGCTAATGAGAAAGGGATACCGAGCAATCATATACAGCGGTGATCATGATTCTAGAGTTCCCTCCATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCTATTGCTGATGATTGGCGACCGTGGTACGTTGATGGACAAGTTGCCGGATTCACACGAAGCTTTGCGAGTAATAACCTGACATACGCAACTGTGAAGGGCGCTGGGCATACTGCTGCAGAGTATAAACCCAAGGAGTGTCAAGAGATGTTTGCAAGATGGATTTCAGGCACTCCTCTCTGACGTATATTGTTCAAGTCACCTGTAAAAACATAATCAAACGATCATATGAGAGGTAAAATAAAGATTTGCTGCTTGTAATAATTACTCCGTTCGGGCTGATAATACTTGTCGTTTTGGACAAGAGTGAAGTTAAACTCTAGAATCTTTGATTATGAATCATTTTAAAAAAAAAAAAAAAAAACTC]
[+] EMBL AK066902 [GGTTCCCACTATATGGGTTTGTATAACTATATAAAAGATATACATAGCGCTGAGCTCTAGCTGCCGAAACTAGAGGACACCGAGTTCTACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTCTAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATCCACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTACACTTACACTTGCAATTGACGAAAGCAATGGTTCAGAAGAAAAACCATTTTTTAATCTCAAGGGATACATTGCTGGAAATCCAGTGACAGATTACAAGATTGATGAAGATGGTAGAATTCCATTTCTGCATGGCATGGGACTTATATCTGATGAACTTTACGAACATGCAAAGGAGACCTGCGGAGAAAAATACAGTGCTCCGAGCAATGCTCAATGTGCGCATTCCGTCCAAGCAATAAACGATGACATCAACAGGGGACACATTCTTGAGCCATTATGTGAAGAACTCCAGAGCCCCATCCATAACACTGCAGCGAGAGATGTAATGAGTAGGCTCATGCTGGAGTCTCGTCCTGCTGCTGCCGATGATGACATTATTATATTTGAGTGTAGAAAAGCTTCCCACGTGTTATTAAAAATATGGGCAAATGATGAAACAGTAAGGGAGAGTCTTGGTGTGCAAAAGGGAACAGTTGGAGAGTGGAAACGATGCAATCGCGATATAGATTACAATAGCGATGTCCGTAGTACAGTGGAATATCATTTGACGCTAATGAGAAAGGGATACCGAGCAATCATATACAGCGGTGATCATGATTCTAGAGTTCCCTCCATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCTATTGCTGATGATTGGCGACCGTGGTACGTTGATGGACAAGTTGCCGGATTCACACGAAGCTTTGCGAGTAATAACCTGACATACGCAACTGTGAAGGGCGCTGGGCATACTGCTGCAGAGTATAAACCCAAGGAGTGTCAAGAGATGTTTGCAAGATGGATTTCAGGCACTCCTCTCTGACGTATATTGTTCAAGTCACCTGTAAAAACATAATCAAACGATCATATGAGAGGTAAAATAAAGATTTGCTGCTTGTAATAATTACTCCGTTCGGGCTGATAATACTTGTCGTTTTGGACAAGAGTGAAGTTAAACTCTAGA ]
[-] EMBL CF324650 [ TATACAGCGGTGATCATGATTCTAGAGTTCCCTCCATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCTATTGCTGATGATTGGCGACCGTGGTACGTTGATGGACAAGTTGCCGGATTCACACGAAGCTTTGCGAGTAATAACCTGACATACGCAACTGTGAAGGGCGCTGGGCATACTGCTGCAGAGTATAAACCCAAGGAGTGTCAAGAGATGTTTGCAAGATGGATTTCAGGCACTCCTCTCTGACGTATATTGTTCAAGTCACCTGTAAAAACATAATCAAACGATCATATGAGAGGTAAAATAAAGATTTGCTGCTTGTAATAATTACTCCGTTCGGGCTGATAATACTTGTCGTTTTGGACAAGAGTGAAGTTAAACTCTAGAATCTTTGATTATGAATCATTTTAAAAAAAAAAAAAAAAAACTC]
consensusID : consensus_12460#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 853 fasta sequence
[CGATTGCACAAAGGACATCTCCAGGGGACACATTCTTGAGCCATTATGTGAAGAACTCCAGAGCCCCATCCATAACAATGCAGCGAGAGATGTAATGAGTAGGCTCATGCTGGAGTCTCGTCCTGCTGCTGCCGATGATGACATTATTATATTTGAGTGTAGAAAAGCTTCCCACGTGTTATTATAAATATGGGCAAATGATGAAACAGTAAGGGAGAGTCTTGGTGTGCAAAAGGGAACAGTTGGAGAGTGGAAATGATGCATTCGCGATATAGATTCCAATAGCGATGTCCGTAGTACAGTGGAATTATCATTTGACGTTAATGAGAAAGGGATACCGAGCAATCATATACAGCGGTGATCATGATTGTAGAGTTCCCTCCATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCTATTGATGATGATTGGCGGCCGTGGTACGTTGATGGACAAGTTGCCGGATTCACGGGAAGCTTTGTGAGTAATACCATGACATACGCATCTTTGAAGGGCGTTGGGCATACTGTTGCAGAGTATAATCCCAAGGAGTGTCATGAGATGTTCGCAAGATGGATTTCAGGCACTCCTCTTTGACGTATATTGTTCAAGTCACCGGTAAAAACATAATCAAACGATCATATGAGAGGTAAAATAAAGATTTGCTGCTTGTAATAATTACTCCGTTCGGGCTGATAATACTTGTCGTTTTGGACAAGAGTGAAGTTAAACTCTAGAATCTTTGATTATGAATCATTTTAAAAATATTTGTCTTCCAAATATGATGACTACATGTATAGATTAGTCTTAAAAAATACTTTAATAAGATCATATATTTGCTAAAAAAA]
[-] EMBL CB679385 [CGATTGCACAAAGGACATCTCCAGGGGACACATTCTTGAGCCATTATGTGAAGAACTCCAGAGCCCCATCCATAACAATGCAGCGAGAGATGTAATGAGTAGGCTCATGCTGGAGTCTCGTCCTGCTGCTGCCGATGATGACATTATTATATTTGAGTGTAGAAAAGCTTCCCACGTGTTATTATAAATATGGGCAAATGATGAAACAGTAAGGGAGAGTCTTGGTGTGCAAAAGGGAACAGTTGGAGAGTGGAAATGATGCATTCGCGATATAGATTCCAATAGCGATGTCCGTAGTACAGTGGAATTATCATTTGACGTTAATGAGAAAGGGATACCGAGCAATCATATACAGCGGTGATCATGATTGTAGAGTTCCCTCCATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCTATTGATGATGATTGGCGGCCGTGGTACGTTGATGGACAAGTTGCCGGATTCACGGGAAGCTTTGTGAGTAATACCATGACATACGCATCTTTGAAGGGCGTTGGGCATACTGTTGCAGAGTATAATCCCAAGGAGTGTCATGAGATGTTCGCAAGATGGATTTCAGGCACTCCTCTTTGACGTATATTGTTCAAGTCACCGGTAAA ]
[+] EMBL AU078165 [ CCCACGTGTTATTAAAAATATGGGCAAATGATGAAACAGTAAGGGAGAGTCTTGGTGTGCAAAAGGGAACAGTTGGAGAGTGGAAACGATGCAATCGCGATATAGATTACAATAGCGATGTCCGTAGTACAGTGGAA TATCATTTGACGCTAATGAGAAAGGGATACCGAGCAATCATATACAGCGGTGATCATGATTCTAGAGTTCCCTCCATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCTATTGCTGATGATTGGCGACCGTGGTACGTTGATGGACAAGTTGCCGGATTCACACGAAGCTTTGCGAGTAATAACCTGACATACGCAACTGTGAAGGGCGCTGGGCATACTGCTGCAGAGTATAANCCCAAGGAGTGTCAAGAGATGTTTGCAAGATGGATTTCAGGCACTCCTNTCTGACGTATATTGTTCAAGTCACCTGTAAAAACATAATCAAACGATCATATGAGAGGTAAAATAAAGATTTGCTGCTTGTAATAATTACTCCGTTCGGGCTGATAATACTTGTCGTTTTGGACAAGAGTGAAGTTAAACTCTAGAATCTTTGATTATGAATCATTTTAAAAATATTTGTCTTCCAAATATGATGACTACATGTATAGATTAGTCTTAAAAAATACTTTAATAAGATCATATATTTGCTAAAAAAA]
consensusID : consensus_12460#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 794 fasta sequence
[ACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGC-AGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTCTAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGATATTCCGTGGATGCGTGCTAAAAGTGTTGCTTTATACAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATCCACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTA]
[+] EMBL CB679384 [ACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGC AGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTCTAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGATATTCCGTGGATGCGTGCTAAAAGTGTTGCTTTATACAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATCCACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTA]
[+] EMBL CB636233 [ACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGC AGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAA ]
[+] EMBL OSS5044A [ACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTNTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTTGGTAACAGGTGGGCCTGG TTCTTTAGna ]
consensusID : consensus_12460#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 789 fasta sequence
[ACTCTTGCCTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGGTATGTCAATAATCTGATATATATACACATAAATATAGTCTGAATTTCTGATACGCATCCATGAATCTGTCAGAGACGAGATAAGAGTTAGTTGGACTGGCCTGTTTTGCATGTTCCTTTGCCAATTTTTATCTCTTGTTTCTATCTGTTTTCACATAACCCCAGGGCTGATAATTCAGTCATAATTGGTTAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTANGGGCAGGGTT]
[+] EMBL CB673006 [ACTCTTGCCTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGGTATGTCAATAATCTGATATATATACACATAAATATAGTCTGAATTTCTGATACGCATCCATGAATCTGTCAGAGACGAGATAAGAGTTAGTTGGACTGGCCTGTTTTGCATGTTCCTTTGCCAATTTTTATCTCTTGTTTCTATCTGTTTTCACATAACCCCAGGGCTGATAATTCAGTCATAATTGGTTAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTANGGGCAGGGTT]
[+] EMBL CB641237 [ TCTGATACGCATCCATGAATCTGTCAGAGACGAGATAAGAGTTAGTTGGACTGGCCTGTTTTGCATGTTCCTTTGCCAATTTTTATCTCTTGTTTCTATCTGTTTTCACATAACCCCAGGGCTGATAATTCAATCATAATTGGTTAGACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAATAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGTGGGCCTGGCTGCTCTAGCATCTCTGGC ]
consensusID : consensus_12460#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 723 fasta sequence
[ACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTCTAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGATATTCCGTGGATGCGTGCTAAAAGTGTTGCTTTATACAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATCCACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTACACTTACACTTGCAATTGACGAAAGGATACATTGCTGGAAATCCAGTGACAGATTACAAGATTGATGAAGATGGTAGA]
[+] EMBL CB655221 [ACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGGCGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCTTCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCCTGCCCGGGTTCGACGGCCCATTGCCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAACGAGAGCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATCTAGACCCACTTTTGCTCTGGCTAACAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGGATTGCCCATAATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTGTGGATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTCTAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGATATTCCGTGGATGCGTGCTAAAAGTGTTGCTTTATACAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATCCACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTACACTTACACTTGCAATTGACGAAAGGATACATTGCTGGAAATCCAGTGACAGATTACAAGATTGATGAAGATGGTAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ACTCTTGCCTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGTGAAGAAAGTAAAATAA 60
consensus_12460#0 ------------------------------------------------------------
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 GTGGATCATTCCGAAGAGTAAGTGATCCTAAGATCTGTGCGCAGGTATGTCAATAATCTG 120
consensus_12460#0 ------------------------------------------------GGTTCCCACTAT 12
consensus_12460#1 ---------------------------------CGATTGCACAAAGGACATCTCCAGGGG 27
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ATATATATACACATAAATATAGTCTGAATTTCTGATACGCATCCATGAATCTGTCAGAGA 180
consensus_12460#0 ATGGGTTTGTATAACTATATAAAAGATATACATAGCGCTGAGCTCTAGCTGCCGAAACTA 72
consensus_12460#1 ACACATTCTTGAGCCATTATGTGAAGAACTCCAGAGCCCCATCCATAACAATGCAGCGAG 87
consensus_12460#2 ----------------ACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGT 44
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 CGAGATAA-GAGTTAGTTGGACTGGCCTGTTTTGCATGTTCCTTTGCCAATT--TTTATC 237
consensus_12460#0 GAGGACACCGAGTTCTACTCTTGCGTATATTAGGAGTGCTGTTTTTCCGATCGATCAAGT 132
consensus_12460#1 AGATGTAATGAGTAGGCTCATGCTGGAGTCTCGTCCTGCTGC--TGCCGATG-ATGACAT 144
consensus_12460#2 GAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTG-ATCCTAAGATCTGTGCGCA 103
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 TCTTGTTTCTATCTGTTTTCACATAACCCCAGGGCTGATA-ATTCAGTCATAATTGGTTA 296
consensus_12460#0 GAAGAAAGTAAAATAAGTGGATCATTCCGAAGAGTAAGTG-ATCCTAAGATCTGTGCGCA 191
consensus_12460#1 TATTATATTTGAGTGTAGAAAAGCTTCCCACGTGTTATTATAAATATGGGCAAATGATGA 204
consensus_12460#2 GACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGG 163
consensus_12460#4 -ACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGG 59
consensus_12460#3 GACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGG 356
consensus_12460#0 GACGAAACGGGAAACAAACCATTCGATCGACGATGCGAGAGGAAGCGCGCACGATGGTGG 251
consensus_12460#1 AACAGTAAGGGAGAGTCTTGGTGTGCAAAAGGGAAC-AGTTGGAGAGTGGA-AATGATGC 262
** * **** * * * * * * ** * ** * * * *** **
consensus_12460#2 CGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCT 223
consensus_12460#4 CGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCT 119
consensus_12460#3 CGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCT 416
consensus_12460#0 CGACGAGAAGCACCACCAGCCGCCGTTGCTTGACGTGGTGGTGGCTCGCCTGCTGCTGCT 311
consensus_12460#1 ATTCGCGATATAGATTCCAATAGCGATGTCCGTAGTACAGTGGAATTATCATTTGACGTT 322
** ** * * ** ** * ** * * * * ** * *
consensus_12460#2 TCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCC 283
consensus_12460#4 TCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCC 179
consensus_12460#3 TCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCC 476
consensus_12460#0 TCGTTTCTTGGGTGGCCTCGTCGTCGTGGACGGCGGCGGCCTGTGTCGCCGTGTCGAGCC 371
consensus_12460#1 AATGAGAAAGGGATACCGAGCAATCATATACAGCGGTGATCATGATTGTAGAGTTCCCTC 382
*** ** * ** * ** **** * * * * * ** *
consensus_12460#2 TGCCCGGGTTCGACGGCCCATTG--CCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAA 341
consensus_12460#4 TGCCCGGGTTCGACGGCCCATTG--CCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAA 237
consensus_12460#3 TGCCCGGGTTCGACGGCCCATTG--CCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAA 534
consensus_12460#0 TGCCCGGGTTCGACGGCCCATTG--CCATTCTCCCTCGAAACCGGGTACGTGGAAGTGAA 429
consensus_12460#1 CATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCTATTGATGATG-ATTGGCGGC 441
* * * *** * * *** * * * * * *
consensus_12460#2 CGAGA-GCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATC 400
consensus_12460#4 CGAGA-GCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATC 296
consensus_12460#3 CGAGA-GCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATC 593
consensus_12460#0 CGAGA-GCACTGGCGTGCAGCTCTTCTACTACTTTGTCCGGTCAGAGAAGAATCCTGATC 488
consensus_12460#1 CGTGGTACGTTGATGGACAAGTTGCCGGATTCACGGGAAGCTTTGTGAGTAATACCATGA 501
** * * ** * ** * * * * * * * * ** *** *
consensus_12460#2 TAGACCCACTTTTGC------TCTGGCTAACAG--GTGGGCCTGGCTGCTCTAGCATCTC 452
consensus_12460#4 TAGACCCACTTTTGC------TCTGGCTAACAG--G------------------------ 324
consensus_12460#3 TAGACCCACTTTTGC------TCTGGCTAACAG--GTGGGCCTGGCTGCTCTAGCATCTC 645
consensus_12460#0 TAGACCCACTTTTGC------TCTGGCTAACAG--GTGGGCCTGGCTGCTCTAGCATCTC 540
consensus_12460#1 CATACGCATCTTTGAAGGGCGTTGGGCATACTGTTGCAGAGTATAATCCCAAGGAGTGTC 561
* ** ** **** * *** ** * *
consensus_12460#2 TGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGG 512
consensus_12460#4 ---------------------GCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGG 363
consensus_12460#3 TGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGG 705
consensus_12460#0 TGGCCTAGCCCATGAGATAGGGCCATTTCAATTCGCTGCAAAACGATACTATAGTGGAGG 600
consensus_12460#1 ATGAGATGTTCGCAAGATGGATTTCAGGCACTCCTCTTTGACGT-ATATTGTTCAAGTCA 620
** * * ** * *** * * *
consensus_12460#2 ATTGCCCATA-ATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTG 571
consensus_12460#4 ATTGCCCATA-ATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTG 422
consensus_12460#3 ATTGCCCATA-ATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTG 764
consensus_12460#0 ATTGCCCATA-ATTATCTACCGACCAGAGACATGGACTAAGGTAAGCAATATAATCTTTG 659
consensus_12460#1 CCGGTAAAAACATAATCAAACGATCAT--ATGAGAGGTAAAATAAA-GATTTGCTGCTTG 677
* * * ** *** * *** ** * * *** *** ** * * ***
consensus_12460#2 TGG--ATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTC 629
consensus_12460#4 TGG--ATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTC 480
consensus_12460#3 TGG--ATTCTCCTGTANGGGCAGGGTT--------------------------------- 789
consensus_12460#0 TGG--ATTCTCCTGTAGGGGCAGGGTTCTCATATGCAGCCACAGAGGAGGGTTCCAAGTC 717
consensus_12460#1 TAATAATTACTCCGTTCGGGCTGATAATACTTGTCGTTTTGGACAAGAGTGAAGTTAAAC 737
* *** * ** **** *
consensus_12460#2 TAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGATATTCCGTGGATG 689
consensus_12460#4 TAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGATATTCCGTGGATG 540
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 TAGTGATACCAATGCTGTGAAACAACTTCTAATTTTCCTTAGAAAGTGGCTTCATGACCA 777
consensus_12460#1 TCTAGAATCTTTGATTATGAATCATTTTAAAAATATTTGTCTTCCAA-ATATGATGACTA 796
consensus_12460#2 CGTGCTAAAAGTGTTGCTTTATACAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATC 749
consensus_12460#4 CGTGCTAAAAGTGTTGCTTTATACAGTGGCTTCATGACCATCCCCGGTTCTCACTGAATC 600
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 TCCCCGGTTCTCACTGAATC-CACTCTATATTGGAGGTGACTCATATAGTGGAATGATTG 836
consensus_12460#1 CATGTATAGATTA--GTCTTAAAAAATACTTTAATAAGATCATATATTTGCTAAAAAAA- 853
consensus_12460#2 CACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTA--------------- 794
consensus_12460#4 CACTCTATATTGGAGGTGACTCATATAGTGGAATGATTGTACCTACACTTACACTTGCAA 660
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 TACCTACACTTACACTTGCAATTGACGAAAGCAATGGTTCAGAAGAAAAACCATTTTTTA 896
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 TTGACGAAAGGATACATTGCTGGAAATCCAGTGACAGATTACAAGATTGATGAAGATGGT 720
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 ATCTC-AAGGGATACATTGCTGGAAATCCAGTGACAGATTACAAGATTGATGAAGATGGT 955
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 AGA--------------------------------------------------------- 723
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 AGAATTCCATTTCTGCATGGCATGGGACTTATATCTGATGAACTTTACGAACATGCAAAG 1015
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 GAGACCTGCGGAGAAAAATACAGTGCTCCGAGCAATGCTCAATGTGCGCATTCCGTCCAA 1075
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 GCAATAAACGATGACATCAACAGGGGACACATTCTTGAGCCATTATGTGAAGAACTCCAG 1135
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 AGCCCCATCCATAACACTGCAGCGAGAGATGTAATGAGTAGGCTCATGCTGGAGTCTCGT 1195
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 CCTGCTGCTGCCGATGATGACATTATTATATTTGAGTGTAGAAAAGCTTCCCACGTGTTA 1255
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 TTAAAAATATGGGCAAATGATGAAACAGTAAGGGAGAGTCTTGGTGTGCAAAAGGGAACA 1315
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 GTTGGAGAGTGGAAACGATGCAATCGCGATATAGATTACAATAGCGATGTCCGTAGTACA 1375
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 GTGGAATATCATTTGACGCTAATGAGAAAGGGATACCGAGCAATCATATACAGCGGTGAT 1435
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 CATGATTCTAGAGTTCCCTCCATTAGCACACAAGCATGGATTAGATTACTTAACCTTTCT 1495
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 ATTGCTGATGATTGGCGACCGTGGTACGTTGATGGACAAGTTGCCGGATTCACACGAAGC 1555
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 TTTGCGAGTAATAACCTGACATACGCAACTGTGAAGGGCGCTGGGCATACTGCTGCAGAG 1615
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 TATAAACCCAAGGAGTGTCAAGAGATGTTTGCAAGATGGATTTCAGGCACTCCTCTCTGA 1675
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 CGTATATTGTTCAAGTCACCTGTAAAAACATAATCAAACGATCATATGAGAGGTAAAATA 1735
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 AAGATTTGCTGCTTGTAATAATTACTCCGTTCGGGCTGATAATACTTGTCGTTTTGGACA 1795
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ------------------------------------------------------------
consensus_12460#4 ------------------------------------------------------------
consensus_12460#3 ------------------------------------------------------------
consensus_12460#0 AGAGTGAAGTTAAACTCTAGAATCTTTGATTATGAATCATTTTAAAAAAAAAAAAAAAAA 1855
consensus_12460#1 ------------------------------------------------------------
consensus_12460#2 ----
consensus_12460#4 ----
consensus_12460#3 ----
consensus_12460#0 ACTC 1859
consensus_12460#1 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||